![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS021661 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCGAGCTCTATGGAGAGCTGTCTTCAATGTCTATGCTCGGAGCGTTTCCATCTCTCCTCCCCTTCAAACCCCGTGCTCCGGTCACTTTCCGGCTCGATTTGCCGTTTTGGCTTCCCTCCAACCGCGATGTTACTCATCCAAGAATGACAAGTACAATGGATTGAACTCAACCACGAATCAGAACGATCATTCTGTCGTCGACGATGATGTCAGTACCGAAGGTAAACAAATATGAAAGTTGTTTGTCAATTTTGTTTGTTTTGTTTAGCAATTCTGAGAAGAAGAAAATTTTCAAAATCTTAAGTGGAATTTTGGGATTTATTTATTTATTTTTATTATTTACGGATAATCGAGATTGTTGATGGTAATATTTTGTATGAGTTTCTACTCCAACGTTTGGTTATGAATATGATTTTTTATAACTTTTGCCTAAACTTGCAAAGAAATTTTGGGTGCTGAGTTCTACTCTTGTATTTCAAATCACGAGTCATTTAAAGTCTTATATTCATGTTGGAGATAATTGGGAAGTTCAAGTCGAAAGATTTTTTGCACTTTTCGTTTTCATTTCGTGAAATGATGGTTTTTATCTACTTGACATGATAATTGCCAATCTTAAGATTCGTGTACAGTTTTTGTCATTTTGTTAAAATATGGAGTTAATGAGTTGGTATTAGTTTAGCATAATATTTGACTTGAAGTTGAAGATTTTGAGTAATCTCTGGCTTATGTCCGGTGTAATTTAAACGATTCAATTCAGTGACATTAGCAGCTTAACATTAGATACGTTTGGAACTGTTGTTAAAGAAATGCTTTTATCAAAATTCTTTTATGATAAGGACTTTAACATAAAGTGTAATAAAAATTCATTCTGTTTGTTGGTTCTAATATATTAAAAGTGCTTTTAAGCGAAGTAAAGATCTTTTTTGAATTGAGCATTATTTTAGGGAATCATGTGAAAATAATAAAAATTGCAAGAGTATGTTTAGATAGAAATTAGTGAGAGAGAAGAAGTATGTAGGTAAAGAGGAATTGTAGCGAATGCCAAACACAAACAATTTAGGTTGAAAATGTTAACCTATAAATAGCACAATTGGTTAAAGCATAGATTCAGATTTGAATCTTCACTCTCACATATTGTTGAACACAAACAAAAAACACTTTTGTACATGCCTAAAGATGTTTCAAATCTGTTCACTGCCATGAAGCTAGTTGTTAATTCAGATTAATTTTTTATGATATGATTAATTTTCATTAAAAGGAAAAGAAATCAACAGACATTGTCATCTTATTCACCAGTGGTTCTGAGTTTCTAGCTTCGTAGCCCATGTGTGATTTTGGAGTTAATACTGCAAGTTTCTGTGATTGCAGAGCTGAAGAGGAAGATAGATAAATTTTACGAGGGTGATGTCGAGTCATTACCATCGATATTTGAAGCAATTTTGAAGAGGAAGCTGTCAGGAAAACACGAAGGTGCTGATGATGAGCTTATGAAAGAAATTCGGCAGCGAATGCCTGGACAAATGGAAGATTTTAAAGATGATGAATGTGCATCTGATTTAAACGGGTTTGAGGAAACTGATGAAGAAATAGATGATTTCAGTCATGCCAGAGATTCGAGTGATTCTGAGGAAGAAGATAGA ATGAATCGAGCTCTATGGAGAGCTGTCTTCAATGTCTATGCTCGGAGCGTTTCCATCTCTCCTCCCCTTCAAACCCCGTGCTCCGGTCACTTTCCGGCTCGATTTGCCGTTTTGGCTTCCCTCCAACCGCGATGTTACTCATCCAAGAATGACAAGTACAATGGATTGAACTCAACCACGAATCAGAACGATCATTCTGTCGTCGACGATGATGTCAGTACCGAAGAGCTGAAGAGGAAGATAGATAAATTTTACGAGGGTGATGTCGAGTCATTACCATCGATATTTGAAGCAATTTTGAAGAGGAAGCTGTCAGGAAAACACGAAGGTGCTGATGATGAGCTTATGAAAGAAATTCGGCAGCGAATGCCTGGACAAATGGAAGATTTTAAAGATGATGAATGTGCATCTGATTTAAACGGGTTTGAGGAAACTGATGAAGAAATAGATGATTTCAGTCATGCCAGAGATTCGAGTGATTCTGAGGAAGAAGATAGA ATGAATCGAGCTCTATGGAGAGCTGTCTTCAATGTCTATGCTCGGAGCGTTTCCATCTCTCCTCCCCTTCAAACCCCGTGCTCCGGTCACTTTCCGGCTCGATTTGCCGTTTTGGCTTCCCTCCAACCGCGATGTTACTCATCCAAGAATGACAAGTACAATGGATTGAACTCAACCACGAATCAGAACGATCATTCTGTCGTCGACGATGATGTCAGTACCGAAGAGCTGAAGAGGAAGATAGATAAATTTTACGAGGGTGATGTCGAGTCATTACCATCGATATTTGAAGCAATTTTGAAGAGGAAGCTGTCAGGAAAACACGAAGGTGCTGATGATGAGCTTATGAAAGAAATTCGGCAGCGAATGCCTGGACAAATGGAAGATTTTAAAGATGATGAATGTGCATCTGATTTAAACGGGTTTGAGGAAACTGATGAAGAAATAGATGATTTCAGTCATGCCAGAGATTCGAGTGATTCTGAGGAAGAAGATAGA MNRALWRAVFNVYARSVSISPPLQTPCSGHFPARFAVLASLQPRCYSSKNDKYNGLNSTTNQNDHSVVDDDVSTEELKRKIDKFYEGDVESLPSIFEAILKRKLSGKHEGADDELMKEIRQRMPGQMEDFKDDECASDLNGFEETDEEIDDFSHARDSSDSEEEDR Homology
BLAST of MS021661 vs. NCBI nr
Match: XP_022137035.1 (uncharacterized protein LOC111008596 [Momordica charantia]) HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of MS021661 vs. NCBI nr
Match: XP_023519890.1 (uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.7 bits (496), Expect = 3.2e-46 Identity = 113/167 (67.66%), Postives = 129/167 (77.25%), Query Frame = 0
BLAST of MS021661 vs. NCBI nr
Match: KAG7019929.1 (hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.5 bits (493), Expect = 7.2e-46 Identity = 112/167 (67.07%), Postives = 128/167 (76.65%), Query Frame = 0
BLAST of MS021661 vs. NCBI nr
Match: XP_022924024.1 (uncharacterized protein LOC111431572 [Cucurbita moschata]) HSP 1 Score: 194.5 bits (493), Expect = 7.2e-46 Identity = 113/167 (67.66%), Postives = 128/167 (76.65%), Query Frame = 0
BLAST of MS021661 vs. NCBI nr
Match: KAG6584340.1 (hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45 Identity = 112/167 (67.07%), Postives = 128/167 (76.65%), Query Frame = 0
BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A6J1C5J6 (uncharacterized protein LOC111008596 OS=Momordica charantia OX=3673 GN=LOC111008596 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A6J1E804 (uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC111431572 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46 Identity = 113/167 (67.66%), Postives = 128/167 (76.65%), Query Frame = 0
BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A6J1KP40 (uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44 Identity = 112/167 (67.07%), Postives = 126/167 (75.45%), Query Frame = 0
BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A5D3BIA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002170 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 4.1e-39 Identity = 106/167 (63.47%), Postives = 124/167 (74.25%), Query Frame = 0
BLAST of MS021661 vs. ExPASy TrEMBL
Match: A0A1S3CEX3 (uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 4.1e-39 Identity = 106/167 (63.47%), Postives = 124/167 (74.25%), Query Frame = 0
BLAST of MS021661 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12 Identity = 51/142 (35.92%), Postives = 83/142 (58.45%), Query Frame = 0
BLAST of MS021661 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 52/149 (34.90%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of MS021661 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 52/149 (34.90%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of MS021661 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06 Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of MS021661 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06 Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|