MS021963 (gene) Bitter gourd (TR) v1

Overview


Name	MS021963
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transcription elongation factor spt6
Location	scaffold110: 606708 .. 614772 (+)
RNA-Seq Expression	MS021963
Synteny	MS021963

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGAGGAATATGTGCTTGATGAAGATGACTATGAACTCCTTGAGGACAACAATATTACTATTCAACGGCCCAAGGTAGTGAATTTTGATAAGTCGCTTCTTATTATTTATTTCTAAGCACTTTTCTTCGCTCCCTTCTGGAGTTTGTATCTTTGAGCATTTGTTTCTTTTCATTTTATCAATCAGTGAAAGATTTTGTTTCTAGGTCAAATAAATTGTTTATTTCTAAGCATTTGGATTTTTTTTTCAGGGAAGCAAAAAGTTCAAGAGGCTTAAAAAAGCTCAAAGAGACAACGTGGAGCCTTCTGGGTTTTCTGATGATGAGGATTTTGTTGAAAGCAGTAGAGGCGGACGAACTGCCGAGGAAAAACTTAAACGTAGTTTGTTTGGTGATGATGAAGGTATGTGTACAGATTCATCTTTTTCTTACTTCCAACTTCTAACAGAACTACCACAGCTAGTTTCTAATTGACCTATCACTCATAATTATTTCTTAAATCCTTACGTAACTATTTGAAGCTCCACTTGAGGACATTGCGGAAGAGGAGGAACAACCTGAAGAGGAAGAAGACGTTGACATTGGAGATGAGGATGAAATGGCAGATTTCATTGTAGATGAAGAAGTTGATGAAGATGGGGCTCCCGTAAGGTAGATTTTCTTTCATACATTTAGGAACCTCAGACCTTTCCATTTCTAGTGTGTTCCATTTAATTCTTTTATTACCAATAATGATCTTATTGTACATGTTTAATCTCAATTTATTAACTGTTTGATCTAGGAGGAAGAAGTTAAAGAAAAAAAAGTCCAGACAAGCACCTGGTGTCTCATCAACTGCTTTGCAGGAGGCTCATGAAATTTTTGGGGATGTCGATGAGCTTCTTCAGCTTCGCAAGAGAGAATTGGATAGTCATGAGTGGCATGAAAAGAGATTAGAAGATGAATTTGAACCCATTGTAATTTCTGAGAAGTATATGACAGAAAAAGATGACCAGATAAGGGAGATTGACATACCTGAAAGAATGCAGGTTTCTTTTCATATCTGATATACCTTTGTATTGTATATGCCATCTTCATGGGTTTTTTCATTTTTATTGTCTTTATTTTAGATTTCAGAGGAAAGCACGGGTCCTCCTCCTATGGATGAGATTAGTCTGGAGGATGAGACCTCATGGATACATGGTCATCTTGCAAATGGAACAAACTCTCTGTTCGGCACAGCCAGTGGACAAGACCTATCTGTAGTAAAGGATGATATTCTGAGGTTTCTGGATCTTGTACATGTCCAAAAATTAGATGTCAGTATTATCTGATCTATTATGCTTATTGTTGTTCTCATTTTTACTTGTTCTAATATTTTGTATATTCTTCTTTCTTTTAGATACCATTCATCACCATGTATAGGAAGGAGGAGATTCTAAGCTTGTTAAAAGATACACAACATGAAGCCGTTGATGATCAGGGTAAAAATGAAAAAGCACCCACATTAAAGTGGCATAAGGTGAGTAAAACTGTGGTTGGAAGTAATTATTTCTTTACTTCCATGGATTAGAATGGTATGAAACATTTGTTTACTTTTCATTGTAGATACTTTGGGCAATCCAAGAATTGGACAAAAAGTGGCTGCTTCTTCAAAAGCGAAAAAATGCACTTCAATCATATTACAGTAAGCGATTTGAGGAGGAGTCACGTAGGATTTATGATGAAACTAGACTCTCTTTGAATAATCAACTTTTTGAGTCGGTCATGAAATCTCTCAAGGCAGCTGAATCAGAGAGGGAGGTAGATGATGTTGACTCAAAGTTTAATTTGCATTTTCCCCCTGGTGAAGTTGGTGTTGATGAAGGACAGTTCAAAAGGCCTAAGAGGAAATCACTGTACAGTATTTGTAGTAAGGCCGGCTTATGGGAGGTTGCAGGCAAGTTTGGCTATAGCTCCGAGCAATTTGGGTTGCAGCTCTCCTTAGAAAAGATGGTCAGTGTTCTTTGATATGATTTTGTCTGTAATAGTGAATATTCGAATAACACCTGTTCAATTTATTGTAGAGAAATGATGAGTTGGAGGATCCAAAGGAAACACCTGAAGAGATGGCATCAAACTTTACTTGTGCGATGTTTGAGACTCCTCAAGCTGTACTCAAAGGAGCCAGGCATATGGTAGTATAGTTTTGTTTTCGTAAATCTAGTCAAAGAATGCTGTATAGCATTATTCAGGGTCTTTACTGTCTCTTCATGTTATTTCAGGCAGCTATTGAGATTAGTTGTGAACCTTGTGTAAGGAAGCATGTTAGGAGCTACTTTATGGACTATGCCGTGATATCAACAAGTCCTACGCCAGATGGAAATGTAGCAATAGATTCCTTTCATCAGTTTTCAGTTGTTAAGTGGCTCCGTGAAAAGCCATTGAGTAGATTTGAGGATGCACAATGGCTCCTTATTCAGAAGGCCGAAGAAGAAAAACTTTTGAATGTCACTCTCAAGCTACCCGAAAAGCATCTAAATAAGTTGATAACTGATTTTAATGAATATTATCTCAGTGATGGTGTTAGCAAATCTGCTCAGCTATGGAATGAGCAGAGAAAGTTAATATTGCAGGATGCACTTTCTGGTTTTCTTCTGCCTTCAATGGAGAAAGAAGCAAGATCGCTGATGAATAGTAGAGCAAAAAACTGGTTACTTATGGAATATGGAAAGAGTTTGTGGAATAAAATATCTGTTGGTCCATATCAACACAAAGAAAATGATATTAGTTCTGATGAAGAAGCTGCCCCAAGGGTTATGGCATGTTGTTGGGGTCCTGGAAAGCCAGCTACCACCTTTGTGATGTTAGATTCATCAGGCGAGGTGCTGGATGTGCTTTACACTGGATCTCTCACCCTACGTTCTCAAAATGTGAATGACCAACAACGCAAGAAAAATGATCAAGAGCGAGTTTTGAAATTCATGACAGACCATCAACCACATGTTGTTGTTCTAGGAGCTGTTAATTTATCTTGTACCCGATTGAAAGATGACATTTACGAGGTTAGTGTTCCTACAGATAGTGGTGCTGGTCATTAAATTCTATAATGAGATTATAGTTTTCCCCTCTTTTAGGAACGGTCTGTGCTTGTCTAGCAGGGGAGTGAAGCACAAGGTTCATTTGAACTTTCTTTGATGTTATTCCACTACTATTGATGGCTTCAATTTTTTGGGGGGTTATAACTATGTCATATGTATGTCAATCTTTTCATTACAAAGGAGAATCACTTAATTATGCATATAAGCACATCATATCATGTTATTTATTCCAGATCAGATGGCAAGTACTATGTTATGCAATTGCTATTTTATTCTTTGATCAGATTATCTTTAAGATGGTGGAGGAGAATCCTAGAGACGTTGGACATGAGATGGATGGATTAAGCATTGTATATGGTGATGAGTCCCTCCCACGTCTGTATGAAAATTCTCGGATTTCCTCTGACCAATTGCAAGGGCAATCAGGTAGTACTTGTACGCTGAACTTTTTCTTATGTATTGATTTCTTTTCATTTTTAAACCCCTATTTTATTGGAAGTGGTCTTCTAATTTTTTTTGTCTCATCAGGCATTGTGAAGCGTGCTGTTGCTCTTGGACGTTATCTGCAAAATCCTCTGGCTATGGTTGCGACACTTTGTGGTCCAGGAAAGGAGATCTTATCTTGGAAACTAAATCCTTTGGAGAATTTTATGACCCCAGATGAAAAATATGGGATGGTCGAACAGGTTATGGTGGACGTGACCAACCAGGTTGGCCTGGACACTAATTTGGCTATAAGCCACGAATGGTTGTTCAGCCCATTGCAATTTATAGCTGGACTTGGACCTAGGAAGGCTGCTTCTTTGCAGAGATCCTTGGTGAGGGCTGGATCAATTTTCACACGTAAAGACTTTGTTACGGCACATGGTCTTGGTAAAAAGGTATTTGTTAACGCAGTTGGTTTCTTGCGTGTTAGGCGGAGTGGGTTGGCTGCAAGCAGCAGCCAATTTATTGATTTATTGGATGATACAAGAATTCATCCTGAATCTTATGCTCTGGCGCAAGAATTAGCGAAAGATGTTTTTGATGAAGATGTTAAAGGTGATGCTAATGATGATGAGGATGCAGAGATGGCCATAGAGCATGTTAGAGACCGGCCTCATTTACTGAGGACTCTTGATGTTGATGAATATGCCGCGAGCAAGAAACGGGAAGATAAAAGAGAGACTTTTCTTGACATAAAAAGAGAACTGATGCATGGTTTTCAGGATTGGCGTAAGCAATATGAAGAGCCCAGTCAGGATGAAGAGTTTTATATGATATCTGGTGAAACAGAGGATACCCTTGCGGAAGGGAGAATTGTCCAAGCTACAGTCCGCAAGGTACAAGGTCAAAGAGCAATTTGTGGTCTTGAATCTGGATTGACTGGGATGCTTATGAAAGAAGATTTTGCTGATGATTCTAGAGAGATTTCTGACTTATCTGATAGGTTGCATGAGGGGGATATTGTTACTTGCAAGATCAAATCGATTCAGAAAAATAGGTATCAGGTCTTCCTTGTTTGTAAGGAGAGTGAGATGAGAAGTAACCGAAACCAGATTACTCGAGATCTTGATCCCTATTATCATGAAGATCGAAGCAGCCTACAGAGTGAGCAAGAAAAGTCTCGGAAAGAGAAGGAACTCGCGAAAAAGCATTTCAAGCCAAGAATGATAGTTCATCCTCGCTTCAAGAATATAACAGCAGATGAAGCAATGGAGGTTTGTTTTTTTTCGAAAAAATATATTTTCTTGTTTTAAAATTTTGGTTGTACTTAAGTTGAGAGCCGGCTGTCACAACTAATGAAGATAAAAATGTGTAAGTGGTATATGCTTTATTGTTCAGTCACCTTAGAAGTCTTGAAAAAAAAAAAGAACGAACTTTCATCAAGTAAAATGAAGACGAACTACCCCCATACAGTAATCAAAAAGTAAAGGGAAGAAGAATCTTCGATGTTATATTTTTCTTCTTCAATTCTTAGATTCTTCAATTCTTCCTTTAAATTCTTTGATGAAGAAGAATCAAAGAAAAAAAAAGGAGAAGAATTAGTGGAAAAGGAAGAAGAAAAGTCAGAGGAAGACATGTGTGGAGAAAAAGTAGTAAAAAAGGATCAGGAGAATAGGAAGCCAAAAAAGAATCAAAAGAATTGGAAGAAGTTGCTCTGTCTCTCTCTTGTATTATCTGCGTTAATGTTACCGATATTTTATGCAAGAGGGAAGTGATTTGATTTCTATAATTTCATGGTTTGTGATGAATAATGAGTCTTCAAGGTATATGGTTTAGAATTGGTTGATTAACTTTTTAATGAATGATACTTCACGGACGCTTTATTCTCTTTTAGAGTCTTTTCTAACATTCTTTCTTTCTGGCAGTTCTTGTCTGACAAGGATCCTGGTGAAAGTATTGTTCGACCGAGTTCTCGTGGACCTTCTTTTTTGACTTTGACACTTAAAATTTATGATGGAGTATATGCTCATAAAGATATAGTTGAAGGTGGAAAGGAGCATAAAGACATCACTAGCTTGCTGCGCATCGGGAAGACCTTGAAAATTGGGGAGGACACTTTTGAAGATTTGGACGAGGTTAGTGTCTTGTTCTGGTAGCCATAGTGGACATCTTCAATGTGATTTGCGTCATGAGTTAAAGTATTACATTTATGGAACTGTTAATCTCTAAGATCTCTGCATCTTGGTATTATTTTATGATTTTTTAAATTCTGAAAATTTATCCGTCATCCTGTTCTCTCTATTGATTTTTTTCCCCAGCAAAATCCTCAAATCTTTTATTGAATAACCATCGCATGATTATGCATGAAATTTATACAGAACTTCTGTATTTCTTTATTTTTGTTGAAGTTGATATTACACCTCCATTGAATCCTTGTATACCCCTAAATGCAGGTGATGGATCGGTACGTTGATCCCTTAGTTTCCCACTTAAAGGCAATGCTTAGTTATCGCAAGTTCAGGAGGGGCACAAAAGCAGAAGTTGATGAACTTATGAGGATTGAGAAGTCAGAATATCCAATGAGAATAGTTTATGGTTTTGGAATTTCTCATGAGCATCCGGGTACATTCATTTTGACATACATACGAAGTACAAATCCACACCATGAGTATATTGGTCTCTACCCAAAGGGATTTAAATTTCGGAAAAGGATGTTTGAAGATATTGATAGGCTTGTGGCCTATTTTCAAAGGCACATTGATGATCCCCAGAATGACTCGGCACCATCAATCAGATCAGTTGCTGCAATGGTACCAATGCGGAGCCCTGCAACTGGTGGCTCTTCAGCAGCATCTGCAGGTAGTCCTTGGGGTGGTTCATCACATGATGGTGGCTGGAGAAGCCAGTCATCTGACAGGGATCGTTCTTCTACTCCTGGGTCTAGAACAGGTGAGGTCTACAATATGTTGCATTTCAAATTTTCATGTTGAATATTTATGAGAACTGTGAACTGCATTCAATTTACTTTTGTTCTTAGAGCGTTCATGTTGAATAACGTTTCTTGTTCTTAACAACTAGAGCTTCTTTGTCGTGATCCAGTCAGGCTATTTTCCTCTACTTAGTTCTCTCTCTAAAAGAGTTTTTATGATTTTTGTGCAAATCTGTGTCATTTGGGAGTTCTTTTTTCCCCGTTCTTTTGGTTTAATAGAATTCATGTGTGTATATAATATATATATATAGAAGCAGCCTGGTTGTTATTAGGGAAAGTAAAGGGACTTTGAGAGTGGATTTGAGTCTCATAGTGGCCACCAACCTAAATTCCATAAAATTTCTACGGAATAAGATTAAAATCCTGTCACAAATTTCTATAGAAAAAGATTCTGTCATGGCTGAATGTATAGATATTATTAACTAGTGAAAATAAGTGGTAACTTGGTTAAATTTATAAACCTCAGGTGGGATACAAACCAAAAGTTTACTGAACTCATTCAAATATTATTAATAAGTTATAATGTTCTAAATTAGATCGCATAAAGCTTTTCACTTCCTATAGGAGAATATAGATTACTTAACACATCAGTGTAATTTTTTTCCACGAATCACTATGTTCTTTTCCCTCTTACATTATGCCCATCATATGTTAGTAGTTTCAACGGTCAAGTAGTCTGGTTCATGCTAAACTCTACCTTGACAGGACTTGGCTAAGTCAATATAGCAACACCTAATATCTCTTGTATTTGCGTACTGTGTCTTAGTCTCTCATCAGTCTGTAGCAATAGGAATGACACGTCTAATGATCCAAAGCTTCATTCGGGTTTTTGCAAGCAGCTGTCTGGTGTTGGTGGGGGGAGTGTGAGGGGTGCTTCTGAGTTCTGAGGTTCATAATTGTCATTCTTTCTTAAAGTTTGCTCCTGTAAGAGTGTTTTCTTTTGGCATTGTCACCTTACGTTGATAAGTACATTTACAACTACAATATGAAAGATGTGGAAATTTGTGAATATTTTTTCGTTATCCTCGATTGGACTGGCTATGATTTTTACTCCAGTCGTAGATTGTTCTTTCTTGGTTGTTATTCCCTCATTCTTTTGGGAGATCTGGGTCCTGGTACAGATTCATATGGTTCGGTCCTGGTACCTAATTCATCTAACCTCCCATTTGTCTTTATTTTCTGCTTGCAGGGCGAAATGACAACAGAAATTCTGGTGGTCGTGATGGACATCCAAGTGGTCTGCCTAGGCCATATGGTGGACGTGGGCGTGGTCGAGGCTCGTATAATAATAATAGAGGGAATAACGTGAACAATGAGAGGCAAGATTCTAGCTATGATGGCTCCAGATGGGATTCAACTTCTAAGGATGGGGATGATGGATTAAGCAACTTCCCAGGAGCTAAAATTCAAAATTCACCAGGCAAAGAAGCCTTTCCTGGTGGCTGGGGCTCTGGTGGGAGTGGTGGTGGTGGTAACGGATGGAGCGATAGCGGTGGCGATGGTGGGGGCGGAGGCGGTTGGGGTGGAAGTGGTGGGAATTCCAAAGGAAATTGGGGTGGTTCTGGTGCAAGTAACAGTGGGGGGTGGGGTTCT

mRNA sequence

AGGGAGGAATATGTGCTTGATGAAGATGACTATGAACTCCTTGAGGACAACAATATTACTATTCAACGGCCCAAGGGAAGCAAAAAGTTCAAGAGGCTTAAAAAAGCTCAAAGAGACAACGTGGAGCCTTCTGGGTTTTCTGATGATGAGGATTTTGTTGAAAGCAGTAGAGGCGGACGAACTGCCGAGGAAAAACTTAAACGTAGTTTGTTTGGTGATGATGAAGCTCCACTTGAGGACATTGCGGAAGAGGAGGAACAACCTGAAGAGGAAGAAGACGTTGACATTGGAGATGAGGATGAAATGGCAGATTTCATTGTAGATGAAGAAGTTGATGAAGATGGGGCTCCCGTAAGGAGGAAGAAGTTAAAGAAAAAAAAGTCCAGACAAGCACCTGGTGTCTCATCAACTGCTTTGCAGGAGGCTCATGAAATTTTTGGGGATGTCGATGAGCTTCTTCAGCTTCGCAAGAGAGAATTGGATAGTCATGAGTGGCATGAAAAGAGATTAGAAGATGAATTTGAACCCATTGTAATTTCTGAGAAGTATATGACAGAAAAAGATGACCAGATAAGGGAGATTGACATACCTGAAAGAATGCAGATTTCAGAGGAAAGCACGGGTCCTCCTCCTATGGATGAGATTAGTCTGGAGGATGAGACCTCATGGATACATGGTCATCTTGCAAATGGAACAAACTCTCTGTTCGGCACAGCCAGTGGACAAGACCTATCTGTAGTAAAGGATGATATTCTGAGGTTTCTGGATCTTGTACATGTCCAAAAATTAGATATACCATTCATCACCATGTATAGGAAGGAGGAGATTCTAAGCTTGTTAAAAGATACACAACATGAAGCCGTTGATGATCAGGGTAAAAATGAAAAAGCACCCACATTAAAGTGGCATAAGATACTTTGGGCAATCCAAGAATTGGACAAAAAGTGGCTGCTTCTTCAAAAGCGAAAAAATGCACTTCAATCATATTACAGTAAGCGATTTGAGGAGGAGTCACGTAGGATTTATGATGAAACTAGACTCTCTTTGAATAATCAACTTTTTGAGTCGGTCATGAAATCTCTCAAGGCAGCTGAATCAGAGAGGGAGGTAGATGATGTTGACTCAAAGTTTAATTTGCATTTTCCCCCTGGTGAAGTTGGTGTTGATGAAGGACAGTTCAAAAGGCCTAAGAGGAAATCACTGTACAGTATTTGTAGTAAGGCCGGCTTATGGGAGGTTGCAGGCAAGTTTGGCTATAGCTCCGAGCAATTTGGGTTGCAGCTCTCCTTAGAAAAGATGAGAAATGATGAGTTGGAGGATCCAAAGGAAACACCTGAAGAGATGGCATCAAACTTTACTTGTGCGATGTTTGAGACTCCTCAAGCTGTACTCAAAGGAGCCAGGCATATGGCAGCTATTGAGATTAGTTGTGAACCTTGTGTAAGGAAGCATGTTAGGAGCTACTTTATGGACTATGCCGTGATATCAACAAGTCCTACGCCAGATGGAAATGTAGCAATAGATTCCTTTCATCAGTTTTCAGTTGTTAAGTGGCTCCGTGAAAAGCCATTGAGTAGATTTGAGGATGCACAATGGCTCCTTATTCAGAAGGCCGAAGAAGAAAAACTTTTGAATGTCACTCTCAAGCTACCCGAAAAGCATCTAAATAAGTTGATAACTGATTTTAATGAATATTATCTCAGTGATGGTGTTAGCAAATCTGCTCAGCTATGGAATGAGCAGAGAAAGTTAATATTGCAGGATGCACTTTCTGGTTTTCTTCTGCCTTCAATGGAGAAAGAAGCAAGATCGCTGATGAATAGTAGAGCAAAAAACTGGTTACTTATGGAATATGGAAAGAGTTTGTGGAATAAAATATCTGTTGGTCCATATCAACACAAAGAAAATGATATTAGTTCTGATGAAGAAGCTGCCCCAAGGGTTATGGCATGTTGTTGGGGTCCTGGAAAGCCAGCTACCACCTTTGTGATGTTAGATTCATCAGGCGAGGTGCTGGATGTGCTTTACACTGGATCTCTCACCCTACGTTCTCAAAATGTGAATGACCAACAACGCAAGAAAAATGATCAAGAGCGAGTTTTGAAATTCATGACAGACCATCAACCACATGTTGTTGTTCTAGGAGCTGTTAATTTATCTTGTACCCGATTGAAAGATGACATTTACGAGATTATCTTTAAGATGGTGGAGGAGAATCCTAGAGACGTTGGACATGAGATGGATGGATTAAGCATTGTATATGGTGATGAGTCCCTCCCACGTCTGTATGAAAATTCTCGGATTTCCTCTGACCAATTGCAAGGGCAATCAGGTAGCATTGTGAAGCGTGCTGTTGCTCTTGGACGTTATCTGCAAAATCCTCTGGCTATGGTTGCGACACTTTGTGGTCCAGGAAAGGAGATCTTATCTTGGAAACTAAATCCTTTGGAGAATTTTATGACCCCAGATGAAAAATATGGGATGGTCGAACAGGTTATGGTGGACGTGACCAACCAGGTTGGCCTGGACACTAATTTGGCTATAAGCCACGAATGGTTGTTCAGCCCATTGCAATTTATAGCTGGACTTGGACCTAGGAAGGCTGCTTCTTTGCAGAGATCCTTGGTGAGGGCTGGATCAATTTTCACACGTAAAGACTTTGTTACGGCACATGGTCTTGGTAAAAAGGTATTTGTTAACGCAGTTGGTTTCTTGCGTGTTAGGCGGAGTGGGTTGGCTGCAAGCAGCAGCCAATTTATTGATTTATTGGATGATACAAGAATTCATCCTGAATCTTATGCTCTGGCGCAAGAATTAGCGAAAGATGTTTTTGATGAAGATGTTAAAGGTGATGCTAATGATGATGAGGATGCAGAGATGGCCATAGAGCATGTTAGAGACCGGCCTCATTTACTGAGGACTCTTGATGTTGATGAATATGCCGCGAGCAAGAAACGGGAAGATAAAAGAGAGACTTTTCTTGACATAAAAAGAGAACTGATGCATGGTTTTCAGGATTGGCGTAAGCAATATGAAGAGCCCAGTCAGGATGAAGAGTTTTATATGATATCTGGTGAAACAGAGGATACCCTTGCGGAAGGGAGAATTGTCCAAGCTACAGTCCGCAAGGTACAAGGTCAAAGAGCAATTTGTGGTCTTGAATCTGGATTGACTGGGATGCTTATGAAAGAAGATTTTGCTGATGATTCTAGAGAGATTTCTGACTTATCTGATAGGTTGCATGAGGGGGATATTGTTACTTGCAAGATCAAATCGATTCAGAAAAATAGGTATCAGGTCTTCCTTGTTTGTAAGGAGAGTGAGATGAGAAGTAACCGAAACCAGATTACTCGAGATCTTGATCCCTATTATCATGAAGATCGAAGCAGCCTACAGAGTGAGCAAGAAAAGTCTCGGAAAGAGAAGGAACTCGCGAAAAAGCATTTCAAGCCAAGAATGATAGTTCATCCTCGCTTCAAGAATATAACAGCAGATGAAGCAATGGAGTTCTTGTCTGACAAGGATCCTGGTGAAAGTATTGTTCGACCGAGTTCTCGTGGACCTTCTTTTTTGACTTTGACACTTAAAATTTATGATGGAGTATATGCTCATAAAGATATAGTTGAAGGTGGAAAGGAGCATAAAGACATCACTAGCTTGCTGCGCATCGGGAAGACCTTGAAAATTGGGGAGGACACTTTTGAAGATTTGGACGAGGTGATGGATCGGTACGTTGATCCCTTAGTTTCCCACTTAAAGGCAATGCTTAGTTATCGCAAGTTCAGGAGGGGCACAAAAGCAGAAGTTGATGAACTTATGAGGATTGAGAAGTCAGAATATCCAATGAGAATAGTTTATGGTTTTGGAATTTCTCATGAGCATCCGGGTACATTCATTTTGACATACATACGAAGTACAAATCCACACCATGAGTATATTGGTCTCTACCCAAAGGGATTTAAATTTCGGAAAAGGATGTTTGAAGATATTGATAGGCTTGTGGCCTATTTTCAAAGGCACATTGATGATCCCCAGAATGACTCGGCACCATCAATCAGATCAGTTGCTGCAATGGTACCAATGCGGAGCCCTGCAACTGGTGGCTCTTCAGCAGCATCTGCAGGTAGTCCTTGGGGTGGTTCATCACATGATGGTGGCTGGAGAAGCCAGTCATCTGACAGGGATCGTTCTTCTACTCCTGGGTCTAGAACAGGGCGAAATGACAACAGAAATTCTGGTGGTCGTGATGGACATCCAAGTGGTCTGCCTAGGCCATATGGTGGACGTGGGCGTGGTCGAGGCTCGTATAATAATAATAGAGGGAATAACGTGAACAATGAGAGGCAAGATTCTAGCTATGATGGCTCCAGATGGGATTCAACTTCTAAGGATGGGGATGATGGATTAAGCAACTTCCCAGGAGCTAAAATTCAAAATTCACCAGGCAAAGAAGCCTTTCCTGGTGGCTGGGGCTCTGGTGGGAGTGGTGGTGGTGGTAACGGATGGAGCGATAGCGGTGGCGATGGTGGGGGCGGAGGCGGTTGGGGTGGAAGTGGTGGGAATTCCAAAGGAAATTGGGGTGGTTCTGGTGCAAGTAACAGTGGGGGGTGGGGTTCT

Coding sequence (CDS)

AGGGAGGAATATGTGCTTGATGAAGATGACTATGAACTCCTTGAGGACAACAATATTACTATTCAACGGCCCAAGGGAAGCAAAAAGTTCAAGAGGCTTAAAAAAGCTCAAAGAGACAACGTGGAGCCTTCTGGGTTTTCTGATGATGAGGATTTTGTTGAAAGCAGTAGAGGCGGACGAACTGCCGAGGAAAAACTTAAACGTAGTTTGTTTGGTGATGATGAAGCTCCACTTGAGGACATTGCGGAAGAGGAGGAACAACCTGAAGAGGAAGAAGACGTTGACATTGGAGATGAGGATGAAATGGCAGATTTCATTGTAGATGAAGAAGTTGATGAAGATGGGGCTCCCGTAAGGAGGAAGAAGTTAAAGAAAAAAAAGTCCAGACAAGCACCTGGTGTCTCATCAACTGCTTTGCAGGAGGCTCATGAAATTTTTGGGGATGTCGATGAGCTTCTTCAGCTTCGCAAGAGAGAATTGGATAGTCATGAGTGGCATGAAAAGAGATTAGAAGATGAATTTGAACCCATTGTAATTTCTGAGAAGTATATGACAGAAAAAGATGACCAGATAAGGGAGATTGACATACCTGAAAGAATGCAGATTTCAGAGGAAAGCACGGGTCCTCCTCCTATGGATGAGATTAGTCTGGAGGATGAGACCTCATGGATACATGGTCATCTTGCAAATGGAACAAACTCTCTGTTCGGCACAGCCAGTGGACAAGACCTATCTGTAGTAAAGGATGATATTCTGAGGTTTCTGGATCTTGTACATGTCCAAAAATTAGATATACCATTCATCACCATGTATAGGAAGGAGGAGATTCTAAGCTTGTTAAAAGATACACAACATGAAGCCGTTGATGATCAGGGTAAAAATGAAAAAGCACCCACATTAAAGTGGCATAAGATACTTTGGGCAATCCAAGAATTGGACAAAAAGTGGCTGCTTCTTCAAAAGCGAAAAAATGCACTTCAATCATATTACAGTAAGCGATTTGAGGAGGAGTCACGTAGGATTTATGATGAAACTAGACTCTCTTTGAATAATCAACTTTTTGAGTCGGTCATGAAATCTCTCAAGGCAGCTGAATCAGAGAGGGAGGTAGATGATGTTGACTCAAAGTTTAATTTGCATTTTCCCCCTGGTGAAGTTGGTGTTGATGAAGGACAGTTCAAAAGGCCTAAGAGGAAATCACTGTACAGTATTTGTAGTAAGGCCGGCTTATGGGAGGTTGCAGGCAAGTTTGGCTATAGCTCCGAGCAATTTGGGTTGCAGCTCTCCTTAGAAAAGATGAGAAATGATGAGTTGGAGGATCCAAAGGAAACACCTGAAGAGATGGCATCAAACTTTACTTGTGCGATGTTTGAGACTCCTCAAGCTGTACTCAAAGGAGCCAGGCATATGGCAGCTATTGAGATTAGTTGTGAACCTTGTGTAAGGAAGCATGTTAGGAGCTACTTTATGGACTATGCCGTGATATCAACAAGTCCTACGCCAGATGGAAATGTAGCAATAGATTCCTTTCATCAGTTTTCAGTTGTTAAGTGGCTCCGTGAAAAGCCATTGAGTAGATTTGAGGATGCACAATGGCTCCTTATTCAGAAGGCCGAAGAAGAAAAACTTTTGAATGTCACTCTCAAGCTACCCGAAAAGCATCTAAATAAGTTGATAACTGATTTTAATGAATATTATCTCAGTGATGGTGTTAGCAAATCTGCTCAGCTATGGAATGAGCAGAGAAAGTTAATATTGCAGGATGCACTTTCTGGTTTTCTTCTGCCTTCAATGGAGAAAGAAGCAAGATCGCTGATGAATAGTAGAGCAAAAAACTGGTTACTTATGGAATATGGAAAGAGTTTGTGGAATAAAATATCTGTTGGTCCATATCAACACAAAGAAAATGATATTAGTTCTGATGAAGAAGCTGCCCCAAGGGTTATGGCATGTTGTTGGGGTCCTGGAAAGCCAGCTACCACCTTTGTGATGTTAGATTCATCAGGCGAGGTGCTGGATGTGCTTTACACTGGATCTCTCACCCTACGTTCTCAAAATGTGAATGACCAACAACGCAAGAAAAATGATCAAGAGCGAGTTTTGAAATTCATGACAGACCATCAACCACATGTTGTTGTTCTAGGAGCTGTTAATTTATCTTGTACCCGATTGAAAGATGACATTTACGAGATTATCTTTAAGATGGTGGAGGAGAATCCTAGAGACGTTGGACATGAGATGGATGGATTAAGCATTGTATATGGTGATGAGTCCCTCCCACGTCTGTATGAAAATTCTCGGATTTCCTCTGACCAATTGCAAGGGCAATCAGGTAGCATTGTGAAGCGTGCTGTTGCTCTTGGACGTTATCTGCAAAATCCTCTGGCTATGGTTGCGACACTTTGTGGTCCAGGAAAGGAGATCTTATCTTGGAAACTAAATCCTTTGGAGAATTTTATGACCCCAGATGAAAAATATGGGATGGTCGAACAGGTTATGGTGGACGTGACCAACCAGGTTGGCCTGGACACTAATTTGGCTATAAGCCACGAATGGTTGTTCAGCCCATTGCAATTTATAGCTGGACTTGGACCTAGGAAGGCTGCTTCTTTGCAGAGATCCTTGGTGAGGGCTGGATCAATTTTCACACGTAAAGACTTTGTTACGGCACATGGTCTTGGTAAAAAGGTATTTGTTAACGCAGTTGGTTTCTTGCGTGTTAGGCGGAGTGGGTTGGCTGCAAGCAGCAGCCAATTTATTGATTTATTGGATGATACAAGAATTCATCCTGAATCTTATGCTCTGGCGCAAGAATTAGCGAAAGATGTTTTTGATGAAGATGTTAAAGGTGATGCTAATGATGATGAGGATGCAGAGATGGCCATAGAGCATGTTAGAGACCGGCCTCATTTACTGAGGACTCTTGATGTTGATGAATATGCCGCGAGCAAGAAACGGGAAGATAAAAGAGAGACTTTTCTTGACATAAAAAGAGAACTGATGCATGGTTTTCAGGATTGGCGTAAGCAATATGAAGAGCCCAGTCAGGATGAAGAGTTTTATATGATATCTGGTGAAACAGAGGATACCCTTGCGGAAGGGAGAATTGTCCAAGCTACAGTCCGCAAGGTACAAGGTCAAAGAGCAATTTGTGGTCTTGAATCTGGATTGACTGGGATGCTTATGAAAGAAGATTTTGCTGATGATTCTAGAGAGATTTCTGACTTATCTGATAGGTTGCATGAGGGGGATATTGTTACTTGCAAGATCAAATCGATTCAGAAAAATAGGTATCAGGTCTTCCTTGTTTGTAAGGAGAGTGAGATGAGAAGTAACCGAAACCAGATTACTCGAGATCTTGATCCCTATTATCATGAAGATCGAAGCAGCCTACAGAGTGAGCAAGAAAAGTCTCGGAAAGAGAAGGAACTCGCGAAAAAGCATTTCAAGCCAAGAATGATAGTTCATCCTCGCTTCAAGAATATAACAGCAGATGAAGCAATGGAGTTCTTGTCTGACAAGGATCCTGGTGAAAGTATTGTTCGACCGAGTTCTCGTGGACCTTCTTTTTTGACTTTGACACTTAAAATTTATGATGGAGTATATGCTCATAAAGATATAGTTGAAGGTGGAAAGGAGCATAAAGACATCACTAGCTTGCTGCGCATCGGGAAGACCTTGAAAATTGGGGAGGACACTTTTGAAGATTTGGACGAGGTGATGGATCGGTACGTTGATCCCTTAGTTTCCCACTTAAAGGCAATGCTTAGTTATCGCAAGTTCAGGAGGGGCACAAAAGCAGAAGTTGATGAACTTATGAGGATTGAGAAGTCAGAATATCCAATGAGAATAGTTTATGGTTTTGGAATTTCTCATGAGCATCCGGGTACATTCATTTTGACATACATACGAAGTACAAATCCACACCATGAGTATATTGGTCTCTACCCAAAGGGATTTAAATTTCGGAAAAGGATGTTTGAAGATATTGATAGGCTTGTGGCCTATTTTCAAAGGCACATTGATGATCCCCAGAATGACTCGGCACCATCAATCAGATCAGTTGCTGCAATGGTACCAATGCGGAGCCCTGCAACTGGTGGCTCTTCAGCAGCATCTGCAGGTAGTCCTTGGGGTGGTTCATCACATGATGGTGGCTGGAGAAGCCAGTCATCTGACAGGGATCGTTCTTCTACTCCTGGGTCTAGAACAGGGCGAAATGACAACAGAAATTCTGGTGGTCGTGATGGACATCCAAGTGGTCTGCCTAGGCCATATGGTGGACGTGGGCGTGGTCGAGGCTCGTATAATAATAATAGAGGGAATAACGTGAACAATGAGAGGCAAGATTCTAGCTATGATGGCTCCAGATGGGATTCAACTTCTAAGGATGGGGATGATGGATTAAGCAACTTCCCAGGAGCTAAAATTCAAAATTCACCAGGCAAAGAAGCCTTTCCTGGTGGCTGGGGCTCTGGTGGGAGTGGTGGTGGTGGTAACGGATGGAGCGATAGCGGTGGCGATGGTGGGGGCGGAGGCGGTTGGGGTGGAAGTGGTGGGAATTCCAAAGGAAATTGGGGTGGTTCTGGTGCAAGTAACAGTGGGGGGTGGGGTTCT

Protein sequence

REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASGQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGNGWSDSGGDGGGGGGWGGSGGNSKGNWGGSGASNSGGWGS

Homology

[Close]

BLAST of MS021963 vs. NCBI nr
Match: XP_022149910.1 (transcription elongation factor SPT6 homolog [Momordica charantia])

HSP 1 Score: 2977.6 bits (7718), Expect = 0.0e+00
Identity = 1536/1541 (99.68%), Postives = 1538/1541 (99.81%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR
Sbjct: 83   KEEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 142

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR
Sbjct: 143  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 202

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS
Sbjct: 203  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 262

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS 240
            EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS
Sbjct: 263  EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS 322

Query: 241  GQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL 300
            GQDLSVVKDDILRFLDLVH+QKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL
Sbjct: 323  GQDLSVVKDDILRFLDLVHIQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL 382

Query: 301  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 360
            KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS
Sbjct: 383  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 442

Query: 361  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 420
            LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS
Sbjct: 443  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 502

Query: 421  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 480
            SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC
Sbjct: 503  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 562

Query: 481  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 540
            VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE
Sbjct: 563  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 622

Query: 541  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 600
            EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK
Sbjct: 623  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 682

Query: 601  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 660
            EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT
Sbjct: 683  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 742

Query: 661  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 720
            TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS
Sbjct: 743  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 802

Query: 721  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 780
            CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG I
Sbjct: 803  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG-I 862

Query: 781  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 840
            VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV
Sbjct: 863  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 922

Query: 841  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 900
            GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN
Sbjct: 923  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 982

Query: 901  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 960
            AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM
Sbjct: 983  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 1042

Query: 961  AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF 1020
            AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF
Sbjct: 1043 AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF 1102

Query: 1021 YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL 1080
            YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL
Sbjct: 1103 YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL 1162

Query: 1081 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK 1140
            HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK
Sbjct: 1163 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK 1222

Query: 1141 EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1200
            EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG
Sbjct: 1223 EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1282

Query: 1201 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK 1260
            VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK
Sbjct: 1283 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK 1342

Query: 1261 FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1320
            FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF
Sbjct: 1343 FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1402

Query: 1321 KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1380
            KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG
Sbjct: 1403 KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1462

Query: 1381 SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1440
            SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR
Sbjct: 1463 SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1522

Query: 1441 GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGN 1500
            GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGN
Sbjct: 1523 GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGN 1582

Query: 1501 GWSDSGGD--GGGGGGWGGSGGNSKGNWGGSGASNSGGWGS 1540
            GWSDSGGD  GGGGGGWGGSGGNSKGNWGGSGASNSGGWGS
Sbjct: 1583 GWSDSGGDGGGGGGGGWGGSGGNSKGNWGGSGASNSGGWGS 1622

[Close]

BLAST of MS021963 vs. NCBI nr
Match: XP_008441794.1 (PREDICTED: transcription elongation factor SPT6 [Cucumis melo])

HSP 1 Score: 2805.4 bits (7271), Expect = 0.0e+00
Identity = 1449/1545 (93.79%), Postives = 1492/1545 (96.57%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDN+EPSGFSDDEDFVESSRGGR
Sbjct: 75   KEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGR 134

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEE DEDGAP+RR
Sbjct: 135  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEEDEDGAPIRR 194

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+ EW EKRLEDEFEPIVIS
Sbjct: 195  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQEWREKRLEDEFEPIVIS 254

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS 240
            EKYMTEKDDQIREIDIPERMQISEESTG PP D+ SL+DE SWIHGH+ANG NSLF  AS
Sbjct: 255  EKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASWIHGHIANGMNSLFSNAS 314

Query: 241  GQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL 300
            GQDLSV KDDILR+LDLVHVQKLDIPFI MYRKEEILSLLKD +HEA DDQ KN+KAPTL
Sbjct: 315  GQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDIEHEAGDDQDKNDKAPTL 374

Query: 301  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 360
            +WHK+LWAIQ+LDKKWLLLQKRK ALQSYY  R+ EE R     TR +LN QLF+SV +S
Sbjct: 375  RWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRS 434

Query: 361  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 420
            L+AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS
Sbjct: 435  LEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 494

Query: 421  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 480
            SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAVLKGARHMAAIEISCEPC
Sbjct: 495  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPC 554

Query: 481  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 540
            VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE
Sbjct: 555  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 614

Query: 541  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 600
            EKLLNVTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK
Sbjct: 615  EKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 674

Query: 601  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 660
            EARSLM S+AK WLLMEYGK+LW+K+S+GPYQHKENDISSDEEAAPRVMACCWGPGKPAT
Sbjct: 675  EARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 734

Query: 661  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 720
            TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS
Sbjct: 735  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 794

Query: 721  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 780
            CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG I
Sbjct: 795  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG-I 854

Query: 781  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 840
            VKRAVALGRYLQNPLAMVATLCGPG+EILSWKLNPLENF+TPDEKYGMVEQVMVDVTNQV
Sbjct: 855  VKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQV 914

Query: 841  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 900
            GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN
Sbjct: 915  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 974

Query: 901  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 960
            AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM
Sbjct: 975  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 1034

Query: 961  AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF 1020
            AIEHVRDRPHLLRTLDVDEYA SKKREDK ETFLDIKRELM GFQDWRKQYEEPSQDEEF
Sbjct: 1035 AIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEF 1094

Query: 1021 YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL 1080
            YMISGETEDTLAEGRIVQATVRKV GQ+AICGLESGLTGMLMKED+ADDSREISDLSDRL
Sbjct: 1095 YMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYADDSREISDLSDRL 1154

Query: 1081 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK 1140
             EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+QIT++LDPYYHEDRSSLQSEQEKSRK
Sbjct: 1155 REGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRK 1214

Query: 1141 EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1200
            EKELAKKHFKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIYDG
Sbjct: 1215 EKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1274

Query: 1201 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK 1260
            VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLKAMLSYRK
Sbjct: 1275 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRK 1334

Query: 1261 FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1320
            FRRGTKAEVDELMRIEKSEYPMRI+YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF
Sbjct: 1335 FRRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1394

Query: 1321 KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1380
            KFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG
Sbjct: 1395 KFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1454

Query: 1381 SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1440
            SSH+GGWRSQS DRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR
Sbjct: 1455 SSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1514

Query: 1441 GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGW---GSGGSGG 1500
            G   NN+R DS YDGSRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW   GSGG GG
Sbjct: 1515 G---NNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGG 1574

Query: 1501 GGNGWSDS-GGDGG--GGGGWGGSGGNSKGNWGGSGASNSGGWGS 1540
            GGNGW+DS GG GG  GGGGWGG+GGNSKGNWGGSG SNSGGWGS
Sbjct: 1575 GGNGWNDSTGGSGGGSGGGGWGGTGGNSKGNWGGSGGSNSGGWGS 1615

[Close]

BLAST of MS021963 vs. NCBI nr
Match: TYK28898.1 (transcription elongation factor SPT6 [Cucumis melo var. makuwa])

HSP 1 Score: 2804.6 bits (7269), Expect = 0.0e+00
Identity = 1449/1544 (93.85%), Postives = 1491/1544 (96.57%), Query Frame = 0


Query: 2    EEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRT 61
            EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDN+EPSGFSDDEDFVESSRGGRT
Sbjct: 61   EEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGRT 120

Query: 62   AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 121
            AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEE DEDGAP+RRK
Sbjct: 121  AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEEDEDGAPIRRK 180

Query: 122  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 181
            KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+ EW EKRLEDEFEPIVISE
Sbjct: 181  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQEWREKRLEDEFEPIVISE 240

Query: 182  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 241
            KYMTEKDDQIREIDIPERMQISEESTG PP D+ SL+DE SWIHGH+ANG NSLF  ASG
Sbjct: 241  KYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASWIHGHIANGMNSLFSNASG 300

Query: 242  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLK 301
            QDLSV KDDILR+LDLVHVQKLDIPFI MYRKEEILSLLKD +HEA DDQ KN+KAPTL+
Sbjct: 301  QDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDIEHEAGDDQDKNDKAPTLR 360

Query: 302  WHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKSL 361
            WHK+LWAIQ+LDKKWLLLQKRK ALQSYY  R+ EE R     TR +LN QLF+SV +SL
Sbjct: 361  WHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRSL 420

Query: 362  KAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 421
            +AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS
Sbjct: 421  EAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 480

Query: 422  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCV 481
            EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAVLKGARHMAAIEISCEPCV
Sbjct: 481  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPCV 540

Query: 482  RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 541
            RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE
Sbjct: 541  RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 600

Query: 542  KLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 601
            KLLNVTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE
Sbjct: 601  KLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 660

Query: 602  ARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 661
            ARSLM S+AK WLLMEYGK+LW+K+S+GPYQHKENDISSDEEAAPRVMACCWGPGKPATT
Sbjct: 661  ARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 720

Query: 662  FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 721
            FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC
Sbjct: 721  FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 780

Query: 722  TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSIV 781
            TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG IV
Sbjct: 781  TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG-IV 840

Query: 782  KRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQVG 841
            KRAVALGRYLQNPLAMVATLCGPG+EILSWKLNPLENF+TPDEKYGMVEQVMVDVTNQVG
Sbjct: 841  KRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQVG 900

Query: 842  LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA 901
            LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA
Sbjct: 901  LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA 960

Query: 902  VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMA 961
            VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMA
Sbjct: 961  VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMA 1020

Query: 962  IEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEFY 1021
            IEHVRDRPHLLRTLDVDEYA SKKREDK ETFLDIKRELM GFQDWRKQYEEPSQDEEFY
Sbjct: 1021 IEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFY 1080

Query: 1022 MISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRLH 1081
            MISGETEDTLAEGRIVQATVRKV GQ+AICGLESGLTGMLMKED+ADDSREISDLSDRL 
Sbjct: 1081 MISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYADDSREISDLSDRLR 1140

Query: 1082 EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRKE 1141
            EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+QIT++LDPYYHEDRSSLQSEQEKSRKE
Sbjct: 1141 EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRKE 1200

Query: 1142 KELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDGV 1201
            KELAKKHFKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIYDGV
Sbjct: 1201 KELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDGV 1260

Query: 1202 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRKF 1261
            YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLKAMLSYRKF
Sbjct: 1261 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKF 1320

Query: 1262 RRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1321
            RRGTKAEVDELMRIEKSEYPMRI+YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK
Sbjct: 1321 RRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1380

Query: 1322 FRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS 1381
            FRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS
Sbjct: 1381 FRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS 1440

Query: 1382 SHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRG 1441
            SH+GGWRSQS DRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRG
Sbjct: 1441 SHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRG 1500

Query: 1442 NNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGW---GSGGSGGG 1501
               NN+R DS YDGSRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW   GSGG GGG
Sbjct: 1501 ---NNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGGG 1560

Query: 1502 GNGWSDS-GGDGG--GGGGWGGSGGNSKGNWGGSGASNSGGWGS 1540
            GNGW+DS GG GG  GGGGWGG+GGNSKGNWGGSG SNSGGWGS
Sbjct: 1561 GNGWNDSTGGSGGGSGGGGWGGTGGNSKGNWGGSGGSNSGGWGS 1600

[Close]

BLAST of MS021963 vs. NCBI nr
Match: XP_023537141.1 (transcription elongation factor SPT6 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2798.8 bits (7254), Expect = 0.0e+00
Identity = 1444/1544 (93.52%), Postives = 1497/1544 (96.96%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDNVEPSGFSDDEDFVESSRGGR
Sbjct: 83   KEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGGR 142

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEEVDEDGAP+RR
Sbjct: 143  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRR 202

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            +KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+HEW EKRLEDEFEPIVIS
Sbjct: 203  RKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVIS 262

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPP-MDEISLEDETSWIHGHLANGTNSLFGTA 240
            EKYMTEKDDQIREID+PERMQISEESTGPPP MDE   ++E SWIHGH+ANG NSLFG A
Sbjct: 263  EKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNA 322

Query: 241  SGQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPT 300
            SGQDLSV K DILRFLDLVHVQKLDIPFI MYRKEEILSLLKDT+HE+ DDQ +NEK P+
Sbjct: 323  SGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPS 382

Query: 301  LKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMK 360
            LKWHKILWAIQ+LDKKWLLLQKRKNAL+SYY KR +EE+ RIYDETRLSLN QLF+S+MK
Sbjct: 383  LKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSIMK 442

Query: 361  SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY 420
            SLKAAES+REVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY
Sbjct: 443  SLKAAESDREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY 502

Query: 421  SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP 480
            SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP
Sbjct: 503  SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP 562

Query: 481  CVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAE 540
            CVRKHVRSY+MDYAVISTSPT DGNV IDSFHQFS VKWLREKPLSRFEDAQWLLIQKAE
Sbjct: 563  CVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAE 622

Query: 541  EEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME 600
            EEKLLNVTLKLPEKHLNKLI DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME
Sbjct: 623  EEKLLNVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME 682

Query: 601  KEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPA 660
            KEAR+LM S++KNWLLMEYGK+LWNK+SVGPYQHKENDISSDEEAAPRVMACCWGPGKPA
Sbjct: 683  KEARTLMTSKSKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPA 742

Query: 661  TTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL 720
            TTFVMLDS+GEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL
Sbjct: 743  TTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL 802

Query: 721  SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGS 780
            SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRIS+DQLQGQSG 
Sbjct: 803  SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISADQLQGQSG- 862

Query: 781  IVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQ 840
            IVKRAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+TPD+KYGMVEQVMV+VTNQ
Sbjct: 863  IVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQ 922

Query: 841  VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV 900
            VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV
Sbjct: 923  VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV 982

Query: 901  NAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAE 960
            NAVGFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVFDEDVKGDANDDEDAE
Sbjct: 983  NAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAE 1042

Query: 961  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1020
            MAIEHVRDRPHLLRTLDVDEY+ SK REDKR+TFLDIKRELM GFQDWRKQYEEPSQDEE
Sbjct: 1043 MAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEE 1102

Query: 1021 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1080
            FYMISGETEDTLAEG+IVQATVRKVQGQRAICGLESGLTGMLMKED+ADDSR+ISDLSDR
Sbjct: 1103 FYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYADDSRDISDLSDR 1162

Query: 1081 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1140
            LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+Q+TR+LDPYYHEDRSSLQSEQ+KSR
Sbjct: 1163 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSR 1222

Query: 1141 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1200
            KEKELAKK FKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIY+
Sbjct: 1223 KEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYN 1282

Query: 1201 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1260
            GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLK MLSYR
Sbjct: 1283 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYR 1342

Query: 1261 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1320
            KFR+GTKAEVDELM+IEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG
Sbjct: 1343 KFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1402

Query: 1321 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1380
            FKFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG
Sbjct: 1403 FKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1462

Query: 1381 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNN 1440
            GSSHDGGWRSQS DRDRSSTPGSRTGRNDNRNSG RDGHPSGLPRPYGGRGRGRGSYNNN
Sbjct: 1463 GSSHDGGWRSQSYDRDRSSTPGSRTGRNDNRNSGSRDGHPSGLPRPYGGRGRGRGSYNNN 1522

Query: 1441 RGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGS-GGG 1500
            RG   NNER DSSYD SRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW SGGS GGG
Sbjct: 1523 RG---NNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGG 1582

Query: 1501 GNGWSDSGGDGGGGGGWGGSGGNSKGNW---GGSGASNSGGWGS 1540
            GNG SDS G GGGGGGWGG+GGNSKGNW   GGSG SNSGGWGS
Sbjct: 1583 GNGLSDS-GSGGGGGGWGGTGGNSKGNWGGGGGSGPSNSGGWGS 1621

[Close]

BLAST of MS021963 vs. NCBI nr
Match: XP_023537140.1 (transcription elongation factor SPT6 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2794.2 bits (7242), Expect = 0.0e+00
Identity = 1444/1545 (93.46%), Postives = 1497/1545 (96.89%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPK-GSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGG 60
            +EEYVLDEDDYELLEDNNI+IQRPK GSKKFKRLKKA+RDNVEPSGFSDDEDFVESSRGG
Sbjct: 83   KEEYVLDEDDYELLEDNNISIQRPKVGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGG 142

Query: 61   RTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVR 120
            RTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEEVDEDGAP+R
Sbjct: 143  RTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLR 202

Query: 121  RKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVI 180
            R+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+HEW EKRLEDEFEPIVI
Sbjct: 203  RRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVI 262

Query: 181  SEKYMTEKDDQIREIDIPERMQISEESTGPPP-MDEISLEDETSWIHGHLANGTNSLFGT 240
            SEKYMTEKDDQIREID+PERMQISEESTGPPP MDE   ++E SWIHGH+ANG NSLFG 
Sbjct: 263  SEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGN 322

Query: 241  ASGQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAP 300
            ASGQDLSV K DILRFLDLVHVQKLDIPFI MYRKEEILSLLKDT+HE+ DDQ +NEK P
Sbjct: 323  ASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTP 382

Query: 301  TLKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVM 360
            +LKWHKILWAIQ+LDKKWLLLQKRKNAL+SYY KR +EE+ RIYDETRLSLN QLF+S+M
Sbjct: 383  SLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSIM 442

Query: 361  KSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFG 420
            KSLKAAES+REVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFG
Sbjct: 443  KSLKAAESDREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFG 502

Query: 421  YSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCE 480
            YSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCE
Sbjct: 503  YSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCE 562

Query: 481  PCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKA 540
            PCVRKHVRSY+MDYAVISTSPT DGNV IDSFHQFS VKWLREKPLSRFEDAQWLLIQKA
Sbjct: 563  PCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKA 622

Query: 541  EEEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSM 600
            EEEKLLNVTLKLPEKHLNKLI DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSM
Sbjct: 623  EEEKLLNVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSM 682

Query: 601  EKEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKP 660
            EKEAR+LM S++KNWLLMEYGK+LWNK+SVGPYQHKENDISSDEEAAPRVMACCWGPGKP
Sbjct: 683  EKEARTLMTSKSKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKP 742

Query: 661  ATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVN 720
            ATTFVMLDS+GEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVN
Sbjct: 743  ATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVN 802

Query: 721  LSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG 780
            LSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRIS+DQLQGQSG
Sbjct: 803  LSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISADQLQGQSG 862

Query: 781  SIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTN 840
             IVKRAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+TPD+KYGMVEQVMV+VTN
Sbjct: 863  -IVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTN 922

Query: 841  QVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVF 900
            QVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVF
Sbjct: 923  QVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVF 982

Query: 901  VNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA 960
            VNAVGFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVFDEDVKGDANDDEDA
Sbjct: 983  VNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDA 1042

Query: 961  EMAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDE 1020
            EMAIEHVRDRPHLLRTLDVDEY+ SK REDKR+TFLDIKRELM GFQDWRKQYEEPSQDE
Sbjct: 1043 EMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDE 1102

Query: 1021 EFYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSD 1080
            EFYMISGETEDTLAEG+IVQATVRKVQGQRAICGLESGLTGMLMKED+ADDSR+ISDLSD
Sbjct: 1103 EFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYADDSRDISDLSD 1162

Query: 1081 RLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKS 1140
            RLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+Q+TR+LDPYYHEDRSSLQSEQ+KS
Sbjct: 1163 RLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKS 1222

Query: 1141 RKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIY 1200
            RKEKELAKK FKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIY
Sbjct: 1223 RKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIY 1282

Query: 1201 DGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSY 1260
            +GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLK MLSY
Sbjct: 1283 NGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSY 1342

Query: 1261 RKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK 1320
            RKFR+GTKAEVDELM+IEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK
Sbjct: 1343 RKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK 1402

Query: 1321 GFKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPW 1380
            GFKFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPW
Sbjct: 1403 GFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPW 1462

Query: 1381 GGSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNN 1440
            GGSSHDGGWRSQS DRDRSSTPGSRTGRNDNRNSG RDGHPSGLPRPYGGRGRGRGSYNN
Sbjct: 1463 GGSSHDGGWRSQSYDRDRSSTPGSRTGRNDNRNSGSRDGHPSGLPRPYGGRGRGRGSYNN 1522

Query: 1441 NRGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGS-GG 1500
            NRG   NNER DSSYD SRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW SGGS GG
Sbjct: 1523 NRG---NNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGG 1582

Query: 1501 GGNGWSDSGGDGGGGGGWGGSGGNSKGNW---GGSGASNSGGWGS 1540
            GGNG SDS G GGGGGGWGG+GGNSKGNW   GGSG SNSGGWGS
Sbjct: 1583 GGNGLSDS-GSGGGGGGWGGTGGNSKGNWGGGGGSGPSNSGGWGS 1622

[Close]

BLAST of MS021963 vs. ExPASy Swiss-Prot
Match: A8MS85 (Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=SPT6 PE=1 SV=1)

HSP 1 Score: 2013.4 bits (5215), Expect = 0.0e+00
Identity = 1103/1563 (70.57%), Postives = 1263/1563 (80.81%), Query Frame = 0


Query: 6    LDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGG--RTAE 65
            LDEDDY LL+DNN+  ++    +++KRLKKAQR+     G S D++F   SRGG  R+AE
Sbjct: 89   LDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQGESSDDEF--DSRGGTRRSAE 148

Query: 66   EKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 125
            +K+K  LF D +   P +D+ +EE+   EE+ V  G EDEMADFIVDE  D++  P +R 
Sbjct: 149  DKIKDRLFDDVDVDDPPDDVGDEEDLVVEEDVV--GSEDEMADFIVDE--DDEHGPPKRG 208

Query: 126  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 185
              KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L S++  E+RLEDEFEP V+SE
Sbjct: 209  NSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQRMERRLEDEFEPTVLSE 268

Query: 186  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 245
            KYMT  DD+IR++DIPERMQISEESTG PP+DEIS+E+E++WI+  LA+      GT  G
Sbjct: 269  KYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIYAQLASQLRESDGTFDG 328

Query: 246  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNE-KAPTL 305
            +  SV KDDI +FL+L HVQKL+IPFI MYRKE+  SLL     +  D  G N+ K P  
Sbjct: 329  RGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL-----DTGDFDGANQGKKPET 388

Query: 306  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 365
            KWHK+ W I +LDKKWLLL+KRK AL  YY+KR+EEESRR+YDETRL+LN  LFESV+KS
Sbjct: 389  KWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKS 448

Query: 366  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 425
            LK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS YSICSKAGLWEVA KFGYS
Sbjct: 449  LKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYS 508

Query: 426  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 485
            +EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   AVLKGARHMAA+EISCEP 
Sbjct: 509  AEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPS 568

Query: 486  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 545
            V+K+VR  +M+ AV+STSPT DGN  IDSFHQFS +KWLREKPLS+FE AQWLLIQK EE
Sbjct: 569  VKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEE 628

Query: 546  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 605
            EKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQRKLIL+DAL  FLLPSMEK
Sbjct: 629  EKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEK 688

Query: 606  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 665
            EARSL+ SRAK+ LL EYG++LWNK+S GPYQ KE DI+ DEEAAPRVMACCWGPGKP  
Sbjct: 689  EARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPN 748

Query: 666  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 725
            TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLKFM DHQPHVV LGAVNLS
Sbjct: 749  TFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLS 808

Query: 726  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 785
            CTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRLYENSRIS +QL  QSG+ 
Sbjct: 809  CTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGN- 868

Query: 786  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 845
            V+RAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+  DEKYGMVEQVMVD+TNQV
Sbjct: 869  VRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQV 928

Query: 846  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 905
            G+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF RKD +  HGLGKKVFVN
Sbjct: 929  GIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLGKKVFVN 988

Query: 906  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA-E 965
            A GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAKD++DEDV+GD+NDDEDA E
Sbjct: 989  AAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIE 1048

Query: 966  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1025
            MAIEHVRDRP  LR + +DEY ASKKRE+K+ET+ +I REL  GFQDWR  ++EPS DEE
Sbjct: 1049 MAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEE 1108

Query: 1026 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1085
            FYMISGETEDT+AEGRIVQA+VR++Q  RAIC L+SGLTGMLMKEDF+DD R+I DL+D+
Sbjct: 1109 FYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQ 1168

Query: 1086 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1145
            L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NR+Q  +++D YYHEDR+SLQ  +EK+R
Sbjct: 1169 LKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKAR 1228

Query: 1146 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1205
            KEKEL +KHFK RMIVHPRF+NITAD+A E+LSDKD GESIVRPSSRG +FLTLTLKIYD
Sbjct: 1229 KEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYD 1288

Query: 1206 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1265
            GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMDRYVDPLVSHLK ML+YR
Sbjct: 1289 GVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYR 1348

Query: 1266 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1325
            KFR+GTK+EVD+L+RIEK E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKG
Sbjct: 1349 KFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKG 1408

Query: 1326 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1385
            FKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMRSPA  GS   S GS WG
Sbjct: 1409 FKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGS---SGGSGWG 1468

Query: 1386 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNN 1445
             S  +GGW+  S   DRS   GS  G  + RN GGRDGHPSG PRPYGGRGRGRG     
Sbjct: 1469 SSQSEGGWKGNS---DRS---GSGRG-GEYRNGGGRDGHPSGAPRPYGGRGRGRG---RG 1528

Query: 1446 RGNNVNNERQDSSYD-----------------GSRWDSTSKDGDDGLSNFPGAKIQNSPG 1505
            R +++N++RQD + D                 G  W S S     G  +  G   ++   
Sbjct: 1529 RRDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGGWGSESAGKKTGGGSTGGWGSESGGN 1588

Query: 1506 KEAFPGGWGSGGSGGGGNGW-SDSGG-----DGGGGGGWGGSGGNSKGNWGGSGASNSGG 1540
            K    G WGSG  GGG  GW +DSGG     DGG G G GG G +     GG  +S  GG
Sbjct: 1589 KSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSDWGNESGGKKSSADGG 1618

[Close]

BLAST of MS021963 vs. ExPASy Swiss-Prot
Match: Q9CAM1 (Transcription elongation factor SPT6-like OS=Arabidopsis thaliana OX=3702 GN=At1g63210 PE=1 SV=2)

HSP 1 Score: 1592.8 bits (4123), Expect = 0.0e+00
Identity = 843/1345 (62.68%), Postives = 1033/1345 (76.80%), Query Frame = 0


Query: 2    EEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRT 61
            E + L EDDY LL+DNN T QR     K+KRLKK+          S++ED + +      
Sbjct: 65   ESFTLHEDDYLLLKDNNDTFQR----NKYKRLKKS----------SEEEDKINN------ 124

Query: 62   AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 121
                       DD                       D+D+++ FIVDE+ D     +RRK
Sbjct: 125  -----------DD-----------------------DDDDLSHFIVDED-DHGAQGMRRK 184

Query: 122  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 181
            K+K K+     G  S AL+ A+++FGD +ELL+LRK++L  +E  E++LEDEFEP+V+SE
Sbjct: 185  KMKYKQ-----GTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPMVLSE 244

Query: 182  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 241
            KYMTEKDD+IR++D+PERMQI EE+ G   +D++S+++E++WI+  L            G
Sbjct: 245  KYMTEKDDEIRKLDVPERMQIFEEAIGIVSLDDMSIQEESNWIYARLLQ--------EQG 304

Query: 242  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLK 301
            Q   + KDDI++FL++ HVQKL+IPFI MYRKE+  SLL  +  +        +K    K
Sbjct: 305  QGCLINKDDIVKFLEMFHVQKLEIPFIAMYRKEQCRSLLDSSDDDHDGSDFNLDKKLETK 364

Query: 302  WHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKSL 361
            WHK+LW IQ+LD+KW+LL+KRK AL  YY+KRFEEE+          LN  LFESV+KSL
Sbjct: 365  WHKVLWMIQDLDRKWVLLRKRKTALFGYYTKRFEEET------CMSDLNKSLFESVIKSL 424

Query: 362  KAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 421
            +AAE+EREVDDVDSKFNLHFP  E  +DEGQ+KRP RKS YSICSK G+ E A KFGYS+
Sbjct: 425  QAAETEREVDDVDSKFNLHFPHCE--IDEGQYKRPNRKSQYSICSKFGIKEFANKFGYSA 484

Query: 422  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCV 481
            EQ GL LSLEK+  DELED K+TPEEMA N+ CAMF   QAVLKGARHMAA+EISCEP +
Sbjct: 485  EQLGLALSLEKVFVDELEDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPSI 544

Query: 482  RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 541
            RK+VR  FM+ AV+STSPTPDGNV IDSFH+FS VKWL EKPL +F+  QWLLIQKAEEE
Sbjct: 545  RKYVRGIFMENAVVSTSPTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEEE 604

Query: 542  KLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 601
            KLL VT KLPE  +N++I++ +E+YLS GVSK AQLWNEQRKLIL+DA+ GF+LPSMEKE
Sbjct: 605  KLLQVTFKLPENQMNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEKE 664

Query: 602  ARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 661
            ARSL+ SRAK  LL EYG+ LWNK+S GPY+   N  +S+EEAAPRV+ACCWGPG P TT
Sbjct: 665  ARSLLTSRAKTQLLSEYGQVLWNKVSSGPYRRNNN--TSEEEAAPRVLACCWGPGNPETT 724

Query: 662  FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 721
            FVMLDSSGE++DVLY+GS+ LRS++VNDQ+RKK DQ+R LKF+ DHQP V+ L AVNLSC
Sbjct: 725  FVMLDSSGELVDVLYSGSIGLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLSC 784

Query: 722  TRLKDDIYEIIFKMVEENPRD-VGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 781
             RLKD+IYE IF+MVEE P + V   +    +VY DESLPRLYENSRISS+QL  Q+G I
Sbjct: 785  VRLKDEIYEAIFQMVEELPLNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAG-I 844

Query: 782  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 841
            VKRAV+LGRYLQNPLAM++TLCGPG++ILSWKL+  ++F+ PDEKY MVEQVMVD+TNQV
Sbjct: 845  VKRAVSLGRYLQNPLAMISTLCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQV 904

Query: 842  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 901
            G+D NLA SHEWLFSPLQF++GLGPRKAASLQ+SLVRAGSIF RK+ +  HG+GKKVFVN
Sbjct: 905  GIDINLAASHEWLFSPLQFVSGLGPRKAASLQKSLVRAGSIFVRKELIN-HGIGKKVFVN 964

Query: 902  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED-VKGDANDDEDAE 961
            A GFLR+RRSGLA SSSQFIDLLDDTRIHPESY LAQELAKDV+  D V+GD  +D+  E
Sbjct: 965  AAGFLRIRRSGLACSSSQFIDLLDDTRIHPESYGLAQELAKDVYAHDTVRGD--EDDAIE 1024

Query: 962  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1021
            MAIEHVRD P  LR + +DEY  SK +E+K+ET+  I REL  GFQDWR  ++E   DEE
Sbjct: 1025 MAIEHVRDEPASLRKIVLDEYLRSKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEE 1084

Query: 1022 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1081
            FYMISGET++T+ EGRIVQATV+KV   +A C L+ GL G+L+KED++DD R+I DLS++
Sbjct: 1085 FYMISGETKETIGEGRIVQATVKKVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNK 1144

Query: 1082 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHED-RSSLQSEQEKS 1141
            L EGDIVTCK+KSI K RY V LVCKESEMR +RN    D+D YYHE+ R+S+  E+EK 
Sbjct: 1145 LCEGDIVTCKVKSILKQRYHVLLVCKESEMRKHRN--LGDVDDYYHEEKRNSVLIEKEKV 1204

Query: 1142 RKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIY 1201
             KE    KK FK RMIVHPRF+NITA++A  +LSDK+ GESIVRPSSRG + LTL +KI 
Sbjct: 1205 PKE----KKQFKSRMIVHPRFQNITAEQATVYLSDKNIGESIVRPSSRGLNHLTLMIKIS 1264

Query: 1202 DGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSY 1261
            D VYA+K+I+EG KE+KDI SL RIGKTLKIG +TFEDLDEVMDRYVDPLV+HL  ML++
Sbjct: 1265 DNVYANKEIIEGEKENKDIVSLQRIGKTLKIGNETFEDLDEVMDRYVDPLVTHLMTMLNH 1321

Query: 1262 RKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK 1321
            RKFR GTK+E+D+L+R+EK   P  +VY FG+SHEHPG+FIL+YIRS NPHHEYIGLYPK
Sbjct: 1325 RKFRTGTKSEIDDLLRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIGLYPK 1321

Query: 1322 GFKFRKRMFEDIDRLVAYFQRHIDD 1344
            GFKFRKRMF D+D+L AYF+RHID+
Sbjct: 1385 GFKFRKRMFGDLDKLAAYFKRHIDN 1321

[Close]

BLAST of MS021963 vs. ExPASy Swiss-Prot
Match: Q8UVK2 (Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.5e-151
Identity = 434/1521 (28.53%), Postives = 726/1521 (47.73%), Query Frame = 0


Query: 6    LDEDDYELLEDN-NITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRTAEE 65
            LD+DD +L+E+N  + ++R K  KK+ R+K      ++  G  DDE            ++
Sbjct: 95   LDDDDLDLIEENLGVKVKRRK--KKYSRVK-----TMDDEGDDDDE------------KD 154

Query: 66   KLKRSLF---GDDEAPLED-IAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 125
             +   +F   GD E  +ED  A +   P ++E+ +  +E ++ DFI    VD+DG P+  
Sbjct: 155  LIADEIFTGDGDGEGEVEDGEAVDTLHPRDDEEEEDDEESDIDDFI----VDDDGQPI-- 214

Query: 126  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDE------- 185
                KKK ++  G +  ALQEA EIFG   +  +      D  E  E+  +DE       
Sbjct: 215  ---TKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESWDRPKK 274

Query: 186  --------------FEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLED 245
                          +EP  +   +MT++D++IR  D+PER Q+      P   DE  LE+
Sbjct: 275  QTKRRVSRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDE--LEE 334

Query: 246  ETSWIH---------------GHLANGTNSLFGTASGQDLSVVKDDILRFLDLVHVQKLD 305
            E  WI+                +L  GT + F       ++ +K+     L+ +  Q  +
Sbjct: 335  EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKE----ALNFMRNQHFE 394

Query: 306  IPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKRKN 365
            +PFI  YRKE +   L       ++D               LW + + D+KW  L+ RK 
Sbjct: 395  VPFIAFYRKEYVEPELN------IND---------------LWKVWQWDEKWTQLKTRKQ 454

Query: 366  AL----QSYYSKRFEEES----RRIYDETRLSLNNQLFESVMKSLKAAESEREVDDVDSK 425
             L    Q   S +FE+ S    + + D TR      L  + M+ LK  +S  E+ DV + 
Sbjct: 455  NLTRLFQRMQSYQFEQISADPDKPLADSTR-----PLDTADMERLKDVQSIDELGDVYNH 514

Query: 426  FNLHFPPG-------------------EVGVDEGQ-----------------FKRPKRKS 485
            F L++                      EV  ++G+                  K+  R+ 
Sbjct: 515  FLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEEEQKGPDLKQASRRD 574

Query: 486  LYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETP 545
            +YSIC  AGL  +A KFG + EQFG  L     R++  + P E P E+A ++ C+ F TP
Sbjct: 575  MYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFNTP 634

Query: 546  QAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLR 605
            +AVL+GAR+M A++I+ EP VR  +R  F + A I+  PT  G   +D  H     K+L+
Sbjct: 635  EAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDVDEAHFAYSFKYLK 694

Query: 606  EKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHL-----NKLITDFNEYYLSDGVSKSA 665
             KP+      Q+L +  AEEE LL + + +    +          +  ++Y  D  S   
Sbjct: 695  NKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEIKQFYYRDEFSHQV 754

Query: 666  QLWNEQRKLILQDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPY---- 725
            Q WN+QR L ++ +L  FL P M KE ++ + + AK+ ++    K L+N + V PY    
Sbjct: 755  QEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKLYNWLKVAPYRPDQ 814

Query: 726  QHKENDISSDEEAAP--RVMACCWGPGKPATTFV-MLDSSGEVLDVLYTGSLTLR--SQN 785
            Q +E+D   DE      RV+   +  G+    F  +++  GEV+D L       R  +  
Sbjct: 815  QVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWR 874

Query: 786  VNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHE 845
             +++++K+ D E + KF+   +PHVV +   N     + +DI   I ++ + +   V   
Sbjct: 875  EDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTISELEQNSSLPV--- 934

Query: 846  MDGLSIVYGDESLPRLYENSRISSDQLQGQSGSIVKRAVALGRYLQNPLAMVATLCGPGK 905
              G+ +V  D  L  LY NS+ S    +     ++++AV++ R +Q+PL   A +C    
Sbjct: 935  -VGVELV--DNELAVLYMNSKKSEADFRDYP-PLLRQAVSVARKIQDPLVEFAQVCSTDD 994

Query: 906  EILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPR 965
            +IL  KL+PL+  +  +E    +    ++  N+VG+D N AI+H +  S +Q+I GLGPR
Sbjct: 995  DILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGPR 1054

Query: 966  KAASLQRSLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD 1025
            K + L + L +  + +  R   VT   +G KVF+N  GF+++  + L  S+  +I++LD 
Sbjct: 1055 KGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDG 1114

Query: 1026 TRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKK 1085
            +R+HPE+Y  A+++A D  + D   ++ +D +   A+E + + P  L+ LD+D +A   +
Sbjct: 1115 SRVHPETYEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELE 1174

Query: 1086 RE---DKRETFLDIKRELMHGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATV- 1145
            R+   +K  T  DI+ EL   ++D R  Y  P+ +E F M++ ET +T   G+++   V 
Sbjct: 1175 RQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFYIGKLITCVVT 1234

Query: 1146 ----RKVQGQ---RAICGLESGL--TGMLMKEDFAD------------------------ 1205
                R+ QG+   +AI   E+GL       +++F +                        
Sbjct: 1235 NIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRL 1294

Query: 1206 -------------DSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQ 1265
                           + +    +R+  G  V C+I  I   ++ V L C+ S++    N+
Sbjct: 1295 DNAVMGFIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCRTSDLSDKNNE 1354

Query: 1266 ITRDLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKD 1325
                 D YY  D  +   +QE+ +K+K+    + K R+I HP F NI   +A + +   D
Sbjct: 1355 WKLPKDTYYDFDAETDDVKQEEEQKKKQQRTTYIK-RVIAHPSFHNINFKQAEKMMESMD 1414

Query: 1326 PGESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFE 1374
             G+ ++RPSS+G + LT+T K+ DG+Y H D+ E GKE     +   +G TL I  + FE
Sbjct: 1415 QGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKE-----NAFSLGHTLWINTEEFE 1474

[Close]

BLAST of MS021963 vs. ExPASy Swiss-Prot
Match: Q7KZ85 (Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2)

HSP 1 Score: 534.6 bits (1376), Expect = 3.6e-150
Identity = 454/1585 (28.64%), Postives = 752/1585 (47.44%), Query Frame = 0


Query: 6    LDEDDYELLEDN-NITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRTAE- 65
            L++DD++L+E+N  + ++R    +K++R+KK           SDDED  E   G    E 
Sbjct: 96   LEDDDFDLIEENLGVKVKR---GQKYRRVKK----------MSDDEDDDEEEYGKEEHEK 155

Query: 66   EKLKRSLF--GDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 125
            E +   +F  G+ E   E +      PEEEE+ D  +E ++ DFI    VD+DG P+++ 
Sbjct: 156  EAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDD--EESDIDDFI----VDDDGQPLKKP 215

Query: 126  KLKKKKSRQAPGVSSTALQEAHEIFG---DVDELLQLRK--REL-DSHEWHEKRLEDE-- 185
            K +KK     PG +  ALQEA EIFG   D DE  +  +   EL + +E+ +   E E  
Sbjct: 216  KWRKK----LPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIR 275

Query: 186  -------------------FEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDE 245
                               +EP  +   ++T++D++IR  D+PER Q+          DE
Sbjct: 276  VRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLRSIPVKGAEDDE 335

Query: 246  ISLEDETSWIHGH-LANGTNSLFGTAS----GQDLSVVK-------DDILRFLDLVHVQK 305
              LE+E  WI+ +  A  T SL  +      GQ  S            I   L  +  Q 
Sbjct: 336  --LEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQH 395

Query: 306  LDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKR 365
             ++PFI  YRKE +   L       ++D               LW + + D+KW  L+ R
Sbjct: 396  FEVPFIAFYRKEYVEPELH------IND---------------LWRVWQWDEKWTQLRIR 455

Query: 366  KNALQSYYSKRFEEESRRIYDETRLSLNNQLFESV-------MKSLKAAESEREVDDVDS 425
            K  L    ++ FE+     Y++     +  L + +       M+ LK  +S  E+ DV +
Sbjct: 456  KENL----TRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYN 515

Query: 426  KFNLHFPPG-------------------EVGVDEG-------------QFKRPKRKSLYS 485
             F L++                      E G +EG             + K+  R+ +Y+
Sbjct: 516  HFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYT 575

Query: 486  ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAV 545
            IC  AGL  +A KFG + EQFG  L     R++  + P E P E+A ++ C+ F TP+AV
Sbjct: 576  ICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFPTPEAV 635

Query: 546  LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 605
            L+GAR+M A++I+ EP VR+ +R  F + A ++ +PT  G   +D  H     K+L+ KP
Sbjct: 636  LEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKP 695

Query: 606  LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHL------NKLITDFNEYYLSDGVSKSAQL 665
            +    D Q+L I  AE+E LL   + +  K +           +  ++Y  D  S   Q 
Sbjct: 696  VKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQE 755

Query: 666  WNEQRKLILQDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPY----QH 725
            WN QR + ++ AL  FL   M KE ++ + + AK +++    + L+N + V PY    Q 
Sbjct: 756  WNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQV 815

Query: 726  KENDISSDEEAAP--RVMACCWGPGKPATTF-VMLDSSGEVLDVLYTGSLTLRSQNVNDQ 785
            +E+D   DE      RV+   +   +    F  +++  GEV D L     T R     ++
Sbjct: 816  EEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREE 875

Query: 786  QRKK--NDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMD 845
            +R+K   D E + KF+ + +PHVV +   N     L +D+  I+ ++      D G ++ 
Sbjct: 876  EREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIVHEL------DQGQQLS 935

Query: 846  GLSIVYGDESLPRLYENSRISSDQLQGQSGSIVKRAVALGRYLQNPLAMVATLCGPGKEI 905
             + +   D  L  LY NS+ S  + +     ++++AV+L R +Q+PL   A +C   ++I
Sbjct: 936  SIGVELVDNELAILYMNSKKSEAEFRDYP-PVLRQAVSLARRIQDPLIEFAQVCSSDEDI 995

Query: 906  LSWKLNPLENFMTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKA 965
            L  K +PL+  +  +E    +    ++  N+VG+D N AI+H +  + +Q++ GLGPRK 
Sbjct: 996  LCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKG 1055

Query: 966  ASLQRSLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTR 1025
              L + L +  + + +R   VT   +G KVF+N  GFL++  + L  S+  +I++LD +R
Sbjct: 1056 THLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSR 1115

Query: 1026 IHPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKKRE 1085
            +HPE+Y  A+++A D  + D   ++ +D +   A+E + + P  L+ LD+D +A   +R+
Sbjct: 1116 VHPETYEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELERQ 1175

Query: 1086 ---DKRETFLDIKRELMHGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATV--- 1145
               DK  T  DI+ EL   ++D R  Y  P+ +E F M++ ET +T   G+++   V   
Sbjct: 1176 GYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGI 1235

Query: 1146 --RKVQGQ-----------------------------------------RAI---CGLES 1205
              R+ QG+                                         +AI     L++
Sbjct: 1236 AHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDN 1295

Query: 1206 GLTGMLMKEDFADDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQ 1265
            G+TG +  +  +D  + +    +R+  G  V C+I  I   ++   L C+ S++    N+
Sbjct: 1296 GVTGFIPTKFLSD--KVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNE 1355

Query: 1266 ITRDLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKD 1325
                 D YY  D  +   +QE+  K K+    + K R+I HP F NI   +A + +   D
Sbjct: 1356 WKLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMD 1415

Query: 1326 PGESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFE 1385
             G+ I+RPSS+G + LT+T K+ DG+Y H D+ E GKE     +   +G TL I  + FE
Sbjct: 1416 QGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKE-----NAFSLGATLWINSEEFE 1475

Query: 1386 DLDEVMDRYVDPLVSHLKAMLSYRKFR---RGTKAEVDELMRIEKSEYPMRIVYGFGISH 1438
            DLDE++ RYV P+ S  + +L+++ ++    G + +++EL+   K E P  I Y      
Sbjct: 1476 DLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACK 1535

[Close]

BLAST of MS021963 vs. ExPASy Swiss-Prot
Match: Q62383 (Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2)

HSP 1 Score: 529.3 bits (1362), Expect = 1.5e-148
Identity = 448/1584 (28.28%), Postives = 748/1584 (47.22%), Query Frame = 0


Query: 6    LDEDDYELLEDN-NITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRTAEE 65
            L++DD++L+E+N  + ++R    +K++R+KK            DDED  E        +E
Sbjct: 96   LEDDDFDLIEENLGVKVKR---GQKYRRVKKMS---------DDDEDDEEEYGKEEHEKE 155

Query: 66   KLKRSLFGDDEAP--LEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRKK 125
             +   +F D+E     E +      P+EEE+ D  +E ++ DFI    VD+DG P+++ K
Sbjct: 156  AIAGEIFQDEEGEEGQEAVEAPMAPPDEEEEDD--EESDIDDFI----VDDDGQPLKKPK 215

Query: 126  LKKKKSRQAPGVSSTALQEAHEIFG---DVDELLQLRK--REL-DSHEWHEKRLEDE--- 185
             +KK     PG +  ALQEA EIFG   D DE  +  +   EL + +E+ +   E E   
Sbjct: 216  WRKK----LPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDYEYEDDETEGEIRV 275

Query: 186  ------------------FEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDEI 245
                              +EP  +   ++T++D++IR  D+PER Q+          DE 
Sbjct: 276  RPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLRSIPVKAAEDDE- 335

Query: 246  SLEDETSWIHGH-LANGTNSLFGTAS----GQDLSVVK-------DDILRFLDLVHVQKL 305
             LE+E  WI+ +  A  T SL  +      GQ  S            I   L  +  Q  
Sbjct: 336  -LEEEADWIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHF 395

Query: 306  DIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKRK 365
            ++PFI  YRKE +   L       ++D               LW + + D+KW  L+ RK
Sbjct: 396  EVPFIAFYRKEYVEPELH------IND---------------LWRVWQWDEKWTQLRIRK 455

Query: 366  NALQSYYSKRFEEESRRIYDETRLSLNNQLFESV-------MKSLKAAESEREVDDVDSK 425
              L    ++ FE+     Y++     +  L + +       M+ LK  +S  E+ DV + 
Sbjct: 456  ENL----TRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNH 515

Query: 426  FNLHF----------------------------PPGEVGVDEGQ----FKRPKRKSLYSI 485
            F L++                              GE   DE Q     K+  R+ +Y+I
Sbjct: 516  FLLYYGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTI 575

Query: 486  CSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVL 545
            C  AGL  +A KFG + EQFG  L     R++  + P E P E+A ++ C+ F TP+AVL
Sbjct: 576  CQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFPTPEAVL 635

Query: 546  KGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPL 605
            +GAR+M A++I+ EP VR+ +R  F + A ++ +PT  G   +D  H     K+L+ KP+
Sbjct: 636  EGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPV 695

Query: 606  SRFEDAQWLLIQKAEEEKLLNVTLKLPEKHL------NKLITDFNEYYLSDGVSKSAQLW 665
                D Q+L I  AE+E LL + + +  K +           +  ++Y  D  S   Q W
Sbjct: 696  KELRDDQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEW 755

Query: 666  NEQRKLILQDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPY----QHK 725
            N QR + ++ AL  FL   M KE ++ + + A+  ++    + L+N + V PY    Q +
Sbjct: 756  NRQRTMAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVE 815

Query: 726  ENDISSDEEAAP--RVMACCWGPGKPATTF-VMLDSSGEVLDVLYTGSLTLRSQNVNDQQ 785
            E+D   DE      RV+   +   +    F  +++  GEV D L     T R     +++
Sbjct: 816  EDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEE 875

Query: 786  RKK--NDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDG 845
            R+K   D E + KF+ + +PHVV +   N     L +D+  I+ ++      D G ++  
Sbjct: 876  REKKAQDIETLKKFLVNKKPHVVTIAGENRDAQMLTEDVKRIVHEL------DQGQQLSS 935

Query: 846  LSIVYGDESLPRLYENSRISSDQLQGQSGSIVKRAVALGRYLQNPLAMVATLCGPGKEIL 905
            + +   D  L  LY NS+ S  + +     ++++AV+L R +Q+PL   A +C   ++IL
Sbjct: 936  IGVELVDNELAILYMNSKKSEAEFRDYP-PVLRQAVSLARRIQDPLIEFAQVCSSDEDIL 995

Query: 906  SWKLNPLENFMTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAA 965
              K +PL+  +  +E    +    ++  N+VG+D N AI+H +  + +Q++ GLGPRK  
Sbjct: 996  CLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGT 1055

Query: 966  SLQRSLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRI 1025
             L + L +  + + +R   VT   +G KVF+N  GFL++  + L  S+  +I++LD +R+
Sbjct: 1056 HLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRV 1115

Query: 1026 HPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKKRE- 1085
            HPE+Y  A+++A D  + D   ++ +D +   A+E + + P  L+ LD+D +A   +R+ 
Sbjct: 1116 HPETYEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELERQG 1175

Query: 1086 --DKRETFLDIKRELMHGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATV---- 1145
              DK  T  DI+ EL   ++D R  Y  P+ +E F M++ ET +T   G+++   V    
Sbjct: 1176 YGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIA 1235

Query: 1146 -RKVQGQ-----------------------------------------RAI---CGLESG 1205
             R+ QG+                                         +AI     L++G
Sbjct: 1236 HRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNG 1295

Query: 1206 LTGMLMKEDFADDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQI 1265
            +TG +  +  +D  + +    +R+  G  V C+I  I   ++   L C+ S++    N+ 
Sbjct: 1296 VTGFIPTKFLSD--KVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEW 1355

Query: 1266 TRDLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDP 1325
                D YY  D  +   +QE+  K K+    + K R+I HP F NI   +A + +   D 
Sbjct: 1356 KLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQ 1415

Query: 1326 GESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFED 1385
            G+ I+RPSS+G + LT+T K+  G+Y H D+ E GKE     +   +G TL I  + FED
Sbjct: 1416 GDVIIRPSSKGENHLTVTWKVSAGIYQHVDVREEGKE-----NAFSLGATLWINSEEFED 1475

Query: 1386 LDEVMDRYVDPLVSHLKAMLSYRKFR---RGTKAEVDELMRIEKSEYPMRIVYGFGISHE 1438
            LDE++ RYV P+ S  + +L+++ ++    G + +++EL+   K E P  I Y      E
Sbjct: 1476 LDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKE 1535

[Close]

BLAST of MS021963 vs. ExPASy TrEMBL
Match: A0A6J1D721 (Transcription elongation factor spt6 OS=Momordica charantia OX=3673 GN=LOC111018212 PE=3 SV=1)

HSP 1 Score: 2977.6 bits (7718), Expect = 0.0e+00
Identity = 1536/1541 (99.68%), Postives = 1538/1541 (99.81%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR
Sbjct: 83   KEEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 142

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR
Sbjct: 143  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 202

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS
Sbjct: 203  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 262

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS 240
            EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS
Sbjct: 263  EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS 322

Query: 241  GQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL 300
            GQDLSVVKDDILRFLDLVH+QKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL
Sbjct: 323  GQDLSVVKDDILRFLDLVHIQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL 382

Query: 301  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 360
            KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS
Sbjct: 383  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 442

Query: 361  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 420
            LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS
Sbjct: 443  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 502

Query: 421  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 480
            SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC
Sbjct: 503  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 562

Query: 481  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 540
            VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE
Sbjct: 563  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 622

Query: 541  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 600
            EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK
Sbjct: 623  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 682

Query: 601  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 660
            EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT
Sbjct: 683  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 742

Query: 661  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 720
            TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS
Sbjct: 743  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 802

Query: 721  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 780
            CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG I
Sbjct: 803  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG-I 862

Query: 781  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 840
            VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV
Sbjct: 863  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 922

Query: 841  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 900
            GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN
Sbjct: 923  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 982

Query: 901  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 960
            AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM
Sbjct: 983  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 1042

Query: 961  AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF 1020
            AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF
Sbjct: 1043 AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF 1102

Query: 1021 YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL 1080
            YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL
Sbjct: 1103 YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL 1162

Query: 1081 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK 1140
            HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK
Sbjct: 1163 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK 1222

Query: 1141 EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1200
            EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG
Sbjct: 1223 EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1282

Query: 1201 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK 1260
            VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK
Sbjct: 1283 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK 1342

Query: 1261 FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1320
            FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF
Sbjct: 1343 FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1402

Query: 1321 KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1380
            KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG
Sbjct: 1403 KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1462

Query: 1381 SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1440
            SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR
Sbjct: 1463 SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1522

Query: 1441 GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGN 1500
            GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGN
Sbjct: 1523 GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGGN 1582

Query: 1501 GWSDSGGD--GGGGGGWGGSGGNSKGNWGGSGASNSGGWGS 1540
            GWSDSGGD  GGGGGGWGGSGGNSKGNWGGSGASNSGGWGS
Sbjct: 1583 GWSDSGGDGGGGGGGGWGGSGGNSKGNWGGSGASNSGGWGS 1622

[Close]

BLAST of MS021963 vs. ExPASy TrEMBL
Match: A0A1S3B3S8 (Transcription elongation factor spt6 OS=Cucumis melo OX=3656 GN=LOC103485847 PE=3 SV=1)

HSP 1 Score: 2805.4 bits (7271), Expect = 0.0e+00
Identity = 1449/1545 (93.79%), Postives = 1492/1545 (96.57%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDN+EPSGFSDDEDFVESSRGGR
Sbjct: 75   KEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGR 134

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEE DEDGAP+RR
Sbjct: 135  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEEDEDGAPIRR 194

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+ EW EKRLEDEFEPIVIS
Sbjct: 195  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQEWREKRLEDEFEPIVIS 254

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTAS 240
            EKYMTEKDDQIREIDIPERMQISEESTG PP D+ SL+DE SWIHGH+ANG NSLF  AS
Sbjct: 255  EKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASWIHGHIANGMNSLFSNAS 314

Query: 241  GQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTL 300
            GQDLSV KDDILR+LDLVHVQKLDIPFI MYRKEEILSLLKD +HEA DDQ KN+KAPTL
Sbjct: 315  GQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDIEHEAGDDQDKNDKAPTL 374

Query: 301  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 360
            +WHK+LWAIQ+LDKKWLLLQKRK ALQSYY  R+ EE R     TR +LN QLF+SV +S
Sbjct: 375  RWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRS 434

Query: 361  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 420
            L+AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS
Sbjct: 435  LEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 494

Query: 421  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 480
            SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAVLKGARHMAAIEISCEPC
Sbjct: 495  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPC 554

Query: 481  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 540
            VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE
Sbjct: 555  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 614

Query: 541  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 600
            EKLLNVTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK
Sbjct: 615  EKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 674

Query: 601  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 660
            EARSLM S+AK WLLMEYGK+LW+K+S+GPYQHKENDISSDEEAAPRVMACCWGPGKPAT
Sbjct: 675  EARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 734

Query: 661  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 720
            TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS
Sbjct: 735  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 794

Query: 721  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 780
            CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG I
Sbjct: 795  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG-I 854

Query: 781  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 840
            VKRAVALGRYLQNPLAMVATLCGPG+EILSWKLNPLENF+TPDEKYGMVEQVMVDVTNQV
Sbjct: 855  VKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQV 914

Query: 841  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 900
            GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN
Sbjct: 915  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 974

Query: 901  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 960
            AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM
Sbjct: 975  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEM 1034

Query: 961  AIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEF 1020
            AIEHVRDRPHLLRTLDVDEYA SKKREDK ETFLDIKRELM GFQDWRKQYEEPSQDEEF
Sbjct: 1035 AIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEF 1094

Query: 1021 YMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRL 1080
            YMISGETEDTLAEGRIVQATVRKV GQ+AICGLESGLTGMLMKED+ADDSREISDLSDRL
Sbjct: 1095 YMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYADDSREISDLSDRL 1154

Query: 1081 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRK 1140
             EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+QIT++LDPYYHEDRSSLQSEQEKSRK
Sbjct: 1155 REGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRK 1214

Query: 1141 EKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1200
            EKELAKKHFKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIYDG
Sbjct: 1215 EKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDG 1274

Query: 1201 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRK 1260
            VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLKAMLSYRK
Sbjct: 1275 VYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRK 1334

Query: 1261 FRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1320
            FRRGTKAEVDELMRIEKSEYPMRI+YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF
Sbjct: 1335 FRRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF 1394

Query: 1321 KFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1380
            KFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG
Sbjct: 1395 KFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGG 1454

Query: 1381 SSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1440
            SSH+GGWRSQS DRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR
Sbjct: 1455 SSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNR 1514

Query: 1441 GNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGW---GSGGSGG 1500
            G   NN+R DS YDGSRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW   GSGG GG
Sbjct: 1515 G---NNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGG 1574

Query: 1501 GGNGWSDS-GGDGG--GGGGWGGSGGNSKGNWGGSGASNSGGWGS 1540
            GGNGW+DS GG GG  GGGGWGG+GGNSKGNWGGSG SNSGGWGS
Sbjct: 1575 GGNGWNDSTGGSGGGSGGGGWGGTGGNSKGNWGGSGGSNSGGWGS 1615

[Close]

BLAST of MS021963 vs. ExPASy TrEMBL
Match: A0A5D3DZK9 (Transcription elongation factor spt6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2406G00200 PE=3 SV=1)

HSP 1 Score: 2804.6 bits (7269), Expect = 0.0e+00
Identity = 1449/1544 (93.85%), Postives = 1491/1544 (96.57%), Query Frame = 0


Query: 2    EEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGRT 61
            EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDN+EPSGFSDDEDFVESSRGGRT
Sbjct: 61   EEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGRT 120

Query: 62   AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 121
            AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEE DEDGAP+RRK
Sbjct: 121  AEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEEDEDGAPIRRK 180

Query: 122  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 181
            KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+ EW EKRLEDEFEPIVISE
Sbjct: 181  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQEWREKRLEDEFEPIVISE 240

Query: 182  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 241
            KYMTEKDDQIREIDIPERMQISEESTG PP D+ SL+DE SWIHGH+ANG NSLF  ASG
Sbjct: 241  KYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASWIHGHIANGMNSLFSNASG 300

Query: 242  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPTLK 301
            QDLSV KDDILR+LDLVHVQKLDIPFI MYRKEEILSLLKD +HEA DDQ KN+KAPTL+
Sbjct: 301  QDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDIEHEAGDDQDKNDKAPTLR 360

Query: 302  WHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKSL 361
            WHK+LWAIQ+LDKKWLLLQKRK ALQSYY  R+ EE R     TR +LN QLF+SV +SL
Sbjct: 361  WHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRSL 420

Query: 362  KAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 421
            +AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS
Sbjct: 421  EAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 480

Query: 422  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCV 481
            EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAVLKGARHMAAIEISCEPCV
Sbjct: 481  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPCV 540

Query: 482  RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 541
            RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE
Sbjct: 541  RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 600

Query: 542  KLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 601
            KLLNVTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE
Sbjct: 601  KLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 660

Query: 602  ARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 661
            ARSLM S+AK WLLMEYGK+LW+K+S+GPYQHKENDISSDEEAAPRVMACCWGPGKPATT
Sbjct: 661  ARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 720

Query: 662  FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 721
            FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC
Sbjct: 721  FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 780

Query: 722  TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSIV 781
            TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG IV
Sbjct: 781  TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG-IV 840

Query: 782  KRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQVG 841
            KRAVALGRYLQNPLAMVATLCGPG+EILSWKLNPLENF+TPDEKYGMVEQVMVDVTNQVG
Sbjct: 841  KRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQVG 900

Query: 842  LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA 901
            LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA
Sbjct: 901  LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA 960

Query: 902  VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMA 961
            VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMA
Sbjct: 961  VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMA 1020

Query: 962  IEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEEFY 1021
            IEHVRDRPHLLRTLDVDEYA SKKREDK ETFLDIKRELM GFQDWRKQYEEPSQDEEFY
Sbjct: 1021 IEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFY 1080

Query: 1022 MISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDRLH 1081
            MISGETEDTLAEGRIVQATVRKV GQ+AICGLESGLTGMLMKED+ADDSREISDLSDRL 
Sbjct: 1081 MISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYADDSREISDLSDRLR 1140

Query: 1082 EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSRKE 1141
            EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+QIT++LDPYYHEDRSSLQSEQEKSRKE
Sbjct: 1141 EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRKE 1200

Query: 1142 KELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYDGV 1201
            KELAKKHFKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIYDGV
Sbjct: 1201 KELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDGV 1260

Query: 1202 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYRKF 1261
            YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLKAMLSYRKF
Sbjct: 1261 YAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKF 1320

Query: 1262 RRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1321
            RRGTKAEVDELMRIEKSEYPMRI+YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK
Sbjct: 1321 RRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFK 1380

Query: 1322 FRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS 1381
            FRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS
Sbjct: 1381 FRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGS 1440

Query: 1382 SHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRG 1441
            SH+GGWRSQS DRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRG
Sbjct: 1441 SHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRG 1500

Query: 1442 NNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGW---GSGGSGGG 1501
               NN+R DS YDGSRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW   GSGG GGG
Sbjct: 1501 ---NNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGGG 1560

Query: 1502 GNGWSDS-GGDGG--GGGGWGGSGGNSKGNWGGSGASNSGGWGS 1540
            GNGW+DS GG GG  GGGGWGG+GGNSKGNWGGSG SNSGGWGS
Sbjct: 1561 GNGWNDSTGGSGGGSGGGGWGGTGGNSKGNWGGSGGSNSGGWGS 1600

[Close]

BLAST of MS021963 vs. ExPASy TrEMBL
Match: A0A6J1FBX2 (Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC111444018 PE=3 SV=1)

HSP 1 Score: 2789.6 bits (7230), Expect = 0.0e+00
Identity = 1443/1545 (93.40%), Postives = 1493/1545 (96.63%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDNVEPSGFSDDEDFVESSRGGR
Sbjct: 82   KEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGGR 141

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEEVDEDGAP+RR
Sbjct: 142  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRR 201

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            +KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+HEW EKRLEDEFEPIVIS
Sbjct: 202  RKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVIS 261

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPP-MDEISLEDETSWIHGHLANGTNSLFGTA 240
            EKYMTEKDDQIREID+PERMQISEESTGPPP MDE   ++E SWIHGH+ANG NSLFG A
Sbjct: 262  EKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNA 321

Query: 241  SGQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPT 300
            SGQDLSV K DILRFLDLVHVQKLDIPFI MYRKEEILSLLKDT+HE+ DDQ +NEK P+
Sbjct: 322  SGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPS 381

Query: 301  LKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMK 360
            LKWHKILWAIQ+LDKKWLLLQKRKNAL+SYY KR +EE+ RIYDETRLSLN QLF+SVMK
Sbjct: 382  LKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSVMK 441

Query: 361  SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY 420
            SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY
Sbjct: 442  SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY 501

Query: 421  SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP 480
            SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP
Sbjct: 502  SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP 561

Query: 481  CVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAE 540
            CVRKHVRSY+MDYAVISTSPT DGNV IDSFHQFS VKWLREKPLSRFEDAQWLLIQKAE
Sbjct: 562  CVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAE 621

Query: 541  EEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME 600
            EEKLL VTLKLPEKHLNKLI DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME
Sbjct: 622  EEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME 681

Query: 601  KEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPA 660
            KEAR+LM S+AKNWLLMEYGK+LWNK+SVGPYQHKENDISSDEEAAPRVMACCWGPGKPA
Sbjct: 682  KEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPA 741

Query: 661  TTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL 720
            TTFVMLDS+GEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL
Sbjct: 742  TTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL 801

Query: 721  SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGS 780
            SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG 
Sbjct: 802  SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG- 861

Query: 781  IVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQ 840
            IVKRAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+TPD+KYGMVEQVMV+VTNQ
Sbjct: 862  IVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQ 921

Query: 841  VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV 900
            VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV
Sbjct: 922  VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV 981

Query: 901  NAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAE 960
            NAVGFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVFDEDVKGDANDDEDAE
Sbjct: 982  NAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAE 1041

Query: 961  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1020
            MAIEHVRDRPHLLRTLDVDEY+ SK REDKR+TFLDIKRELM GFQDWRKQYEEPSQDEE
Sbjct: 1042 MAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEE 1101

Query: 1021 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1080
            FYMISGETEDTLAEG+IVQATVRKVQGQRAICGLESGLTGMLMKED+ DDSR+ISDLSDR
Sbjct: 1102 FYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYEDDSRDISDLSDR 1161

Query: 1081 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1140
            LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+Q+TR+LDPYYHEDRSSLQSEQ+KSR
Sbjct: 1162 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSR 1221

Query: 1141 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1200
            KEKELAKK FKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIY+
Sbjct: 1222 KEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYN 1281

Query: 1201 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1260
            GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLK MLSYR
Sbjct: 1282 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYR 1341

Query: 1261 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1320
            KFR+GTKAEVDELM+IEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG
Sbjct: 1342 KFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1401

Query: 1321 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1380
            FKFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG
Sbjct: 1402 FKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1461

Query: 1381 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNN 1440
            GSSHDGGWRSQS DRDRSSTPGSRTGR+DNRNSG RDGHPSGLPRPYGGRGRGRGSYNNN
Sbjct: 1462 GSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYGGRGRGRGSYNNN 1521

Query: 1441 RGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGS-GGG 1500
            RG   NNER DSSYD SRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW SGGS GGG
Sbjct: 1522 RG---NNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGG 1581

Query: 1501 GNGWSDSGGDGGGGGGWGGSGGNSKGNW----GGSGASNSGGWGS 1540
            GNG SDS   GGGGGGWGG+ GNSKGNW    GGSG SNSGGWGS
Sbjct: 1582 GNGLSDS---GGGGGGWGGT-GNSKGNWGGGGGGSGPSNSGGWGS 1618

[Close]

BLAST of MS021963 vs. ExPASy TrEMBL
Match: A0A6J1HNV8 (Transcription elongation factor spt6 OS=Cucurbita maxima OX=3661 GN=LOC111465338 PE=3 SV=1)

HSP 1 Score: 2786.9 bits (7223), Expect = 0.0e+00
Identity = 1440/1543 (93.32%), Postives = 1490/1543 (96.57%), Query Frame = 0


Query: 1    REEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGGR 60
            +EEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDNVEPSGFSDDEDFVESSRGGR
Sbjct: 83   KEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGGR 142

Query: 61   TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRR 120
            TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFIVDEEVDEDGAP+RR
Sbjct: 143  TAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRR 202

Query: 121  KKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVIS 180
            +KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+HEW EKRLEDEFEPIVIS
Sbjct: 203  RKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVIS 262

Query: 181  EKYMTEKDDQIREIDIPERMQISEESTGPPP-MDEISLEDETSWIHGHLANGTNSLFGTA 240
            EKYMTEKDDQIREID+PERMQISEESTGPPP MDE   ++E SWIHGH+ANG NSLFG A
Sbjct: 263  EKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNA 322

Query: 241  SGQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKAPT 300
            SGQDLSV K DILRFLDLVHVQKLDIPFI MYRKEEILSLLKDT+HE+ DDQ +NEK P+
Sbjct: 323  SGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPS 382

Query: 301  LKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMK 360
            LKWHKILWAIQ+LDKKWLLLQKRKNAL+SYY KR +EE+ RIYDETRLSLN QLF+SVMK
Sbjct: 383  LKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSVMK 442

Query: 361  SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY 420
            SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY
Sbjct: 443  SLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGY 502

Query: 421  SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP 480
            SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP
Sbjct: 503  SSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEP 562

Query: 481  CVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAE 540
            CVRKHVRSY+MDYAVISTSPT DGNV IDSFHQFS VKWLREKPLSRFEDAQWLLIQKAE
Sbjct: 563  CVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAE 622

Query: 541  EEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME 600
            EEKLL VTLKLPEKHLNKLI DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME
Sbjct: 623  EEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSME 682

Query: 601  KEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPA 660
            KEAR+LM S+AKNWLLMEYGK+LWNK+SVGPYQHKENDISSDEEAAPRVMACCWGPGKPA
Sbjct: 683  KEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPA 742

Query: 661  TTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL 720
            TTFVMLDS+GEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL
Sbjct: 743  TTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNL 802

Query: 721  SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGS 780
            SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG 
Sbjct: 803  SCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSG- 862

Query: 781  IVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQ 840
            IVKRAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+TPD+KYGM+EQVMV+VTNQ
Sbjct: 863  IVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMIEQVMVNVTNQ 922

Query: 841  VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV 900
            VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV
Sbjct: 923  VGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFV 982

Query: 901  NAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAE 960
            NAVGFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVFDEDVKGDANDDEDAE
Sbjct: 983  NAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAE 1042

Query: 961  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1020
            MAIEHVRDRPHLLRTLDVDEY+ SK REDKR+TFLDIKRELM GFQDWRKQYEEPSQDEE
Sbjct: 1043 MAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEE 1102

Query: 1021 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1080
            FYMISGETEDTLAEG+IVQATVRKVQGQRAICGLESGLTGMLMKED+ADDSR+ISDLSDR
Sbjct: 1103 FYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYADDSRDISDLSDR 1162

Query: 1081 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1140
            LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+Q+TR+LDPYYHEDRSSLQSEQ+KSR
Sbjct: 1163 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSR 1222

Query: 1141 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1200
            KEKELAKK FKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRGPSFLTLTLKIY+
Sbjct: 1223 KEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYN 1282

Query: 1201 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1260
            GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLV+HLK MLSYR
Sbjct: 1283 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYR 1342

Query: 1261 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1320
            KFR+GTKAEVDELM+IEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG
Sbjct: 1343 KFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1402

Query: 1321 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1380
            FKFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG
Sbjct: 1403 FKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1462

Query: 1381 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNN 1440
            GSSHDGGWRSQS DRDRSSTPGSRTGRNDNRNSG RDGHPSGLPRPYG  GRGRGSYNNN
Sbjct: 1463 GSSHDGGWRSQSYDRDRSSTPGSRTGRNDNRNSGSRDGHPSGLPRPYG--GRGRGSYNNN 1522

Query: 1441 RGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGS-GGG 1500
            RG   NNER DSSYD SRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFPGGW SGGS GGG
Sbjct: 1523 RG---NNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGG 1582

Query: 1501 GNGWSDSGGDGGGGGGWGGSGGNSKGNW--GGSGASNSGGWGS 1540
            GNG SDS     GGGGWGG+ GNSKGNW  GGSG SNSGGWGS
Sbjct: 1583 GNGLSDS-----GGGGWGGNSGNSKGNWGGGGSGPSNSGGWGS 1614

[Close]

BLAST of MS021963 vs. TAIR 10
Match: AT1G65440.1 (global transcription factor group B1 )

HSP 1 Score: 2013.4 bits (5215), Expect = 0.0e+00
Identity = 1103/1563 (70.57%), Postives = 1263/1563 (80.81%), Query Frame = 0


Query: 6    LDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGG--RTAE 65
            LDEDDY LL+DNN+  ++    +++KRLKKAQR+     G S D++F   SRGG  R+AE
Sbjct: 89   LDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQGESSDDEF--DSRGGTRRSAE 148

Query: 66   EKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 125
            +K+K  LF D +   P +D+ +EE+   EE+ V  G EDEMADFIVDE  D++  P +R 
Sbjct: 149  DKIKDRLFDDVDVDDPPDDVGDEEDLVVEEDVV--GSEDEMADFIVDE--DDEHGPPKRG 208

Query: 126  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 185
              KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L S++  E+RLEDEFEP V+SE
Sbjct: 209  NSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQRMERRLEDEFEPTVLSE 268

Query: 186  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 245
            KYMT  DD+IR++DIPERMQISEESTG PP+DEIS+E+E++WI+  LA+      GT  G
Sbjct: 269  KYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIYAQLASQLRESDGTFDG 328

Query: 246  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNE-KAPTL 305
            +  SV KDDI +FL+L HVQKL+IPFI MYRKE+  SLL     +  D  G N+ K P  
Sbjct: 329  RGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL-----DTGDFDGANQGKKPET 388

Query: 306  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 365
            KWHK+ W I +LDKKWLLL+KRK AL  YY+KR+EEESRR+YDETRL+LN  LFESV+KS
Sbjct: 389  KWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKS 448

Query: 366  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 425
            LK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS YSICSKAGLWEVA KFGYS
Sbjct: 449  LKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYS 508

Query: 426  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 485
            +EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   AVLKGARHMAA+EISCEP 
Sbjct: 509  AEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPS 568

Query: 486  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 545
            V+K+VR  +M+ AV+STSPT DGN  IDSFHQFS +KWLREKPLS+FE AQWLLIQK EE
Sbjct: 569  VKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEE 628

Query: 546  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 605
            EKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQRKLIL+DAL  FLLPSMEK
Sbjct: 629  EKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEK 688

Query: 606  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 665
            EARSL+ SRAK+ LL EYG++LWNK+S GPYQ KE DI+ DEEAAPRVMACCWGPGKP  
Sbjct: 689  EARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPN 748

Query: 666  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 725
            TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLKFM DHQPHVV LGAVNLS
Sbjct: 749  TFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLS 808

Query: 726  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 785
            CTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRLYENSRIS +QL  QSG+ 
Sbjct: 809  CTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGN- 868

Query: 786  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 845
            V+RAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+  DEKYGMVEQVMVD+TNQV
Sbjct: 869  VRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQV 928

Query: 846  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 905
            G+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF RKD +  HGLGKKVFVN
Sbjct: 929  GIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLGKKVFVN 988

Query: 906  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA-E 965
            A GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAKD++DEDV+GD+NDDEDA E
Sbjct: 989  AAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIE 1048

Query: 966  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1025
            MAIEHVRDRP  LR + +DEY ASKKRE+K+ET+ +I REL  GFQDWR  ++EPS DEE
Sbjct: 1049 MAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEE 1108

Query: 1026 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1085
            FYMISGETEDT+AEGRIVQA+VR++Q  RAIC L+SGLTGMLMKEDF+DD R+I DL+D+
Sbjct: 1109 FYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQ 1168

Query: 1086 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1145
            L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NR+Q  +++D YYHEDR+SLQ  +EK+R
Sbjct: 1169 LKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKAR 1228

Query: 1146 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1205
            KEKEL +KHFK RMIVHPRF+NITAD+A E+LSDKD GESIVRPSSRG +FLTLTLKIYD
Sbjct: 1229 KEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYD 1288

Query: 1206 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1265
            GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMDRYVDPLVSHLK ML+YR
Sbjct: 1289 GVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYR 1348

Query: 1266 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1325
            KFR+GTK+EVD+L+RIEK E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKG
Sbjct: 1349 KFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKG 1408

Query: 1326 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1385
            FKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMRSPA  GS   S GS WG
Sbjct: 1409 FKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGS---SGGSGWG 1468

Query: 1386 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNN 1445
             S  +GGW+  S   DRS   GS  G  + RN GGRDGHPSG PRPYGGRGRGRG     
Sbjct: 1469 SSQSEGGWKGNS---DRS---GSGRG-GEYRNGGGRDGHPSGAPRPYGGRGRGRG---RG 1528

Query: 1446 RGNNVNNERQDSSYD-----------------GSRWDSTSKDGDDGLSNFPGAKIQNSPG 1505
            R +++N++RQD + D                 G  W S S     G  +  G   ++   
Sbjct: 1529 RRDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGGWGSESAGKKTGGGSTGGWGSESGGN 1588

Query: 1506 KEAFPGGWGSGGSGGGGNGW-SDSGG-----DGGGGGGWGGSGGNSKGNWGGSGASNSGG 1540
            K    G WGSG  GGG  GW +DSGG     DGG G G GG G +     GG  +S  GG
Sbjct: 1589 KSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSDWGNESGGKKSSADGG 1618

[Close]

BLAST of MS021963 vs. TAIR 10
Match: AT1G65440.2 (global transcription factor group B1 )

HSP 1 Score: 2011.9 bits (5211), Expect = 0.0e+00
Identity = 1076/1501 (71.69%), Postives = 1234/1501 (82.21%), Query Frame = 0


Query: 6    LDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGG--RTAE 65
            LDEDDY LL+DNN+  ++    +++KRLKKAQR+     G S D++F   SRGG  R+AE
Sbjct: 89   LDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQGESSDDEF--DSRGGTRRSAE 148

Query: 66   EKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 125
            +K+K  LF D +   P +D+ +EE+   EE+ V  G EDEMADFIVDE  D++  P +R 
Sbjct: 149  DKIKDRLFDDVDVDDPPDDVGDEEDLVVEEDVV--GSEDEMADFIVDE--DDEHGPPKRG 208

Query: 126  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 185
              KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L S++  E+RLEDEFEP V+SE
Sbjct: 209  NSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQRMERRLEDEFEPTVLSE 268

Query: 186  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 245
            KYMT  DD+IR++DIPERMQISEESTG PP+DEIS+E+E++WI+  LA+      GT  G
Sbjct: 269  KYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIYAQLASQLRESDGTFDG 328

Query: 246  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNE-KAPTL 305
            +  SV KDDI +FL+L HVQKL+IPFI MYRKE+  SLL     +  D  G N+ K P  
Sbjct: 329  RGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL-----DTGDFDGANQGKKPET 388

Query: 306  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 365
            KWHK+ W I +LDKKWLLL+KRK AL  YY+KR+EEESRR+YDETRL+LN  LFESV+KS
Sbjct: 389  KWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKS 448

Query: 366  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 425
            LK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS YSICSKAGLWEVA KFGYS
Sbjct: 449  LKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYS 508

Query: 426  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 485
            +EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   AVLKGARHMAA+EISCEP 
Sbjct: 509  AEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPS 568

Query: 486  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 545
            V+K+VR  +M+ AV+STSPT DGN  IDSFHQFS +KWLREKPLS+FE AQWLLIQK EE
Sbjct: 569  VKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEE 628

Query: 546  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 605
            EKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQRKLIL+DAL  FLLPSMEK
Sbjct: 629  EKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEK 688

Query: 606  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 665
            EARSL+ SRAK+ LL EYG++LWNK+S GPYQ KE DI+ DEEAAPRVMACCWGPGKP  
Sbjct: 689  EARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPN 748

Query: 666  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 725
            TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLKFM DHQPHVV LGAVNLS
Sbjct: 749  TFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLS 808

Query: 726  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 785
            CTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRLYENSRIS +QL  QSG+ 
Sbjct: 809  CTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGN- 868

Query: 786  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 845
            V+RAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+  DEKYGMVEQVMVD+TNQV
Sbjct: 869  VRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQV 928

Query: 846  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 905
            G+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF RKD +  HGLGKKVFVN
Sbjct: 929  GIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLGKKVFVN 988

Query: 906  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA-E 965
            A GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAKD++DEDV+GD+NDDEDA E
Sbjct: 989  AAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIE 1048

Query: 966  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1025
            MAIEHVRDRP  LR + +DEY ASKKRE+K+ET+ +I REL  GFQDWR  ++EPS DEE
Sbjct: 1049 MAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEE 1108

Query: 1026 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1085
            FYMISGETEDT+AEGRIVQA+VR++Q  RAIC L+SGLTGMLMKEDF+DD R+I DL+D+
Sbjct: 1109 FYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQ 1168

Query: 1086 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1145
            L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NR+Q  +++D YYHEDR+SLQ  +EK+R
Sbjct: 1169 LKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKAR 1228

Query: 1146 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1205
            KEKEL +KHFK RMIVHPRF+NITAD+A E+LSDKD GESIVRPSSRG +FLTLTLKIYD
Sbjct: 1229 KEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYD 1288

Query: 1206 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1265
            GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMDRYVDPLVSHLK ML+YR
Sbjct: 1289 GVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYR 1348

Query: 1266 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1325
            KFR+GTK+EVD+L+RIEK E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKG
Sbjct: 1349 KFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKG 1408

Query: 1326 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1385
            FKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMRSPA  GS   S GS WG
Sbjct: 1409 FKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGS---SGGSGWG 1468

Query: 1386 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNN 1445
             S  +GGW+  S   DRS   GS  G  + RN GGRDGHPSG PRPYGGRGRGRG     
Sbjct: 1469 SSQSEGGWKGNS---DRS---GSGRG-GEYRNGGGRDGHPSGAPRPYGGRGRGRG---RG 1528

Query: 1446 RGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFPGGWGSGGSGGGG 1501
            R +++N++RQD + D    D+ + D                       GGWG+ G GG G
Sbjct: 1529 RRDDMNSDRQDGNGDWGNNDTGTAD-----------------------GGWGNSGGGGWG 1533

[Close]

BLAST of MS021963 vs. TAIR 10
Match: AT1G65440.3 (global transcription factor group B1 )

HSP 1 Score: 1976.8 bits (5120), Expect = 0.0e+00
Identity = 1039/1418 (73.27%), Postives = 1188/1418 (83.78%), Query Frame = 0


Query: 6    LDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGFSDDEDFVESSRGG--RTAE 65
            LDEDDY LL+DNN+  ++    +++KRLKKAQR+     G S D++F   SRGG  R+AE
Sbjct: 60   LDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQGESSDDEF--DSRGGTRRSAE 119

Query: 66   EKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPVRRK 125
            +K+K  LF D +   P +D+ +EE+   EE+ V  G EDEMADFIVDE  D++  P +R 
Sbjct: 120  DKIKDRLFDDVDVDDPPDDVGDEEDLVVEEDVV--GSEDEMADFIVDE--DDEHGPPKRG 179

Query: 126  KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPIVISE 185
              KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L S++  E+RLEDEFEP V+SE
Sbjct: 180  NSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQRMERRLEDEFEPTVLSE 239

Query: 186  KYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFGTASG 245
            KYMT  DD+IR++DIPERMQISEESTG PP+DEIS+E+E++WI+  LA+      GT  G
Sbjct: 240  KYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIYAQLASQLRESDGTFDG 299

Query: 246  QDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNE-KAPTL 305
            +  SV KDDI +FL+L HVQKL+IPFI MYRKE+  SLL     +  D  G N+ K P  
Sbjct: 300  RGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL-----DTGDFDGANQGKKPET 359

Query: 306  KWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESVMKS 365
            KWHK+ W I +LDKKWLLL+KRK AL  YY+KR+EEESRR+YDETRL+LN  LFESV+KS
Sbjct: 360  KWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYLFESVIKS 419

Query: 366  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 425
            LK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS YSICSKAGLWEVA KFGYS
Sbjct: 420  LKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYS 479

Query: 426  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 485
            +EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   AVLKGARHMAA+EISCEP 
Sbjct: 480  AEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAVEISCEPS 539

Query: 486  VRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEE 545
            V+K+VR  +M+ AV+STSPT DGN  IDSFHQFS +KWLREKPLS+FE AQWLLIQK EE
Sbjct: 540  VKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEE 599

Query: 546  EKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 605
            EKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQRKLIL+DAL  FLLPSMEK
Sbjct: 600  EKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAFLLPSMEK 659

Query: 606  EARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 665
            EARSL+ SRAK+ LL EYG++LWNK+S GPYQ KE DI+ DEEAAPRVMACCWGPGKP  
Sbjct: 660  EARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPN 719

Query: 666  TFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 725
            TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLKFM DHQPHVV LGAVNLS
Sbjct: 720  TFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLS 779

Query: 726  CTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGSI 785
            CTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRLYENSRIS +QL  QSG+ 
Sbjct: 780  CTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGN- 839

Query: 786  VKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDVTNQV 845
            V+RAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+  DEKYGMVEQVMVD+TNQV
Sbjct: 840  VRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITNQV 899

Query: 846  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 905
            G+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF RKD +  HGLGKKVFVN
Sbjct: 900  GIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLGKKVFVN 959

Query: 906  AVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDA-E 965
            A GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAKD++DEDV+GD+NDDEDA E
Sbjct: 960  AAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIE 1019

Query: 966  MAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPSQDEE 1025
            MAIEHVRDRP  LR + +DEY ASKKRE+K+ET+ +I REL  GFQDWR  ++EPS DEE
Sbjct: 1020 MAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEE 1079

Query: 1026 FYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISDLSDR 1085
            FYMISGETEDT+AEGRIVQA+VR++Q  RAIC L+SGLTGMLMKEDF+DD R+I DL+D+
Sbjct: 1080 FYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQ 1139

Query: 1086 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHEDRSSLQSEQEKSR 1145
            L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NR+Q  +++D YYHEDR+SLQ  +EK+R
Sbjct: 1140 LKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKAR 1199

Query: 1146 KEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1205
            KEKEL +KHFK RMIVHPRF+NITAD+A E+LSDKD GESIVRPSSRG +FLTLTLKIYD
Sbjct: 1200 KEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTLTLKIYD 1259

Query: 1206 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKAMLSYR 1265
            GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMDRYVDPLVSHLK ML+YR
Sbjct: 1260 GVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLKTMLNYR 1319

Query: 1266 KFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1325
            KFR+GTK+EVD+L+RIEK E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYIGLYPKG
Sbjct: 1320 KFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKG 1379

Query: 1326 FKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWG 1385
            FKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMRSPA  GS   S GS WG
Sbjct: 1380 FKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGS---SGGSGWG 1439

Query: 1386 GSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDG 1418
             S  +GGW+  +SDR  S   G         + GGR G
Sbjct: 1440 SSQSEGGWKG-NSDRSGSGRGGEYRNGGWGNSGGGRLG 1453

[Close]

BLAST of MS021963 vs. TAIR 10
Match: AT1G63210.1 (Transcription elongation factor Spt6 )

HSP 1 Score: 1574.7 bits (4076), Expect = 0.0e+00
Identity = 810/1229 (65.91%), Postives = 987/1229 (80.31%), Query Frame = 0


Query: 118  VRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHEKRLEDEFEPI 177
            +RRKK+K K+     G  S AL+ A+++FGD +ELL+LRK++L  +E  E++LEDEFEP+
Sbjct: 1    MRRKKMKYKQ-----GTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPM 60

Query: 178  VISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHGHLANGTNSLFG 237
            V+SEKYMTEKDD+IR++D+PERMQI EE+ G   +D++S+++E++WI+  L         
Sbjct: 61   VLSEKYMTEKDDEIRKLDVPERMQIFEEAIGIVSLDDMSIQEESNWIYARLLQ------- 120

Query: 238  TASGQDLSVVKDDILRFLDLVHVQKLDIPFITMYRKEEILSLLKDTQHEAVDDQGKNEKA 297
               GQ   + KDDI++FL++ HVQKL+IPFI MYRKE+  SLL  +  +        +K 
Sbjct: 121  -EQGQGCLINKDDIVKFLEMFHVQKLEIPFIAMYRKEQCRSLLDSSDDDHDGSDFNLDKK 180

Query: 298  PTLKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETRLSLNNQLFESV 357
               KWHK+LW IQ+LD+KW+LL+KRK AL  YY+KRFEEE+          LN  LFESV
Sbjct: 181  LETKWHKVLWMIQDLDRKWVLLRKRKTALFGYYTKRFEEET------CMSDLNKSLFESV 240

Query: 358  MKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKF 417
            +KSL+AAE+EREVDDVDSKFNLHFP  E  +DEGQ+KRP RKS YSICSK G+ E A KF
Sbjct: 241  IKSLQAAETEREVDDVDSKFNLHFPHCE--IDEGQYKRPNRKSQYSICSKFGIKEFANKF 300

Query: 418  GYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISC 477
            GYS+EQ GL LSLEK+  DELED K+TPEEMA N+ CAMF   QAVLKGARHMAA+EISC
Sbjct: 301  GYSAEQLGLALSLEKVFVDELEDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISC 360

Query: 478  EPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQK 537
            EP +RK+VR  FM+ AV+STSPTPDGNV IDSFH+FS VKWL EKPL +F+  QWLLIQK
Sbjct: 361  EPSIRKYVRGIFMENAVVSTSPTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQK 420

Query: 538  AEEEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPS 597
            AEEEKLL VT KLPE  +N++I++ +E+YLS GVSK AQLWNEQRKLIL+DA+ GF+LPS
Sbjct: 421  AEEEKLLQVTFKLPENQMNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPS 480

Query: 598  MEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAPRVMACCWGPGK 657
            MEKEARSL+ SRAK  LL EYG+ LWNK+S GPY+   N  +S+EEAAPRV+ACCWGPG 
Sbjct: 481  MEKEARSLLTSRAKTQLLSEYGQVLWNKVSSGPYRRNNN--TSEEEAAPRVLACCWGPGN 540

Query: 658  PATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAV 717
            P TTFVMLDSSGE++DVLY+GS+ LRS++VNDQ+RKK DQ+R LKF+ DHQP V+ L AV
Sbjct: 541  PETTFVMLDSSGELVDVLYSGSIGLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAV 600

Query: 718  NLSCTRLKDDIYEIIFKMVEENPRD-VGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQ 777
            NLSC RLKD+IYE IF+MVEE P + V   +    +VY DESLPRLYENSRISS+QL  Q
Sbjct: 601  NLSCVRLKDEIYEAIFQMVEELPLNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQ 660

Query: 778  SGSIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYGMVEQVMVDV 837
            +G IVKRAV+LGRYLQNPLAM++TLCGPG++ILSWKL+  ++F+ PDEKY MVEQVMVD+
Sbjct: 661  AG-IVKRAVSLGRYLQNPLAMISTLCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDI 720

Query: 838  TNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKK 897
            TNQVG+D NLA SHEWLFSPLQF++GLGPRKAASLQ+SLVRAGSIF RK+ +  HG+GKK
Sbjct: 721  TNQVGIDINLAASHEWLFSPLQFVSGLGPRKAASLQKSLVRAGSIFVRKELIN-HGIGKK 780

Query: 898  VFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED-VKGDANDD 957
            VFVNA GFLR+RRSGLA SSSQFIDLLDDTRIHPESY LAQELAKDV+  D V+GD  +D
Sbjct: 781  VFVNAAGFLRIRRSGLACSSSQFIDLLDDTRIHPESYGLAQELAKDVYAHDTVRGD--ED 840

Query: 958  EDAEMAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDWRKQYEEPS 1017
            +  EMAIEHVRD P  LR + +DEY  SK +E+K+ET+  I REL  GFQDWR  ++E  
Sbjct: 841  DAIEMAIEHVRDEPASLRKIVLDEYLRSKNQENKKETYSLIMRELSCGFQDWRSLFKEVD 900

Query: 1018 QDEEFYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFADDSREISD 1077
             DEEFYMISGET++T+ EGRIVQATV+KV   +A C L+ GL G+L+KED++DD R+I D
Sbjct: 901  SDEEFYMISGETKETIGEGRIVQATVKKVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVD 960

Query: 1078 LSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHED-RSSLQSE 1137
            LS++L EGDIVTCK+KSI K RY V LVCKESEMR +RN    D+D YYHE+ R+S+  E
Sbjct: 961  LSNKLCEGDIVTCKVKSILKQRYHVLLVCKESEMRKHRN--LGDVDDYYHEEKRNSVLIE 1020

Query: 1138 QEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRGPSFLTLT 1197
            +EK  KE    KK FK RMIVHPRF+NITA++A  +LSDK+ GESIVRPSSRG + LTL 
Sbjct: 1021 KEKVPKE----KKQFKSRMIVHPRFQNITAEQATVYLSDKNIGESIVRPSSRGLNHLTLM 1080

Query: 1198 LKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVSHLKA 1257
            +KI D VYA+K+I+EG KE+KDI SL RIGKTLKIG +TFEDLDEVMDRYVDPLV+HL  
Sbjct: 1081 IKISDNVYANKEIIEGEKENKDIVSLQRIGKTLKIGNETFEDLDEVMDRYVDPLVTHLMT 1140

Query: 1258 MLSYRKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIG 1317
            ML++RKFR GTK+E+D+L+R+EK   P  +VY FG+SHEHPG+FIL+YIRS NPHHEYIG
Sbjct: 1141 MLNHRKFRTGTKSEIDDLLRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIG 1196

Query: 1318 LYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1344
            LYPKGFKFRKRMF D+D+L AYF+RHID+
Sbjct: 1201 LYPKGFKFRKRMFGDLDKLAAYFKRHIDN 1196

The following BLAST results are available for this feature:

BLAST of MS021963 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149910.1	0.0e+00	99.68	transcription elongation factor SPT6 homolog [Momordica charantia]	[more]
XP_008441794.1	0.0e+00	93.79	PREDICTED: transcription elongation factor SPT6 [Cucumis melo]	[more]
TYK28898.1	0.0e+00	93.85	transcription elongation factor SPT6 [Cucumis melo var. makuwa]	[more]
XP_023537141.1	0.0e+00	93.52	transcription elongation factor SPT6 homolog isoform X2 [Cucurbita pepo subsp. p...	[more]
XP_023537140.1	0.0e+00	93.46	transcription elongation factor SPT6 homolog isoform X1 [Cucurbita pepo subsp. p...	[more]

BLAST of MS021963 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MS85	0.0e+00	70.57	Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9CAM1	0.0e+00	62.68	Transcription elongation factor SPT6-like OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q8UVK2	1.5e-151	28.53	Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1	[more]
Q7KZ85	3.6e-150	28.64	Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2	[more]
Q62383	1.5e-148	28.28	Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=...	[more]

BLAST of MS021963 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D721	0.0e+00	99.68	Transcription elongation factor spt6 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A1S3B3S8	0.0e+00	93.79	Transcription elongation factor spt6 OS=Cucumis melo OX=3656 GN=LOC103485847 PE=...	[more]
A0A5D3DZK9	0.0e+00	93.85	Transcription elongation factor spt6 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1FBX2	0.0e+00	93.40	Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC1114440...	[more]
A0A6J1HNV8	0.0e+00	93.32	Transcription elongation factor spt6 OS=Cucurbita maxima OX=3661 GN=LOC111465338...	[more]

BLAST of MS021963 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65440.1	0.0e+00	70.57	global transcription factor group B1	[more]
AT1G65440.2	0.0e+00	71.69	global transcription factor group B1	[more]
AT1G65440.3	0.0e+00	73.27	global transcription factor group B1	[more]
AT1G63210.1	0.0e+00	65.91	Transcription elongation factor Spt6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 1032..1105 e-value: 5.0E-11 score: 52.6
IPR006641	YqgF/RNase H-like domain	SMART	SM00732	rnase_8s	coord: 646..764 e-value: 1.4E-21 score: 87.7
IPR028231	Transcription elongation factor Spt6, YqgF domain	PFAM	PF14639	YqgF	coord: 645..802 e-value: 2.4E-15 score: 56.6
IPR041692	HHH domain 9	PFAM	PF17674	HHH_9	coord: 922..1008 e-value: 3.9E-7 score: 30.9
IPR017072	Transcription elongation factor Spt6	PIRSF	PIRSF036947	Spt6	coord: 1..1394 e-value: 0.0 score: 1493.3
IPR017072	Transcription elongation factor Spt6	PANTHER	PTHR10145	TRANSCRIPTION ELONGATION FACTOR SPT6	coord: 2..1510
IPR023323	Tex-like domain superfamily	GENE3D	1.10.3500.10		coord: 392..840 e-value: 7.2E-216 score: 721.1
IPR028083	Spt6 acidic, N-terminal domain	PFAM	PF14632	SPT6_acidic	coord: 2..39 e-value: 4.8E-6 score: 27.0
IPR042066	Spt6, Death-like domain	GENE3D	1.10.10.2740		coord: 916..1007 e-value: 7.2E-216 score: 721.1
IPR037027	YqgF/RNase H-like domain superfamily	GENE3D	3.30.420.140		coord: 636..1026 e-value: 7.2E-216 score: 721.1
IPR035420	Spt6, SH2 domain	PFAM	PF14633	SH2_2	coord: 1123..1340 e-value: 6.2E-73 score: 244.7
None	No IPR available	GENE3D	2.40.50.140		coord: 1027..1115 e-value: 2.2E-9 score: 39.3
None	No IPR available	GENE3D	1.10.150.850		coord: 174..910 e-value: 7.2E-216 score: 721.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1366..1408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1435..1451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1363..1539
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1115..1144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1522..1539
None	No IPR available	PANTHER	PTHR10145:SF7	TRANSCRIPTION ELONGATION FACTOR SPT6	coord: 2..1510
None	No IPR available	SUPERFAMILY	158832	Tex N-terminal region-like	coord: 243..626
IPR032706	Transcription elongation factor Spt6, helix-hairpin-helix motif	PFAM	PF14635	HHH_7	coord: 806..907 e-value: 8.6E-20 score: 71.0
IPR036860	SH2 domain superfamily	GENE3D	3.30.505.10	SH2 domain	coord: 1142..1253 e-value: 2.3E-34 score: 119.4
IPR036860	SH2 domain superfamily	GENE3D	3.30.505.10	SH2 domain	coord: 1254..1350 e-value: 1.6E-26 score: 94.1
IPR036860	SH2 domain superfamily	SUPERFAMILY	55550	SH2 domain	coord: 1159..1245
IPR023319	Tex-like protein, HTH domain superfamily	GENE3D	1.10.10.650		coord: 207..391 e-value: 7.2E-216 score: 721.1
IPR028088	Helix-turn-helix DNA-binding domain of Spt6	PFAM	PF14641	HTH_44	coord: 213..332 e-value: 1.3E-9 score: 38.5
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 1034..1105 score: 12.101631
IPR035018	Spt6, SH2 domain, C terminus	CDD	cd09928	SH2_Cterm_SPT6_like	coord: 1255..1341 e-value: 1.36346E-31 score: 116.941
IPR035019	Spt6, SH2 domain, N terminus	CDD	cd09918	SH2_Nterm_SPT6_like	coord: 1156..1244 e-value: 2.95955E-34 score: 124.657
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 921..1009
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 818..908
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 646..802
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1029..1118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021963.1	MS021963.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding