MS021661 (gene) Bitter gourd (TR) v1

Overview


Name	MS021661
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MRP-S28 domain-containing protein
Location	scaffold348: 148138 .. 149782 (-)
RNA-Seq Expression	MS021661
Synteny	MS021661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGAGCTCTATGGAGAGCTGTCTTCAATGTCTATGCTCGGAGCGTTTCCATCTCTCCTCCCCTTCAAACCCCGTGCTCCGGTCACTTTCCGGCTCGATTTGCCGTTTTGGCTTCCCTCCAACCGCGATGTTACTCATCCAAGAATGACAAGTACAATGGATTGAACTCAACCACGAATCAGAACGATCATTCTGTCGTCGACGATGATGTCAGTACCGAAGGTAAACAAATATGAAAGTTGTTTGTCAATTTTGTTTGTTTTGTTTAGCAATTCTGAGAAGAAGAAAATTTTCAAAATCTTAAGTGGAATTTTGGGATTTATTTATTTATTTTTATTATTTACGGATAATCGAGATTGTTGATGGTAATATTTTGTATGAGTTTCTACTCCAACGTTTGGTTATGAATATGATTTTTTATAACTTTTGCCTAAACTTGCAAAGAAATTTTGGGTGCTGAGTTCTACTCTTGTATTTCAAATCACGAGTCATTTAAAGTCTTATATTCATGTTGGAGATAATTGGGAAGTTCAAGTCGAAAGATTTTTTGCACTTTTCGTTTTCATTTCGTGAAATGATGGTTTTTATCTACTTGACATGATAATTGCCAATCTTAAGATTCGTGTACAGTTTTTGTCATTTTGTTAAAATATGGAGTTAATGAGTTGGTATTAGTTTAGCATAATATTTGACTTGAAGTTGAAGATTTTGAGTAATCTCTGGCTTATGTCCGGTGTAATTTAAACGATTCAATTCAGTGACATTAGCAGCTTAACATTAGATACGTTTGGAACTGTTGTTAAAGAAATGCTTTTATCAAAATTCTTTTATGATAAGGACTTTAACATAAAGTGTAATAAAAATTCATTCTGTTTGTTGGTTCTAATATATTAAAAGTGCTTTTAAGCGAAGTAAAGATCTTTTTTGAATTGAGCATTATTTTAGGGAATCATGTGAAAATAATAAAAATTGCAAGAGTATGTTTAGATAGAAATTAGTGAGAGAGAAGAAGTATGTAGGTAAAGAGGAATTGTAGCGAATGCCAAACACAAACAATTTAGGTTGAAAATGTTAACCTATAAATAGCACAATTGGTTAAAGCATAGATTCAGATTTGAATCTTCACTCTCACATATTGTTGAACACAAACAAAAAACACTTTTGTACATGCCTAAAGATGTTTCAAATCTGTTCACTGCCATGAAGCTAGTTGTTAATTCAGATTAATTTTTTATGATATGATTAATTTTCATTAAAAGGAAAAGAAATCAACAGACATTGTCATCTTATTCACCAGTGGTTCTGAGTTTCTAGCTTCGTAGCCCATGTGTGATTTTGGAGTTAATACTGCAAGTTTCTGTGATTGCAGAGCTGAAGAGGAAGATAGATAAATTTTACGAGGGTGATGTCGAGTCATTACCATCGATATTTGAAGCAATTTTGAAGAGGAAGCTGTCAGGAAAACACGAAGGTGCTGATGATGAGCTTATGAAAGAAATTCGGCAGCGAATGCCTGGACAAATGGAAGATTTTAAAGATGATGAATGTGCATCTGATTTAAACGGGTTTGAGGAAACTGATGAAGAAATAGATGATTTCAGTCATGCCAGAGATTCGAGTGATTCTGAGGAAGAAGATAGA

mRNA sequence

ATGAATCGAGCTCTATGGAGAGCTGTCTTCAATGTCTATGCTCGGAGCGTTTCCATCTCTCCTCCCCTTCAAACCCCGTGCTCCGGTCACTTTCCGGCTCGATTTGCCGTTTTGGCTTCCCTCCAACCGCGATGTTACTCATCCAAGAATGACAAGTACAATGGATTGAACTCAACCACGAATCAGAACGATCATTCTGTCGTCGACGATGATGTCAGTACCGAAGAGCTGAAGAGGAAGATAGATAAATTTTACGAGGGTGATGTCGAGTCATTACCATCGATATTTGAAGCAATTTTGAAGAGGAAGCTGTCAGGAAAACACGAAGGTGCTGATGATGAGCTTATGAAAGAAATTCGGCAGCGAATGCCTGGACAAATGGAAGATTTTAAAGATGATGAATGTGCATCTGATTTAAACGGGTTTGAGGAAACTGATGAAGAAATAGATGATTTCAGTCATGCCAGAGATTCGAGTGATTCTGAGGAAGAAGATAGA

Coding sequence (CDS)

ATGAATCGAGCTCTATGGAGAGCTGTCTTCAATGTCTATGCTCGGAGCGTTTCCATCTCTCCTCCCCTTCAAACCCCGTGCTCCGGTCACTTTCCGGCTCGATTTGCCGTTTTGGCTTCCCTCCAACCGCGATGTTACTCATCCAAGAATGACAAGTACAATGGATTGAACTCAACCACGAATCAGAACGATCATTCTGTCGTCGACGATGATGTCAGTACCGAAGAGCTGAAGAGGAAGATAGATAAATTTTACGAGGGTGATGTCGAGTCATTACCATCGATATTTGAAGCAATTTTGAAGAGGAAGCTGTCAGGAAAACACGAAGGTGCTGATGATGAGCTTATGAAAGAAATTCGGCAGCGAATGCCTGGACAAATGGAAGATTTTAAAGATGATGAATGTGCATCTGATTTAAACGGGTTTGAGGAAACTGATGAAGAAATAGATGATTTCAGTCATGCCAGAGATTCGAGTGATTCTGAGGAAGAAGATAGA

Protein sequence

MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTTNQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR

Homology

[Close]

BLAST of MS021661 vs. NCBI nr
Match: XP_022137035.1 (uncharacterized protein LOC111008596 [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT
Sbjct: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
           NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR
Sbjct: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 167
           QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR
Sbjct: 121 QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 166

[Close]

BLAST of MS021661 vs. NCBI nr
Match: XP_023519890.1 (uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-46
Identity = 113/167 (67.66%), Postives = 129/167 (77.25%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RA+W AVF V +R VSISP LQT  SG     F+V  + Q RCYS+ NDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFTVCSRRVSISPLLQTLRSGPLLPPFSVSIASQSRCYSTGNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
            +N  S+VDDDVS EELKRKID+FYEGDVESLP+IFEAILKRKLSGKH  ADDELMKEIR
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNG-FEETDEEIDDFSHARDSSDSEEEDR 167
           QRMPG++EDFKD+E  SDL+G   ETDEE+++         SEEEDR
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGELNETDEEMEE-------DPSEEEDR 160

[Close]

BLAST of MS021661 vs. NCBI nr
Match: KAG7019929.1 (hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.5 bits (493), Expect = 7.2e-46
Identity = 112/167 (67.07%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RA+W AVF   +R VSISP LQT  SG     F+V  S Q RCYSS NDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
            +N  S+VDDD+S EELKRKID+FYEGD+ESLP+IFEAILKRKLSGKH  ADDELMKEIR
Sbjct: 61  IENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNG-FEETDEEIDDFSHARDSSDSEEEDR 167
           QRMPG++EDFKD+E  SDL+G   E+DEE+ + S       SEEEDR
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDS-------SEEEDR 160

[Close]

BLAST of MS021661 vs. NCBI nr
Match: XP_022924024.1 (uncharacterized protein LOC111431572 [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 7.2e-46
Identity = 113/167 (67.66%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RA+W AVF   +R VSISP LQT  SG     F+V  S Q RCYSS NDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFTACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
            +N  S+VDDDVS EELKRKID+FYEGDVESLP+IFEAILKRKLSGKH  ADDELMKEIR
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNG-FEETDEEIDDFSHARDSSDSEEEDR 167
           QR+PG++EDFKD+E  SDL+G   E+DEE+ + S       SEEEDR
Sbjct: 121 QRVPGEVEDFKDEEYDSDLSGELNESDEEMKEDS-------SEEEDR 160

[Close]

BLAST of MS021661 vs. NCBI nr
Match: KAG6584340.1 (hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 112/167 (67.07%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RA+W AVF   +R VSISP LQT  SG     F+V  S Q RCYSS NDKYNGLNST+
Sbjct: 1   MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTS 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
            +N  S+VDDD+S EELKRKID+FYEGDVESLP+IFEAILKRKLSGKH  ADDELMKEIR
Sbjct: 61  IENKDSLVDDDISNEELKRKIDRFYEGDVESLPAIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNG-FEETDEEIDDFSHARDSSDSEEEDR 167
           QRMPG++EDFKD+E  SDL+G   E+DEE+ + S       SEEEDR
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDS-------SEEEDR 160

[Close]

BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A6J1C5J6 (uncharacterized protein LOC111008596 OS=Momordica charantia OX=3673 GN=LOC111008596 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT
Sbjct: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
           NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR
Sbjct: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 167
           QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR
Sbjct: 121 QRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 166

[Close]

BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A6J1E804 (uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC111431572 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46
Identity = 113/167 (67.66%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RA+W AVF   +R VSISP LQT  SG     F+V  S Q RCYSS NDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFTACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
            +N  S+VDDDVS EELKRKID+FYEGDVESLP+IFEAILKRKLSGKH  ADDELMKEIR
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIR 120

Query: 121 QRMPGQMEDFKDDECASDLNG-FEETDEEIDDFSHARDSSDSEEEDR 167
           QR+PG++EDFKD+E  SDL+G   E+DEE+ + S       SEEEDR
Sbjct: 121 QRVPGEVEDFKDEEYDSDLSGELNESDEEMKEDS-------SEEEDR 160

[Close]

BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A6J1KP40 (uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44
Identity = 112/167 (67.07%), Postives = 126/167 (75.45%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RA+W AVF   +R VSI P LQT  SG     F+V  S Q RCYSS NDKYNGLNSTT
Sbjct: 1   MKRAIWGAVFAACSRRVSIPPLLQTLRSGPLLPPFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIR 120
            +N  S+VDD VS EELKRKID+FYEGDVESLP+IFEAILKRKLSGKH  ADDELMKEI 
Sbjct: 61  IENKDSLVDDYVSNEELKRKIDRFYEGDVESLPTIFEAILKRKLSGKHGDADDELMKEIL 120

Query: 121 QRMPGQMEDFKDDECASDLNG-FEETDEEIDDFSHARDSSDSEEEDR 167
           QRMPG++EDFKD+E  SDL+G   ETDEE+++ S       SEEEDR
Sbjct: 121 QRMPGEVEDFKDEEYDSDLSGDLNETDEEMEEDS-------SEEEDR 160

[Close]

BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A5D3BIA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002170 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.1e-39
Identity = 106/167 (63.47%), Postives = 124/167 (74.25%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RALW AVFNV +R++S+SPPL+T  S    + F+V      RCYSS NDKYN LNST 
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTL---RCYSSGNDKYNELNSTK 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYE-GDVESLPSIFEAILKRKLSGKHEGADDELMKEI 120
           N++  S+VDDDVSTEELKRKIDKFYE GD +SLP IFEAILKRKLSGKHE ADDELMKEI
Sbjct: 61  NKD--SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEI 120

Query: 121 RQRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 167
           RQRMPG++EDFK +E  S+L     TD+          +SDSEEED+
Sbjct: 121 RQRMPGEIEDFKGEEYDSEL-----TDDA---------ASDSEEEDK 148

[Close]

BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A1S3CEX3 (uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.1e-39
Identity = 106/167 (63.47%), Postives = 124/167 (74.25%), Query Frame = 0


Query: 1   MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTT 60
           M RALW AVFNV +R++S+SPPL+T  S    + F+V      RCYSS NDKYN LNST 
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTL---RCYSSGNDKYNELNSTK 60

Query: 61  NQNDHSVVDDDVSTEELKRKIDKFYE-GDVESLPSIFEAILKRKLSGKHEGADDELMKEI 120
           N++  S+VDDDVSTEELKRKIDKFYE GD +SLP IFEAILKRKLSGKHE ADDELMKEI
Sbjct: 61  NKD--SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEI 120

Query: 121 RQRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR 167
           RQRMPG++EDFK +E  S+L     TD+          +SDSEEED+
Sbjct: 121 RQRMPGEIEDFKGEEYDSEL-----TDDA---------ASDSEEEDK 148

[Close]

BLAST of MS021661 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 51/142 (35.92%), Postives = 83/142 (58.45%), Query Frame = 0


Query: 12  VYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTTNQND-HSVVDD 71
           + +  +S + P  TP +   P +F   +S      S +N      +S T+ +D   +V +
Sbjct: 17  ILSSRISPNVPFLTPIAAPAPPKFRFFSS-----ESGENSTTATESSPTDSSDKKDLVVE 76

Query: 72  DVSTEELKRKIDK-FYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQRMPGQMED 131
           DVS +ELK +IDK F EG+ ++LP + EA+L+R+L  KH   DDELM++I + +P + +D
Sbjct: 77  DVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELMEKI-ESLPFK-DD 136

Query: 132 FKDDECASDLNGFEETDEEIDD 152
            KD++  SD      TDEE++D
Sbjct: 137 VKDEDFESDFEEAHSTDEELED 151

[Close]

BLAST of MS021661 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11
Identity = 52/149 (34.90%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 14  ARSVSISPPLQTPCSGHFPARFAVLASLQP--RCYSSKNDKYNGLNSTT--------NQN 73
           AR + +SP +    S + P    + A   P  R +SS+    +G NSTT        +  
Sbjct: 13  ARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSE----SGENSTTAPESSPTDSPE 72

Query: 74  DHSVVDDDVSTEELKRKIDKFY-EGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQR 133
              +V +DVS +ELK +I+K++ EG+ ++LP + EA+L+R+L  KH   DDEL+++I + 
Sbjct: 73  KKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ES 132

Query: 134 MPGQMEDFKDDECASDLNGFEETDEEIDD 152
           +P + +D KD++  SD      TDEE++D
Sbjct: 133 LPFK-DDVKDEDFESDFEEAHSTDEELED 155

[Close]

BLAST of MS021661 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11
Identity = 52/149 (34.90%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 14  ARSVSISPPLQTPCSGHFPARFAVLASLQP--RCYSSKNDKYNGLNSTT--------NQN 73
           AR + +SP +    S + P    + A   P  R +SS+    +G NSTT        +  
Sbjct: 13  ARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSE----SGENSTTAPESSPTDSPE 72

Query: 74  DHSVVDDDVSTEELKRKIDKFY-EGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQR 133
              +V +DVS +ELK +I+K++ EG+ ++LP + EA+L+R+L  KH   DDEL+++I + 
Sbjct: 73  KKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ES 132

Query: 134 MPGQMEDFKDDECASDLNGFEETDEEIDD 152
           +P + +D KD++  SD      TDEE++D
Sbjct: 133 LPFK-DDVKDEDFESDFEEAHSTDEELED 155

[Close]

BLAST of MS021661 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 30  HFPARFAVLASLQPR----CYSSKNDKYNGLNSTTNQNDHSVVDDDVSTEELKRKIDKFY 89
           H PA F  L    PR     +     ++   +S ++ +     ++ +S EELK++I  F 
Sbjct: 18  HSPANFRHLRINNPRVVVPLFERAISRFVFFSSESDSSRGFRTEEVLSKEELKKRIQSFL 77

Query: 90  -EGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQRMPGQME--DFKDDECASDLNG- 149
            +G+ +++P +FEA++ RKLSGKH+ +DDE+M  +R+         D  D +  SD +G 
Sbjct: 78  DDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGD 137

Query: 150 FEETDEEIDDFSHARDSSDSEEE 165
             ++D E DD     DSSDS+ E
Sbjct: 138 SSDSDIESDDLRDG-DSSDSDVE 159

[Close]

BLAST of MS021661 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 30  HFPARFAVLASLQPR----CYSSKNDKYNGLNSTTNQNDHSVVDDDVSTEELKRKIDKFY 89
           H PA F  L    PR     +     ++   +S ++ +     ++ +S EELK++I  F 
Sbjct: 18  HSPANFRHLRINNPRVVVPLFERAISRFVFFSSESDSSRGFRTEEVLSKEELKKRIQSFL 77

Query: 90  -EGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQRMPGQME--DFKDDECASDLNG- 149
            +G+ +++P +FEA++ RKLSGKH+ +DDE+M  +R+         D  D +  SD +G 
Sbjct: 78  DDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGD 137

Query: 150 FEETDEEIDDFSHARDSSDSEEE 165
             ++D E DD     DSSDS+ E
Sbjct: 138 SSDSDIESDDLRDG-DSSDSDVE 159

The following BLAST results are available for this feature:

BLAST of MS021661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137035.1	3.5e-85	100.00	uncharacterized protein LOC111008596 [Momordica charantia]	[more]
XP_023519890.1	3.2e-46	67.66	uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]	[more]
KAG7019929.1	7.2e-46	67.07	hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022924024.1	7.2e-46	67.66	uncharacterized protein LOC111431572 [Cucurbita moschata]	[more]
KAG6584340.1	1.6e-45	67.07	hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS021661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS021661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5J6	1.7e-85	100.00	uncharacterized protein LOC111008596 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1E804	3.5e-46	67.66	uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A6J1KP40	1.1e-44	67.07	uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236...	[more]
A0A5D3BIA4	4.1e-39	63.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEX3	4.1e-39	63.47	uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=...	[more]

BLAST of MS021661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21460.1	3.3e-12	35.92	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.1	1.6e-11	34.90	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.2	1.6e-11	34.90	Ribosomal protein S24/S35, mitochondrial	[more]
AT1G73770.1	1.2e-06	32.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G73770.2	1.2e-06	32.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021661.1	MS021661.1	mRNA