MS021686 (gene) Bitter gourd (TR) v1

Overview


Name	MS021686
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Down syndrome critical region protein 3 homolog isoform X1
Location	scaffold348: 320696 .. 323725 (+)
RNA-Seq Expression	MS021686
Synteny	MS021686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGTAGAGCTCAGGCTTTCTCGGACCAATCGTATCTACCGGCCTTCTGTAAGTCTTCTCTTTCCACTTTCCAGTTTCCACTCTCTAATCTCATTACTGCTCCTCAAAATCCGTTACTCCTACTGTTGCAATGTTCAGGAACATCTTCAAGGCCAAATCATCGTCAATTCTCCTTCTTCGATTTCCCATAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATCTTCAGGTTTAATTTCGCGGTTTCTTTTGTTATTTGAAAAGGAGTTACATGCTCATACCATGTCTTTCAATCGAGTGCTTTCTGAGCTACTGAACGCCTTTGGTTTCGTGTCGGAGGGTAATTGCTCTACGTGTAATCATTACTCTATCTATTTCTTCTCCCGTTGGATGCATGTTATGCTGTAAAGATTCGCGGAGGGTCTGCGGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTACTCCGATAGTGTGAGTTGGCACTCTTTACGATTTTTAAATCAACTGTGTATTCTGCAGACGTACCATGTAAAAGTTATATGTGATATTTGAATTCATTTCCAACTTCTGAAGTTGCTCTCGCTTGGTTGCAATACAACATGAAATCATATAAGATACGGTTAGGGAATTGAATGCTTTCACTAGTGGTAACGACTACTAAACTTGAAATTTATATTGGATATGGTTAGCGTATCATTTTGTCTTTTTATTTATCTAATAGATATAGCGGTTAATTTTGTTTCCCCCCTCATAATGACAGGAATAAGAGCATTGAGGTAAGACCATCTGGGAAGCTTGCTTCAGGTACAACTGAGGTATATTAGCCTTTGAAAGCTATGGAGTTTATATATGAATCAATGTTATAATTGTTTATTCACTCAGATTTTTCTTTTAAATTTTGTCCAATACTTATTTTCTTTGTTACACAATTGTATGTTTTGTTTATTGTTCATATCTTCCTGAGCCTGGATAACAGCCTCTTAAAATGGCTCATACTGCGTGTGCCGGATATCTTGTGTAGTTATAATGTTATATAGTTACTTGCTTATTGTTGCCTGCACGTTCAGATAGTTCACTGGACTGATTCCCTCAAAATCATGCAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAACCTTGGGAAGATTTTACGAGACTTTTCATGGAACTAACATAAACATTCAGGTGAAAGTTGTTAATCTTTCTAATTTCCCCTTTACTTTCTTCACACTATGAGTAAATGACTATTTGGTGTTCTGATTTTCACTCTAGTTTACCTCCCCACCACGAAAATAAACGAGATTTCTCTTAACATAAACCTGATATTTGTTCAATTACTGAATAGTATGATAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTGTCTGCCACGATCGAGTTTATAGTTGAAAGTGATACAGGTACGATTTATTAGACCCTTCACTGTTATATATTTAACACAAGTATATGAAAATAATCTTTTTCTTTTGTTTTGTTACTAGCTGATCTTCTCGAGCGGCCATTGTCTTCTGAGATGGTTATCTTTTACATCACCCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTCTTTTCATCATAGTTCCTTTTCTATTATGTGTTTCTTTTATCTTATACAGGTGTGATTTTATTATATGATAATATTTTTTTTTTTATTTTCACGTGGGAATATTTGAACATAAGCCAACTACGGTAGTAGATAGAAGAAACAAACTATAGCTTAGTATTTTATTTTCTATTTTAAATTTTATTTTCTATTTTTTATTTTCTATTTTCTATTTCAGTACTTATCCTTTTGCTGATGAGAGGTACTTCTAAATAGGTGGTTTTCGAGTGACAGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAACTGTTGAAGCATCTGCAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTTATTCTTGGAGAGAGAATCATAACTGAAACCTCTGTGATCCAATCTACCCAGGTATGTGCCATCTCATCTGCTCCGCGTATTTTAGTTTTTGCCTGTACAAAATTTCATATAAACTTACTGAGCTATTTTTATTTTATCCCTAGATAGCAGATGGAGACGTTTGTCGCAACATTACTCTGCCTATTTATGTCATACTACCCCGCCTTTTAACCTGCCCAACAGTCTTTGCTGGGTGAGTTGCAAATATAATAACTGCTGCACTACATTTTCAATGTCAGAGTTATCTGTTTTAGGTGCAAATACAAGTCCTTTGTATTAATCTCCTGTTAGTTCAACCAGAAATGAAAATTTTATATTTTGGCTTCTGACGTTCCTCGTTTACTTAATTCTTTTAGCAAATTTAAATATAGCCAATGTACTATTTTTGTCTACTAATCAAGATTGAGTTGTTACTGATAAACCTATTTGATGGCAAGTGGGCACGAAGCAAATGTGATTACATTGGAGGGATTGAATGACCGTTTGAATACTAATAACAGTTGTCATTCATTTCAATATTTCCCAATAAATTTCATTTTATATTCTTAACTGTGTGATGAGAAGTGAGAAAACACTCATGGAACCAAATGTATAAAACCCATTCGGCCTTTTCATTTTACCATATGATTGTAATGAATTCTAATACTGTATATCAAATAAGTTTATTTTGTTAATGATCGGAAGCAGCCTTGGTAAGTTGTTCCTTTGAAGTTCTCTCTGTGGTATCAGGTCTTGTTGAAGTGCAGTCTATCTGTTAATTGTGTGTCCATCTGTTTCTTCTCTGTCATTCTCATTTTTTACTTGGCATTTATTCCGCTAATAACGTGTCCTAATTGTTTATGACAGTCCCTTTTCAATTGAATTCAAAGTTTACATCGTTATAACCTTTCAGTCAGAGCTATCAAAATTACATTCCAAGACTGATCCAAGAACTCCAAGACTATGGGTGATCATCTCTCTCCCTCTCTCTCTC

mRNA sequence

ATGCCAGTAGAGCTCAGGCTTTCTCGGACCAATCGTATCTACCGGCCTTCTGAACATCTTCAAGGCCAAATCATCGTCAATTCTCCTTCTTCGATTTCCCATAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATCTTCAGATTCGCGGAGGGTCTGCGGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTACTCCGATAGTGAATAAGAGCATTGAGGTAAGACCATCTGGGAAGCTTGCTTCAGGTACAACTGAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAACCTTGGGAAGATTTTACGAGACTTTTCATGGAACTAACATAAACATTCAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTGTCTGCCACGATCGAGTTTATAGTTGAAAGTGATACAGCTGATCTTCTCGAGCGGCCATTGTCTTCTGAGATGGTTATCTTTTACATCACCCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACAGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAACTGTTGAAGCATCTGCAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTTATTCTTGGAGAGAGAATCATAACTGAAACCTCTGTGATCCAATCTACCCAGATAGCAGATGGAGACGTTTGTCGCAACATTACTCTGCCTATTTATGTCATACTACCCCGCCTTTTAACCTGCCCAACAGTCTTTGCTGGTCCCTTTTCAATTGAATTCAAAGTTTACATCGTTATAACCTTTCAGTCAGAGCTATCAAAATTACATTCCAAGACTGATCCAAGAACTCCAAGACTATGGGTGATCATCTCTCTCCCTCTCTCTCTC

Coding sequence (CDS)

ATGCCAGTAGAGCTCAGGCTTTCTCGGACCAATCGTATCTACCGGCCTTCTGAACATCTTCAAGGCCAAATCATCGTCAATTCTCCTTCTTCGATTTCCCATAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATCTTCAGATTCGCGGAGGGTCTGCGGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTACTCCGATAGTGAATAAGAGCATTGAGGTAAGACCATCTGGGAAGCTTGCTTCAGGTACAACTGAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAACCTTGGGAAGATTTTACGAGACTTTTCATGGAACTAACATAAACATTCAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTGTCTGCCACGATCGAGTTTATAGTTGAAAGTGATACAGCTGATCTTCTCGAGCGGCCATTGTCTTCTGAGATGGTTATCTTTTACATCACCCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACAGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAACTGTTGAAGCATCTGCAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTTATTCTTGGAGAGAGAATCATAACTGAAACCTCTGTGATCCAATCTACCCAGATAGCAGATGGAGACGTTTGTCGCAACATTACTCTGCCTATTTATGTCATACTACCCCGCCTTTTAACCTGCCCAACAGTCTTTGCTGGTCCCTTTTCAATTGAATTCAAAGTTTACATCGTTATAACCTTTCAGTCAGAGCTATCAAAATTACATTCCAAGACTGATCCAAGAACTCCAAGACTATGGGTGATCATCTCTCTCCCTCTCTCTCTC

Protein sequence

MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPRLWVIISLPLSL

Homology

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BLAST of MS021686 vs. NCBI nr
Match: XP_022137704.1 (Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 306/312 (98.08%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV
Sbjct: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV
Sbjct: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI
Sbjct: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCRNITLPIYVI PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLHSKTDPRTPR
Sbjct: 241 ADGDVCRNITLPIYVIPPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I SLPL L
Sbjct: 301 LWLAIESLPLEL 312

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BLAST of MS021686 vs. NCBI nr
Match: XP_038895697.1 (vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.3e-154
Identity = 284/312 (91.03%), Postives = 298/312 (95.51%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           MPVEL+LSRTNRIYRPSEHLQG IIVNS SSISHSGIRLA+NGSVNLQ+RGGSAGVIESV
Sbjct: 1   MPVELKLSRTNRIYRPSEHLQGHIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKP  IVN+ +EVRPSGKLASGTTEIPFS+ILRQP+E LG+FYETFHGT+INIQYLV
Sbjct: 61  YGVIKPIAIVNRIVEVRPSGKLASGTTEIPFSVILRQPNEILGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TVDISRGYLHKSLSATIEFIVESDTAD +ERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVDISRGYLHKSLSATIEFIVESDTADFVERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKMSTLCSLSDPITGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMSTLCSLSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCR ITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITF+SELSKLH KTDPRTPR
Sbjct: 241 ADGDVCRKITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFESELSKLHPKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I +LPL L
Sbjct: 301 LWLAIENLPLEL 312

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BLAST of MS021686 vs. NCBI nr
Match: XP_022924207.1 (Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] >XP_023520407.1 Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 285/312 (91.35%), Postives = 296/312 (94.87%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNS SSISH GI L +NGSVNLQ+RGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKP  IVN+SIEVRPSGKL SGTTEIPFS+ILRQPSE LG+FYETFHGT+INIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSATIEFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKM+TLCSLSDPITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCRNITLPIY ILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLH KTDPRTPR
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I SLPL L
Sbjct: 301 LWLAIESLPLEL 312

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BLAST of MS021686 vs. NCBI nr
Match: XP_004137506.1 (vacuolar protein sorting-associated protein 26C [Cucumis sativus] >KGN64179.1 hypothetical protein Csa_013429 [Cucumis sativus])

HSP 1 Score: 549.7 bits (1415), Expect = 1.7e-152
Identity = 281/310 (90.65%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           VEL+LSRTNRIYRPSEHLQGQIIVNS SSISHSGIRLA+NGSVNLQ+RGGSAGVIESVYG
Sbjct: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTV 122
           VIKP  IVN+SI V PSGKLASGT EIPFS+ILRQP+E LG++YETFHGT+INIQYLVTV
Sbjct: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123

Query: 123 DISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           DISRGYLHKSLSAT+EFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183

Query: 183 TGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIAD 242
           TGKMSTLCSLSDP+TGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQIAD
Sbjct: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243

Query: 243 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPRLW 302
           GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLH KTDPRTPRLW
Sbjct: 244 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 303

Query: 303 VII-SLPLSL 312
           + I SLP+ L
Sbjct: 304 LAIESLPMEL 313

[Close]

BLAST of MS021686 vs. NCBI nr
Match: KAG6584315.1 (Vacuolar protein sorting-associated protein 26C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152
Identity = 283/312 (90.71%), Postives = 295/312 (94.55%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHL+GQIIVNS SSISH GI L +NGSVNLQ+RGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLRGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKP  IVN+SIEVRPSGKL SGTTEIPFS+ILRQPSE LG+FYETFHGT+INIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSATIEFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKM+TLCSLS PITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMATLCSLSGPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCRNITLPIY ILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLH KTDPRTPR
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I SLPL L
Sbjct: 301 LWLAIESLPLEL 312

[Close]

BLAST of MS021686 vs. ExPASy Swiss-Prot
Match: O35075 (Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.0e-51
Identity = 110/286 (38.46%), Postives = 173/286 (60.49%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           +++++ R N++Y   E L G ++++S  S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSI-ILRQPSETLGRFYETFHGTNINIQYLVT 122
            +KP  I+N +I+V   GK+ SG TE+PF   +L + S+ L   YET+HG  +NIQY + 
Sbjct: 65  SVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVL---YETYHGVFVNIQYTLR 124

Query: 123 VDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFR 182
            D+ R  L K L+ T EFIV S      +  L+   V F IT +T ++ +        F 
Sbjct: 125 CDMRRSLLAKDLTKTCEFIVHSAPQ---KGKLTPSPVDFTITPETLQN-VKERASLPKFF 184

Query: 183 VTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 242
           + G + ST C+++ P+TGEL VE S   I SI++ L RVE+    E    + + IQ+ QI
Sbjct: 185 IRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQI 244

Query: 243 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSE 287
           ADGD+CRN+++P+Y++ PRL TCPT+    F +EF+V +V+   ++
Sbjct: 245 ADGDICRNLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHAD 283

[Close]

BLAST of MS021686 vs. ExPASy Swiss-Prot
Match: Q5RF33 (Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 113/284 (39.79%), Postives = 166/284 (58.45%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           +++++ R N++Y   E L G ++++S  S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTV 122
            +KP  I+N +IE+   GK  SG TEIPF   L      +   YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSNIEMVKPGKFPSGKTEIPFEFPLHVKGNKV--LYETYHGVFVNIQYTLRC 124

Query: 123 DISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYIT----QDTQRHPLLPELKSG 182
           D+ R  L K L+ T EFIV S      +   S   V F IT    Q+ +   LLP+    
Sbjct: 125 DMKRSLLAKDLTKTCEFIVHSAPQ---KGKFSPSPVHFTITPETLQNARERALLPK---- 184

Query: 183 GFRVTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQS 242
            F + G + ST C ++ P+TGEL VE+S   I S+++ L RVE+    E    + + IQ+
Sbjct: 185 -FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQN 244

Query: 243 TQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVI 282
            QIADGDVCR +++PIY++ PRL TCPT+    F +EF+V IV+
Sbjct: 245 IQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVV 278

[Close]

BLAST of MS021686 vs. ExPASy Swiss-Prot
Match: O14972 (Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-50
Identity = 111/281 (39.50%), Postives = 164/281 (58.36%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           +++++ R N++Y   E L G ++++S  S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTV 122
            +KP  I+N +IE+   GK  SG TEIPF   L      +   YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKV--LYETYHGVFVNIQYTLRC 124

Query: 123 DISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYIT-QDTQRHPLLPELKSGGFR 182
           D+ R  L K L+ T EFIV S        P   +  I   T Q+ +   LLP+     F 
Sbjct: 125 DMKRSLLAKDLTKTCEFIVHSAPQKGKFTPSPVDFTITPETLQNVKERALLPK-----FL 184

Query: 183 VTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 242
           + G + ST C ++ P+TGEL VE+S   I S+++ L RVE+    E    + + IQ+ QI
Sbjct: 185 LRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQI 244

Query: 243 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVI 282
           ADGDVCR +++PIY++ PRL TCPT+    F +EF+V IV+
Sbjct: 245 ADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVV 278

[Close]

BLAST of MS021686 vs. ExPASy Swiss-Prot
Match: Q54DI8 (Vacuolar protein sorting-associated protein 26C OS=Dictyostelium discoideum OX=44689 GN=vps26c PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.7e-46
Identity = 101/288 (35.07%), Postives = 169/288 (58.68%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           ++L+L + ++IYRP   + G +++NS   +SHSG+ + V G+V LQ+   S G+ E+ Y 
Sbjct: 5   LDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAFYN 64

Query: 63  VIKPTPIVNKSIEV-RPSGKLASGTTEIPFSIILRQ-PSETLGRFYETFHGTNINIQYLV 122
            +KP  +++ +I V    GK  +G TE+PF   L   P++ L   Y+T+HG  +NIQY +
Sbjct: 65  SLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQL---YDTYHGVFVNIQYSI 124

Query: 123 TVDISRGYLHKSLSATIEFIVE--SDTADLLERPLSSEMVIFYITQDT-QRHPLLPELKS 182
             D+ RG L K LS TIEFIVE  S   ++L +     ++ F IT D+      + +   
Sbjct: 125 KCDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSLVNFKKISKADV 184

Query: 183 GGFRVTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQ 242
             F+++G + S +C++++   G + +E++   I S+++ L RVE+    +    E + IQ
Sbjct: 185 PTFKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTEIQ 244

Query: 243 STQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQ 285
           + QIADGD+ RN  +P+Y++ PRL TC +     F IEF+V +VI  +
Sbjct: 245 NIQIADGDIWRNFKIPLYMVFPRLFTCISTAGKTFKIEFEVNLVIMLE 289

[Close]

BLAST of MS021686 vs. ExPASy TrEMBL
Match: A0A6J1C810 (Down syndrome critical region protein 3 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009075 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.1e-165
Identity = 306/312 (98.08%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV
Sbjct: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV
Sbjct: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI
Sbjct: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCRNITLPIYVI PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLHSKTDPRTPR
Sbjct: 241 ADGDVCRNITLPIYVIPPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I SLPL L
Sbjct: 301 LWLAIESLPLEL 312

[Close]

BLAST of MS021686 vs. ExPASy TrEMBL
Match: A0A6J1E8A3 (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431725 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.2e-154
Identity = 285/312 (91.35%), Postives = 296/312 (94.87%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNS SSISH GI L +NGSVNLQ+RGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKP  IVN+SIEVRPSGKL SGTTEIPFS+ILRQPSE LG+FYETFHGT+INIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSATIEFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKM+TLCSLSDPITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCRNITLPIY ILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLH KTDPRTPR
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I SLPL L
Sbjct: 301 LWLAIESLPLEL 312

[Close]

BLAST of MS021686 vs. ExPASy TrEMBL
Match: A0A0A0LT45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.0e-153
Identity = 281/310 (90.65%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           VEL+LSRTNRIYRPSEHLQGQIIVNS SSISHSGIRLA+NGSVNLQ+RGGSAGVIESVYG
Sbjct: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTV 122
           VIKP  IVN+SI V PSGKLASGT EIPFS+ILRQP+E LG++YETFHGT+INIQYLVTV
Sbjct: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123

Query: 123 DISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           DISRGYLHKSLSAT+EFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183

Query: 183 TGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIAD 242
           TGKMSTLCSLSDP+TGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQIAD
Sbjct: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243

Query: 243 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPRLW 302
           GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLH KTDPRTPRLW
Sbjct: 244 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 303

Query: 303 VII-SLPLSL 312
           + I SLP+ L
Sbjct: 304 LAIESLPMEL 313

[Close]

BLAST of MS021686 vs. ExPASy TrEMBL
Match: A0A1S3CMM2 (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502664 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152
Identity = 282/310 (90.97%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           VEL+LSRTNRIYRP EHLQGQIIVNS SSISHSGIR+A+NGSVNLQ+RGGSAGVIESVYG
Sbjct: 4   VELKLSRTNRIYRPCEHLQGQIIVNSRSSISHSGIRIALNGSVNLQVRGGSAGVIESVYG 63

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTV 122
           VIKP  IVN+SI VRPSGKLASGT EIPFS+ILRQPSE LG+FYETFHGT+INIQYLVTV
Sbjct: 64  VIKPILIVNRSILVRPSGKLASGTNEIPFSVILRQPSENLGKFYETFHGTDINIQYLVTV 123

Query: 123 DISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           DISRGYLHKSLSAT+EFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183

Query: 183 TGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIAD 242
           TGKMSTLCSLSDPITGEL VE SAV INSIDIHLCRVESVILGERIITETSVIQ+TQIAD
Sbjct: 184 TGKMSTLCSLSDPITGELIVETSAVLINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243

Query: 243 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPRLW 302
           GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLH KTDPRTPRLW
Sbjct: 244 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 303

Query: 303 VII-SLPLSL 312
           + I SLP+ L
Sbjct: 304 LAIESLPMEL 313

[Close]

BLAST of MS021686 vs. ExPASy TrEMBL
Match: A0A6J1KM64 (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495832 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.8e-152
Identity = 281/312 (90.06%), Postives = 293/312 (93.91%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNS SSISH GI L +NGSVNLQ+RGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120
           YGVIKP  IVN+SIEVRPSGKL SGTTEIPFS+ILRQP E LG+FYETFHGT+INIQYLV
Sbjct: 61  YGVIKPISIVNRSIEVRPSGKLPSGTTEIPFSVILRQPDENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSATIEFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240
           RVTGKM+TLCSLSDPITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPR 300
           ADGDVCRNI LPIY ILPRLLTCPTVFAGPFSIEFKVY VITFQSELSK+H KTDPRTPR
Sbjct: 241 ADGDVCRNIALPIYAILPRLLTCPTVFAGPFSIEFKVYTVITFQSELSKVHPKTDPRTPR 300

Query: 301 LWVII-SLPLSL 312
           LW+ I SLPL L
Sbjct: 301 LWLAIESLPLEL 312

[Close]

BLAST of MS021686 vs. TAIR 10
Match: AT1G48550.1 (Vacuolar protein sorting-associated protein 26 )

HSP 1 Score: 444.9 bits (1143), Expect = 5.3e-125
Identity = 221/311 (71.06%), Postives = 267/311 (85.85%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           V ++LSR+NRIYR SE ++G+I++ S +SISH  IRL+VNGSVNLQ+RGGSAGVIES YG
Sbjct: 7   VNVKLSRSNRIYRSSEPVEGKIVIKSATSISHQAIRLSVNGSVNLQVRGGSAGVIESFYG 66

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSE-TLGRFYETFHGTNINIQYLVT 122
           VIKP  IV K+IEV+ SGK+  GTTEIPFS+ LR+P E  + +FYETFHGTNINIQYL+T
Sbjct: 67  VIKPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLREPGEGIVEKFYETFHGTNINIQYLLT 126

Query: 123 VDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFR 182
            DI RGYLHK LSAT+EFI+ES   DL ERP+  E+VIFYITQDTQRHPLLP++K+GGFR
Sbjct: 127 ADIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFYITQDTQRHPLLPDIKTGGFR 186

Query: 183 VTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIA 242
           VTGK++T CSL DP++GELTVEAS+VPI SIDIHL RVES+I+GERI+TETS+IQSTQIA
Sbjct: 187 VTGKLATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIA 246

Query: 243 DGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPRL 302
           DGDVCRN+TLPIYV+LPRLL CP+VFAGPFS+EFKV I I+F+S+L+K   K+DP  PRL
Sbjct: 247 DGDVCRNMTLPIYVLLPRLLMCPSVFAGPFSVEFKVCITISFKSKLAKAQPKSDPTAPRL 306

Query: 303 WVIIS-LPLSL 312
           W+ +  LPL L
Sbjct: 307 WMALERLPLEL 317

[Close]

BLAST of MS021686 vs. TAIR 10
Match: AT1G48550.2 (Vacuolar protein sorting-associated protein 26 )

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-120
Identity = 217/311 (69.77%), Postives = 263/311 (84.57%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62
           V ++LSR+NRIYR SE ++G+I++ S +SISH  IRL+VNGSVNLQ+RGGSAGVIES YG
Sbjct: 7   VNVKLSRSNRIYRSSEPVEGKIVIKSATSISHQAIRLSVNGSVNLQVRGGSAGVIESFYG 66

Query: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSE-TLGRFYETFHGTNINIQYLVT 122
           VIKP  IV K+IEV+ SGK+  GTTEIPFS+ LR+P E  + +FYETFHGTNINIQ    
Sbjct: 67  VIKPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLREPGEGIVEKFYETFHGTNINIQ---V 126

Query: 123 VDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFR 182
            +I RGYLHK LSAT+EFI+ES   DL ERP+  E+VIFYITQDTQRHPLLP++K+GGFR
Sbjct: 127 SNIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFYITQDTQRHPLLPDIKTGGFR 186

Query: 183 VTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIA 242
           VTGK++T CSL DP++GELTVEAS+VPI SIDIHL RVES+I+GERI+TETS+IQSTQIA
Sbjct: 187 VTGKLATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIA 246

Query: 243 DGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHSKTDPRTPRL 302
           DGDVCRN+TLPIYV+LPRLL CP+VFAGPFS+EFKV I I+F+S+L+K   K+DP  PRL
Sbjct: 247 DGDVCRNMTLPIYVLLPRLLMCPSVFAGPFSVEFKVCITISFKSKLAKAQPKSDPTAPRL 306

Query: 303 WVIIS-LPLSL 312
           W+ +  LPL L
Sbjct: 307 WMALERLPLEL 314

The following BLAST results are available for this feature:

BLAST of MS021686 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137704.1	1.9e-164	98.08	Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia]	[more]
XP_038895697.1	2.3e-154	91.03	vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida]	[more]
XP_022924207.1	1.5e-153	91.35	Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] ...	[more]
XP_004137506.1	1.7e-152	90.65	vacuolar protein sorting-associated protein 26C [Cucumis sativus] >KGN64179.1 hy...	[more]
KAG6584315.1	2.8e-152	90.71	Vacuolar protein sorting-associated protein 26C, partial [Cucurbita argyrosperma...	[more]

BLAST of MS021686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35075	5.0e-51	38.46	Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps2...	[more]
Q5RF33	1.4e-50	39.79	Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26...	[more]
O14972	3.2e-50	39.50	Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26...	[more]
Q54DI8	3.7e-46	35.07	Vacuolar protein sorting-associated protein 26C OS=Dictyostelium discoideum OX=4...	[more]

BLAST of MS021686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C810	9.1e-165	98.08	Down syndrome critical region protein 3 homolog isoform X1 OS=Momordica charanti...	[more]
A0A6J1E8A3	7.2e-154	91.35	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita moschata...	[more]
A0A0A0LT45	8.0e-153	90.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=3 SV=1	[more]
A0A1S3CMM2	3.0e-152	90.97	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1KM64	6.8e-152	90.06	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of MS021686 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48550.1	5.3e-125	71.06	Vacuolar protein sorting-associated protein 26	[more]
AT1G48550.2	1.4e-120	69.77	Vacuolar protein sorting-associated protein 26	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028934	Vacuolar protein sorting protein 26 related	PFAM	PF03643	Vps26	coord: 10..282 e-value: 2.7E-32 score: 111.9
IPR028934	Vacuolar protein sorting protein 26 related	PANTHER	PTHR12233	VACUOLAR PROTEIN SORTING 26 RELATED	coord: 3..294
IPR014752	Arrestin-like, C-terminal	GENE3D	2.60.40.640		coord: 184..292 e-value: 3.9E-23 score: 83.7
IPR014752	Arrestin-like, C-terminal	GENE3D	2.60.40.640		coord: 2..144 e-value: 1.7E-27 score: 97.7
None	No IPR available	PANTHER	PTHR12233:SF2	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C	coord: 3..294
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 2..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021686.1	MS021686.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport