MS022232 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTCGTCCATGGGAAGATCTGCCAAAGGATGTTATGGAGAAAATTGGTTTGAATCTTAATTCAACTGATTACATTCATGCCTCTGTTGTTTGCAAATCATGGCTATCACTTTTACAATCTGATATTTCAAGACCTCAAATTCCTTGGATTTTGCTTCCTCGTCAATCAGATGACCATAGCCTAAAATTCTTCAACTTTTTGGAAGCCAAATATCACATCTTAAGGTTGCCTAAGGGTCTTGAAGGGGGATATATTTTTGGGAGTTCCAAAGGATGGCTTGTTGTTGTGTTTAGGAGAAGAAGAAGATCAGGATGGTACCATGTCTATCTTTTGAATCCAATCTCAGGTGTCAAGTGTAGGCTTCCGCCGCTTCCAAATTATATATCTCTT TCTCGTCCATGGGAAGATCTGCCAAAGGATGTTATGGAGAAAATTGGTTTGAATCTTAATTCAACTGATTACATTCATGCCTCTGTTGTTTGCAAATCATGGCTATCACTTTTACAATCTGATATTTCAAGACCTCAAATTCCTTGGATTTTGCTTCCTCGTCAATCAGATGACCATAGCCTAAAATTCTTCAACTTTTTGGAAGCCAAATATCACATCTTAAGGTTGCCTAAGGGTCTTGAAGGGGGATATATTTTTGGGAGTTCCAAAGGATGGCTTGTTGTTGTGTTTAGGAGAAGAAGAAGATCAGGATGGTACCATGTCTATCTTTTGAATCCAATCTCAGGTGTCAAGTGTAGGCTTCCGCCGCTTCCAAATTATATATCTCTT TCTCGTCCATGGGAAGATCTGCCAAAGGATGTTATGGAGAAAATTGGTTTGAATCTTAATTCAACTGATTACATTCATGCCTCTGTTGTTTGCAAATCATGGCTATCACTTTTACAATCTGATATTTCAAGACCTCAAATTCCTTGGATTTTGCTTCCTCGTCAATCAGATGACCATAGCCTAAAATTCTTCAACTTTTTGGAAGCCAAATATCACATCTTAAGGTTGCCTAAGGGTCTTGAAGGGGGATATATTTTTGGGAGTTCCAAAGGATGGCTTGTTGTTGTGTTTAGGAGAAGAAGAAGATCAGGATGGTACCATGTCTATCTTTTGAATCCAATCTCAGGTGTCAAGTGTAGGCTTCCGCCGCTTCCAAATTATATATCTCTT SRPWEDLPKDVMEKIGLNLNSTDYIHASVVCKSWLSLLQSDISRPQIPWILLPRQSDDHSLKFFNFLEAKYHILRLPKGLEGGYIFGSSKGWLVVVFRRRRRSGWYHVYLLNPISGVKCRLPPLPNYISL Homology
BLAST of MS022232 vs. NCBI nr
Match: XP_022155350.1 (uncharacterized protein LOC111022492 [Momordica charantia]) HSP 1 Score: 125.2 bits (313), Expect = 4.2e-25 Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 0
BLAST of MS022232 vs. NCBI nr
Match: KAE8055702.1 (hypothetical protein FH972_012527 [Carpinus fangiana]) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of MS022232 vs. NCBI nr
Match: KAE8008804.1 (hypothetical protein FH972_005279 [Carpinus fangiana]) HSP 1 Score: 109.8 bits (273), Expect = 1.8e-20 Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of MS022232 vs. NCBI nr
Match: KAE8008846.1 (hypothetical protein FH972_005319 [Carpinus fangiana]) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-19 Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of MS022232 vs. NCBI nr
Match: XP_004297987.1 (PREDICTED: uncharacterized protein LOC101310695 [Fragaria vesca subsp. vesca]) HSP 1 Score: 106.3 bits (264), Expect = 2.0e-19 Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of MS022232 vs. ExPASy Swiss-Prot
Match: Q9FVS1 (F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana OX=3702 GN=At1g57790 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.3e-08 Identity = 34/119 (28.57%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of MS022232 vs. ExPASy Swiss-Prot
Match: Q9LSA5 (F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana OX=3702 GN=At3g18720 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.4e-07 Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0
BLAST of MS022232 vs. ExPASy TrEMBL
Match: A0A6J1DM79 (uncharacterized protein LOC111022492 OS=Momordica charantia OX=3673 GN=LOC111022492 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 2.0e-25 Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 0
BLAST of MS022232 vs. ExPASy TrEMBL
Match: A0A5N6R432 (F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012527 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.8e-21 Identity = 54/124 (43.55%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of MS022232 vs. ExPASy TrEMBL
Match: A0A5N6QP56 (F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005279 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 8.9e-21 Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of MS022232 vs. ExPASy TrEMBL
Match: A0A5N6QPU6 (F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005319 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.7e-20 Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of MS022232 vs. ExPASy TrEMBL
Match: A0A5N6QRN4 (F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005278 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.8e-19 Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = 0
BLAST of MS022232 vs. TAIR 10
Match: AT1G57790.1 (F-box family protein ) HSP 1 Score: 58.5 bits (140), Expect = 4.5e-09 Identity = 34/119 (28.57%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of MS022232 vs. TAIR 10
Match: AT3G18720.1 (F-box family protein ) HSP 1 Score: 55.5 bits (132), Expect = 3.8e-08 Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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