MS021979 (gene) Bitter gourd (TR) v1

Overview
NameMS021979
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPSI subunit V
Locationscaffold110: 788908 .. 790075 (+)
RNA-Seq ExpressionMS021979
SyntenyMS021979
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTGCAACCTCTCCCATAGCCAGCCAGCTCAGTTCCAGCTTTGCTTCTTCCAACACCAGAGCCCTAATCTCTCCGAAAGGCCTCTCCGCTTCGCCGCTCCGACGCGTCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGGTAAACAACTCCCATTTTGCAAATCTAAGTAATTTCATTGAATGTGTAGATAAAGCCATTGGTTTATTGAATTGCATATTAAGAGAGTGACTAGTATGAGGAAGTGCTTATGAGGAGAGTGATAAGTAAGAGAAAGTAAACATGTACTGAAAAGAGAGATTAACCAAATCAGGTGTAACAAAAATCATTTGTAGACATTAAGGAAAGAAATTGTGTAATGAAAGAGCCATTTCTTTATTGGATGATAAGAGTATGACAGTTTTATAATGATGTAAAATTATGTCCTATTTATACTAATCATTCAATAATTAACATATGATATACTCAATAAATGATTTACATTGAACATGCTTGTTGACTAGATTCAAATAACTGATTACCTAGTATATCTAATGTTAATTATTGGTTTGTTAGAGATGACAAAGAATTAGACCATATTTGCAATTAATTATCATTTGAATTTGGTTCATTTTTCAACCAGAATAGTATCCCATACCTGATTATGTTTCACTTGCAGCCCACTTACCAAGTGATCCAACCCATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCCTGGTACCTCTCAAATCTCCCAGCCTACAGAACAGCAGTCAGCCCACTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTTTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTGAGGAACACCGCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGCCTCATTGTCATTCTCAGCATCTGCTTGACAATGTATGGTGTTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCGTTGACCTTGACTGGCCGGAAGAAGGCCCCGGATCAGCTCCAAACAGCCGATGGATGGGCGAAATTCTCCGGCGGATTCTTCTTCGGAGGCATCTCCGGCGTCATCTGGGCCTACTTCCTCCTCTATGTCTTGGACCTCCCTTACTTCGTCAAG

mRNA sequence

ATGGCCACTGCAACCTCTCCCATAGCCAGCCAGCTCAGTTCCAGCTTTGCTTCTTCCAACACCAGAGCCCTAATCTCTCCGAAAGGCCTCTCCGCTTCGCCGCTCCGACGCGTCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCCACTTACCAAGTGATCCAACCCATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCCTGGTACCTCTCAAATCTCCCAGCCTACAGAACAGCAGTCAGCCCACTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTTTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTGAGGAACACCGCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGCCTCATTGTCATTCTCAGCATCTGCTTGACAATGTATGGTGTTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCGTTGACCTTGACTGGCCGGAAGAAGGCCCCGGATCAGCTCCAAACAGCCGATGGATGGGCGAAATTCTCCGGCGGATTCTTCTTCGGAGGCATCTCCGGCGTCATCTGGGCCTACTTCCTCCTCTATGTCTTGGACCTCCCTTACTTCGTCAAG

Coding sequence (CDS)

ATGGCCACTGCAACCTCTCCCATAGCCAGCCAGCTCAGTTCCAGCTTTGCTTCTTCCAACACCAGAGCCCTAATCTCTCCGAAAGGCCTCTCCGCTTCGCCGCTCCGACGCGTCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCCACTTACCAAGTGATCCAACCCATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCCTGGTACCTCTCAAATCTCCCAGCCTACAGAACAGCAGTCAGCCCACTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTTTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTGAGGAACACCGCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGCCTCATTGTCATTCTCAGCATCTGCTTGACAATGTATGGTGTTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCGTTGACCTTGACTGGCCGGAAGAAGGCCCCGGATCAGCTCCAAACAGCCGATGGATGGGCGAAATTCTCCGGCGGATTCTTCTTCGGAGGCATCTCCGGCGTCATCTGGGCCTACTTCCTCCTCTATGTCTTGGACCTCCCTTACTTCGTCAAG

Protein sequence

MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Homology
BLAST of MS021979 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 422.5 bits (1085), Expect = 2.1e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

BLAST of MS021979 vs. NCBI nr
Match: XP_022965497.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima])

HSP 1 Score: 417.2 bits (1071), Expect = 8.9e-113
Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

BLAST of MS021979 vs. NCBI nr
Match: XP_008441854.1 (PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

BLAST of MS021979 vs. NCBI nr
Match: XP_023536879.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538619.1 photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLS SPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

BLAST of MS021979 vs. NCBI nr
Match: XP_038889551.1 (photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida])

HSP 1 Score: 414.8 bits (1065), Expect = 4.4e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKNPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

BLAST of MS021979 vs. ExPASy Swiss-Prot
Match: Q39654 (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 4.9e-114
Identity = 209/217 (96.31%), Postives = 213/217 (98.16%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

BLAST of MS021979 vs. ExPASy Swiss-Prot
Match: Q9SUI4 (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 8.2e-93
Identity = 172/219 (78.54%), Postives = 195/219 (89.04%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRVPA-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQ 180
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYFVK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

BLAST of MS021979 vs. ExPASy Swiss-Prot
Match: Q41385 (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 5.9e-91
Identity = 169/219 (77.17%), Postives = 189/219 (86.30%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPA--RTHSFTIRAIQADKPTYQ 60
           MA  TSP+ASQL S F    T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPTYQ
Sbjct: 1   MAATTSPMASQLKSGF---TTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQ 180
           KAGPLRNT YAG AGSLAA GL+VILS+CLTMYG+ASF EGEPS AP+LTLTGRKK PDQ
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           LQ+ADGWAKF+GGFFFGG+SGV WA FL+YVLDLPY+ K
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

BLAST of MS021979 vs. ExPASy Swiss-Prot
Match: P23993 (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.1e-80
Identity = 154/218 (70.64%), Postives = 177/218 (81.19%), Query Frame = 0

Query: 1   MATA-TSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQV 60
           MATA   P+ASQ+  S       A   P+G+S + L R P     F ++A+++DKPTYQV
Sbjct: 1   MATAYAPPMASQVMKS-----GLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 120
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQL 180
            GPLRNT   G AG+L A GL+ ILS+CLTMYGVASFNEGEPSTAP LTLTGRKK  D+L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           QTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPYF K
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

BLAST of MS021979 vs. ExPASy Swiss-Prot
Match: Q6B8P4 (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui OX=285951 GN=psaL PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 75/148 (50.68%), Postives = 99/148 (66.89%), Query Frame = 0

Query: 60  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 119
           IQ  N DPF+G+L TPV++S      L+NLPAYR  +SPLLRG+E+G+AHG+FLVGPF K
Sbjct: 5   IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64

Query: 120 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQL 179
            GPLRNT  A  +G L+A GLI+IL++CL+MYG  SF++ +              A D L
Sbjct: 65  LGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDD--------------AKDLL 124

Query: 180 QTADGWAKFSGGFFFGGISGVIWAYFLL 208
           QT +GW +F+ GF  G + G  +AY LL
Sbjct: 125 QTTEGWGQFTAGFLVGAVGGSGFAYLLL 138

BLAST of MS021979 vs. ExPASy TrEMBL
Match: A0A6J1D7U0 (PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

BLAST of MS021979 vs. ExPASy TrEMBL
Match: A0A6J1HKH3 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.3e-113
Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

BLAST of MS021979 vs. ExPASy TrEMBL
Match: A0A1S3B555 (PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

BLAST of MS021979 vs. ExPASy TrEMBL
Match: A0A0A0LHJ8 (PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

BLAST of MS021979 vs. ExPASy TrEMBL
Match: A0A6J1FBZ4 (PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60
           MA+ATSPIASQLSS+F SSNTRALI+PKGLS SPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MASATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

BLAST of MS021979 vs. TAIR 10
Match: AT4G12800.1 (photosystem I subunit l )

HSP 1 Score: 341.3 bits (874), Expect = 5.8e-94
Identity = 172/219 (78.54%), Postives = 195/219 (89.04%), Query Frame = 0

Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRVPA-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQ 180
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYFVK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149833.12.1e-114100.00photosystem I reaction center subunit XI, chloroplastic [Momordica charantia][more]
XP_022965497.18.9e-11398.16photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima][more]
XP_008441854.12.6e-11297.70PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo... [more]
XP_023536879.12.6e-11297.70photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. p... [more]
XP_038889551.14.4e-11297.70photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q396544.9e-11496.31Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36... [more]
Q9SUI48.2e-9378.54Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ... [more]
Q413855.9e-9177.17Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=... [more]
P239936.1e-8070.64Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45... [more]
Q6B8P41.1e-3350.68Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui ... [more]
Match NameE-valueIdentityDescription
A0A6J1D7U01.0e-114100.00PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1[more]
A0A6J1HKH34.3e-11398.16PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1[more]
A0A1S3B5551.3e-11297.70PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1[more]
A0A0A0LHJ84.8e-11296.77PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1[more]
A0A6J1FBZ44.8e-11296.77PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G12800.15.8e-9478.54photosystem I subunit l [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003757Photosystem I PsaL, reaction centre subunit XIPFAMPF02605PsaLcoord: 59..211
e-value: 2.1E-58
score: 196.2
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyGENE3D1.20.1240.10Photosystem I PsaL, reaction centre subunit XIcoord: 54..217
e-value: 8.5E-73
score: 245.1
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilySUPERFAMILY81568Photosystem I reaction center subunit XI, PsaLcoord: 60..216
IPR022980Photosystem I, reaction centre subunit XIPANTHERPTHR34803FAMILY NOT NAMEDcoord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS021979.1MS021979.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009522 photosystem I
cellular_component GO:0009538 photosystem I reaction center