MS022400 (gene) Bitter gourd (TR) v1

Overview


Name	MS022400
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 40-like isoform X1
Location	scaffold47: 3060648 .. 3067447 (+)
RNA-Seq Expression	MS022400
Synteny	MS022400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTCGGACGCAAACTTTTCAAGACCAAGTTATGCGTGCTTTATCAGAAAGGCCGCTGTTCTCGCCCAAGTTGCTCGTTCGCTCACGGCAGCGCTGAACTCAGGCGATTTGCTGGTGGTGGTGGTGCCTACAACGGTAATTTGCCCTTGTATCTACGGTCTTTTACTATGTTCTTTAGTTGGTGGCGTGTAGGGTGATTAAATGGAAGTTTACAGTCACTAATGTCTACGTTTCTTGCAATTACTGGGGTGTATGATTCTCAAATCTTTTGGTTATCGTAGTTGATTATCCTTATTTCAATGATAATAGTGGTACAGTGGTCAGATAATGGAAAATGTTATTGGGTTTAATTGTGCGAGCATGTGTGATTCAGGCGGCTCCGAGTTTAATTCCTGCTTGGGGATGGGGGTAAGACTAATTTAAGGCTGGTGGTGGCTATTTCTTCCAGTATGATCTTCTTCTTATAATTTTTTCGTAGACTTAATTTGTAGCATTTCTTATCCTATTATGTCCTATTTGGTAACACTCTTGTTTCTTGTTTATTATTTCTTGTTTTGCTGAAAAACTTGAGCATTTGAGAACTTGTTTCTCATTTTTCTAGAAATGTTCCTAAAATTGTATAGAAATTTTGGAAACTTAAGTTTATTGTTTATTGTTCCCATTTCCAATAAAATCAAGTTTCATTCTTTTTTCAATAAAAAAAAATGAAGAATAAGAAATAGTTACCAAATGCAATTATCTTTTTCTTTATTAAAAAAAGGAAACAAAAAATAAAAAACGAGAACGTTACCGAACGGGCTCTTAATATCGGGCATTTATATATTTTTTTTCTTTCTGTTCTTGTTTACGTACCTCTTTACTAATGTATATGTTTTTTTTTCCTCTTTATTATAACCTACATATTTTCTGAATGCTCCTTATGGTGCATTATGATGGAGAGGAACTCTTAAGAATGGACTAAAAACTAGGTTGTTTCAGTCAATCATTTGAAAGTATTCTGTCTGCCGTGAATGTATAGCTATATGAACACAATCTTCCTCATCCATGCCATATGGTTTGGGCATCTCGTTGCTTGTTATCTTCGATCTTTTAATTGGTTCTGCACGAGTCATCACTTGAGATATCCACATCTTTCCCAATGGACATATTGTAGAAGGACGTTGAATAATTCCAATAATGGGAGATGTCAAAAAGTCTTCAGACTTGCATGTTCACTGAAGTGGCTAGTAAAAATAATCAACCAGATCAGAGCTTTTTCGTTGGAATGGATATGGTGGATTTTTCTTGATAAAGCTGCCTGTGATATATTCCTGGAGATGTTTATGGTCCTTGTTCTGCATCAACTAAACCCGAAAGTACTTGTTGAAGAATCATAATTGTTTGCCATAATTTATACATCTCCCACAGCTTTTGTTAATTACCCCATTATGATCTTATGGGTTACTCTACTGTTGTTCATGGGGCTTCATTTTTCTTAGAAGAGGTTCTTCATTGGTTATTCCTCCTGAGTATACCAAATGGACTTCTTGTTGGAGTAGTGCAATTTTTATGGGAGTAGTGCATGAAGGATTGAAATTGGATGTACGTCATTGCATTGGAGTGTACTTATATCACTATGTGGAATCCCAGAGAAATCTCCTATTTAGATCAAAGTTATGTGAACTTATTGTTCATCGAGGAGACCAGAGTTTAATCCTTCGTTCTACTTGGTATATGAAGGTTATCCCATGGTTTAATCTCAGGCATGGATTTTTCTATATATTTTCATTATTTCTATGGCTCTTTTGGAACTGGCATGGCGGCACTAATGCTGTTCCATATTTTGTTTCTCATCTTTTCCATGTAATGGTAAGATAAGCCTTGTAAGAATTTCATTGCTTCATTGATTGTTCTTAGAAAAAACATCTAGCATTAACTTAACTTGTTAAAACAAAATTTCCTCATCTTTGCAGGTAGACGAGAATATAGAGGAAGTGATTTAAGGCATAAGCTTGACAACAGGCATTCTCCCCTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGGTAGTGAAGCCATTTGTTTCTTTGTTCCTCTCTCTCTCCCCCCTTTACTTAGTAATCTTTTCTCCAATGTCATCTTTCCTGTAATCCCCAATTTATATGACGTTCACTTTTACAATTTCTAGTTAAGGAATGTAGGAAGTTTGATTTCCCAAACACATACACGCACACACGTATTTTAATAGCAGAGTTCTTCCCTGATTTCTTTCAATTGGAATTTGAATTGCAGAGTATAGCTCCTCCTGGTCACTTGAGCGACAAAGGTACATTGTCATATATATATAAATTACATTTTATTCTCTCTTTTTTTTNTCACCTGCCTAGAGGACGTCTTAATGTAAATTATGATTCTCATCATATATATGTTTATGTTTTGGCAGTGAAAAGTGATTCTCATTTACTATTTAAAGATGCTAAGAAATGTGAAACATAATAAGTAAATAGAATCTTTGACCTGTACGGTAGGCAACATGGTGTTATCTCCTGTATAAGGGTATGGATAAAGGAAAGGCAGAAATTGATCCTGAGATCCAAATATCTTTTTTTTTCCCTTTTTTTTTCTTTGATAATTGGGAGTCGAGCTTTGCTCCCCTATACCCGTCCTAGGGCCCAGACTCGGGAGGCATCAATAGTTTTTAATACTAAACTCACCAAAAGGTTCAAACTCGAGACCTCTAAACTGATATGGCTAAGAGACCCCAAACCCTTGCCAACAGGACTGCTCCTCAGGGGCAAGATGCAAATATCTATCGAGAGATTTACTTAAGTCCTTATGAGATATGTTTATGGGATTTTTATCATGGGTAATGGTCATGTGAAATCCTTTCTTCCTACCCAGTGCCCTTCTTGATTTTGTTATTTCTTGAGCCATGCTTGATCTTTAAAATTTCTCTTACTTTATAGTTAGAAAATCTTATGTGACATGATATCTTGTGGCCTGCCTGCATTCATTCTTCCACAATCAATTATATATTCATGAATATTGGTTAGCAAATTACTTCTTACAAATTTTCAGTCTCTTTCCACACGGATAATTTGGAATTGCACACATTCATTTCAGTGACCGTAAAAGAAGGAAAAAGGAACATGGGGATTCCCATAATGATTATTCTGGGAGTTTGAGGATTTCAGATAGAAGTGAAGAACGAGATAGAGAAGGGAAAATCACATCATCTACTTCTAGAGACATTCTTGAGGGGCAGGTACAATCTTTTATCAATTAGAAATAGTTACTCTCTGGAAATCTTGTTTGATCATCTTTGTATTACACAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTTAGTCACGTCTCTTTATTTTAGTTGCTCTCTGCCTCTAATTATGTTCAAGCAATAGGCAAGAAACATTTCCATTTTCCATTGATGTATTAATTGCGAGGGTTTCCTATTTTTTAAATTTTAATTATAACTCTTCCTAAATGTGCCTTTACGATTGTATTTTCTCAAATGTATCCTTGTAAGCTGTTTGAGGTGATTAGTTATTGTTTTTTTGGTGGTGTTTAGTTATTGTTGGGAAATCCTCTTTGTAATATGTTGGCTGAAATGAGTCAGAGGGTCACCACTCACCAGTCACATGATTGACCATACATTCTTAATGAGTTTGTTCAGTTTTTTGTTTTTGTCCAGCAAAAATTGATATAGAAACACAATAGTCTGGACTGGATCCAGAATTTAGGAAAGAGTTGCTGGAAATTTTTGAGATGGTTAAAGGGGGGCAGAAGATGATTTATCATCAATGAGGTCACCAATTATTAATTAGTGTGCTCGGGTCAGAGATTGTTGGAGAAAAGCTGAAACAACCAGAACAATGTAAGTTTGTCAATGAGCGCTAGAGAATGAAATGAAGGGGTAAAGCACCAAAAAGTTTCATGTGGGTTTATAGGATCGTACCAAAGCGGGTTAGAGTGAAAATAAAAACTAGCTGTTGAGTGTTTCTAGTTGGGTTGTGCTGGTAGAAAAAGATTGAACTCATACCAAATTTACTATATGTTTGCAAATTTGGTCAGAATGTGGTGGGCCATTGGCCACAGAATTGAAAAACACCCATTGAAGGGATGCAATCCTGTCTAATGGTCAGAACAAATTTGGATGTGTATCCTCAGGTTTTGCAATTTGTAAATAAATTTGGGGGTGGGTGGGCAGGGAGGTTGAATCATATGAATGTATTCCCAAAAGTTGAAGTTAAGGGTCATAGTTTAGGGGAGATATCGTTGAAGATTTTCTGATATAGGCAGAATTTAGGCAATGTTACAGTTTCAGCCAAATTAATGCTGACATTCGAGAACTTAGCTCAATTGGGTCTTAATTATCTGGATTTGCAAAAGGGGAAAGGATCATAGAAGCTATTGTGATCAAACGCATGAATGGACACAACCATCAGGCGAAGGGGTGAACATGTGGCTTTTAGGAGCACATAATTGGGTGGCGTAGTTAGCTGTGGGGTTCACGAACTCCTACCTACAATTAGGGTTGGGAAACTTGTACTTGGTGTTGGGAATGGCAACATTTGGTTGGGCTTCATTTTTTAAAAAATAAATAAATTAAGCATCCCTCAAACTTCCACTCCTTGTTTTTTGAAGCCTTCTGGGTGCTGCAGCGCCACTGATGGTGGGATGGGCAAAAGTCAATTGAGTGGAATAGGCACATTTAGAACGGATAGTAAAAAAAGTGAAGCCTCAGAAAAGGAGACTGTATTTCTCCAGATCATTGTGGTATCTCTAAAATTTTATAAGCTGGATTTGCCTGGGCGTGAAAAAAGTGCAGCCTCACGAAAGGAGATTTTATTTCTCCACATGATTGCATATTTTATGCTATCTTCTTAACTCTTAAGCGGTGTATGCTATTGATTCGTATTTGATTAAGCAATATTTTCAAGATCATGTATATTTCACTTTACCAATGAAATTGTTTTGTTTCCTATAAAATTATATACAAGATATTAACAAATTATATTTTAATTTGCAGGTCTACCTGGAAGAGAAGATCCAAGAAGTGGACAGTTTGACTTCTAGAATTCAGGAACTGGAATCTCAATTATACAAAGAAAGGGAGGAGTGCAAAAGGTACTCATAATCGTCTATCCACTGACATGTTTCTTGGTAAATGTGGACATCTACTGCTTACTTCTATTTTTCTTGGACCACTAATATTCAGGATCAAATCAAAAATTAAGAAGTTTGTCAAAGCACATAATCGTTACACGAGGATACAAGATGAACTGAAGCGGCAAGTATTTATCAAATTATTTTGACTGCATTTTCTAATGTTTGATGATTTACAGAAAAATATGTTAACCTTTTTAAACTAGTAGATCAGAAGCCCGATTTCAACATCTGGGAGATCAGCTGGCCTCAGATGTTAGTAAAATTGGTGCCAACGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCAGCCAGCCCTCTTCGCGACCTGCAAAAAGATGCTTCTTCAAGCAAGAAGAAAATGCATGTTATTCAAGATATTGCCGAAAACTCAAAGCAAGGTGGAATGCGCATCCTGCATTTTGATTATTTTTAATGATGACATCTTTCTGTTGGAACTTTCCTCTTTTTTCTGATACTTATAATTGTGCTACATTAGCCGATTTAATCAAAGGAAGTAAGGAGGCAGTGAGCAGATTTAAAAGGTTCTCTCGGTGGAATGCGCATCCTGCTCAATCGTTATATAGCAAAATTGAGACGGTTGGCAACAAAATCAATGATTTGATACCTACAGCAAACGAAAGCAAGCAGAAGAGGGGAAAAACATCTAGCAGCGTTCTTACTGCAGATAAGGTGACTTTGATGTTTTCTATTCAATTTTTTTGTTTGTACAATTTACTGTGTTGTGTGCTTGAGGTTTTCTGTAAGTGATGTCTGATTAGTTTTACAGTATGGAGTGCGAAGCCCAGATGGGTTATGGCAGCATGAAGGGTGCTACTATCTATTTAATTCGTTCCCTTGTAGTTTTTTAATATCATTGTTTTCTAATCTAGGATGATGAGATTCTCATTAATCCTCCCTTCCTTGCCCTGCGATAGTTATGAAGCTTCTATATGTGCAATGTGATATGATTAAATGCTGGTGGTGTTGCACTAAAATTCTCAACTCAAATTTGCAGATTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCGTTAACCAGCATGGCTGCTCATGCAGTTGATGAAGATGTTGATATCGAATTGGAAGTTAATAATGAAGTGAATGAAACAAGGGGAAATTCTAAGGAAGTTGCATCAGGCAGCCTGCCGTTCCTGCCCCCTCCACCTCCTCCAATCCGTGAAAACAACCATTCAAGGGTTAGCAAGTTCTCTAATTTCACTACTTTTCTTCAGTTCTATTTTTCAAAATTGAGAATTTCTTAAACTGTGTACACATTGAAAAGGAACAAAATTCCAATTATTTCTTACGAACGAAGTTTACCTTTCATTTTCTACATTCATTCAAATTTCTATTACGAACATGGCGGCGATCTTCTTTTAAATAAGTTTAGTTTAGTGTAGAGAATCATTAGTTGGTTCTATTATCGAACATGGCTTTTACTTTTTAACATGCTTATAGTATCTAACGTGAGATTTGGATCGCAGTATGAGGGTGAAGATCAAAACGTAGATGTGGAGGTGCTCGATGAGGAAAGGTCGCATTTGGACGATGCT

mRNA sequence

ATGATGGTCGGACGCAAACTTTTCAAGACCAAGTTATGCGTGCTTTATCAGAAAGGCCGCTGTTCTCGCCCAAGTTGCTCGTTCGCTCACGGCAGCGCTGAACTCAGGCGATTTGCTGGTGGTGGTGGTGCCTACAACGGTAATTTGCCCTTGTATCTACGGTCTTTTACTATGTTCTTTAGTAGACGAGAATATAGAGGAAGTGATTTAAGGCATAAGCTTGACAACAGGCATTCTCCCCTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGGTAAGTATAGCTCCTCCTGGTCACTTGAGCGACAAAGTGACCGTAAAAGAAGGAAAAAGGAACATGGGGATTCCCATAATGATTATTCTGGGAGTTTGAGGATTTCAGATAGAAGTGAAGAACGAGATAGAGAAGGGAAAATCACATCATCTACTTCTAGAGACATTCTTGAGGGGCAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTGGAAGAGAAGATCCAAGAAGTGGACAGTTTGACTTCTAGAATTCAGGAACTGGAATCTCAATTATACAAAGAAAGGGAGGAGTGCAAAAGGATCAAATCAAAAATTAAGAAGTTTGTCAAAGCACATAATCGTTACACGAGGATACAAGATGAACTGAAGCGGCAACTGGCCTCAGATGTTAGTAAAATTGGTGCCAACGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCAGCCAGCCCTCTTCGCGACCTGCAAAAAGATGCTTCTTCAAGCAAGAAGAAAATGCATGTTATTCAAGATATTGCCGAAAACTCAAAGCAAGCCGATTTAATCAAAGGAAGTAAGGAGGCAGTGAGCAGATTTAAAAGGTTCTCTCGGTGGAATGCGCATCCTGCTCAATCGTTATATAGCAAAATTGAGACGGTTGGCAACAAAATCAATGATTTGATACCTACAGCAAACGAAAGCAAGCAGAAGAGGGGAAAAACATCTAGCAGCGTTCTTACTGCAGATAAGATTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCGTTAACCAGCATGGCTGCTCATGCAGTTGATGAAGATGTTGATATCGAATTGGAAGTTAATAATGAAGTGAATGAAACAAGGGGAAATTCTAAGGAAGTTGCATCAGGCAGCCTGCCGTTCCTGCCCCCTCCACCTCCTCCAATCCGTGAAAACAACCATTCAAGGTATGAGGGTGAAGATCAAAACGTAGATGTGGAGGTGCTCGATGAGGAAAGGTCGCATTTGGACGATGCT

Coding sequence (CDS)

ATGATGGTCGGACGCAAACTTTTCAAGACCAAGTTATGCGTGCTTTATCAGAAAGGCCGCTGTTCTCGCCCAAGTTGCTCGTTCGCTCACGGCAGCGCTGAACTCAGGCGATTTGCTGGTGGTGGTGGTGCCTACAACGGTAATTTGCCCTTGTATCTACGGTCTTTTACTATGTTCTTTAGTAGACGAGAATATAGAGGAAGTGATTTAAGGCATAAGCTTGACAACAGGCATTCTCCCCTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGGTAAGTATAGCTCCTCCTGGTCACTTGAGCGACAAAGTGACCGTAAAAGAAGGAAAAAGGAACATGGGGATTCCCATAATGATTATTCTGGGAGTTTGAGGATTTCAGATAGAAGTGAAGAACGAGATAGAGAAGGGAAAATCACATCATCTACTTCTAGAGACATTCTTGAGGGGCAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTGGAAGAGAAGATCCAAGAAGTGGACAGTTTGACTTCTAGAATTCAGGAACTGGAATCTCAATTATACAAAGAAAGGGAGGAGTGCAAAAGGATCAAATCAAAAATTAAGAAGTTTGTCAAAGCACATAATCGTTACACGAGGATACAAGATGAACTGAAGCGGCAACTGGCCTCAGATGTTAGTAAAATTGGTGCCAACGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCAGCCAGCCCTCTTCGCGACCTGCAAAAAGATGCTTCTTCAAGCAAGAAGAAAATGCATGTTATTCAAGATATTGCCGAAAACTCAAAGCAAGCCGATTTAATCAAAGGAAGTAAGGAGGCAGTGAGCAGATTTAAAAGGTTCTCTCGGTGGAATGCGCATCCTGCTCAATCGTTATATAGCAAAATTGAGACGGTTGGCAACAAAATCAATGATTTGATACCTACAGCAAACGAAAGCAAGCAGAAGAGGGGAAAAACATCTAGCAGCGTTCTTACTGCAGATAAGATTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCGTTAACCAGCATGGCTGCTCATGCAGTTGATGAAGATGTTGATATCGAATTGGAAGTTAATAATGAAGTGAATGAAACAAGGGGAAATTCTAAGGAAGTTGCATCAGGCAGCCTGCCGTTCCTGCCCCCTCCACCTCCTCCAATCCGTGAAAACAACCATTCAAGGTATGAGGGTGAAGATCAAAACGTAGATGTGGAGGTGCTCGATGAGGAAAGGTCGCATTTGGACGATGCT

Protein sequence

MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKRQLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

Homology

[Close]

BLAST of MS022400 vs. NCBI nr
Match: XP_022136017.1 (zinc finger CCCH domain-containing protein 13 [Momordica charantia])

HSP 1 Score: 792.7 bits (2046), Expect = 1.6e-225
Identity = 426/454 (93.83%), Postives = 428/454 (94.27%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNG             
Sbjct: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRGSDLRHKLDNRHSPLQERDSRGRHGPR +YSSSWSLERQSDRKRRKKEHGDSHN
Sbjct: 61  -RREYRGSDLRHKLDNRHSPLQERDSRGRHGPR-EYSSSWSLERQSDRKRRKKEHGDSHN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSGSLRISDRS+ERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ
Sbjct: 121 DYSGSLRISDRSDERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKRSEARFQHLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           LASDVSKIGANEEDSSINIVSDGEDPGYHAASP RDLQKDASSSKKKMHVIQDIAENSKQ
Sbjct: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPFRDLQKDASSSKKKMHVIQDIAENSKQ 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV
Sbjct: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
           LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP
Sbjct: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
Sbjct: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 439

[Close]

BLAST of MS022400 vs. NCBI nr
Match: XP_022988786.1 (zinc finger CCCH domain-containing protein 40-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 669.8 bits (1727), Expect = 1.6e-188
Identity = 364/454 (80.18%), Postives = 400/454 (88.11%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G             
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFA---GAHDG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSWSLERQSDRKRRKKE+GDS N
Sbjct: 61  -RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-DYSSSWSLERQSDRKRRKKEYGDSRN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQ
Sbjct: 121 DYSGNLRISDRSEERDREGKI-SSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKERE+ +RIKSKIKKFVKAHNRY+RIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRSQARLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK HV+QDIAENSK+
Sbjct: 241 LGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HVVQDIAENSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V
Sbjct: 301 ADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+NN+VNETR N+KE + GSLPF PPP
Sbjct: 361 SSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINNKVNETRENTKEASFGSLPFPPPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRE NHSRYE EDQNVDV  LD+ER+ LD+A
Sbjct: 421 PPPIREINHSRYESEDQNVDVVTLDDERARLDNA 434

[Close]

BLAST of MS022400 vs. NCBI nr
Match: XP_022930759.1 (zinc finger CCCH domain-containing protein 40-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 659.8 bits (1701), Expect = 1.6e-185
Identity = 360/454 (79.30%), Postives = 399/454 (87.89%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G             
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFA---GAHDG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSWSLERQSDRKRRKKE+GDS N
Sbjct: 61  -RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-DYSSSWSLERQSDRKRRKKEYGDSRN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQ
Sbjct: 121 DYSGNLRISDRSEERDREGKI-SSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKERE+ +RIKSKIKKFVKAHNRY+RIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRSQVRLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK H++QDIA NSK+
Sbjct: 241 LGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HIVQDIAGNSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V
Sbjct: 301 ADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+N++VNETR N+KE + GSLPF PPP
Sbjct: 361 SSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINSKVNETRENTKEASFGSLPF-PPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRE NHS+YE EDQNVDV  LD+ER+ LD+A
Sbjct: 421 PPPIREINHSKYESEDQNVDVVALDDERARLDNA 433

[Close]

BLAST of MS022400 vs. NCBI nr
Match: XP_023530203.1 (zinc finger CCCH domain-containing protein 40-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 654.8 bits (1688), Expect = 5.2e-184
Identity = 360/454 (79.30%), Postives = 398/454 (87.67%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G             
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFA---GAHDG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSWSLERQSDRKRRKKE+GDS N
Sbjct: 61  -RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-DYSSSWSLERQSDRKRRKKEYGDSRN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQ
Sbjct: 121 DYSGNLRISDRSEERDREGKI-SSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKERE+ +RIKSKIKKFVKAHNRY+RIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRSQVRLEQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK H++QDIAENSK+
Sbjct: 241 LGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HIVQDIAENSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++N LIPTAN+SKQKRG+TS++V
Sbjct: 301 ADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNALIPTANDSKQKRGRTSTAV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            +ADK+RGLESG VVPLTSMAAHAVDE+VDIEL+VNN+VNETR N+KE + GSLPF PPP
Sbjct: 361 SSADKVRGLESG-VVPLTSMAAHAVDEEVDIELDVNNKVNETRENTKEASFGSLPF-PPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRE NHSRYE EDQNVDV  LD+ER+ LD+A
Sbjct: 421 PPPIREINHSRYESEDQNVDVVALDDERARLDNA 432

[Close]

BLAST of MS022400 vs. NCBI nr
Match: XP_038887776.1 (zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida])

HSP 1 Score: 641.0 bits (1652), Expect = 7.8e-180
Identity = 346/455 (76.04%), Postives = 387/455 (85.05%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           MMVGRKLFKTKLCVLYQKG CSRPSCSFAHG+AELRRFAG                    
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGAS-----------------T 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            R++YRG+DLR KLD+RHSPLQERDSRGRH PR +YSSSWS+ER SDRKRRKKEHGDSH+
Sbjct: 61  GRQDYRGNDLRLKLDSRHSPLQERDSRGRHEPR-EYSSSWSIERHSDRKRRKKEHGDSHH 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSG+LRISDR+EE+DR+GKI SS SRD LEGQLNKMQ+DI+MAEHHKHQAEVYL+EKIQ
Sbjct: 121 DYSGNLRISDRNEEQDRQGKI-SSASRDTLEGQLNKMQSDIDMAEHHKHQAEVYLDEKIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVD LTSRIQELESQLYKER+EC+RIKSKIKKFVKAHNR++R+QDELKR          Q
Sbjct: 181 EVDILTSRIQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L  DV+KIGANEEDSSINIVSDGEDP YHA+ P  DLQKD S+SK+KMH +QD AENSK+
Sbjct: 241 LGPDVNKIGANEEDSSINIVSDGEDPVYHASGPFHDLQKDTSASKRKMHSVQDTAENSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KG+KEAV R  R SRWNAHPA+S+YSKIE VGN+INDLIPTANES+QKRGKTSSSV
Sbjct: 301 ADLNKGNKEAVGRLSRISRWNAHPAKSMYSKIEAVGNEINDLIPTANESRQKRGKTSSSV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFL-PP 420
             ADK+RGLESGVVVPLTSMAAHAVDE+VDI+LE++NEV E R ++KE ASGSLPFL PP
Sbjct: 361 SAADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEISNEVKEPRESTKEAASGSLPFLPPP 420

Query: 421 PPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPPI E NHSRYE EDQNVDVEV+D+E   +DDA
Sbjct: 421 PPPPIHEFNHSRYESEDQNVDVEVVDDETEVMDDA 436

[Close]

BLAST of MS022400 vs. ExPASy Swiss-Prot
Match: Q93XW7 (Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=At3g21810 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.0e-46
Identity = 164/468 (35.04%), Postives = 248/468 (52.99%), Query Frame = 0


Query: 2   MVGRKLFKTKLCVLYQK-GRCSRPSCSFAHGSAELRRFAGGGGAYNG---NLPLYLRSFT 61
           M G  ++KTKLC+L+ K G CSRP+C+FAHG+AELRR   G  ++ G   N+   LR   
Sbjct: 1   MSGSSMYKTKLCILFNKTGDCSRPNCTFAHGNAELRR--PGESSFTGRRHNMDSDLR--- 60

Query: 62  MFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPR----GKYSSSWSLERQSDRKRRKK 121
               RR    SDLR +L  + SP + R S  R G R      + +S   E + D+  R+ 
Sbjct: 61  ---DRRHNMDSDLRDRLGRQFSP-ERRPSLDRSGRRVQRFSGHDNSMPFENRRDKDYREN 120

Query: 122 EHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEV 181
              D   DY+G L++ +R E+R  +G+       ++LE QL  ++ D++M    K + E 
Sbjct: 121 RRFDERRDYAGGLKVGNRIEDRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEA 180

Query: 182 YLEEKIQEVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR---- 241
            +E K  EVD LTSRIQELE+QL +E++EC+RI S  KKFVK +NR+ R QD+LKR    
Sbjct: 181 SVERKAHEVDILTSRIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKRSEAR 240

Query: 242 ------QLASDVSKIGANEEDSSINIVSDGEDPGYH---AASPLRDLQKDASSSKKKMHV 301
                 QL++ ++    N  D  ++IVSD E  G +   A  P  +LQ  +S S+KK +V
Sbjct: 241 LQKLGNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYV 300

Query: 302 IQDIAENSKQADLI-KGSKEAV-SRFKRFSRWNAHPAQSLYSKIETVGNKINDLI--PTA 361
            Q   +   +  LI +G +E V +  KR   WN   ++S YS+ E+      D I   ++
Sbjct: 301 DQYTTKEPVEDGLIGRGEEEKVENEKKRPPCWNMLSSKS-YSEEESGAWNDEDTINRSSS 360

Query: 362 NESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNS 421
            E   KR + S      DK        V+  TSMAA   D           +V E+   +
Sbjct: 361 KEDNWKRRRFSIGTSATDK--------VILSTSMAAREFD-----------DVAESEEEN 420

Query: 422 KEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
            E A+GS     PPPPP R+ +  R   ++ +V+ +V+++++++ DD+
Sbjct: 421 PEAANGSPLISLPPPPPFRDAHVQR---DEDDVNGDVMEQKKAYDDDS 436

[Close]

BLAST of MS022400 vs. ExPASy Swiss-Prot
Match: Q6H7U2 (Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0161200 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-44
Identity = 154/452 (34.07%), Postives = 239/452 (52.88%), Query Frame = 0


Query: 8   FKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRG 67
           +KTKLC L+Q+G C+R +CSFAHG  ++RR     GA           FT    RR+YR 
Sbjct: 11  YKTKLCALWQRGNCNRDTCSFAHGHGDIRRPPSSRGA-----------FTHHPGRRDYRA 70

Query: 68  SDLRHKLDNRHSPLQE----RDSRG-------RHGPRGKYSS-SWSLERQSDRKRRKKEH 127
            D R ++D R SP +     R+SRG       R   R + SS S S  R+S+R+  KK  
Sbjct: 71  GDFRGRIDRRFSPRRRHSPGRESRGHRPLYDRRPSSRERDSSYSRSPSRKSERRHEKKT- 130

Query: 128 GDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYL 187
            D   + S SL +SD ++E+ ++ K +S   ++  E QL +++ D+E     K Q EV L
Sbjct: 131 DDGETNSSRSLSLSDNNDEKKKD-KFSSGDEKEDHEKQLKQIRLDMEALRDDKTQMEVIL 190

Query: 188 EEKIQEVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKRQ----- 247
           +EKI EV  ++S++ +LE QL +E++EC R+ SK+KKF+KAH R+ + Q+E+KR      
Sbjct: 191 DEKIDEVRKISSKVNDLEVQLRREKDECHRMTSKMKKFIKAHARFLKAQEEVKRSQARFE 250

Query: 248 -----LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDL----QKDASSSKKKMHVI 307
                LASD+ K GANEE SS+N   +   P   AA+  R +     ++A + KK+    
Sbjct: 251 RLGDLLASDILKRGANEEGSSVNEDLNERSPN-TAATKKRSIPYSTSEEAKAVKKRRERD 310

Query: 308 QDIAENSKQADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQ 367
            D    S +       +  V+ F + S+      +SLY K +                + 
Sbjct: 311 SDTMTRSDK------YRSDVTDFDKTSK-GTEATKSLYLKKKL--------------WED 370

Query: 368 KRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDE-DVDIELEVNNEVNETRGNSKEVA 427
           ++ K  +++ T +K++G     V+P T MAAHA+D+ +  IELE  +E  +    +    
Sbjct: 371 EKSKLGANIFT-EKVKGSPVRHVLPSTGMAAHAIDDLNEAIELEDRHESIDALLENDADD 426

Query: 428 SGSLPFLPPPPPPIRENNHSRYEGEDQNVDVE 433
               P +P  PPP+ +N + +YEG+D+ VDVE
Sbjct: 431 KTRSPAIPLQPPPVVQNAYEQYEGDDEEVDVE 426

[Close]

BLAST of MS022400 vs. ExPASy TrEMBL
Match: A0A6J1C4D9 (zinc finger CCCH domain-containing protein 13 OS=Momordica charantia OX=3673 GN=LOC111007819 PE=4 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 7.8e-226
Identity = 426/454 (93.83%), Postives = 428/454 (94.27%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNG             
Sbjct: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRGSDLRHKLDNRHSPLQERDSRGRHGPR +YSSSWSLERQSDRKRRKKEHGDSHN
Sbjct: 61  -RREYRGSDLRHKLDNRHSPLQERDSRGRHGPR-EYSSSWSLERQSDRKRRKKEHGDSHN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSGSLRISDRS+ERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ
Sbjct: 121 DYSGSLRISDRSDERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKRSEARFQHLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           LASDVSKIGANEEDSSINIVSDGEDPGYHAASP RDLQKDASSSKKKMHVIQDIAENSKQ
Sbjct: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPFRDLQKDASSSKKKMHVIQDIAENSKQ 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV
Sbjct: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
           LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP
Sbjct: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
Sbjct: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 439

[Close]

BLAST of MS022400 vs. ExPASy TrEMBL
Match: A0A6J1JI85 (zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486025 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 7.6e-189
Identity = 364/454 (80.18%), Postives = 400/454 (88.11%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G             
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFA---GAHDG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSWSLERQSDRKRRKKE+GDS N
Sbjct: 61  -RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-DYSSSWSLERQSDRKRRKKEYGDSRN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQ
Sbjct: 121 DYSGNLRISDRSEERDREGKI-SSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKERE+ +RIKSKIKKFVKAHNRY+RIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRSQARLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK HV+QDIAENSK+
Sbjct: 241 LGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HVVQDIAENSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V
Sbjct: 301 ADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+NN+VNETR N+KE + GSLPF PPP
Sbjct: 361 SSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINNKVNETRENTKEASFGSLPFPPPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRE NHSRYE EDQNVDV  LD+ER+ LD+A
Sbjct: 421 PPPIREINHSRYESEDQNVDVVTLDDERARLDNA 434

[Close]

BLAST of MS022400 vs. ExPASy TrEMBL
Match: A0A6J1ESE6 (zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437138 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 7.8e-186
Identity = 360/454 (79.30%), Postives = 399/454 (87.89%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G             
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFA---GAHDG------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSWSLERQSDRKRRKKE+GDS N
Sbjct: 61  -RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-DYSSSWSLERQSDRKRRKKEYGDSRN 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQ
Sbjct: 121 DYSGNLRISDRSEERDREGKI-SSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLYKERE+ +RIKSKIKKFVKAHNRY+RIQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRSQVRLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK H++QDIA NSK+
Sbjct: 241 LGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HIVQDIAGNSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V
Sbjct: 301 ADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+N++VNETR N+KE + GSLPF PPP
Sbjct: 361 SSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINSKVNETRENTKEASFGSLPF-PPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
           PPPIRE NHS+YE EDQNVDV  LD+ER+ LD+A
Sbjct: 421 PPPIREINHSKYESEDQNVDVVALDDERARLDNA 433

[Close]

BLAST of MS022400 vs. ExPASy TrEMBL
Match: A0A6J1GKR3 (zinc finger CCCH domain-containing protein 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454900 PE=4 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 7.9e-178
Identity = 342/454 (75.33%), Postives = 381/454 (83.92%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           MM+GRKLFKTKLCVLYQKG CSRPSCSFAHG+AELRRFAG                    
Sbjct: 1   MMIGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASS----------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            R+EYR +DLRHKLDNRHSPLQERDSRGRHGPR +YSSSWSLER SD KRRKK+HGDS  
Sbjct: 61  GRQEYRENDLRHKLDNRHSPLQERDSRGRHGPR-EYSSSWSLERNSDHKRRKKDHGDSRT 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DY+G+LRI+DRSEERDREGKI SS+SRD LEGQLNKMQADIEMAEHH+HQAEVYL+EKIQ
Sbjct: 121 DYAGNLRITDRSEERDREGKI-SSSSRDTLEGQLNKMQADIEMAEHHRHQAEVYLDEKIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLY EREEC+RIKSKIKKFVKAHNRY+ IQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYNEREECRRIKSKIKKFVKAHNRYSGIQDELKRSQFRLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSS+NIVSDGEDPGYHAA PL  L KD S+SK+K+HV QDIA NSK+
Sbjct: 241 LGSDVNKIGANEEDSSVNIVSDGEDPGYHAAGPLHHLHKDTSASKRKLHVDQDIAGNSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +R SRWNAHPA+S+YSKIE V N+ ND IP ANES+QKRGK S+SV
Sbjct: 301 ADLHKGSKEAVGRLRRISRWNAHPAKSMYSKIEAVRNENNDYIPKANESRQKRGKASNSV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            TADK+R L++GVVVPLTSMAAHAV+E+VDIELEVNNEV++ R ++KE ASGS P LPPP
Sbjct: 361 STADKVRSLDAGVVVPLTSMAAHAVNEEVDIELEVNNEVSDRRESTKEAASGSAPLLPPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
             PI E NHSRYEGEDQN+DVEV+D+E + LDDA
Sbjct: 421 QSPIHEINHSRYEGEDQNIDVEVVDDESAGLDDA 435

[Close]

BLAST of MS022400 vs. ExPASy TrEMBL
Match: A0A6J1GKX5 (zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454900 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 3.0e-177
Identity = 341/454 (75.11%), Postives = 380/454 (83.70%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFF 60
           MM+GRKLFKTKLCVLYQKG CSRPSCSFAHG+AELRRFAG                    
Sbjct: 1   MMIGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASS----------------- 60

Query: 61  SRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKRRKKEHGDSHN 120
            R+EYR +DLRHKLDNRHSPLQERDSRGRHGP  +YSSSWSLER SD KRRKK+HGDS  
Sbjct: 61  GRQEYRENDLRHKLDNRHSPLQERDSRGRHGP--QYSSSWSLERNSDHKRRKKDHGDSRT 120

Query: 121 DYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQ 180
           DY+G+LRI+DRSEERDREGKI SS+SRD LEGQLNKMQADIEMAEHH+HQAEVYL+EKIQ
Sbjct: 121 DYAGNLRITDRSEERDREGKI-SSSSRDTLEGQLNKMQADIEMAEHHRHQAEVYLDEKIQ 180

Query: 181 EVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------Q 240
           EVDSLTSRIQELESQLY EREEC+RIKSKIKKFVKAHNRY+ IQDELKR          Q
Sbjct: 181 EVDSLTSRIQELESQLYNEREECRRIKSKIKKFVKAHNRYSGIQDELKRSQFRLQQLGDQ 240

Query: 241 LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ 300
           L SDV+KIGANEEDSS+NIVSDGEDPGYHAA PL  L KD S+SK+K+HV QDIA NSK+
Sbjct: 241 LGSDVNKIGANEEDSSVNIVSDGEDPGYHAAGPLHHLHKDTSASKRKLHVDQDIAGNSKR 300

Query: 301 ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSV 360
           ADL KGSKEAV R +R SRWNAHPA+S+YSKIE V N+ ND IP ANES+QKRGK S+SV
Sbjct: 301 ADLHKGSKEAVGRLRRISRWNAHPAKSMYSKIEAVRNENNDYIPKANESRQKRGKASNSV 360

Query: 361 LTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPP 420
            TADK+R L++GVVVPLTSMAAHAV+E+VDIELEVNNEV++ R ++KE ASGS P LPPP
Sbjct: 361 STADKVRSLDAGVVVPLTSMAAHAVNEEVDIELEVNNEVSDRRESTKEAASGSAPLLPPP 420

Query: 421 PPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
             PI E NHSRYEGEDQN+DVEV+D+E + LDDA
Sbjct: 421 QSPIHEINHSRYEGEDQNIDVEVVDDESAGLDDA 434

[Close]

BLAST of MS022400 vs. TAIR 10
Match: AT3G21810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-47
Identity = 164/468 (35.04%), Postives = 248/468 (52.99%), Query Frame = 0


Query: 2   MVGRKLFKTKLCVLYQK-GRCSRPSCSFAHGSAELRRFAGGGGAYNG---NLPLYLRSFT 61
           M G  ++KTKLC+L+ K G CSRP+C+FAHG+AELRR   G  ++ G   N+   LR   
Sbjct: 1   MSGSSMYKTKLCILFNKTGDCSRPNCTFAHGNAELRR--PGESSFTGRRHNMDSDLR--- 60

Query: 62  MFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPR----GKYSSSWSLERQSDRKRRKK 121
               RR    SDLR +L  + SP + R S  R G R      + +S   E + D+  R+ 
Sbjct: 61  ---DRRHNMDSDLRDRLGRQFSP-ERRPSLDRSGRRVQRFSGHDNSMPFENRRDKDYREN 120

Query: 122 EHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEV 181
              D   DY+G L++ +R E+R  +G+       ++LE QL  ++ D++M    K + E 
Sbjct: 121 RRFDERRDYAGGLKVGNRIEDRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEA 180

Query: 182 YLEEKIQEVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR---- 241
            +E K  EVD LTSRIQELE+QL +E++EC+RI S  KKFVK +NR+ R QD+LKR    
Sbjct: 181 SVERKAHEVDILTSRIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKRSEAR 240

Query: 242 ------QLASDVSKIGANEEDSSINIVSDGEDPGYH---AASPLRDLQKDASSSKKKMHV 301
                 QL++ ++    N  D  ++IVSD E  G +   A  P  +LQ  +S S+KK +V
Sbjct: 241 LQKLGNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYV 300

Query: 302 IQDIAENSKQADLI-KGSKEAV-SRFKRFSRWNAHPAQSLYSKIETVGNKINDLI--PTA 361
            Q   +   +  LI +G +E V +  KR   WN   ++S YS+ E+      D I   ++
Sbjct: 301 DQYTTKEPVEDGLIGRGEEEKVENEKKRPPCWNMLSSKS-YSEEESGAWNDEDTINRSSS 360

Query: 362 NESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNS 421
            E   KR + S      DK        V+  TSMAA   D           +V E+   +
Sbjct: 361 KEDNWKRRRFSIGTSATDK--------VILSTSMAAREFD-----------DVAESEEEN 420

Query: 422 KEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA 445
            E A+GS     PPPPP R+ +  R   ++ +V+ +V+++++++ DD+
Sbjct: 421 PEAANGSPLISLPPPPPFRDAHVQR---DEDDVNGDVMEQKKAYDDDS 436

The following BLAST results are available for this feature:

BLAST of MS022400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136017.1	1.6e-225	93.83	zinc finger CCCH domain-containing protein 13 [Momordica charantia]	[more]
XP_022988786.1	1.6e-188	80.18	zinc finger CCCH domain-containing protein 40-like isoform X1 [Cucurbita maxima]	[more]
XP_022930759.1	1.6e-185	79.30	zinc finger CCCH domain-containing protein 40-like isoform X2 [Cucurbita moschat...	[more]
XP_023530203.1	5.2e-184	79.30	zinc finger CCCH domain-containing protein 40-like isoform X4 [Cucurbita pepo su...	[more]
XP_038887776.1	7.8e-180	76.04	zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida]	[more]

BLAST of MS022400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XW7	4.0e-46	35.04	Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6H7U2	2.9e-44	34.07	Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of MS022400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4D9	7.8e-226	93.83	zinc finger CCCH domain-containing protein 13 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1JI85	7.6e-189	80.18	zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1ESE6	7.8e-186	79.30	zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1GKR3	7.9e-178	75.33	zinc finger CCCH domain-containing protein 13-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1GKX5	3.0e-177	75.11	zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita mosch...	[more]

BLAST of MS022400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21810.1	2.9e-47	35.04	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..209
None	No IPR available	COILS	Coil	Coil	coord: 147..167
None	No IPR available	GENE3D	4.10.1000.10		coord: 2..37 e-value: 6.1E-8 score: 33.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..444
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..444
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..144
None	No IPR available	PANTHER	PTHR38160	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40	coord: 2..440
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 7..33 score: 12.380093

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS022400.1	MS022400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding