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MS022520 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTGAGAAATTGAGATGTGGGGCAGGGGCACTATGGTTGTTGGTAGCAGTACTGCCGGGGTTTAGGAAGGGGAAGGGTGAGAGAGAGGAAGAGGGAGATGGAGGTGATGAGGGAAGCGGGTGCATATCCATATCCATATCATCGAGGAGAGTTTCTCTGGAAAAATTCGAATGCGGTTCATGGGCTTCGTCGGGCATGGTGGTTCATGAGGACAATGAGGAAAGTGGGAGCCTCTATTTTGATCTGCCAATAGAGTTGATAAGGAACAGCGTCAGCGTCAGCGTGGGCGCACAATCACCAGTAAAAGCCGCTTTTGTATTCGACAAAGCAAAATTAGCTGCCGCCGCCGCCGCCTCGTCAGTATCAGTACGTGCATCTGCCCCGCCCACACCAACTTCATCTTCAATCGTCATTACCCCACGCTTGCGCAAAGCTAGGGAAGAGTTCAATGCACTTCTGGAAGCGCATACTACTACTCTC GGTGAGAAATTGAGATGTGGGGCAGGGGCACTATGGTTGTTGGTAGCAGTACTGCCGGGGTTTAGGAAGGGGAAGGGTGAGAGAGAGGAAGAGGGAGATGGAGGTGATGAGGGAAGCGGGTGCATATCCATATCCATATCATCGAGGAGAGTTTCTCTGGAAAAATTCGAATGCGGTTCATGGGCTTCGTCGGGCATGGTGGTTCATGAGGACAATGAGGAAAGTGGGAGCCTCTATTTTGATCTGCCAATAGAGTTGATAAGGAACAGCGTCAGCGTCAGCGTGGGCGCACAATCACCAGTAAAAGCCGCTTTTGTATTCGACAAAGCAAAATTAGCTGCCGCCGCCGCCGCCTCGTCAGTATCAGTACGTGCATCTGCCCCGCCCACACCAACTTCATCTTCAATCGTCATTACCCCACGCTTGCGCAAAGCTAGGGAAGAGTTCAATGCACTTCTGGAAGCGCATACTACTACTCTC GGTGAGAAATTGAGATGTGGGGCAGGGGCACTATGGTTGTTGGTAGCAGTACTGCCGGGGTTTAGGAAGGGGAAGGGTGAGAGAGAGGAAGAGGGAGATGGAGGTGATGAGGGAAGCGGGTGCATATCCATATCCATATCATCGAGGAGAGTTTCTCTGGAAAAATTCGAATGCGGTTCATGGGCTTCGTCGGGCATGGTGGTTCATGAGGACAATGAGGAAAGTGGGAGCCTCTATTTTGATCTGCCAATAGAGTTGATAAGGAACAGCGTCAGCGTCAGCGTGGGCGCACAATCACCAGTAAAAGCCGCTTTTGTATTCGACAAAGCAAAATTAGCTGCCGCCGCCGCCGCCTCGTCAGTATCAGTACGTGCATCTGCCCCGCCCACACCAACTTCATCTTCAATCGTCATTACCCCACGCTTGCGCAAAGCTAGGGAAGAGTTCAATGCACTTCTGGAAGCGCATACTACTACTCTC GEKLRCGAGALWLLVAVLPGFRKGKGEREEEGDGGDEGSGCISISISSRRVSLEKFECGSWASSGMVVHEDNEESGSLYFDLPIELIRNSVSVSVGAQSPVKAAFVFDKAKLAAAAAASSVSVRASAPPTPTSSSIVITPRLRKAREEFNALLEAHTTTL Homology
BLAST of MS022520 vs. NCBI nr
Match: XP_022146694.1 (uncharacterized protein LOC111015837 [Momordica charantia]) HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of MS022520 vs. NCBI nr
Match: XP_011658372.1 (uncharacterized protein LOC105435976 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32 Identity = 102/169 (60.36%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of MS022520 vs. NCBI nr
Match: XP_022978627.1 (uncharacterized protein LOC111478548 [Cucurbita maxima]) HSP 1 Score: 148.7 bits (374), Expect = 4.4e-32 Identity = 94/163 (57.67%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of MS022520 vs. NCBI nr
Match: XP_023543164.1 (uncharacterized protein LOC111803119 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 148.3 bits (373), Expect = 5.7e-32 Identity = 94/163 (57.67%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of MS022520 vs. NCBI nr
Match: KAA0052411.1 (ycf3-interacting protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 147.9 bits (372), Expect = 7.5e-32 Identity = 101/169 (59.76%), Postives = 116/169 (68.64%), Query Frame = 0
BLAST of MS022520 vs. ExPASy TrEMBL
Match: A0A6J1CYT9 (uncharacterized protein LOC111015837 OS=Momordica charantia OX=3673 GN=LOC111015837 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 5.1e-79 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of MS022520 vs. ExPASy TrEMBL
Match: A0A6J1ILL2 (uncharacterized protein LOC111478548 OS=Cucurbita maxima OX=3661 GN=LOC111478548 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 2.1e-32 Identity = 94/163 (57.67%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of MS022520 vs. ExPASy TrEMBL
Match: A0A0A0KME4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538760 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 2.1e-32 Identity = 102/169 (60.36%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of MS022520 vs. ExPASy TrEMBL
Match: A0A5A7UFW0 (Ycf3-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00060 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32 Identity = 101/169 (59.76%), Postives = 116/169 (68.64%), Query Frame = 0
BLAST of MS022520 vs. ExPASy TrEMBL
Match: A0A6J1EGQ7 (uncharacterized protein LOC111433224 OS=Cucurbita moschata OX=3662 GN=LOC111433224 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 93/163 (57.06%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of MS022520 vs. TAIR 10
Match: AT4G20190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44660.1); Has 271 Blast hits to 209 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 63; Fungi - 14; Plants - 48; Viruses - 3; Other Eukaryotes - 128 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 2.8e-13 Identity = 64/174 (36.78%), Postives = 87/174 (50.00%), Query Frame = 0
BLAST of MS022520 vs. TAIR 10
Match: AT1G30850.1 (root hair specific 4 ) HSP 1 Score: 65.1 bits (157), Expect = 5.9e-11 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0
BLAST of MS022520 vs. TAIR 10
Match: AT5G44660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits to 462 proteins in 141 species: Archae - 2; Bacteria - 370; Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other Eukaryotes - 239 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 6.5e-10 Identity = 63/194 (32.47%), Postives = 85/194 (43.81%), Query Frame = 0
BLAST of MS022520 vs. TAIR 10
Match: AT2G34910.1 (BEST Arabidopsis thaliana protein match is: root hair specific 4 (TAIR:AT1G30850.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09 Identity = 60/180 (33.33%), Postives = 78/180 (43.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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