MS021757 (gene) Bitter gourd (TR) v1

Overview


Name	MS021757
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AT-hook motif nuclear-localized protein
Location	scaffold1: 205597 .. 206202 (+)
RNA-Seq Expression	MS021757
Synteny	MS021757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGACGGATCAACTGCACACGCCATCCTCCTCCCTTCCGCTTCCGCTTCGCCTTCACCAATTTAACAACTCCAACTCCAACTCCAAATTAGACTCCCCTCAAAACGCGCCCCCTTGTAATTCTTCCCTCATCCGCCGCCCTCGGGGCCGTCCTCCGGGCTCCAAGAACAAGCCCAAGCCTCCCATCATCGTCACCCGCGACAGCCCCAACGTCCTCGGCTCCCACGTTCTCGAGGTCTCCGCCGCCGCCGACATCCTCGACAGCCTCTCCAACTACGCCCGCCGGCGGGGCAGAGGCCTCTCCATCCTCTCCGGCACCGGCACCGTCGCCAACGTCACCCTGCGCCAGCCTGCCGCTTGTGCCTCCCCGCCCGGAAGCGTCCTCACGCTTCACGGGAGGTTCGAGATTCTGTCGCTGACGGGGACGGTGCTTCCTCCGCCGGCCCCACCGCAAGCGGGCGGGCTGTGCATATTCCTGGCGGGCGCCCAGGGGCAGGTGGTGGGAGGCACCGTGGTGGGGCCCTTGGTGGCATCGGGACCAGTGATTTTGATGGCCGCGTCGTTCTCGAACGCGGTGTTTGAGCGGTTGCCTGTGGAGGAGGAAGAT

mRNA sequence

ACGACGGATCAACTGCACACGCCATCCTCCTCCCTTCCGCTTCCGCTTCGCCTTCACCAATTTAACAACTCCAACTCCAACTCCAAATTAGACTCCCCTCAAAACGCGCCCCCTTGTAATTCTTCCCTCATCCGCCGCCCTCGGGGCCGTCCTCCGGGCTCCAAGAACAAGCCCAAGCCTCCCATCATCGTCACCCGCGACAGCCCCAACGTCCTCGGCTCCCACGTTCTCGAGGTCTCCGCCGCCGCCGACATCCTCGACAGCCTCTCCAACTACGCCCGCCGGCGGGGCAGAGGCCTCTCCATCCTCTCCGGCACCGGCACCGTCGCCAACGTCACCCTGCGCCAGCCTGCCGCTTGTGCCTCCCCGCCCGGAAGCGTCCTCACGCTTCACGGGAGGTTCGAGATTCTGTCGCTGACGGGGACGGTGCTTCCTCCGCCGGCCCCACCGCAAGCGGGCGGGCTGTGCATATTCCTGGCGGGCGCCCAGGGGCAGGTGGTGGGAGGCACCGTGGTGGGGCCCTTGGTGGCATCGGGACCAGTGATTTTGATGGCCGCGTCGTTCTCGAACGCGGTGTTTGAGCGGTTGCCTGTGGAGGAGGAAGAT

Coding sequence (CDS)

ACGACGGATCAACTGCACACGCCATCCTCCTCCCTTCCGCTTCCGCTTCGCCTTCACCAATTTAACAACTCCAACTCCAACTCCAAATTAGACTCCCCTCAAAACGCGCCCCCTTGTAATTCTTCCCTCATCCGCCGCCCTCGGGGCCGTCCTCCGGGCTCCAAGAACAAGCCCAAGCCTCCCATCATCGTCACCCGCGACAGCCCCAACGTCCTCGGCTCCCACGTTCTCGAGGTCTCCGCCGCCGCCGACATCCTCGACAGCCTCTCCAACTACGCCCGCCGGCGGGGCAGAGGCCTCTCCATCCTCTCCGGCACCGGCACCGTCGCCAACGTCACCCTGCGCCAGCCTGCCGCTTGTGCCTCCCCGCCCGGAAGCGTCCTCACGCTTCACGGGAGGTTCGAGATTCTGTCGCTGACGGGGACGGTGCTTCCTCCGCCGGCCCCACCGCAAGCGGGCGGGCTGTGCATATTCCTGGCGGGCGCCCAGGGGCAGGTGGTGGGAGGCACCGTGGTGGGGCCCTTGGTGGCATCGGGACCAGTGATTTTGATGGCCGCGTCGTTCTCGAACGCGGTGTTTGAGCGGTTGCCTGTGGAGGAGGAAGAT

Protein sequence

TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED

Homology

[Close]

BLAST of MS021757 vs. NCBI nr
Match: XP_022144626.1 (AT-hook motif nuclear-localized protein 29-like [Momordica charantia] >XP_022144702.1 AT-hook motif nuclear-localized protein 29-like [Momordica charantia])

HSP 1 Score: 392.9 bits (1008), Expect = 1.7e-105
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKP 60
           TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKP
Sbjct: 27  TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKP 86

Query: 61  PIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAAC 120
           PIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAAC
Sbjct: 87  PIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAAC 146

Query: 121 ASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGP 180
           ASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGP
Sbjct: 147 ASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGP 206

Query: 181 VILMAASFSNAVFERLPVEEED 203
           VILMAASFSNAVFERLPVEEED
Sbjct: 207 VILMAASFSNAVFERLPVEEED 228

[Close]

BLAST of MS021757 vs. NCBI nr
Match: XP_022975382.1 (AT-hook motif nuclear-localized protein 29 [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 160/205 (78.05%), Postives = 174/205 (84.88%), Query Frame = 0


Query: 5   LHTP-SSSLPLPLRLHQFNNSN------SNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNK 64
           L TP SSS+P P   H FN+SN       N+  ++  N      + +RRPRGRPPGSKNK
Sbjct: 33  LDTPSSSSIPFP-HPHLFNHSNHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNK 92

Query: 65  PKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP 124
           PKPPII+TRDSPNVLGSHVLEVSA+ADI+DSLSNYARRRGRGLSIL GTGTVANVTLRQP
Sbjct: 93  PKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQP 152

Query: 125 AACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVA 184
           +  ASP  SV+TLHGRFEILSLTGTVLPPPAPPQAGGL IFLAGAQGQVVGGTVVGPLVA
Sbjct: 153 S--ASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVA 212

Query: 185 SGPVILMAASFSNAVFERLPVEEED 203
           SGPVILMAASFSNAVFERLP+EEE+
Sbjct: 213 SGPVILMAASFSNAVFERLPLEEEE 234

[Close]

BLAST of MS021757 vs. NCBI nr
Match: XP_022935840.1 (AT-hook motif nuclear-localized protein 29-like [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 6.4e-73
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0


Query: 5   LHTP-SSSLPLPLRLHQFNNSN------SNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNK 64
           L TP SSS+P P   H FN+SN       N+  ++  N      + +RRPRGRPPGSKNK
Sbjct: 33  LDTPSSSSIPFP-HPHLFNHSNHSDDGDDNNDTNNNTNPSQNQHASLRRPRGRPPGSKNK 92

Query: 65  PKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP 124
           PKPPII+TRDSPNVLGSHVLEVSA+ADI+DSLSNYARRRGRGLSIL GTGTVANVTLR P
Sbjct: 93  PKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRHP 152

Query: 125 AACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVA 184
           +  ASP  SV+TLHGRFEILSLTGTVLPPPAPPQAGGL IFLAGAQGQVVGGTVVGPLVA
Sbjct: 153 S--ASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVA 212

Query: 185 SGPVILMAASFSNAVFERLPVEEED 203
           SGPVILMAASFSNAVFERLP+EEE+
Sbjct: 213 SGPVILMAASFSNAVFERLPLEEEE 234

[Close]

BLAST of MS021757 vs. NCBI nr
Match: KAG6591192.1 (AT-hook motif nuclear-localized protein 29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.6 bits (719), Expect = 5.5e-72
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0


Query: 5   LHTP-SSSLPLPLRLHQFNNSN----SNSKLDSPQNAPPCNS--SLIRRPRGRPPGSKNK 64
           L TP SSS+P P   H FN+SN     +   D+  N  P  +  + +RRPRGRPPGSKNK
Sbjct: 33  LDTPSSSSIPFP-HPHLFNHSNHSDDGDDNNDTNDNTNPSQNQHASLRRPRGRPPGSKNK 92

Query: 65  PKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP 124
           PKPPII+TRDSPNVLGSHVLEVSA+ADI+DSLSNYARRRGRGLSIL GTGTVANVTLR P
Sbjct: 93  PKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRHP 152

Query: 125 AACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVA 184
           +  ASP  SV+TLHGRFEILSLTGTVLPPPAPPQAGGL IFLAGAQGQVVGGTVVGPLVA
Sbjct: 153 S--ASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVA 212

Query: 185 SGPVILMAASFSNAVFERLPVEEED 203
           SG VILMAASFSNAVFERLP+EEE+
Sbjct: 213 SGQVILMAASFSNAVFERLPLEEEE 234

[Close]

BLAST of MS021757 vs. NCBI nr
Match: XP_023515056.1 (AT-hook motif nuclear-localized protein 25-like [Cucurbita pepo subsp. pepo] >XP_023515058.1 AT-hook motif nuclear-localized protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 7.1e-72
Identity = 157/205 (76.59%), Postives = 172/205 (83.90%), Query Frame = 0


Query: 5   LHTP-SSSLPLPLRLHQFNNSN------SNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNK 64
           L TP SSS+P P   H FN+SN       N+  ++  N      + +RRPRGRPPGSKNK
Sbjct: 35  LDTPSSSSIPFP-HPHLFNHSNHSDDGDDNNHTNNNTNPSQNQHASLRRPRGRPPGSKNK 94

Query: 65  PKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP 124
           PKPP+I+TRDSPNVLGSHVLEVSA+ADI+DSLSNYARRRGRGLSIL GTGTVANVTLR P
Sbjct: 95  PKPPVILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRHP 154

Query: 125 AACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVA 184
           +  ASP  +V+TLHGRFEILSLTGTVLPPPAPPQAGGL IFLAGAQGQVVGGTVVGPLVA
Sbjct: 155 S--ASPAATVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVA 214

Query: 185 SGPVILMAASFSNAVFERLPVEEED 203
           SG VILMAASFSNAVFERLPVEEE+
Sbjct: 215 SGTVILMAASFSNAVFERLPVEEEE 236

[Close]

BLAST of MS021757 vs. ExPASy Swiss-Prot
Match: Q9C9K7 (AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana OX=3702 GN=AHL29 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-65
Identity = 137/203 (67.49%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 4   QLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKPPII 63
           QLH      P P    Q ++  S+S  D P + P  + S  +RPRGRPPGSKNKPKPP+I
Sbjct: 32  QLHPLPQPQPQPQPQQQNSDDESDSNKD-PGSDPVTSGSTGKRPRGRPPGSKNKPKPPVI 91

Query: 64  VTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAACAS- 123
           VTRDSPNVL SHVLEVS+ ADI++S++ YARRRGRG+SILSG GTVANV+LRQPA  A+ 
Sbjct: 92  VTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAH 151

Query: 124 ----PPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVAS 183
                 G V+ LHGRFEILSLTGTVLPPPAPP +GGL IFL+G QGQV+GG VV PLVAS
Sbjct: 152 GANGGTGGVVALHGRFEILSLTGTVLPPPAPPGSGGLSIFLSGVQGQVIGGNVVAPLVAS 211

Query: 184 GPVILMAASFSNAVFERLPVEEE 202
           GPVILMAASFSNA FERLP+E+E
Sbjct: 212 GPVILMAASFSNATFERLPLEDE 233

[Close]

BLAST of MS021757 vs. ExPASy Swiss-Prot
Match: Q9S7C9 (AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana OX=3702 GN=AHL27 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.4e-62
Identity = 131/189 (69.31%), Postives = 148/189 (78.31%), Query Frame = 0


Query: 19  HQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLE 78
           H   + +   + DS  N    +S+  +RPRGRPPGSKNK KPPIIVTRDSPN L SHVLE
Sbjct: 62  HSNKDHHQQGRPDSDPNT--SSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALRSHVLE 121

Query: 79  VSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP-----AACASPPGSVLTLHGR 138
           VS  ADI++S+S YARRRGRG+S+L G GTV+NVTLRQP         S  G V+TLHGR
Sbjct: 122 VSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGR 181

Query: 139 FEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVF 198
           FEILSLTGTVLPPPAPP AGGL IFLAG QGQVVGG+VV PL+AS PVILMAASFSNAVF
Sbjct: 182 FEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASFSNAVF 241

Query: 199 ERLPVEEED 203
           ERLP+EEE+
Sbjct: 242 ERLPIEEEE 248

[Close]

BLAST of MS021757 vs. ExPASy Swiss-Prot
Match: Q6DBQ1 (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AHL25 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.2e-59
Identity = 117/168 (69.64%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 35  NAPPCNSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYAR 94
           +A    SS  RRPRGRP GSKNKPKPP I+TRDSPNVL SHVLEV++ +DI +++S YA 
Sbjct: 53  SATASGSSSGRRPRGRPAGSKNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYAT 112

Query: 95  RRGRGLSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGG 154
           RRG G+ I+SGTG V NVT+RQPAA A   G V+TLHGRF+ILSLTGT LPPPAPP AGG
Sbjct: 113 RRGCGVCIISGTGAVTNVTIRQPAAPAG--GGVITLHGRFDILSLTGTALPPPAPPGAGG 172

Query: 155 LCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED 203
           L ++LAG QGQVVGG V G L+ASGPV+LMAASF+NAV++RLP+EEE+
Sbjct: 173 LTVYLAGGQGQVVGGNVAGSLIASGPVVLMAASFANAVYDRLPIEEEE 218

[Close]

BLAST of MS021757 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.3e-56
Identity = 107/163 (65.64%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 40  NSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRG 99
           ++ + RRPRGRP GSKNKPKPPII+TRDS N L SHV+EV+   D+++S++ +ARRR RG
Sbjct: 84  DNHITRRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRG 143

Query: 100 LSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFL 159
           + +LSG G V NVT+RQPA+      SV+ LHGRFEILSL+G+ LPPPAPP A GL I+L
Sbjct: 144 ICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYL 203

Query: 160 AGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED 203
           AG QGQVVGG+VVGPL+ASGPV++MAASF NA +ERLP+EE+D
Sbjct: 204 AGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDD 246

[Close]

BLAST of MS021757 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.4e-56
Identity = 106/160 (66.25%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 43  LIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSI 102
           + RRPRGRP GSKNKPK PII+TRDS N L +HV+E+    DI+D ++ +ARRR RG+ +
Sbjct: 116 MTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCV 175

Query: 103 LSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGA 162
           +SGTG+V NVT+RQP    SPPGSV++LHGRFEILSL+G+ LPPPAPP A GL ++LAG 
Sbjct: 176 MSGTGSVTNVTIRQP---GSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGG 235

Query: 163 QGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED 203
           QGQVVGG+VVGPL+ SGPV++MAASFSNA +ERLP+EE++
Sbjct: 236 QGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDE 272

[Close]

BLAST of MS021757 vs. ExPASy TrEMBL
Match: A0A6J1CUF1 (AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111014237 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.1e-106
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKP 60
           TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKP
Sbjct: 27  TTDQLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKP 86

Query: 61  PIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAAC 120
           PIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAAC
Sbjct: 87  PIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAAC 146

Query: 121 ASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGP 180
           ASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGP
Sbjct: 147 ASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGP 206

Query: 181 VILMAASFSNAVFERLPVEEED 203
           VILMAASFSNAVFERLPVEEED
Sbjct: 207 VILMAASFSNAVFERLPVEEED 228

[Close]

BLAST of MS021757 vs. ExPASy TrEMBL
Match: A0A6J1ICX1 (AT-hook motif nuclear-localized protein 29 OS=Cucurbita maxima OX=3661 GN=LOC111474650 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.3e-74
Identity = 160/205 (78.05%), Postives = 174/205 (84.88%), Query Frame = 0


Query: 5   LHTP-SSSLPLPLRLHQFNNSN------SNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNK 64
           L TP SSS+P P   H FN+SN       N+  ++  N      + +RRPRGRPPGSKNK
Sbjct: 33  LDTPSSSSIPFP-HPHLFNHSNHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNK 92

Query: 65  PKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP 124
           PKPPII+TRDSPNVLGSHVLEVSA+ADI+DSLSNYARRRGRGLSIL GTGTVANVTLRQP
Sbjct: 93  PKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQP 152

Query: 125 AACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVA 184
           +  ASP  SV+TLHGRFEILSLTGTVLPPPAPPQAGGL IFLAGAQGQVVGGTVVGPLVA
Sbjct: 153 S--ASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVA 212

Query: 185 SGPVILMAASFSNAVFERLPVEEED 203
           SGPVILMAASFSNAVFERLP+EEE+
Sbjct: 213 SGPVILMAASFSNAVFERLPLEEEE 234

[Close]

BLAST of MS021757 vs. ExPASy TrEMBL
Match: A0A6J1FBT6 (AT-hook motif nuclear-localized protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111442628 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.1e-73
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0


Query: 5   LHTP-SSSLPLPLRLHQFNNSN------SNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNK 64
           L TP SSS+P P   H FN+SN       N+  ++  N      + +RRPRGRPPGSKNK
Sbjct: 33  LDTPSSSSIPFP-HPHLFNHSNHSDDGDDNNDTNNNTNPSQNQHASLRRPRGRPPGSKNK 92

Query: 65  PKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP 124
           PKPPII+TRDSPNVLGSHVLEVSA+ADI+DSLSNYARRRGRGLSIL GTGTVANVTLR P
Sbjct: 93  PKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRHP 152

Query: 125 AACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVA 184
           +  ASP  SV+TLHGRFEILSLTGTVLPPPAPPQAGGL IFLAGAQGQVVGGTVVGPLVA
Sbjct: 153 S--ASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVA 212

Query: 185 SGPVILMAASFSNAVFERLPVEEED 203
           SGPVILMAASFSNAVFERLP+EEE+
Sbjct: 213 SGPVILMAASFSNAVFERLPLEEEE 234

[Close]

BLAST of MS021757 vs. ExPASy TrEMBL
Match: A0A2P5DIY5 (PPC domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_249720 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.3e-66
Identity = 140/185 (75.68%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 22  NNSNSNSKLDSPQNAPPCN-----SSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHV 81
           N ++S+SK DSP   P        S+  RRPRGRPPGSKNKPKP IIVTRDSPN L SHV
Sbjct: 43  NINSSDSKEDSPDTDPAATATASASTSSRRPRGRPPGSKNKPKPAIIVTRDSPNALRSHV 102

Query: 82  LEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEI 141
           LEVSA AD+L+S+S YARRRGRG+S+LSG GTVANVTLRQP   ASP GSV+TLHGRFEI
Sbjct: 103 LEVSAGADVLESVSTYARRRGRGISVLSGNGTVANVTLRQP---ASPAGSVVTLHGRFEI 162

Query: 142 LSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERL 201
           LSLTGTVLPPPAPP AGGL IFL+G QGQVVGG VVGPLVASGPV+LMAASF+NAVFERL
Sbjct: 163 LSLTGTVLPPPAPPGAGGLSIFLSGGQGQVVGGAVVGPLVASGPVVLMAASFANAVFERL 222

[Close]

BLAST of MS021757 vs. ExPASy TrEMBL
Match: A0A2P5ACL2 (PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345910 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.1e-65
Identity = 138/184 (75.00%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 22  NNSNSNSKLDSPQNAPP----CNSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVL 81
           N ++S+SK DSP  A        S+  RRPRGRPPGSKNKPKPPIIVTR+SPN L SHVL
Sbjct: 45  NINSSDSKEDSPDTATATATGSASTSSRRPRGRPPGSKNKPKPPIIVTRESPNALRSHVL 104

Query: 82  EVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEIL 141
           EV A AD+++S+S YARRRGRG+S+LSG GTVANVTLRQP   ASP GSV+TLHGRFEIL
Sbjct: 105 EVLAGADVVESVSTYARRRGRGISVLSGNGTVANVTLRQP---ASPAGSVVTLHGRFEIL 164

Query: 142 SLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLP 201
           SLTGTVLPPPAPP AGGL IFL+G QGQVVGG VVGPLVASGPV+LMAASF+NAVFERLP
Sbjct: 165 SLTGTVLPPPAPPSAGGLSIFLSGGQGQVVGGAVVGPLVASGPVVLMAASFANAVFERLP 224

[Close]

BLAST of MS021757 vs. TAIR 10
Match: AT1G76500.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-66
Identity = 137/203 (67.49%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 4   QLHTPSSSLPLPLRLHQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKPPII 63
           QLH      P P    Q ++  S+S  D P + P  + S  +RPRGRPPGSKNKPKPP+I
Sbjct: 32  QLHPLPQPQPQPQPQQQNSDDESDSNKD-PGSDPVTSGSTGKRPRGRPPGSKNKPKPPVI 91

Query: 64  VTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQPAACAS- 123
           VTRDSPNVL SHVLEVS+ ADI++S++ YARRRGRG+SILSG GTVANV+LRQPA  A+ 
Sbjct: 92  VTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAH 151

Query: 124 ----PPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVAS 183
                 G V+ LHGRFEILSLTGTVLPPPAPP +GGL IFL+G QGQV+GG VV PLVAS
Sbjct: 152 GANGGTGGVVALHGRFEILSLTGTVLPPPAPPGSGGLSIFLSGVQGQVIGGNVVAPLVAS 211

Query: 184 GPVILMAASFSNAVFERLPVEEE 202
           GPVILMAASFSNA FERLP+E+E
Sbjct: 212 GPVILMAASFSNATFERLPLEDE 233

[Close]

BLAST of MS021757 vs. TAIR 10
Match: AT1G20900.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.7e-63
Identity = 131/189 (69.31%), Postives = 148/189 (78.31%), Query Frame = 0


Query: 19  HQFNNSNSNSKLDSPQNAPPCNSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLE 78
           H   + +   + DS  N    +S+  +RPRGRPPGSKNK KPPIIVTRDSPN L SHVLE
Sbjct: 62  HSNKDHHQQGRPDSDPNT--SSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALRSHVLE 121

Query: 79  VSAAADILDSLSNYARRRGRGLSILSGTGTVANVTLRQP-----AACASPPGSVLTLHGR 138
           VS  ADI++S+S YARRRGRG+S+L G GTV+NVTLRQP         S  G V+TLHGR
Sbjct: 122 VSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGR 181

Query: 139 FEILSLTGTVLPPPAPPQAGGLCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVF 198
           FEILSLTGTVLPPPAPP AGGL IFLAG QGQVVGG+VV PL+AS PVILMAASFSNAVF
Sbjct: 182 FEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASFSNAVF 241

Query: 199 ERLPVEEED 203
           ERLP+EEE+
Sbjct: 242 ERLPIEEEE 248

[Close]

BLAST of MS021757 vs. TAIR 10
Match: AT4G35390.1 (AT-hook protein of GA feedback 1 )

HSP 1 Score: 228.4 bits (581), Expect = 5.1e-60
Identity = 117/168 (69.64%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 35  NAPPCNSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYAR 94
           +A    SS  RRPRGRP GSKNKPKPP I+TRDSPNVL SHVLEV++ +DI +++S YA 
Sbjct: 53  SATASGSSSGRRPRGRPAGSKNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYAT 112

Query: 95  RRGRGLSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGG 154
           RRG G+ I+SGTG V NVT+RQPAA A   G V+TLHGRF+ILSLTGT LPPPAPP AGG
Sbjct: 113 RRGCGVCIISGTGAVTNVTIRQPAAPAG--GGVITLHGRFDILSLTGTALPPPAPPGAGG 172

Query: 155 LCIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED 203
           L ++LAG QGQVVGG V G L+ASGPV+LMAASF+NAV++RLP+EEE+
Sbjct: 173 LTVYLAGGQGQVVGGNVAGSLIASGPVVLMAASFANAVYDRLPIEEEE 218

[Close]

BLAST of MS021757 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57
Identity = 107/163 (65.64%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 40  NSSLIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRG 99
           ++ + RRPRGRP GSKNKPKPPII+TRDS N L SHV+EV+   D+++S++ +ARRR RG
Sbjct: 84  DNHITRRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRG 143

Query: 100 LSILSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFL 159
           + +LSG G V NVT+RQPA+      SV+ LHGRFEILSL+G+ LPPPAPP A GL I+L
Sbjct: 144 ICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYL 203

Query: 160 AGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED 203
           AG QGQVVGG+VVGPL+ASGPV++MAASF NA +ERLP+EE+D
Sbjct: 204 AGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDD 246

[Close]

BLAST of MS021757 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-57
Identity = 106/160 (66.25%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 43  LIRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSAAADILDSLSNYARRRGRGLSI 102
           + RRPRGRP GSKNKPK PII+TRDS N L +HV+E+    DI+D ++ +ARRR RG+ +
Sbjct: 116 MTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCV 175

Query: 103 LSGTGTVANVTLRQPAACASPPGSVLTLHGRFEILSLTGTVLPPPAPPQAGGLCIFLAGA 162
           +SGTG+V NVT+RQP    SPPGSV++LHGRFEILSL+G+ LPPPAPP A GL ++LAG 
Sbjct: 176 MSGTGSVTNVTIRQP---GSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGG 235

Query: 163 QGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPVEEED 203
           QGQVVGG+VVGPL+ SGPV++MAASFSNA +ERLP+EE++
Sbjct: 236 QGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDE 272

The following BLAST results are available for this feature:

BLAST of MS021757 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144626.1	1.7e-105	100.00	AT-hook motif nuclear-localized protein 29-like [Momordica charantia] >XP_022144...	[more]
XP_022975382.1	1.3e-73	78.05	AT-hook motif nuclear-localized protein 29 [Cucurbita maxima]	[more]
XP_022935840.1	6.4e-73	77.56	AT-hook motif nuclear-localized protein 29-like [Cucurbita moschata]	[more]
KAG6591192.1	5.5e-72	77.56	AT-hook motif nuclear-localized protein 29, partial [Cucurbita argyrosperma subs...	[more]
XP_023515056.1	7.1e-72	76.59	AT-hook motif nuclear-localized protein 25-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MS021757 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K7	2.3e-65	67.49	AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9S7C9	2.4e-62	69.31	AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q6DBQ1	7.2e-59	69.64	AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22130	3.3e-56	65.64	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	4.4e-56	66.25	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of MS021757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUF1	8.1e-106	100.00	AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1ICX1	6.3e-74	78.05	AT-hook motif nuclear-localized protein 29 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FBT6	3.1e-73	77.56	AT-hook motif nuclear-localized protein 29-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A2P5DIY5	6.3e-66	75.68	PPC domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_249720 P...	[more]
A0A2P5ACL2	4.1e-65	75.00	PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345...	[more]

BLAST of MS021757 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76500.1	1.6e-66	67.49	Predicted AT-hook DNA-binding family protein	[more]
AT1G20900.1	1.7e-63	69.31	Predicted AT-hook DNA-binding family protein	[more]
AT4G35390.1	5.1e-60	69.64	AT-hook protein of GA feedback 1	[more]
AT2G45430.1	2.4e-57	65.64	AT-hook motif nuclear-localized protein 22	[more]
AT4G12050.1	3.1e-57	66.25	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 75..190 e-value: 1.6E-25 score: 89.6
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 69..202 score: 33.326454
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 75..162 e-value: 1.0108E-18 score: 76.085
IPR014476	AT-hook motif nuclear-localized protein 15-29	PIRSF	PIRSF016021	ESCAROLA	coord: 4..202 e-value: 1.4E-95 score: 317.9
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 25..202
None	No IPR available	GENE3D	3.30.1330.80		coord: 74..202 e-value: 4.5E-21 score: 77.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR31100:SF51	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29	coord: 25..202
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 71..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021757.1	MS021757.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding