MS021737 (gene) Bitter gourd (TR) v1

Overview


Name	MS021737
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	UPF0047 protein like
Location	scaffold1: 91213 .. 93338 (-)
RNA-Seq Expression	MS021737
Synteny	MS021737

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGCGCTGTTCTCTTGGCTGCACAAGCACAACCAGTCCGAGTAAAGTTGGCGAGGAGCATCAATTGCAATACCAGTAGTGGTCATCCGTCCGCCTCCGCAGGCTCAGGCACTCCAAGCCAGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGGTGATCAATTGCTTATCTTCTCCCACCAAATCCACAATCTCGTATTCATTTACTGGGGTTTATTTGAATGACCACCTTCTTTCTCTTTTCATAACTCCCCGATGCTTAGCCCATAGCTTCTCATCCACATCTTTCAGTTCCCCTATTACTACTTGAATTCTGAGAGTGTCGCATTCTTTTGATATATCCGAAAAAATCCTCTTATTTTCTTTTTAGTTTGAAGCAGAAAAAGAATCCTCTTTCTCATATTTGTATATGTATTGGATATTTCTCGTGTCATCAATATTTGATATCACTAGATAAAGAACCACTTATATTCTAAAGGTGGCTTTTACCAGAAAATGAAAATCAAAGAGAAGAATATTTTCGTTTGCAAACAGTCTTATATATATTTAAAGAATACTCAATCCCCATCCCTACATTTGTTGCACTAAAAAAAACTGCGGTGAGATTTTAAAATGGGGGGCGTTACAACTTTAACGTGCACTCAATTTTTCCTTATATTCCTGCTACTGATTTTGAATTCTGTATCAGATAATGAAGGAAATTGGACAAGACTTGGCAGAGTTCAAATGTGGCCTTGCTCATATCTTCTGTAAATCTTCTAATCCCATTTTCCTATTTCGGAGAATCATGTGTAGTTGAATTTATTTCTCGAATCATTTTATGTCTTTTCAGTGCAGCATACAAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCAGAGCGATACTGAAACCTTCCTCAATAGGATAGTGCCTGAAGTTAGTTTGTAATTGGCACTTATCATTTTCAACTCTCATTTATTGAAAGCTGTCCTATTTGACCCATTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCGGGGGTTGTTTGCAGGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTTATCGCAATTTATTTCCTTCTACTTTATACTTAGAATTTTCCCTGTTTTTTGTTTTCTGATTTCATATGCTGAAAAGGATAATATACTGCTAAAAGGGCCTGGGCCTGGGATTTTGTCTGCTATCATAATATTGTAAGACAATTTGAACACTTGTGATGTATAGGATGCTAAGGAAGGTGGTGCATGGCAATGGGGGACGAGAGAATATGAAAAGTAGTATTTTATGAGAAAAGGAAGAAAAGATCAACCAACAAGGGCCAAGAATATTTACTACTTAGATAGAAACGCAGACTGAAACAAAATTTCTCTGAAGTAACCTACATGTTATATTTGTAAAAACCAAACTCACTTCTGAACCTCCATCCCATCTAAAAGATGATTGAATTGGTAATTATTATCAATAATTAAGCTTCCGATAGAAAAGGATTCTTAGACTCAAACTAACGAATTTAAATAAACTAAAACCAGGATAAAACTAATTCAACAAATTTGTTACACCTACTTCTGGAAATTATTGAATGTATCTTAGAATAATAAAATAACTATCAAAACATGTTCTATATATAAAGAACACTATTGTTGCAAACTTTTCTTTTAGAACTTTCAAATAGAATGCAAGTGCTTCAGCATCGCGCATCCTGTTGTTCGGTCAAAAAGAAGAAGGGTTGTGCCCAGTCCTAAACAGCTCTTCCATTTTGCCTTTCGGGAATCAGATGATGCACAGAGAAAATTCATAAGAAATATAGGATGGGAGGTTTGGGAAGGCCTTTATTTTTCCTAAAAAAGTTACTCTCTGGTTTTCTAGTTCTAAAATGTTATAAGGATTGGGTATATTGACAATTTTTTTTGTCATTTTTGTTCATGCTGTCCTAGAGTCGAGCAAGCCATTCCTTTTTATATATATATATTTTGACAATGAATATGCTCATTATGCAGGTCCGGATGACATGCCAGCACATATTAAATCATCAATGTTTGGCTGTGCTCTCACG

mRNA sequence

ATGCAAGGCGCTGTTCTCTTGGCTGCACAAGCACAACCAGTCCGAGTAAAGTTGGCGAGGAGCATCAATTGCAATACCAGTAGTGGTCATCCGTCCGCCTCCGCAGGCTCAGGCACTCCAAGCCAGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGACAAGACTTGGCAGAGTTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACAAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCAGAGCGATACTGAAACCTTCCTCAATAGGATAGTGCCTGAAGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTCCGGATGACATGCCAGCACATATTAAATCATCAATGTTTGGCTGTGCTCTCACG

Coding sequence (CDS)

ATGCAAGGCGCTGTTCTCTTGGCTGCACAAGCACAACCAGTCCGAGTAAAGTTGGCGAGGAGCATCAATTGCAATACCAGTAGTGGTCATCCGTCCGCCTCCGCAGGCTCAGGCACTCCAAGCCAGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGACAAGACTTGGCAGAGTTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACAAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCAGAGCGATACTGAAACCTTCCTCAATAGGATAGTGCCTGAAGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTCCGGATGACATGCCAGCACATATTAAATCATCAATGTTTGGCTGTGCTCTCACG

Protein sequence

MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT

Homology

[Close]

BLAST of MS021737 vs. NCBI nr
Match: XP_022151749.1 (uncharacterized protein LOC111019630 isoform X1 [Momordica charantia])

HSP 1 Score: 307.4 bits (786), Expect = 7.0e-80
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA QAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 152

[Close]

BLAST of MS021737 vs. NCBI nr
Match: XP_022151829.1 (uncharacterized protein LOC111019630 isoform X2 [Momordica charantia])

HSP 1 Score: 307.4 bits (786), Expect = 7.0e-80
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA QAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 152

[Close]

BLAST of MS021737 vs. NCBI nr
Match: XP_008453044.1 (PREDICTED: UPF0047 protein YjbQ [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 6.8e-67
Identity = 132/152 (86.84%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGA++LA  AQP+RVKL RS   N+S+G+PSA+AGS  PS MAAAGPKWAQKTVTL PH
Sbjct: 1   MQGAIILA--AQPLRVKLLRS--NNSSTGNPSATAGSSNPSLMAAAGPKWAQKTVTLSPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDL+EFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLN+IV
Sbjct: 61  RRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSLFGCALT 148

[Close]

BLAST of MS021737 vs. NCBI nr
Match: XP_022936473.1 (uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 uncharacterized protein LOC111784738 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67
Identity = 133/152 (87.50%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S   N+S+G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLWS--NNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIG+DL+EFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 148

[Close]

BLAST of MS021737 vs. NCBI nr
Match: XP_022976235.1 (uncharacterized protein LOC111476694 [Cucurbita maxima])

HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67
Identity = 133/152 (87.50%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S   N+S+G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLGS--NNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIG DL+EFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 148

[Close]

BLAST of MS021737 vs. ExPASy Swiss-Prot
Match: P0AF49 (UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21
Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQ 109
           W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  V+
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCAL 152
            D E F  R VP+  +  ++H  EG DDMP+HIKSSM G +L
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSL 100

[Close]

BLAST of MS021737 vs. ExPASy Swiss-Prot
Match: P0AF48 (UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21
Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQ 109
           W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  V+
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCAL 152
            D E F  R VP+  +  ++H  EG DDMP+HIKSSM G +L
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSL 100

[Close]

BLAST of MS021737 vs. ExPASy Swiss-Prot
Match: O14155 (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4A8.02c PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20
Identity = 48/101 (47.52%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 52  QKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSD 111
           Q+ +TL    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D+D ++D
Sbjct: 5   QRIITLDRRSKGFYIITNDLVKKL-PELKSFSSGTVNFFIQHTSAALTINENWDADTRAD 64

Query: 112 TETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
               L++IVPE  SA ++HT EG DDMPAH+KSS+ G +LT
Sbjct: 65  MNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLT 102

[Close]

BLAST of MS021737 vs. ExPASy Swiss-Prot
Match: P0A2L2 (UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-18
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQ 109
           W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  V+
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCAL 152
           +D E    + VP+  +A ++H  EG DDMP+HIKSS+ G +L
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSL 100

[Close]

BLAST of MS021737 vs. ExPASy Swiss-Prot
Match: P0A2L1 (UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-18
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQ 109
           W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  V+
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCAL 152
           +D E    + VP+  +A ++H  EG DDMP+HIKSS+ G +L
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSL 100

[Close]

BLAST of MS021737 vs. ExPASy TrEMBL
Match: A0A6J1DDZ9 (uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019630 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.4e-80
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA QAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 152

[Close]

BLAST of MS021737 vs. ExPASy TrEMBL
Match: A0A6J1DE78 (uncharacterized protein LOC111019630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019630 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.4e-80
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA QAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 152

[Close]

BLAST of MS021737 vs. ExPASy TrEMBL
Match: A0A1S3BUP9 (UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.3e-67
Identity = 132/152 (86.84%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGA++LA  AQP+RVKL RS   N+S+G+PSA+AGS  PS MAAAGPKWAQKTVTL PH
Sbjct: 1   MQGAIILA--AQPLRVKLLRS--NNSSTGNPSATAGSSNPSLMAAAGPKWAQKTVTLSPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDL+EFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLN+IV
Sbjct: 61  RRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSS+FGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSLFGCALT 148

[Close]

BLAST of MS021737 vs. ExPASy TrEMBL
Match: A0A6J1IIX0 (uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 133/152 (87.50%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S   N+S+G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLGS--NNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIG DL+EFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 148

[Close]

BLAST of MS021737 vs. ExPASy TrEMBL
Match: A0A6J1FDC5 (uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC111443082 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 133/152 (87.50%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MQGAVLLAAQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S   N+S+G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLWS--NNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNRIV 120
           RRGCHLITPKIMKEIG+DL+EFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 153
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 148

[Close]

BLAST of MS021737 vs. TAIR 10
Match: AT1G21065.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). )

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-52
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 33  ASAGSGTPSQMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQ 92
           A+  +   S  +++G KWAQKT+TLPP RRGCHLITPKI+KEI +DL++F CGLAH+FLQ
Sbjct: 61  ANPATDRASMASSSGAKWAQKTITLPPLRRGCHLITPKILKEIREDLSDFNCGLAHVFLQ 120

Query: 93  HTSASLTINENYDSDVQSDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 152
           HTSASLTINENYD DVQ+DTETFLNRIVPEG SAPW+HT+EGPDDMPAHIKSSMFGC LT
Sbjct: 121 HTSASLTINENYDPDVQADTETFLNRIVPEGNSAPWRHTMEGPDDMPAHIKSSMFGCQLT 180

The following BLAST results are available for this feature:

BLAST of MS021737 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151749.1	7.0e-80	98.68	uncharacterized protein LOC111019630 isoform X1 [Momordica charantia]	[more]
XP_022151829.1	7.0e-80	98.68	uncharacterized protein LOC111019630 isoform X2 [Momordica charantia]	[more]
XP_008453044.1	6.8e-67	86.84	PREDICTED: UPF0047 protein YjbQ [Cucumis melo]	[more]
XP_022936473.1	8.9e-67	87.50	uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 unchar...	[more]
XP_022976235.1	8.9e-67	87.50	uncharacterized protein LOC111476694 [Cucurbita maxima]	[more]

BLAST of MS021737 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0AF49	5.8e-21	50.00	UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1	[more]
P0AF48	5.8e-21	50.00	UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1	[more]
O14155	2.9e-20	47.52	UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
P0A2L2	4.6e-18	47.06	UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1	[more]
P0A2L1	4.6e-18	47.06	UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700...	[more]

BLAST of MS021737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDZ9	3.4e-80	98.68	uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DE78	3.4e-80	98.68	uncharacterized protein LOC111019630 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BUP9	3.3e-67	86.84	UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1	[more]
A0A6J1IIX0	4.3e-67	87.50	uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694...	[more]
A0A6J1FDC5	4.3e-67	87.50	uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]

BLAST of MS021737 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21065.1	1.7e-52	76.67	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001602	Uncharacterised protein family UPF0047	PFAM	PF01894	UPF0047	coord: 67..151 e-value: 2.3E-23 score: 82.5
IPR001602	Uncharacterised protein family UPF0047	TIGRFAM	TIGR00149	TIGR00149	coord: 54..151 e-value: 3.8E-22 score: 76.4
IPR001602	Uncharacterised protein family UPF0047	PANTHER	PTHR30615	UNCHARACTERIZED PROTEIN YJBQ-RELATED	coord: 13..152
IPR035917	YjbQ-like superfamily	GENE3D	2.60.120.460		coord: 41..152 e-value: 1.4E-30 score: 107.9
IPR035917	YjbQ-like superfamily	SUPERFAMILY	111038	YjbQ-like	coord: 50..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..46
None	No IPR available	PANTHER	PTHR30615:SF14	SUBFAMILY NOT NAMED	coord: 13..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021737.1	MS021737.1	mRNA