MS022467 (gene) Bitter gourd (TR) v1

Overview


Name	MS022467
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L11
Location	scaffold47: 3623542 .. 3629986 (-)
RNA-Seq Expression	MS022467
Synteny	MS022467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATGGTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTCGGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGGTAAAATTTCTATGATCTATATCTTCTTCTCTCTTCACCATTCTCACAACAGTTTATGATGACTTCAACTCCAATCCAATTTCATCCCTTTCTCATGATAGACAGTGTGAAATCTGTGGTCAGACTGCAACAAACGTAAGGGGAATCAGGAGCGGCGGTTTCATGATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACAGTCTCCACAGTGTCCTTGGACAGCGACGATTCACTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCTTATTAACATGCACAGTTCTAGCCTTCCTCCTCCCATGGTTCTTTCGTCTTGATTTCTTTGGATGATGAGTGATGACTTTTCTCGGACATCCCATCATCAAATAAACCAGAAATGAAGTGCCTGACCCATGCTACTGAGGACCTGGGAATAAGGAAAAACAACAGTTTCACACGGAGGAATTGACAGATATATATGTAGTTCTCGCATACTGTCTCTAAATAAATCAGCAGAAGAGAGATCAAAGCCAAACAAACTAGTTCTATAGAAAAGTATAAATGAGAAACGACATTCAGAACCATACAGGCCTGAATGACATGTAATATTCATTTTTCACTAGAAAATTTCACAAATGCAATCTTTACAGGTTGGTGGCTGACATGACATTCACGTTCCTCACAAACAATGCAAGCAAAATGAGAATAATTGGCTAGTACTCCTGAGAGAGAGATCACAATGCAAAATAAATAAATGGTTTTAATTCACTAAGCTAATTACTTTTTCCACATTAAAAATTTACTATTCTAAGGAACGTCTTAGTCGAGTTCTCGAACAAATAAGACGTGCACCAAGTGTAGAGACCACTAGGAAAACCTTGACAAAGTGGATCCAGCTTTCAAGCTTCTACCCATAGTTACCTTGCATCCTAATGAATATTTATATTACAATTCAATAAGTTAGTCAGTTTCAGAATAATTGAAATTTTTGTTGCACTCACGATGTTTTTCTAGAATATTGCTAAAGAGGAAAAAAGTAAGAAGTTAAAGACAAATAAAAGAATATACAATACTCCTGTCTGATTCACAAAATCGCATATATGATCTCAGAAATTAAATGAAGATGTTATGCTGAAGCCTGCAATAACTAAAGAATAAGATTGTAAATTATGAAAGGTATTGTTTAACATTTTTCTTTTATAGAATATAATAGCAAGCATAGTATTTCAAGTCGAGAAAATATACCAAACTCTAGAAATTTCCCCTATTCACGTCCTCCTTGATATAAATAGCATTAACAATGAGCAAACAATACTCGTGTCTGATTTAAAAAGAATGATGATAAATAAAAGCAAAAATGTAAATACATGTGCGTAAACAGAAAAGTTCTCAATCTGAATTTGTAAGAGGAGCTGGAGGCCATAAGATTATCCACAAACCACTCTCAAGAACATGCTGAAATTTTTGCAGTATGATGTGATAAAATAAACCTGCTGACACAAAAGCAAAATTCAACCACTTGTCCACAGGTGGGATCCTTGACTTTCCAAAATAACATACAAATAAAAGAAGTAGAATCACATATGACATTGCTTTACCTGGATGTCCAACCAAAGCAACTAAGGACTTGTAGTCAGCTTTGAACAAGGTCAACAGGACCGATATGCCCTTCCAGAAACTGCATCAGTTTAAGTGTTTGATAAAGGCAGAGTCCACCAATCAAACACATCCCATATAATTTTCAAATACATAACTCAGTTTCCATGATACCATTTTCGGTGATAGCCAATCAATGTCCTGAGATCTTCAAAACATTCGTAGTGTTAAAGTTAAATATCTTAACAGTGAAGCATGCAGCTGAAGGGCGAACTAATGACACTTGATGCTTGCATTACCCTTGAACCAAATCATTTGGTTTCCAAAGTTAAAGCCATTTTTGGATCTGGTATAGCATTCAAATTCAGGCAGTCAATGAAAGAGCCGAGCCAGATGTAACTTTGATTTAAGCTTCCTCGCTTCACTTGTAAATCCTGAAGAACAAAGACCATCAATAACTGCTCGTTGTGTGGACTTAAGAACTTTCATGCCACCTCTTATACACGAAAGCAATAACTTTGATGCACAACGGAATCTCCTCGCCTTGCAAAGATTGTGCACCAAAGAGGTGTAGGTAAAAGAATCCCTTGTTTCCATTGATTCAAACAATTTCATTGCATGGTCAATTTGTCCAGCCTTACACAACCGGTCAATTAGACAATTTAAGGGTACCAAGTTTGAAGCTAAGCCTGTTGTATACATGTAATTCAAATGTCGCCGGGCCCCATCAATATTCCCAGCCCGGCACAGCCCATCAGTTATTATAGTATGTGTGTAGTTGTCAAATTCTAGTCCCCGCGACTCAATCTCATCCAACAACTTATATGCTGCATCCAACTTACCCTCTTTACAGTACAAATGAATAAATGTGTTATAAAAAACTAAATCAATCCCCACGCCATTCCTTATCATTTGTTCCATGCAAACATTTGCCTCTTCGAACCTACCCAACTTTAAAAAAGCACCAATAACCGTGCAGTAAGCAAAGCCATCAAAAGCATATCCTTTGTTCTTCATCTCAAAGAAAATCTCAAATCCATGTTTATATTGCCTAGATCTAAGGCAGCTTTTCATTAATGTAGTGTATGTTATAGCATCAGGCTCAAGACCCGAATCCCTGGCCTCATTGAGCATCCTTCTAGCAGCCTTCAACCTACCCACCTTGCAAAGACCATTAATAAGAATATTATATGTAACTAATTGAGGAACAAATCCATGGCGTTGTAAATTTCTGAACAACATTATGGCATTGCTTGTATATCCATATTTACAAAGGCCATTAATCATTGTATTAAACGTAACCGGATGAGGAGAGAGGTCTTTAAGTATAATATCCTTGAAAACTCTATTGGCTTCGTCCGGCTTTCCTAATCTGAAGAAACAATGCATCAAAGTGTTGTAACTCCATATATCAGGAGTGATACCTGATTGAAGCATTTCTTCGAACAGATCAAGGGACTGTTCCAATGAGCAATTCCTGGTTGCCCCAGCTATCAAAGAATTGTAAGTAATGACATCTGGGCTTATACCAGCTTCTCTCATTCTATAAATAACAGAATAAGCCGCATCCATGCCGATAAACCGACAATATCCATCAAGCAACGTATTGTAAGTCACTACATCCGGGAGAACTCCTAAACGTATACCATCTATTATGACAGCTTCAGCTTTCTGCATTTGCCGAGATTTACAATATGAGGCGACACAAATATTCAAAAACTTTGTGGAGAATTTACAGACCATTCTTCAAACTGCCCTTGGGATTTTAAAAAACCTGCCAATCCAGTAAGTCAACAAGAGAATAATCATTTTGCACATAAAAATATGAAAACGCTTAAATAAGACCATTGAAGCAAAGAAACAGTTATATCGAAGCGATAATGTGAAAGGCAATCCTAACCGGAAAAACAACCAGAAACTTCAATAACTCATGATAATCATGGTGAGACCTCAAAAGACATGGAAGTTCAGGAAGACGAAATCCAGCTTGACTCTAATCCGGAAAAATGAGCATTTTCACCAAATTAAATCAAACGATCGGTGCCTTAATTAAATTAAATGAAAACACAATCCACTTCCGCGAAATTATTACTGGGATTAGCAAATAACAGCAATAATACAAGAGAAAACTTACTCGTCGGGATTTACCAGTACGAAACGCAAGAAATTTCACTGTTCTTACGAATGCAATAAGTAATTGCCACCAAACCTTTGGAGAAATGTAGAAAAACAAGAGTATTCGGTGAAATATGTCACCTCTCGCAGCTTCTGCTCGTCGCTCAGATCATAAATGGAGTCGCAGATGGGCGTTTCCTACTTTCCTCCCACTTCTAGCGGATGGCTGATGACATTGGCAATGTACAAATTTCCATTCGCGAAGTAGCCAACAAGACTTGAATTGGATGGCGTCAGTGGAGAAATGGAATTCGGGAATCGAAGGCGATTTTGAAACAATTATTTAAAAGTTGATTGTTCTGGTCGTGCAGATTAAGTTAGAAATAAAAATCGAAGTATTATTTGTCCAAAAAACAATTAAAAAAAGAGAGAGAGAGAAAAGAGAAAACTCTTCTTTTTAAGATTTTCTAAAAAAATGGTTTGTGATATATATATTTTCTTAGATGAGCTCAAAAGTAATGGTATAATTGAGTTCAAATTTTTCCATCTCTAAATAAATATTTTTTATTATTTTTTTAAATCTTGGACATACGAATATTTTAAAAAGAAAAATGATAGTAAAAATGCAAGGTTCATTATCTTGACAGATTGTCTTTCATGGCGAAACAATTTGGGCATCATTATTAAGCTTTTTTTTTCTTTGAACTTTGTTTTTGAATAAGTTTGGTCTTGATATTTTTTATTTAAAATTTATAACTAGTAATACTAGAAAAATTATACATTTTTGCCACCTATTAAAAAATATAATTTCACAATTTTGACGATGTGGGCTATTTACGAAATTTCACAAATTTAATAGCAATCTTGTAGGCCCACAATTTAAGCCCATAACCTCCGAACTTGAAATCCTAGCTTCTTCTACTTTGGAGGCCCACAATTTAAGCCCATAACCTCCGAATTTGAAACCCTAGCTTCTTCTACTTCAACCCATATTAGGGTTTCTTCGCCCCTCCCTCGGATTGAGAAGCAGTAGCAGGAACAGCGCAACAGCCGCAGCCGCCCGCTAGGATTCCCCAATGGTGGTTTCTCCGATTCGTGTTTTTCTCTCCCATTAGATTGTTAAAACTTCTATAATTGTGTTTTATTCCTGCTCCCTAATCCTCTGCATCTGTTAATATGGCGCAGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTAGTACAAACTTCACCGAGTTCTGTGCATTTTGTCTGCTGATTTGGTTGCTTCTAGTTTTTGTTTCCGCGATTTATAGTTCACTTTTCTTAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGGTACAACTTTTTTTTCCTCATCTCGTACCCGCTTGATTAAGACTACAAAATGGTTCGGATGAAAACGAGTAAATATATATTTGAAGAGAAATCTAGAGTCGCACCTTAGGGCTGATTAATCGTGGGATTTAGGTTTATGAGATGCAAAACTACTTATTTCGAGTTTATGATTTTATGATTCAGAACTGGAAATAAAGTTATCTTTGAAAGTCATATCACAATATTGGATCTGATAGAATAATTTGTTGGTGGGTTTTTTCTCTCTTGTGAACAATAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTAAGTTTAAGCCCAAACCCATCTGAATCTCCCTTCAATTATGTTCAAATTTTTTGTCTGAAACTTACTGCCATGTGATCAATTTCCTCAGAGATCTGTAGTCTAATTTGCTTAGGTGATTCTGTTTTGATTTGTATGCCAAAATAGTTATATTCAAATGCAACATTCATTGGGTTGAGGTATTTGTCAATGTTAAATATTTGATTAAGTATGACAACTTTTGCTGCCCAAAGGAGATGGTGATCGAAATTCCCGGTAGTTTTGGAAACAGGGAACAGGATCCCTAATCCCTGTCCTAACTGATGTGCTTGTCGGGATTGAAATGATCTGGAAGGACGGGAATAGGGGAGGGAGGGACATTCCTGACCCTTCATGAGTGATGGCATCTCTATCTATGAAGTTTACCTTTAAACAATCTTGTTTGTTTATGTGCTATGGTATGACATTTCAGGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACT

mRNA sequence

ATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATGGTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTCGGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGACAGTGTGAAATCTGTGGTCAGACTGCAACAAACGTAAGGGGAATCAGGAGCGGCGGTTTCATGATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACAGTCTCCACAGTGTCCTTGGACAGCGACGATTCACTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCTTATTAACATGCACAGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTAGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACT

Coding sequence (CDS)

ATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATGGTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTCGGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGACAGTGTGAAATCTGTGGTCAGACTGCAACAAACGTAAGGGGAATCAGGAGCGGCGGTTTCATGATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACAGTCTCCACAGTGTCCTTGGACAGCGACGATTCACTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCTTATTAACATGCACAGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTAGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACT

Protein sequence

IIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT

Homology

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BLAST of MS022467 vs. NCBI nr
Match: OMO65429.1 (Ribosomal protein L5 [Corchorus olitorius])

HSP 1 Score: 467.6 bits (1202), Expect = 8.2e-128
Identity = 245/324 (75.62%), Postives = 265/324 (81.79%), Query Frame = 0


Query: 1   IIDIKSSG----ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQLGCRC 60
           +IDIK SG    +  +G D   EKVCRICHL++E QS+ S           DLI+LGC C
Sbjct: 202 VIDIKGSGGGGKQFKEGWDG--EKVCRICHLNTE-QSLESTESTSNSEATMDLIELGCAC 261

Query: 61  KDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTV 120
           KDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      + S V
Sbjct: 262 KDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GSTSIV 321

Query: 121 SLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAK 180
            + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAK
Sbjct: 322 GISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAK 381

Query: 181 VVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 240
            VLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR
Sbjct: 382 -VLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 441

Query: 241 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRV 300
           NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQHRV
Sbjct: 442 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQHRV 501

Query: 301 TKEDAMKWFQVKYEGVILNKSQAI 310
           TKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 502 TKEDAMKWFQVKYEGVILNKSQNI 516

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BLAST of MS022467 vs. NCBI nr
Match: OMO76145.1 (Ribosomal protein L5 [Corchorus capsularis])

HSP 1 Score: 466.5 bits (1199), Expect = 1.8e-127
Identity = 244/324 (75.31%), Postives = 265/324 (81.79%), Query Frame = 0


Query: 1   IIDIKSSG----ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQLGCRC 60
           +IDIK SG    +  +G D   EKVCRICHL++E QS+ S           DLI+LGC C
Sbjct: 194 VIDIKGSGGGGRQFKEGWDG--EKVCRICHLNTE-QSLESTDSTSNNEATMDLIELGCAC 253

Query: 61  KDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTV 120
           KDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      + S V
Sbjct: 254 KDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GSTSIV 313

Query: 121 SLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAK 180
            + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAK
Sbjct: 314 GISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAK 373

Query: 181 VVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 240
            VLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR
Sbjct: 374 -VLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 433

Query: 241 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRV 300
           NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQHRV
Sbjct: 434 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQHRV 493

Query: 301 TKEDAMKWFQVKYEGVILNKSQAI 310
           TKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 494 TKEDAMKWFQVKYEGVILNKSQNI 508

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BLAST of MS022467 vs. NCBI nr
Match: RXH99070.1 (hypothetical protein DVH24_011395 [Malus domestica])

HSP 1 Score: 459.1 bits (1180), Expect = 2.9e-125
Identity = 235/321 (73.21%), Postives = 259/321 (80.69%), Query Frame = 0


Query: 1   IIDIKSSGESVDGEDSSEEKVCRICHLSSE----------HQSIASDLIQLGCRCKDELG 60
           +ID+KS      G+    E+VCRICHL S+          + SI +DLI LGC CKDELG
Sbjct: 153 VIDMKSGSGRGFGDRWDGERVCRICHLGSDISPERKMETANSSITADLINLGCGCKDELG 212

Query: 61  ISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSD 120
           ++H  CAE WF  RGNR CEICG+TA N+ G    GFM   +E      +T++ +  +S 
Sbjct: 213 VAHGHCAEAWFRLRGNRTCEICGETAQNITGHGDNGFMEDWHE------ATLADIGNNSS 272

Query: 121 DSLSCCW-GQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLE 180
           +    CW  Q FCNFL+ C ASE KL+NPMR+IKVQKLVLNISVGESGDRLTRAAK VLE
Sbjct: 273 ERNVSCWRRQPFCNFLMACLASENKLANPMREIKVQKLVLNISVGESGDRLTRAAK-VLE 332

Query: 181 QLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSD 240
           QLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSD
Sbjct: 333 QLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSD 392

Query: 241 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKED 300
           TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTKED
Sbjct: 393 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKED 452

Query: 301 AMKWFQVKYEGVILNKSQAIT 311
           AMKWFQVKYEGVILNKSQ IT
Sbjct: 453 AMKWFQVKYEGVILNKSQNIT 466

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BLAST of MS022467 vs. NCBI nr
Match: KAF5752812.1 (60S ribosomal protein L11 [Tripterygium wilfordii])

HSP 1 Score: 453.0 bits (1164), Expect = 2.1e-123
Identity = 237/327 (72.48%), Postives = 255/327 (77.98%), Query Frame = 0


Query: 2   IDIKSSGESVDG---EDSSEEKVCRICHLSSEHQ---------------SIASDLIQLGC 61
           ID+K       G   E    EKVCRICHLS+E                 S + DLIQLGC
Sbjct: 137 IDVKHGDGGGGGGIKEKCDGEKVCRICHLSTEGSLENTVATMTTNAHMTSTSMDLIQLGC 196

Query: 62  RCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVS 121
            CKDELGI+H  CAE WF  +GNR CEICGQTA N+ G+    FM + NE+R   +    
Sbjct: 197 GCKDELGIAHVHCAEAWFKLKGNRLCEICGQTAKNITGVGDNRFMEEWNEQRYARNYN-- 256

Query: 122 TVSLDSDDSLSCCW-GQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTR 181
                S +    CW G  FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTR
Sbjct: 257 ----SSSERREGCWRGPPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLTR 316

Query: 182 AAKVVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 241
           AAK VLEQLSGQ+PV+SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL
Sbjct: 317 AAK-VLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 376

Query: 242 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQ 301
           LR+NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVGIQ
Sbjct: 377 LRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQ 436

Query: 302 HRVTKEDAMKWFQVKYEGVILNKSQAI 310
           HRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 437 HRVTKDDAMKWFQVKYEGVILNKSQNI 456

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BLAST of MS022467 vs. NCBI nr
Match: RXH86308.1 (hypothetical protein DVH24_017361 [Malus domestica])

HSP 1 Score: 447.6 bits (1150), Expect = 8.8e-122
Identity = 231/330 (70.00%), Postives = 260/330 (78.79%), Query Frame = 0


Query: 3   DIKSSGESVDGEDSSEEKVCRICHLSSE----------HQSIASDLIQLGCRCKDELGIS 62
           D+K       G     E+VCRICHL+S+          + SI +DLIQLGC CKDELG++
Sbjct: 164 DMKCGSGRGFGNKWDGERVCRICHLNSDISPPRKMGTANSSITADLIQLGCGCKDELGVA 223

Query: 63  HRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSDDS 122
           H  CAE WF  +GNR CEICG+TA N+ G  +  FM + +E      +T++ +  +S + 
Sbjct: 224 HGHCAEAWFRVKGNRTCEICGETAQNITGHGNNRFMEEWHE------ATLADIGNNSSER 283

Query: 123 LSCCW-GQRFCNFLLTC-----------TASEKKLSNPMRDIKVQKLVLNISVGESGDRL 182
            + CW GQ FCNF++ C            ASE K++NPMR+IKVQKLVLNISVGESGDRL
Sbjct: 284 NASCWRGQPFCNFIMACLVIAFVLPWFFRASESKMANPMREIKVQKLVLNISVGESGDRL 343

Query: 183 TRAAKVVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY 242
           TRAAK VLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY
Sbjct: 344 TRAAK-VLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY 403

Query: 243 ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVG 302
           ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVG
Sbjct: 404 ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVG 463

Query: 303 IQHRVTKEDAMKWFQVKYEGVILNKSQAIT 311
           IQHRVTKED+MKWFQVKYEGVILNKSQ IT
Sbjct: 464 IQHRVTKEDSMKWFQVKYEGVILNKSQNIT 486

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BLAST of MS022467 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.3e-95
Identity = 174/180 (96.67%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAK VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQAI
Sbjct: 122 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180

[Close]

BLAST of MS022467 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 2.1e-94
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 2.1e-94
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 340.5 bits (872), Expect = 2.0e-92
Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+K VLEQLSGQSPVFSKARYTVRSFG
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQSPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+QA 
Sbjct: 122 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.0e-92
Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+K VLEQLSGQSPVFSKARYTVRSFG
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQSPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+QA 
Sbjct: 122 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. ExPASy TrEMBL
Match: A0A1R3H527 (Ribosomal protein L5 OS=Corchorus olitorius OX=93759 GN=COLO4_31259 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 4.0e-128
Identity = 245/324 (75.62%), Postives = 265/324 (81.79%), Query Frame = 0


Query: 1   IIDIKSSG----ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQLGCRC 60
           +IDIK SG    +  +G D   EKVCRICHL++E QS+ S           DLI+LGC C
Sbjct: 202 VIDIKGSGGGGKQFKEGWDG--EKVCRICHLNTE-QSLESTESTSNSEATMDLIELGCAC 261

Query: 61  KDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTV 120
           KDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      + S V
Sbjct: 262 KDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GSTSIV 321

Query: 121 SLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAK 180
            + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAK
Sbjct: 322 GISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAK 381

Query: 181 VVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 240
            VLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR
Sbjct: 382 -VLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 441

Query: 241 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRV 300
           NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQHRV
Sbjct: 442 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQHRV 501

Query: 301 TKEDAMKWFQVKYEGVILNKSQAI 310
           TKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 502 TKEDAMKWFQVKYEGVILNKSQNI 516

[Close]

BLAST of MS022467 vs. ExPASy TrEMBL
Match: A0A1R3I0M6 (Ribosomal protein L5 OS=Corchorus capsularis OX=210143 GN=CCACVL1_15847 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.9e-128
Identity = 244/324 (75.31%), Postives = 265/324 (81.79%), Query Frame = 0


Query: 1   IIDIKSSG----ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQLGCRC 60
           +IDIK SG    +  +G D   EKVCRICHL++E QS+ S           DLI+LGC C
Sbjct: 194 VIDIKGSGGGGRQFKEGWDG--EKVCRICHLNTE-QSLESTDSTSNNEATMDLIELGCAC 253

Query: 61  KDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTV 120
           KDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      + S V
Sbjct: 254 KDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GSTSIV 313

Query: 121 SLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAK 180
            + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAK
Sbjct: 314 GISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAK 373

Query: 181 VVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 240
            VLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR
Sbjct: 374 -VLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRR 433

Query: 241 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRV 300
           NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQHRV
Sbjct: 434 NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQHRV 493

Query: 301 TKEDAMKWFQVKYEGVILNKSQAI 310
           TKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 494 TKEDAMKWFQVKYEGVILNKSQNI 508

[Close]

BLAST of MS022467 vs. ExPASy TrEMBL
Match: A0A498JUC1 (RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_011395 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.4e-125
Identity = 235/321 (73.21%), Postives = 259/321 (80.69%), Query Frame = 0


Query: 1   IIDIKSSGESVDGEDSSEEKVCRICHLSSE----------HQSIASDLIQLGCRCKDELG 60
           +ID+KS      G+    E+VCRICHL S+          + SI +DLI LGC CKDELG
Sbjct: 153 VIDMKSGSGRGFGDRWDGERVCRICHLGSDISPERKMETANSSITADLINLGCGCKDELG 212

Query: 61  ISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSD 120
           ++H  CAE WF  RGNR CEICG+TA N+ G    GFM   +E      +T++ +  +S 
Sbjct: 213 VAHGHCAEAWFRLRGNRTCEICGETAQNITGHGDNGFMEDWHE------ATLADIGNNSS 272

Query: 121 DSLSCCW-GQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLE 180
           +    CW  Q FCNFL+ C ASE KL+NPMR+IKVQKLVLNISVGESGDRLTRAAK VLE
Sbjct: 273 ERNVSCWRRQPFCNFLMACLASENKLANPMREIKVQKLVLNISVGESGDRLTRAAK-VLE 332

Query: 181 QLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSD 240
           QLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSD
Sbjct: 333 QLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSD 392

Query: 241 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKED 300
           TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTKED
Sbjct: 393 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKED 452

Query: 301 AMKWFQVKYEGVILNKSQAIT 311
           AMKWFQVKYEGVILNKSQ IT
Sbjct: 453 AMKWFQVKYEGVILNKSQNIT 466

[Close]

BLAST of MS022467 vs. ExPASy TrEMBL
Match: A0A7J7E2C7 (60S ribosomal protein L11 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW01G00730 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 1.0e-123
Identity = 237/327 (72.48%), Postives = 255/327 (77.98%), Query Frame = 0


Query: 2   IDIKSSGESVDG---EDSSEEKVCRICHLSSEHQ---------------SIASDLIQLGC 61
           ID+K       G   E    EKVCRICHLS+E                 S + DLIQLGC
Sbjct: 137 IDVKHGDGGGGGGIKEKCDGEKVCRICHLSTEGSLENTVATMTTNAHMTSTSMDLIQLGC 196

Query: 62  RCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVS 121
            CKDELGI+H  CAE WF  +GNR CEICGQTA N+ G+    FM + NE+R   +    
Sbjct: 197 GCKDELGIAHVHCAEAWFKLKGNRLCEICGQTAKNITGVGDNRFMEEWNEQRYARNYN-- 256

Query: 122 TVSLDSDDSLSCCW-GQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTR 181
                S +    CW G  FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTR
Sbjct: 257 ----SSSERREGCWRGPPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLTR 316

Query: 182 AAKVVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 241
           AAK VLEQLSGQ+PV+SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL
Sbjct: 317 AAK-VLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 376

Query: 242 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQ 301
           LR+NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVGIQ
Sbjct: 377 LRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQ 436

Query: 302 HRVTKEDAMKWFQVKYEGVILNKSQAI 310
           HRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 437 HRVTKDDAMKWFQVKYEGVILNKSQNI 456

[Close]

BLAST of MS022467 vs. ExPASy TrEMBL
Match: A0A498IS72 (RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_017361 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.3e-122
Identity = 231/330 (70.00%), Postives = 260/330 (78.79%), Query Frame = 0


Query: 3   DIKSSGESVDGEDSSEEKVCRICHLSSE----------HQSIASDLIQLGCRCKDELGIS 62
           D+K       G     E+VCRICHL+S+          + SI +DLIQLGC CKDELG++
Sbjct: 164 DMKCGSGRGFGNKWDGERVCRICHLNSDISPPRKMGTANSSITADLIQLGCGCKDELGVA 223

Query: 63  HRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSDDS 122
           H  CAE WF  +GNR CEICG+TA N+ G  +  FM + +E      +T++ +  +S + 
Sbjct: 224 HGHCAEAWFRVKGNRTCEICGETAQNITGHGNNRFMEEWHE------ATLADIGNNSSER 283

Query: 123 LSCCW-GQRFCNFLLTC-----------TASEKKLSNPMRDIKVQKLVLNISVGESGDRL 182
            + CW GQ FCNF++ C            ASE K++NPMR+IKVQKLVLNISVGESGDRL
Sbjct: 284 NASCWRGQPFCNFIMACLVIAFVLPWFFRASESKMANPMREIKVQKLVLNISVGESGDRL 343

Query: 183 TRAAKVVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY 242
           TRAAK VLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY
Sbjct: 344 TRAAK-VLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEY 403

Query: 243 ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVG 302
           ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVG
Sbjct: 404 ELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVG 463

Query: 303 IQHRVTKEDAMKWFQVKYEGVILNKSQAIT 311
           IQHRVTKED+MKWFQVKYEGVILNKSQ IT
Sbjct: 464 IQHRVTKEDSMKWFQVKYEGVILNKSQNIT 486

[Close]

BLAST of MS022467 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 130 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFG 189
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFG 61

Query: 190 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 249
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 62  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 121

Query: 250 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 309
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 122 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 181

Query: 310 T 311
           T
Sbjct: 182 T 181

[Close]

BLAST of MS022467 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 329.3 bits (843), Expect = 3.3e-90
Identity = 164/172 (95.35%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 139 MRDIKVQKLVLNISVGESGDRLTRAAKVVLEQLSGQSPVFSKARYTVRSFGIRRNEKIAC 198
           MRDIKVQKLVLNISVGESGDRLTRA+K VLEQLSGQ+PVFSKARYTVRSFGIRRNEKIAC
Sbjct: 1   MRDIKVQKLVLNISVGESGDRLTRASK-VLEQLSGQTPVFSKARYTVRSFGIRRNEKIAC 60

Query: 199 YVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF 258
           YVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF
Sbjct: 61  YVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF 120

Query: 259 FVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 311
           +VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 121 YVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 171

The following BLAST results are available for this feature:

BLAST of MS022467 vs. NCBI nr


Match Name	E-value	Identity	Description
OMO65429.1	8.2e-128	75.62	Ribosomal protein L5 [Corchorus olitorius]	[more]
OMO76145.1	1.8e-127	75.31	Ribosomal protein L5 [Corchorus capsularis]	[more]
RXH99070.1	2.9e-125	73.21	hypothetical protein DVH24_011395 [Malus domestica]	[more]
KAF5752812.1	2.1e-123	72.48	60S ribosomal protein L11 [Tripterygium wilfordii]	[more]
RXH86308.1	8.8e-122	70.00	hypothetical protein DVH24_017361 [Malus domestica]	[more]

BLAST of MS022467 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46287	4.3e-95	96.67	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
P42795	2.1e-94	95.58	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	2.1e-94	95.58	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
A2YDY2	2.0e-92	94.48	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	2.0e-92	94.48	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of MS022467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1R3H527	4.0e-128	75.62	Ribosomal protein L5 OS=Corchorus olitorius OX=93759 GN=COLO4_31259 PE=3 SV=1	[more]
A0A1R3I0M6	8.9e-128	75.31	Ribosomal protein L5 OS=Corchorus capsularis OX=210143 GN=CCACVL1_15847 PE=3 SV=...	[more]
A0A498JUC1	1.4e-125	73.21	RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_01139...	[more]
A0A7J7E2C7	1.0e-123	72.48	60S ribosomal protein L11 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW01G0073...	[more]
A0A498IS72	4.3e-122	70.00	RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_01736...	[more]

BLAST of MS022467 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	1.5e-95	95.58	ribosomal protein large subunit 16A	[more]
AT3G58700.1	1.5e-95	95.58	Ribosomal L5P family protein	[more]
AT4G18730.1	1.5e-95	95.58	ribosomal protein L16B	[more]
AT5G45775.2	1.5e-95	95.58	Ribosomal L5P family protein	[more]
AT5G45775.1	3.3e-90	95.35	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 21..73 e-value: 1.6E-12 score: 57.6
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 22..72 e-value: 4.1E-8 score: 33.2
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 14..79 score: 19.718292
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 5..84 e-value: 1.1E-15 score: 58.9
IPR031309	Ribosomal protein L5, C-terminal	PFAM	PF00673	Ribosomal_L5_C	coord: 195..293 e-value: 3.0E-20 score: 72.2
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 137..191 e-value: 6.4E-19 score: 68.0
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 129..306 e-value: 4.4E-70 score: 236.8
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 136..302
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 116..310
None	No IPR available	PANTHER	PTHR11994:SF31	60S RIBOSOMAL PROTEIN L11-1	coord: 116..310
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 16..76
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 168..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022467.1	MS022467.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding