MS022156 (gene) Bitter gourd (TR) v1

Overview
NameMS022156
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold47: 1283295 .. 1283564 (+)
RNA-Seq ExpressionMS022156
SyntenyMS022156
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAAAGAAAGAAAGAAAAAAAACACTTTCCAAAAGTGTCATTTAATCTCCAAACTTCTACAATCCAATACACAACTTTTCAATCCCAAAAAATCATACCCATTTTTGTTGTTATTATTTTTGCTCTCACTTGAAGTTTTACCATTTCCACAGCTGCAATCTTTACTATTCTGCAGCCCCAAACTGCAAAAGAAGCAAAGACTGCTTCTCCCTCCCTTCGCCGCCGCCGCCGCCGCCGGCGGGCTGATTCTGAGGTCGAGATTCAAGTCC

mRNA sequence

ATCAAAGAAAGAAAGAAAAAAAACACTTTCCAAAAGTGTCATTTAATCTCCAAACTTCTACAATCCAATACACAACTTTTCAATCCCAAAAAATCATACCCATTTTTGTTGTTATTATTTTTGCTCTCACTTGAAGTTTTACCATTTCCACAGCTGCAATCTTTACTATTCTGCAGCCCCAAACTGCAAAAGAAGCAAAGACTGCTTCTCCCTCCCTTCGCCGCCGCCGCCGCCGCCGGCGGGCTGATTCTGAGGTCGAGATTCAAGTCC

Coding sequence (CDS)

ATCAAAGAAAGAAAGAAAAAAAACACTTTCCAAAAGTGTCATTTAATCTCCAAACTTCTACAATCCAATACACAACTTTTCAATCCCAAAAAATCATACCCATTTTTGTTGTTATTATTTTTGCTCTCACTTGAAGTTTTACCATTTCCACAGCTGCAATCTTTACTATTCTGCAGCCCCAAACTGCAAAAGAAGCAAAGACTGCTTCTCCCTCCCTTCGCCGCCGCCGCCGCCGCCGGCGGGCTGATTCTGAGGTCGAGATTCAAGTCC

Protein sequence

IKERKKKNTFQKCHLISKLLQSNTQLFNPKKSYPFLLLLFLLSLEVLPFPQLQSLLFCSPKLQKKQRLLLPPFAAAAAAGGLILRSRFKS
Homology
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BLAST of MS022156 vs. ExPASy TrEMBL
Match: A0A0A0K5X8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G011820 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.3e-18
Identity = 62/92 (67.39%), Postives = 67/92 (72.83%), Query Frame = 0 

Query: 2  KERKKKNTFQKCHLISKLLQSNTQLFNPKKSYPFLLLLFLLSLEVLPFPQLQSLLFCSPK 61
          +++KKK    KCHLISKLLQS TQLFNPKKSYP  L L  L   +LPFPQLQ LLF +PK
Sbjct: 5  QKKKKKKEKIKCHLISKLLQSKTQLFNPKKSYP--LPLASLEAIILPFPQLQFLLFSNPK 64

Query: 62 LQKKQRLLLPPF---AAAAAAGGLILRSRFKS 91
          LQKKQRLLL  F     A   GGLILRSRFKS
Sbjct: 65 LQKKQRLLLTSFFIVTPAGYGGGLILRSRFKS 94

The following BLAST results are available for this feature:
BLAST of MS022156 vs.
Match NameE-valueIdentityDescription
BLAST of MS022156 vs.
Match NameE-valueIdentityDescription
BLAST of MS022156 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5X86.3e-1867.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G011820 PE=4 SV=1[more]
BLAST of MS022156 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS022156.1MS022156.1mRNA