MS021906 (gene) Bitter gourd (TR) v1

Overview


Name	MS021906
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ALBINO3-like protein 2, chloroplastic
Location	scaffold110: 5343 .. 10440 (-)
RNA-Seq Expression	MS021906
Synteny	MS021906

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCAGCAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAACTGGGATTGCCTTTGAAGGATGCTCCTGTGGGCACCAATAATCCAGGAAAAGCACCGTTGGATACACCCACCAAGTGGAAAAGAATTTCTGTAGAGAAGTTGTCTCCTAAAGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATTTGATTCGAGTAAATGTAATACAAACGTTATAAGGTTGCTAATGATTAAACTTGACAGTTATCTGTCCAACTCCTATCAAAAGGGCAAAAGGAAAGGGCTATTCCTTTACTGAGGTAAGATCTTGTCTTCCCTCTTTAGATTCCACTATCATCTATATGGGCCTCTCTGGCGGGTGATTTTTTGCCCTAAATTGCAAGGAGAAGGTAACAAAAAAGGTTACACATGACTAATTTAATAATTTAGACAGGCACTTAACAAGGAACCTGAGTATGTTCGAGCTCTGATTGTCATGGGACAAACTCTGTTACAAAGTGGTCAACCTGAAGAGGCTACTGAATACCTAGAGCGTGCAATTTCCAAGGTCTGTATTTAAGTGTTGTATTTTATTTTTCTTATTTGTGTATGATGAATCTTGCTCCTACATGGTATGATGTGTTGACAATTATTGGTGTTCTAGATAATAGTATATGACGATTTCCAGAATTGAGAGTATGATCACCCTTTTCATTGAATTGGATGAGATGAAAAACCTAATTTGGGGAGAGAGCTAATGAACAAGAAAGGAAAAACTTCCAGAAGTAACCAACTTAACAAGGAAAGAAAGGAAAAGAAAAAAAGGAAAAGAAAGAAACGAGCATTTTGCCCAACGAAGAAAAATAAACGAGGAGAAATGATGTACGTAGGGAAAATAATATAATAAAATGGAGAAAAGGGATCTTGGTTCAGAAGGTCATGGGGCCAAGTGGAATCTTTTAAGGGCCTTTTGACAACTCCCCTCGTTATTAAACTTGGCTTGTTTATTTAAGTTGTTTTTTTTCCTTTTTCTTTCTTTTTAACGACGAGGAGTTGGAGCTTTGCTCCCCATACCCAGGAGCACCCATGCCCACCCATGCCCACCCGAAGGCCCGGATCCGGGAGACATTAAGGATTTTTTAATAAAGGGATGCGGATATCTTCATTTTGTATCTATGTCGATATGTAGCTAGGAAGTGCTTTTGTCCTCAATTTTCTATTTGCTGAAGTAGTGATAAATCTCCACATATTTTATATGATCATGATATATAGGATCTTTGTTGCTCATGGCTACTTGGTTTTGACAAGAAGTCTCCAGTAGTTCCTCTAATGTTTTCTTAGTCAATTAGGATTCCTTGAAGTCATTTTCCTTCGCATATTTCTTGCCCTAGTGGTTTTAATTCAGGTTCTACATACTCCTTGACACAACTAACTGTCTCTTACTTCTCCATGTTAGTTTTACCAAACAAAGGAACAATATCTCGTGGTTGACCTTCTACAGACTTTCAAGCTTTCTCAATCAGCATCACTGTAGATTTTGACATTTCTTATTGTTTTTTTAAGTACAAACCTTCTCAAGTTGTTACTTTTAAGTATCTCAAGATTCTGAAAACAATCTTTATACTCTTTAGTGGGATTATGTATAAATTGACTTGCATAACTAACTACCAAATGCATATCAAAATCTAGTGTGATTGAGGTAAATATTGCTTTGTTAATTGGTATATTTTCCTTGCTAAATTAGGATTAGGATCAAGAGGAGTACTACTAGGTTTACAGCCGAACGTGCATGTTTCTTTAGAAGATCGAGGACATATTCTCTTTAAGACATGCACAAATTTTTCTTTGAACGAGTCACTTCTATACCTCAAGACCTTCTAAGTCTATTACTTGGAACTCCTTGGCCAGGAGCTTTTTTTAAATCTCTTATTTCTTCATGGTTTCCAATAAAGATAATGTCATCCAGTTAGACAATGATAATAGCTATTTTTATTTTATGAGAATATTTGACAAAAACCATGTGATCAGATTTACATCGCAAGTTTCGTCTTCCTTTTACAGCTCTAGAAAAATTTTCAAACCACGCTTTTGGGATTGTTCCAAGTGATATCGGGCCTTCCTAAGTTTGCACGGTTTATTGGTGGTCTTTGGAGTTTCTATACCTGCATGAATATCCATGTTTACCTCTTTTGCTAGATCACTAGCCATGTATCCTTATTTTGCTGGGTCACTGTTGAGAAATAATTTTTGTATGTCTAATTAGTGAACAACCTATTGTTATTCACTCACAAAGAGAGAATAATATAGAAATTTAGGGTGCGTTTGGTTGGTGATCTGAAAATAGGGGATTTAATAAAAAATAGAGTTGTATTCTTTATTTTCAGTATTTTTAGATATGTGTTTGGCAGCATATTTGAAAATTGAATCTCAATTTAAAAAATTGTTCAATAAATGTTTAGTAATATATTTGTAAACTAGTGGTAGTTACCAACTAAATATTTAGTACAATTAACATTAACATAAAAATATTTATGAATATTAGAAATCTCATTAGTCTTACCGGTTAAGATTCAAAGAAGGATACATCCGGGATTATGTAGAATTTTCTATAAGTTGGTGGGTAACATTTGTATCCCTTTTGATTTGTAGCATAGACAAAAATATATGCACTTGATGGCCTTAATATCAAGCTTACTTCTCTTGAATAGAAGTCATACACTTAAAAATGCAAAAATGAATTTGAGAGAGGTGTCCAGAATTGGAAGGTGCTCAAGAAGTAATTGGTTCGAGTATAAAGATTTTTCAGAATTAAGAATAGAATCACCATTTTTTTTCTCTTTTTTGAGTTGGACCAGATTTACAACCTGATCTAAGGAGAGAGCTAATGTACAATAAAGGAAATAGTTCTAATGGTAATTAAGTTAACTAGGAAGGAAAGTAAAAGAAAGAAATGGGTATGTTATTTAAGGAAATAAAAATAAAGGGATGAGAAATTTGATAGAACCCGAATGCTAACAATATATTGAAATATAAAAGATAGAATAACTACAATATCATCCAAAGTAATTCGAGGTACTTGGACCCTCCCCTCTCTTGAGTATTCCTTCTCAAGCCTAAACGATGCTACCAATTGCTTACCTTCATCCTTCCCCCGTCACCTTATTTATAAACAAACTCCCTAACCTAATTACTAATATACCCTTAATACCCTAATAATATCACCAGACTATCCTAATAGCAATCCTATCATTATTATTGACTTAAAGGAAAACAATAAAAAAAAAAATATAAAAAGGGGGATCTTAGTCCGTAGGTCACCAGAAAAAGATCCTTTCTTGGAAGAGCTTTTTAACTGTATAGCATGTATGGTACTATCATGTTACCTTTACCTCATCTCTTACATCCCTGAACAAGACGCATGCTTTTAAACGCAATTTAGATATTTTTGATACTCATTTTTTCTCCTCTCTTATTTTAACTAAAACATTAGTTGTTTCTTGTTCAGTTATTTCTTTCCGGTCGTCCCATGGAAGTCGAGGGTGTAGATCTTCTAATTCTTGCTTCCCAATGGGCAGGAGTTGCCAGTATAAGGCAGGTGAGAATAGTCCATGTTTTATTTATGTACCCTTGTCCATGTTTTATTTATTTACCCTATGGCTATTAACAAGGAGATCAAGGTAGTTTGAATCATATCTGTTTATTAGAAACATTCTCCACAACTGTTTATTTACAGCTTGTTATAGAGAATTTAAACATAACTAGGATGGACGTTATCATATAATGTTGATATTTTAATTTTGAAATTCGGTAAATTTTCTTAAGCTTTATGAAGTTCAAATCTTTATTTCCAATGATCCACCAACATTTCATGAAATTCTCATATGTGGACATGTCAGTCAATATGTTTCAGCATTGGACAACCAGCACACATGAATTTTATGATTGGCATGTCTGAGGATAGTTGGAAATGAAGATTTTTTTTCAAGAACAATGAATTTCATCCTTGTACAACTGTGGTTTACCTGTAGCTGGTAAACCACCAGACATTTCAATTTGAAGTGAAATTCATGGTTTCTTTTGGTTGATCTGGGCAATAACCGTCTTGATGAAGTTGATGTTTTGTAGGGTTTATCCCTAGACCTAGCAGTTTGTCATTGCATCACTTTTTTCTTGGATACTTTGACGTAATATCCAAATATCTTTTTCGAGGCTCAGATTGTGACTATTGATTATGTTATAATAACAAAATTTCTCTTCATTATTGTTGTGTCAGGGGAAAATGGTAGAAGGGATTGCCCACCTGGAAAGAATTGCAAATATGAAAGAGCCAGAAGAAGCAAAGAGCAAAGCCCATTATTACGATGGTTTGGTTCTGCTAGCAAGGTTTGAATCAGACCAGTCTATCAGATTCATCTTTCACTTACCACCCATTACCAATGGGGCTTTTTATATTAAAATTTTATTATTATTATTTTTAAAGATCCCACCCTCCCTTTTGTTAAGAAAATGGAAGTGATAAAAATATTGCAGAAGCAATAATAAAAATCTCAATGATGAATAATGAGGAAAAATGAATATAAGAGTATAATTTCAATAGAAGAAGAATTCAAACTTCTAATTGAAGTGATACAAAATTGAATGGTACAAAATCTGGTGATACAAAAAATGTTTTAAAAAGCCTTCCCACTGAAACCTTTAAACTTATTTGAGATTAACAACTTAGAAACTTAAAAACGATAAAAACATTAATGATAAATGTTTGAAGTGGAAACTTAAAGACTTGAAACTGAATGATTAAATCTAACAATAAAGTAGGAAACTTAAAAAATACTAACCGAAATTTAATGCAACTTTAGTTAAGAAAAATATCAAATCTCAACAACTTCCCTCAACAAGAACTCAAAATTTACCTGCGCTTGAAATTTACTAAAATCTTATTTCTTGTCATTTCAGTGCTCTATACAATGAAGGTCGCAAGGCTGAAGCTACCAAATACTTACAGTTAGCTGCAGCTTATAATCCTGCCTACAAAGAATACTTGGATCAATGTGAGGATGATAATGATAAATTAGTCAGCGATCTCGTCAGCAGCAGGAGAGGAGATTAT

mRNA sequence

TTGCAGCAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAACTGGGATTGCCTTTGAAGGATGCTCCTGTGGGCACCAATAATCCAGGAAAAGCACCGTTGGATACACCCACCAAGTGGAAAAGAATTTCTGTAGAGAAGTTGTCTCCTAAAGAATTGCTTGCTTTATCTGTCCAACTCCTATCAAAAGGGCAAAAGGAAAGGGCTATTCCTTTACTGAGACAGGCACTTAACAAGGAACCTGAGTATGTTCGAGCTCTGATTGTCATGGGACAAACTCTGTTACAAAGTGGTCAACCTGAAGAGGCTACTGAATACCTAGAGCGTGCAATTTCCAAGTTATTTCTTTCCGGTCGTCCCATGGAAGTCGAGGGTGTAGATCTTCTAATTCTTGCTTCCCAATGGGCAGGAGTTGCCAGTATAAGGCAGGGGAAAATGGTAGAAGGGATTGCCCACCTGGAAAGAATTGCAAATATGAAAGAGCCAGAAGAAGCAAAGAGCAAAGCCCATTATTACGATGGTTTGGTTCTGCTAGCAAGTGCTCTATACAATGAAGGTCGCAAGGCTGAAGCTACCAAATACTTACAGTTAGCTGCAGCTTATAATCCTGCCTACAAAGAATACTTGGATCAATGTGAGGATGATAATGATAAATTAGTCAGCGATCTCGTCAGCAGCAGGAGAGGAGATTAT

Coding sequence (CDS)

TTGCAGCAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAACTGGGATTGCCTTTGAAGGATGCTCCTGTGGGCACCAATAATCCAGGAAAAGCACCGTTGGATACACCCACCAAGTGGAAAAGAATTTCTGTAGAGAAGTTGTCTCCTAAAGAATTGCTTGCTTTATCTGTCCAACTCCTATCAAAAGGGCAAAAGGAAAGGGCTATTCCTTTACTGAGACAGGCACTTAACAAGGAACCTGAGTATGTTCGAGCTCTGATTGTCATGGGACAAACTCTGTTACAAAGTGGTCAACCTGAAGAGGCTACTGAATACCTAGAGCGTGCAATTTCCAAGTTATTTCTTTCCGGTCGTCCCATGGAAGTCGAGGGTGTAGATCTTCTAATTCTTGCTTCCCAATGGGCAGGAGTTGCCAGTATAAGGCAGGGGAAAATGGTAGAAGGGATTGCCCACCTGGAAAGAATTGCAAATATGAAAGAGCCAGAAGAAGCAAAGAGCAAAGCCCATTATTACGATGGTTTGGTTCTGCTAGCAAGTGCTCTATACAATGAAGGTCGCAAGGCTGAAGCTACCAAATACTTACAGTTAGCTGCAGCTTATAATCCTGCCTACAAAGAATACTTGGATCAATGTGAGGATGATAATGATAAATTAGTCAGCGATCTCGTCAGCAGCAGGAGAGGAGATTAT

Protein sequence

LQQLTLQHPAVRSKLGLPLKDAPVGTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY

Homology

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BLAST of MS021906 vs. NCBI nr
Match: XP_022144503.1 (ALBINO3-like protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 445.7 bits (1145), Expect = 2.5e-121
Identity = 228/231 (98.70%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVGTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQL 60
           +QQLTLQHPAVRSKLGLPLKDAP+GTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQL
Sbjct: 337 IQQLTLQHPAVRSKLGLPLKDAPMGTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQL 396

Query: 61  LSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRP 120
           LSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRP
Sbjct: 397 LSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRP 456

Query: 121 MEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLAS 180
           MEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLAS
Sbjct: 457 MEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLAS 516

Query: 181 ALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           ALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDL+SSRRGDY
Sbjct: 517 ALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLISSRRGDY 567

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BLAST of MS021906 vs. NCBI nr
Match: XP_038890165.1 (ALBINO3-like protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 215/237 (90.72%), Postives = 220/237 (92.83%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP K+ PVG      TNNPGK PLD PTKWK+ISVEKLSPKELL
Sbjct: 341 IQQLTLQHPAVRSKLGLPSKEVPVGTATLGETNNPGKIPLDLPTKWKKISVEKLSPKELL 400

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQ+GQP EAT YLERAISKL
Sbjct: 401 ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQNGQPAEATAYLERAISKL 460

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P EVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEE KSKAHYYDG
Sbjct: 461 FLSGHPTEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYYDG 520

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYLQ AAAYNPAYKEYLDQCE+DNDKLV DLVSSRRGDY
Sbjct: 521 LVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEEDNDKLVGDLVSSRRGDY 577

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BLAST of MS021906 vs. NCBI nr
Match: XP_023546234.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110
Identity = 213/237 (89.87%), Postives = 220/237 (92.83%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP KDAPVG      TN+PGK PL+TPTKWK+I VEKLSPKELL
Sbjct: 338 IQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLETPTKWKKIYVEKLSPKELL 397

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKERAIPLLRQALNK+PEYVRALIVMGQTLLQ+GQP EA  +LERAISKL
Sbjct: 398 ALSVQLLSKGQKERAIPLLRQALNKDPEYVRALIVMGQTLLQNGQPAEAIAFLERAISKL 457

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P EVEG DLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG
Sbjct: 458 FLSGHPTEVEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 517

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYLQ AAAYNPAYKEYLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 518 LVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

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BLAST of MS021906 vs. NCBI nr
Match: XP_022933144.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 7.5e-110
Identity = 212/237 (89.45%), Postives = 219/237 (92.41%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP KDAPVG      TN+PGK PLDTPTKWK+I VEKLSPKELL
Sbjct: 338 IQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWKKIYVEKLSPKELL 397

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKE+AIPLLRQALNK+PEYVRALIVMGQTLLQ+GQP EA  +LERAISKL
Sbjct: 398 ALSVQLLSKGQKEKAIPLLRQALNKDPEYVRALIVMGQTLLQNGQPAEAIAFLERAISKL 457

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P EVEG DLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEE KSKAHYYDG
Sbjct: 458 FLSGHPTEVEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYYDG 517

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYLQ AAAYNPAYKEYLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 518 LVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

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BLAST of MS021906 vs. NCBI nr
Match: XP_022973910.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 406.0 bits (1042), Expect = 2.2e-109
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP KDAPVG      TN+PGK PLDTPTKWK+I VEKLSPKELL
Sbjct: 338 IQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWKKIYVEKLSPKELL 397

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKE+AIPLLRQALNK+PEYVRALIVMGQTLLQ+GQP EA  +LERAISKL
Sbjct: 398 ALSVQLLSKGQKEKAIPLLRQALNKDPEYVRALIVMGQTLLQNGQPAEAIAFLERAISKL 457

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P E EG DLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEE KSKAHYYDG
Sbjct: 458 FLSGHPTEAEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYYDG 517

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYLQ AAAYNPAYKEYLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 518 LVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

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BLAST of MS021906 vs. ExPASy Swiss-Prot
Match: Q8L718 (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 PE=2 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-58
Identity = 125/236 (52.97%), Postives = 169/236 (71.61%), Query Frame = 0


Query: 2   QQLTLQHPAVRSKLGLPLKDAPVGTNNPGKAP------LDTPTKWKRISVEKLSPKELLA 61
           QQL+L+HP V +KLGL  + A  G  +  +        +D+ +K + +S++ L+P+ELL+
Sbjct: 292 QQLSLKHPTVGAKLGLLSQGATPGMGHSMEISESVIKYVDSDSKEQTLSLQTLTPEELLS 351

Query: 62  LSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLF 121
           LSVQ+LSKG KE +I LLR AL K+P YVR L++MGQ LLQ  Q  EATEYLE AISKL 
Sbjct: 352 LSVQVLSKGDKETSIQLLRLALEKDPGYVRGLVLMGQALLQKTQLSEATEYLELAISKL- 411

Query: 122 LSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGL 181
           L   P + E V+LL+LASQWAG A ++QGK+  GI HLER+A ++EP + KSK HY++ L
Sbjct: 412 LDEDPSDAEDVELLMLASQWAGAAYVQQGKLKSGIIHLERVAKLREPGDPKSKEHYFEAL 471

Query: 182 VLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           +LL+SALY EG+  EA K L++   +NPAYK  L+QCED+N+ LVSDLVS R+  +
Sbjct: 472 LLLSSALYKEGQSDEAAKILRVVVDHNPAYKPLLEQCEDENE-LVSDLVSRRKDHF 525

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BLAST of MS021906 vs. ExPASy Swiss-Prot
Match: Q0WUC5 (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.1e-58
Identity = 125/223 (56.05%), Postives = 160/223 (71.75%), Query Frame = 0


Query: 2   QQLTLQHPAVRSKLGLPLKDA-------PVGTN-NPGKAPLDTPTKWKRISVEKLSPKEL 61
           QQ  L HP V +KLGL   D+       P+ TN N GK   D  +K + ISV  L+PKEL
Sbjct: 331 QQSILNHPVVSAKLGLQANDSVQKEAGNPILTNINEGKL-TDPSSKGRLISVHNLTPKEL 390

Query: 62  LALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISK 121
           +ALS + LS G K+++IPLLR AL K+PEY++A+I++GQ L Q  Q  EA + LE+A SK
Sbjct: 391 VALSAKYLSGGHKDKSIPLLRLALEKDPEYLQAMIILGQALYQKDQFAEAAKCLEQAASK 450

Query: 122 LFLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYD 181
           L L   P EVE VDLLI+ASQWAGV++IRQGK  EGI HLER+ANMKEP++ KSKAHY D
Sbjct: 451 L-LDTSPTEVEEVDLLIVASQWAGVSNIRQGKTSEGITHLERVANMKEPDDPKSKAHYLD 510

Query: 182 GLVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDN 217
            LVL +SA++NEGR+ EA KYL+   AY+P++ E L QCE+D+
Sbjct: 511 ALVLYSSAIFNEGRREEAAKYLRRVVAYDPSFSELLKQCEEDD 551

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BLAST of MS021906 vs. ExPASy TrEMBL
Match: A0A6J1CTF9 (ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014174 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 228/231 (98.70%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVGTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQL 60
           +QQLTLQHPAVRSKLGLPLKDAP+GTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQL
Sbjct: 337 IQQLTLQHPAVRSKLGLPLKDAPMGTNNPGKAPLDTPTKWKRISVEKLSPKELLALSVQL 396

Query: 61  LSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRP 120
           LSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRP
Sbjct: 397 LSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFLSGRP 456

Query: 121 MEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLAS 180
           MEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLAS
Sbjct: 457 MEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLVLLAS 516

Query: 181 ALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           ALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDL+SSRRGDY
Sbjct: 517 ALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLISSRRGDY 567

[Close]

BLAST of MS021906 vs. ExPASy TrEMBL
Match: A0A6J1EYX9 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110
Identity = 212/237 (89.45%), Postives = 219/237 (92.41%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP KDAPVG      TN+PGK PLDTPTKWK+I VEKLSPKELL
Sbjct: 338 IQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWKKIYVEKLSPKELL 397

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKE+AIPLLRQALNK+PEYVRALIVMGQTLLQ+GQP EA  +LERAISKL
Sbjct: 398 ALSVQLLSKGQKEKAIPLLRQALNKDPEYVRALIVMGQTLLQNGQPAEAIAFLERAISKL 457

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P EVEG DLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEE KSKAHYYDG
Sbjct: 458 FLSGHPTEVEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYYDG 517

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYLQ AAAYNPAYKEYLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 518 LVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of MS021906 vs. ExPASy TrEMBL
Match: A0A6J1ICK0 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP KDAPVG      TN+PGK PLDTPTKWK+I VEKLSPKELL
Sbjct: 338 IQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWKKIYVEKLSPKELL 397

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKE+AIPLLRQALNK+PEYVRALIVMGQTLLQ+GQP EA  +LERAISKL
Sbjct: 398 ALSVQLLSKGQKEKAIPLLRQALNKDPEYVRALIVMGQTLLQNGQPAEAIAFLERAISKL 457

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P E EG DLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEE KSKAHYYDG
Sbjct: 458 FLSGHPTEAEGEDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEPKSKAHYYDG 517

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYLQ AAAYNPAYKEYLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 518 LVLLASALYNEGRKAEATKYLQSAAAYNPAYKEYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of MS021906 vs. ExPASy TrEMBL
Match: A0A1S3B4X9 (ALBINO3-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485819 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 209/237 (88.19%), Postives = 219/237 (92.41%), Query Frame = 0


Query: 1   LQQLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELL 60
           +QQLTLQHPAVRSKLGLP +DAPVG      TNNPGK PL+TPTKWK++SVEKLSPKELL
Sbjct: 338 IQQLTLQHPAVRSKLGLPSRDAPVGNANVRETNNPGKIPLETPTKWKKVSVEKLSPKELL 397

Query: 61  ALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKL 120
           ALSVQLLSKGQKERAIPLLRQALNK+PEYVRAL+VMGQTLLQ+ QP EAT YLERAISKL
Sbjct: 398 ALSVQLLSKGQKERAIPLLRQALNKDPEYVRALVVMGQTLLQNAQPAEATVYLERAISKL 457

Query: 121 FLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDG 180
           FLSG P EVEGVDLLILASQWAGVASIRQGKMVEGIAHLER+ANMKEPEE KSKAHYYDG
Sbjct: 458 FLSGHPTEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERVANMKEPEEPKSKAHYYDG 517

Query: 181 LVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LVLLASALYNEGRKAEATKYL+ A AYNPAYK YLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 518 LVLLASALYNEGRKAEATKYLKSAVAYNPAYKVYLDQCEDDNDKLVGDLVSSRRGDY 574

[Close]

BLAST of MS021906 vs. ExPASy TrEMBL
Match: A0A5D3DG53 (ALBINO3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001350 PE=3 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.3e-109
Identity = 208/235 (88.51%), Postives = 217/235 (92.34%), Query Frame = 0


Query: 3   QLTLQHPAVRSKLGLPLKDAPVG------TNNPGKAPLDTPTKWKRISVEKLSPKELLAL 62
           QLTLQHPAVRSKLGLP +DAPVG      TNNPGK PL+TPTKWK++SVEKLSPKELLAL
Sbjct: 24  QLTLQHPAVRSKLGLPSRDAPVGNANVRETNNPGKIPLETPTKWKKVSVEKLSPKELLAL 83

Query: 63  SVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLFL 122
           SVQLLSKGQKERAIPLLRQALNK+PEYVRAL+VMGQTLLQ+ QP EAT YLERAISKLFL
Sbjct: 84  SVQLLSKGQKERAIPLLRQALNKDPEYVRALVVMGQTLLQNAQPAEATVYLERAISKLFL 143

Query: 123 SGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGLV 182
           SG P EVEGVDLLILASQWAGVASIRQGKMVEGIAHLER+ANMKEPEE KSKAHYYDGLV
Sbjct: 144 SGHPTEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERVANMKEPEEPKSKAHYYDGLV 203

Query: 183 LLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           LLASALYNEGRKAEATKYL+ A AYNPAYK YLDQCEDDNDKLV DLVSSRRGDY
Sbjct: 204 LLASALYNEGRKAEATKYLKSAVAYNPAYKVYLDQCEDDNDKLVGDLVSSRRGDY 258

[Close]

BLAST of MS021906 vs. TAIR 10
Match: AT1G65080.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain )

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59
Identity = 125/236 (52.97%), Postives = 169/236 (71.61%), Query Frame = 0


Query: 2   QQLTLQHPAVRSKLGLPLKDAPVGTNNPGKAP------LDTPTKWKRISVEKLSPKELLA 61
           QQL+L+HP V +KLGL  + A  G  +  +        +D+ +K + +S++ L+P+ELL+
Sbjct: 292 QQLSLKHPTVGAKLGLLSQGATPGMGHSMEISESVIKYVDSDSKEQTLSLQTLTPEELLS 351

Query: 62  LSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISKLF 121
           LSVQ+LSKG KE +I LLR AL K+P YVR L++MGQ LLQ  Q  EATEYLE AISKL 
Sbjct: 352 LSVQVLSKGDKETSIQLLRLALEKDPGYVRGLVLMGQALLQKTQLSEATEYLELAISKL- 411

Query: 122 LSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYDGL 181
           L   P + E V+LL+LASQWAG A ++QGK+  GI HLER+A ++EP + KSK HY++ L
Sbjct: 412 LDEDPSDAEDVELLMLASQWAGAAYVQQGKLKSGIIHLERVAKLREPGDPKSKEHYFEAL 471

Query: 182 VLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDNDKLVSDLVSSRRGDY 232
           +LL+SALY EG+  EA K L++   +NPAYK  L+QCED+N+ LVSDLVS R+  +
Sbjct: 472 LLLSSALYKEGQSDEAAKILRVVVDHNPAYKPLLEQCEDENE-LVSDLVSRRKDHF 525

[Close]

BLAST of MS021906 vs. TAIR 10
Match: AT3G44370.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain )

HSP 1 Score: 224.9 bits (572), Expect = 6.5e-59
Identity = 125/223 (56.05%), Postives = 160/223 (71.75%), Query Frame = 0


Query: 2   QQLTLQHPAVRSKLGLPLKDA-------PVGTN-NPGKAPLDTPTKWKRISVEKLSPKEL 61
           QQ  L HP V +KLGL   D+       P+ TN N GK   D  +K + ISV  L+PKEL
Sbjct: 331 QQSILNHPVVSAKLGLQANDSVQKEAGNPILTNINEGKL-TDPSSKGRLISVHNLTPKEL 390

Query: 62  LALSVQLLSKGQKERAIPLLRQALNKEPEYVRALIVMGQTLLQSGQPEEATEYLERAISK 121
           +ALS + LS G K+++IPLLR AL K+PEY++A+I++GQ L Q  Q  EA + LE+A SK
Sbjct: 391 VALSAKYLSGGHKDKSIPLLRLALEKDPEYLQAMIILGQALYQKDQFAEAAKCLEQAASK 450

Query: 122 LFLSGRPMEVEGVDLLILASQWAGVASIRQGKMVEGIAHLERIANMKEPEEAKSKAHYYD 181
           L L   P EVE VDLLI+ASQWAGV++IRQGK  EGI HLER+ANMKEP++ KSKAHY D
Sbjct: 451 L-LDTSPTEVEEVDLLIVASQWAGVSNIRQGKTSEGITHLERVANMKEPDDPKSKAHYLD 510

Query: 182 GLVLLASALYNEGRKAEATKYLQLAAAYNPAYKEYLDQCEDDN 217
            LVL +SA++NEGR+ EA KYL+   AY+P++ E L QCE+D+
Sbjct: 511 ALVLYSSAIFNEGRREEAAKYLRRVVAYDPSFSELLKQCEEDD 551

The following BLAST results are available for this feature:

BLAST of MS021906 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144503.1	2.5e-121	98.70	ALBINO3-like protein 2, chloroplastic [Momordica charantia]	[more]
XP_038890165.1	2.3e-111	90.72	ALBINO3-like protein 2, chloroplastic [Benincasa hispida]	[more]
XP_023546234.1	2.6e-110	89.87	ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022933144.1	7.5e-110	89.45	ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_022973910.1	2.2e-109	89.03	ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of MS021906 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L718	4.1e-58	52.97	ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 ...	[more]
Q0WUC5	9.1e-58	56.05	ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 ...	[more]

BLAST of MS021906 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTF9	1.2e-121	98.70	ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1EYX9	3.7e-110	89.45	ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1ICK0	1.1e-109	89.03	ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3B4X9	1.1e-109	88.19	ALBINO3-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485819 PE...	[more]
A0A5D3DG53	5.3e-109	88.51	ALBINO3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]

BLAST of MS021906 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65080.1	2.9e-59	52.97	Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain	[more]
AT3G44370.1	6.5e-59	56.05	Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 84..117 e-value: 66.0 score: 7.8 coord: 172..205 e-value: 16.0 score: 13.1 coord: 50..83 e-value: 21.0 score: 12.2
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 174..204 e-value: 0.093 score: 13.0
None	No IPR available	PFAM	PF14559	TPR_19	coord: 60..110 e-value: 1.2E-7 score: 32.1
None	No IPR available	PANTHER	PTHR12428:SF46	ALBINO3-LIKE PROTEIN 2, CHLOROPLASTIC	coord: 1..221
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 51..225 e-value: 5.9E-18 score: 67.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 51..210
IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	PANTHER	PTHR12428	OXA1	coord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021906.1	MS021906.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0032977	membrane insertase activity
molecular_function	GO:0005515	protein binding