MS021861 (gene) Bitter gourd (TR) v1

Overview
NameMS021861
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR50-like
Locationscaffold1: 821769 .. 822071 (+)
RNA-Seq ExpressionMS021861
SyntenyMS021861
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATGAGAAAGTCGACGAAAGCGCCACAGACGGCGCCGGCGGTGCTGAAGCAGATCCTGAAGCGGTGCTCCAGCCTGGGGAGGAAGCAGCAGCACTACGACGACGTCCCCAAAGGCCATTTCGTGGTGTACGTTGGCCAAAACCGAACCAGATACATTGTCCCCATCACATTCCTAAACTACCCTCAGTTCCAAATCTTACTCCAGCAGGCCGCTGACGAGTTCGGCTTCGACCACGACATGGGCCTCACCATTCCCTGCGACGACCACTTCTTTCAGTCCCTCACCTCATCCCTCACG

mRNA sequence

ATGGGGATGAGAAAGTCGACGAAAGCGCCACAGACGGCGCCGGCGGTGCTGAAGCAGATCCTGAAGCGGTGCTCCAGCCTGGGGAGGAAGCAGCAGCACTACGACGACGTCCCCAAAGGCCATTTCGTGGTGTACGTTGGCCAAAACCGAACCAGATACATTGTCCCCATCACATTCCTAAACTACCCTCAGTTCCAAATCTTACTCCAGCAGGCCGCTGACGAGTTCGGCTTCGACCACGACATGGGCCTCACCATTCCCTGCGACGACCACTTCTTTCAGTCCCTCACCTCATCCCTCACG

Coding sequence (CDS)

ATGGGGATGAGAAAGTCGACGAAAGCGCCACAGACGGCGCCGGCGGTGCTGAAGCAGATCCTGAAGCGGTGCTCCAGCCTGGGGAGGAAGCAGCAGCACTACGACGACGTCCCCAAAGGCCATTTCGTGGTGTACGTTGGCCAAAACCGAACCAGATACATTGTCCCCATCACATTCCTAAACTACCCTCAGTTCCAAATCTTACTCCAGCAGGCCGCTGACGAGTTCGGCTTCGACCACGACATGGGCCTCACCATTCCCTGCGACGACCACTTCTTTCAGTCCCTCACCTCATCCCTCACG

Protein sequence

MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT
Homology
[Close]
BLAST of MS021861 vs. NCBI nr
Match: XP_022139868.1 (auxin-responsive protein SAUR50-like [Momordica charantia])

HSP 1 Score: 210.7 bits (535), Expect = 5.9e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFL 60
           MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRY+VPITFL
Sbjct: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYVVPITFL 60

Query: 61  NYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT 102
           NYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT
Sbjct: 61  NYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT 101

[Close]
BLAST of MS021861 vs. NCBI nr
Match: KAG6608586.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.1 bits (440), Expect = 6.1e-40
Identity = 86/106 (81.13%), Postives = 96/106 (90.57%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYI 60
           MG+RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+I
Sbjct: 1   MGIRKSTKMPQT--AVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHI 60

Query: 61  VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           VPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQSLTS+L
Sbjct: 61  VPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL 104

[Close]
BLAST of MS021861 vs. NCBI nr
Match: XP_022941161.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023525369.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.8 bits (434), Expect = 3.0e-39
Identity = 85/106 (80.19%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYI 60
           M +RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+I
Sbjct: 1   MAIRKSTKMPQT--AVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHI 60

Query: 61  VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           VPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQSLTS+L
Sbjct: 61  VPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL 104

[Close]
BLAST of MS021861 vs. NCBI nr
Match: XP_022937029.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >KAG6591277.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36
Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 0 

Query: 7   TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPIT 66
           TK PQT  AVLKQ++KRCSS+GRKQ QHYD       DVPKGHFVVYVG+NR+RYIVPIT
Sbjct: 4   TKMPQT--AVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPIT 63

Query: 67  FLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           FLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS+L
Sbjct: 64  FLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL 103

[Close]
BLAST of MS021861 vs. NCBI nr
Match: XP_023535895.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 9.2e-36
Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0 

Query: 7   TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPIT 66
           TK PQT  AVLKQ++KRCSS+GRKQ  HYD       DVPKGHFVVYVG+NR+RYIVPIT
Sbjct: 4   TKMPQT--AVLKQMIKRCSSMGRKQHHHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPIT 63

Query: 67  FLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           FLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS+L
Sbjct: 64  FLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL 103

[Close]
BLAST of MS021861 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-30
Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 0 

Query: 3   MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-QHYD------DVPKGHFVVYVGQNRTRYIV 62
           M+K++K  QT  A+LKQILKRCSSLG+K    YD      DVPKGHF VYVG+NR+RYIV
Sbjct: 4   MKKTSKLTQT--AMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIV 63

Query: 63  PITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           PI+FL +P+FQ LLQ+A +EFGFDHDMGLTIPCD+  FQ+LTS +
Sbjct: 64  PISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]
BLAST of MS021861 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-26
Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQ----HYD-------DVPKGHFVVYVGQN 60
           M +++S+KA  +  A +KQI+KRCSSL + +     +Y+       DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RTRYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS 99
           R+RYIVPI++L++ +FQ LL+ A +EFGFDHDMGLTIPCD+ FF+SL S
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLIS 109

[Close]
BLAST of MS021861 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.0e-22
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 0 

Query: 3   MRKSTKAPQTAPAVLKQILKRCSSLGRKQQHY---DDVPKGHFVVYVGQNRTRYIVPITF 62
           +RKS K  QT    +K+I+K+CSS G+        +DVPKGHFVVYVG+ R RYIVPI+ 
Sbjct: 4   IRKSHK--QTQALAIKKIIKKCSSFGKNNDDSGLPNDVPKGHFVVYVGERRNRYIVPISC 63

Query: 63  LNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           L++P FQ LLQ++ +EFGF+HDMG+ IPC +  F S  S +
Sbjct: 64  LDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]
BLAST of MS021861 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.4e-16
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0 

Query: 17  LKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEF 76
           L  I K  S+         D PKG+  VYVG+N  R+++P++ LN P FQ LL QA +EF
Sbjct: 5   LPGIRKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEF 64

Query: 77  GFDHDM-GLTIPCDDHFFQSLTSSLT 102
           G+DH M GLTIPC +  FQ +TS L+
Sbjct: 65  GYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]
BLAST of MS021861 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 29  RKQQHYDDVPKGHFVVYVGQNRTRYIVPITFLNYPQFQILLQQAADEFGFDHDM-GLTIP 88
           RK     D PKG+  VYVG+   R+++P+++LN P FQ LL QA +EFG+DH M GLTIP
Sbjct: 9   RKASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIP 68

Query: 89  CDDHFFQSLTSSL 101
           C +  FQ +TS L
Sbjct: 69  CSEDVFQCITSCL 81

[Close]
BLAST of MS021861 vs. ExPASy TrEMBL
Match: A0A6J1CGP8 (auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111010673 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYIVPITFL 60
           MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRY+VPITFL
Sbjct: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYDDVPKGHFVVYVGQNRTRYVVPITFL 60

Query: 61  NYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT 102
           NYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT
Sbjct: 61  NYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSLT 101

[Close]
BLAST of MS021861 vs. ExPASy TrEMBL
Match: A0A6J1J0M7 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 85/106 (80.19%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYI 60
           M +RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+I
Sbjct: 1   MAIRKSTKMPQT--AVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHI 60

Query: 61  VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           VPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQSLTS+L
Sbjct: 61  VPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL 104

[Close]
BLAST of MS021861 vs. ExPASy TrEMBL
Match: A0A6J1FKC5 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111446542 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 85/106 (80.19%), Postives = 95/106 (89.62%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYI 60
           M +RKSTK PQT  AVLKQ+LKRCSSLG+KQQ YD      DVPKGHFVVYVG+NR+R+I
Sbjct: 1   MAIRKSTKMPQT--AVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHI 60

Query: 61  VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           VPIT+LN+PQFQILLQQAADEFGFDHDMGLTIPCD+HFFQSLTS+L
Sbjct: 61  VPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL 104

[Close]
BLAST of MS021861 vs. ExPASy TrEMBL
Match: A0A6J1IE85 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 0 

Query: 7   TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPIT 66
           TK PQT  AVLKQ++KRCSS+GRKQ QHYD       DVPKGHFVVYVG+NR+RYIVPIT
Sbjct: 4   TKMPQT--AVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPIT 63

Query: 67  FLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           FLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS+L
Sbjct: 64  FLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL 103

[Close]
BLAST of MS021861 vs. ExPASy TrEMBL
Match: A0A6J1F9Z6 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111443449 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 0 

Query: 7   TKAPQTAPAVLKQILKRCSSLGRKQ-QHYD-------DVPKGHFVVYVGQNRTRYIVPIT 66
           TK PQT  AVLKQ++KRCSS+GRKQ QHYD       DVPKGHFVVYVG+NR+RYIVPIT
Sbjct: 4   TKMPQT--AVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPIT 63

Query: 67  FLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           FLN+PQFQILLQQAADEFGFDHDMGLTIPCD+H FQSLTS+L
Sbjct: 64  FLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL 103

[Close]
BLAST of MS021861 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.8 bits (338), Expect = 3.8e-32
Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD---------DVPKGHFVVYVGQNRT 60
           M M+K+ K  QT  A++KQILKRCSSLG+KQ +           +VPKGHFVVYVG+NR 
Sbjct: 1   MAMKKANKLTQT--AMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRV 60

Query: 61  RYIVPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           RY+VPI+FL  P+FQ+LLQQA +EFGFDHDMGLTIPC++  F+SLTS L
Sbjct: 61  RYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSML 107

[Close]
BLAST of MS021861 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-31
Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 0 

Query: 3   MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-QHYD------DVPKGHFVVYVGQNRTRYIV 62
           M+K++K  QT  A+LKQILKRCSSLG+K    YD      DVPKGHF VYVG+NR+RYIV
Sbjct: 4   MKKTSKLTQT--AMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIV 63

Query: 63  PITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           PI+FL +P+FQ LLQ+A +EFGFDHDMGLTIPCD+  FQ+LTS +
Sbjct: 64  PISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]
BLAST of MS021861 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-30
Identity = 62/101 (61.39%), Postives = 82/101 (81.19%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQ---HYDDVPKGHFVVYVGQNRTRYIVPI 60
           M ++KS KA  +  A LKQILKRCSSLG+K Q   +++DVPKGHF VYVGQ+R+RY+VPI
Sbjct: 1   MAIKKSNKAALSQAASLKQILKRCSSLGKKNQGNCYFNDVPKGHFPVYVGQHRSRYVVPI 60

Query: 61  TFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTS 99
           ++L++ +FQ LLQ A +EFGF+H+MGLTIPCD+  F+SL S
Sbjct: 61  SWLDHHEFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLIS 101

[Close]
BLAST of MS021861 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.0e-29
Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0 

Query: 3   MRKSTKAPQTAPAVLKQILKRCSSLGRKQ-----QHYD---DVPKGHFVVYVGQNRTRYI 62
           ++KSTK  QT  A+L+QILKRCSSLG+K      +  D   DVPKGHF VYVG NR+RYI
Sbjct: 4   LKKSTKLAQT--AMLRQILKRCSSLGKKNGGGGYEEVDLPLDVPKGHFPVYVGHNRSRYI 63

Query: 63  VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           VPI+FL    FQ LL++A +EFGFDHDMGLTIPCD+ FFQ LTS +
Sbjct: 64  VPISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTSMI 107

[Close]
BLAST of MS021861 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 0 

Query: 1   MGMRKSTKAPQTAPAVLKQILKRCSSLGRKQQHYD------DVPKGHFVVYVGQNRTRYI 60
           M +++S+K  QT  A+LKQILKRCSSL  K Q YD      DVPKGHF VYVG+ R+RYI
Sbjct: 1   MAVKRSSKLTQT--AMLKQILKRCSSLA-KNQCYDEDGLPVDVPKGHFPVYVGEKRSRYI 60

Query: 61  VPITFLNYPQFQILLQQAADEFGFDHDMGLTIPCDDHFFQSLTSSL 101
           VPI+FL +P+F+ LLQQA +EFGF+HDMGLTIPC++  F+SLTS +
Sbjct: 61  VPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

The following BLAST results are available for this feature:
BLAST of MS021861 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139868.15.9e-5199.01auxin-responsive protein SAUR50-like [Momordica charantia][more]
KAG6608586.16.1e-4081.13Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022941161.13.0e-3980.19auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-... [more]
XP_022937029.12.4e-3680.39auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-... [more]
XP_023535895.19.2e-3679.41auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo][more]
BLAST of MS021861 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O656951.6e-3065.71Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
Q9SL454.0e-2655.05Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1... [more]
P0DKL16.0e-2252.48Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1[more]
P322956.4e-1647.67Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ... [more]
P330811.1e-1552.05Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1[more]
BLAST of MS021861 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CGP82.9e-5199.01auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1J0M71.5e-3980.19auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219... [more]
A0A6J1FKC51.5e-3980.19auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114465... [more]
A0A6J1IE851.2e-3680.39auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445... [more]
A0A6J1F9Z61.2e-3680.39auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114434... [more]
BLAST of MS021861 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G75580.13.8e-3262.39SAUR-like auxin-responsive protein family [more]
AT4G34760.11.1e-3165.71SAUR-like auxin-responsive protein family [more]
AT4G36110.13.6e-3061.39SAUR-like auxin-responsive protein family [more]
AT2G16580.11.0e-2963.21SAUR-like auxin-responsive protein family [more]
AT2G21220.11.4e-2962.26SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 23..100
e-value: 7.3E-27
score: 93.4
NoneNo IPR availablePANTHERPTHR31374:SF243AUXIN-INDUCED PROTEIN 15A-LIKEcoord: 11..100
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 11..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS021861.1MS021861.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin