MS022143 (gene) Bitter gourd (TR) v1

Overview
NameMS022143
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold47: 1207661 .. 1207838 (-)
RNA-Seq ExpressionMS022143
SyntenyMS022143
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGGCATCAATCTAAGAGAGCTGGCCACAGTCGGCAATTACGACGGGCTTCGAGGTCCTTCCAGAGCTCGATCCGACCTTCTCGACGGCCTTTACAACGTCCATGCCGTCAACAATTTGGCCGAACACGACGTGCTTCCCGTCGAGCCACTCGGTCTTGGCGGTGCAGATGAAGAAC

mRNA sequence

CAAGGCATCAATCTAAGAGAGCTGGCCACAGTCGGCAATTACGACGGGCTTCGAGGTCCTTCCAGAGCTCGATCCGACCTTCTCGACGGCCTTTACAACGTCCATGCCGTCAACAATTTGGCCGAACACGACGTGCTTTCGAGCCACTCGGTCTTGGCGGTGCAGATGAAGAAC

Coding sequence (CDS)

CAAGGCATCAATCTAAGAGAGCTGGCCACAGTCGGCAATTACGACGGGCTTCGAGGTCCTTCCAGAGCTCGATCCGACCTTCTCGACGGCCTTTACAACGTCCATGCCGTCAACAATTTGGCCGAACACGACGTGCTTTCGAGCCACTCGGTCTTGGCGGTGCAGATGAAGAAC

Protein sequence

QGINLRELATVGNYDGLRGPSRARSDLLDGLYNVHAVNNLAEHDVLSSHSVLAVQMKN
Homology
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BLAST of MS022143 vs. ExPASy TrEMBL
Match: A0A5K1AWF5 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS12759 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-04
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0 

Query: 7  ELATVGNYDGLRGPSRARSDLLDGLYNVHAVNNLAEHDVLS 48
          +LA VG+ DGLRGP+R R+DLL    +VH++++LAEHDVLS
Sbjct: 24 QLAAVGDNDGLRGPARGRADLLYRADDVHSLHDLAEHDVLS 64

The following BLAST results are available for this feature:
BLAST of MS022143 vs.
Match NameE-valueIdentityDescription
BLAST of MS022143 vs.
Match NameE-valueIdentityDescription
BLAST of MS022143 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5K1AWF54.4e-0460.98Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS12... [more]
BLAST of MS022143 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS022143.1MS022143.1mRNA