MS021644 (gene) Bitter gourd (TR) v1

Overview


Name	MS021644
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cleavage stimulating factor 64
Location	scaffold348: 14143 .. 17420 (+)
RNA-Seq Expression	MS021644
Synteny	MS021644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGAAAGCAAGTTGCTGGCACCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAATCAACTCTATGATATCATGTCTCAAATGAAGGTACCTTGTTTTTTTTCTATTTTCTTGGAATCGATATTGCTCCGTCCCCCTTTTCTTCATCCTGAATTCGGTTTGTCTCCGAGCAATGTCTAGACAGCGGAGGTATAATTGGTGTTGTGTTTATTTTTGTGCAGACACTGATTGAACAGAATCAGCAGCAGGCGAAACAAATTCTCATCCAAAATCCGCTCTTGACCAAAGCTCTTTTCCAGGTTTCAATTTTTAGGTTTTTCGTGTCCTGAGTAAAGCTCTTTTACTTAACTGTGTGGAGCTTGCCCTGTTAATCTTGTCTTTGAAGAGTTTGAACAATTAGGGTTTTCCCATGAAACAGGGTTTGTATAATTGCAAGTACGGCAAGGAAATCGAATACGATATAGTAATGTATGATTGTATACACAATCTTTTACGAGGTTTAATTTTAATAATTAATTAACTTGAAGCTGTTGGATCATTTCCTTGAACGAATGGATTGATCTATTCCGGTTGAAATCTAACTAATTTGGGAGTATCTCTCTATCTTTCCAAATTGCTCTGCAAGGACGTGTAATCTCAAAGACGAGAAAAGTAGTCTGGAACATGAGTTTTCTTCTTATTACCTCCTTGGAGACAGCATATACTGTCAAATTGTATGGCCTATTGCAAGTGCCAACTTTAAACGCTAAATTCTAGTTCCGAGCAGGAGCAAGTGTTATTAATAACAGTAATTTATTCTCTAGGGTACTTTGAGTTATATGGTTAATAGCGTGGAACCCTTGTTACTAATTGATCTGCTCATTTAGAGGTTTTACCTTTAGTTTCTCATTTTGTTAGTGAAAATGTTATTGATTCTACTGTTTTTATCTACCAGGCGCAGATTATGCTTGGGATGGTTAGGCCTCCTCAGGTAGTACGCTAGTTATCCTCTCTCTTTTTTTCCTGCATTTTTCTAAAGTTATTTTTCGGTTTAGATTCCAAGCATCCAGCCTTCAACCTCGCAGCATTCTCAGCCATCAACACATACAACTCATCAGTCAAATATTCAGCCTACTCAAACACCAGCAGGTCAAATAAGTTTGCAAGAACAAACGAATGCACCACCATTGGCCCCTCCTAGAAAACAATATCAGAATCCACCATCAATGCCTATCTCATCAACTACTCTTCCTACAGTGAACGTTCAGCCTCAGTCAGCACCTCTGATTCCCCTGCAGACACCACAGCATCCCAAGGGATTTGAGATGCACCAAGCAAATCCCATTTCTGTTCCACAACCCTCTCAAGTTCCAAGCGTACCTCCAGTTCTACCGTCTGCTGCACAGCCACCTTTACTTCATCAACCCCAGATTTCAACTGCTTCCGTACAGCTGCAGCAGCCATTACAAACAGCTGAAATTCCCCACCTGCCACTACAGGCACCACTACCCCCACAGTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCAACAAATGGGGCACAATATGAATTACCAACCTGCCGGCATCCCACAGCATGTTTCACAGCCCATGTTTCATGTAGGTCAGAGTTTTAGTTTTCAAGTTACAATTCTCCTTTGGATTTACAATACACAAATCTCCAGACAAAAATTATTTCTCAACCTCTCTTGTCTATTTTTTAACGTTCTAGTCAGGTACCAAACTTCCTCCTGGTATAGGAAATTCATTTCCCCCTCAAGCACAGTCAGCAGTTCCTAGTCAGCCACCCCCTCAATCATTGTATCAGGTACCTTTTTCTTTATTTACTGAATTAGGATGTGTTTATCTTGCATATACTAGATCAGTTGAGTTCTTACGAGGCTGGTGAGGCCTGACAGGAGCATGGGCTTCTTTCTTTCAATTGGCTTTGAGGTAGATTTATCGACTTCCTGCCCGAGTACACTGTTGAAGTGCTGTTTCAACTTCAATCTTAATCATGATTCATGCTGTATGCCTATCTTGAGCCCCTGACTATTCTGTTCAGTATAGCTGCTGGACTGTTAATCATGGATAATAATATTGCTATAAATAATACAGTTTTCTTATGTAACTCTGTTGAGGCTAAATATAAATAGATTAGACTTTGATTAGATTCCAATGTTATGTGATTTTTTCTTTTCCAAATTTTATTTACCAATAATGGTTAAGTAGTATAGACTGGTGTAAGTATTGCAGACCCACCATACCAGTGGAATATACTTGTAGGTTCTTGGTATTATTTGTGTTTGCATTTGCCTGAAATGGACGCAGTTATCTTTTTAGATTTCAGGCATAACCCTGGAATGCATCAAGACGTTAGATGATGGAACCTGGGTTGCTCAAAAGAAAACAGCCGCAGTCATGCTGTTTGATCTTTTTTTAACCTTTTGTATGTTGTAAATATTCTCATAGGTTTCCTTCTCATGAGAATTGATGGAATAAGGAGTTTCAAATCCTTCAATCTCAATCTTGAATGGTTCTCTATTGAGTTTCATATATAGCTTTGGTTAATATGATAGGTGAGTGAGTACGCATTGGACTTTGGAGCTTACAGAGTCCTAAATTTTAACAGCTCAAAAGTTCAATAGGAGTGGCTTTAATTGTTCAGTCATGTGCCGTTATTGCAATTGTACTTTCTTTTGCCAACTATAGTTCTTAGTCATCATAAGAAATTGGACTTGTTTTAGACAAGCAGGTCTTGACTTTGAGCATGCCAGCTACTTTTAGAGCAAATTATTAAAGCCAGTAGAGAACAATTTATCAAATAACCACAGTATTAGCTGTTTAATGTCTCGCTTGGTGCATATTTCTCTCAGGCTGGAGGTTCTAAATTAGGTACAGAGTTCATGAATCAAGTTGGAACTTCAAAGCCTGCAGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCTACACTACCACAGCAGCTCTCCGGACCACCACCATCAGTCCCTGGTCAGATGGGCCCTGGCAATCAGCCTCGTCCTGCACCACCGGTACCGTTCTAGTGACTCTTTATTTCTGTTTGGAATAACATTATCTTATTTTCATCTTTTGCGATTGACTCCTTACCCACTCTCGGGGTTTCTCCTTCAGTTGAGCCAAGAAATGGAGAAGATGCTACTTCAACAAGTCATGAGTCTCACACCGGAACAAATCAATCTCCTGCCTCCAGAGCAAAGAAATCAAGTATTTCAACTACAGAAGATACTGCGCCAA

mRNA sequence

ATGGCGGGAAAGCAAGTTGCTGGCACCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAATCAACTCTATGATATCATGTCTCAAATGAAGACACTGATTGAACAGAATCAGCAGCAGGCGAAACAAATTCTCATCCAAAATCCGCTCTTGACCAAAGCTCTTTTCCAGGCGCAGATTATGCTTGGGATGGTTAGGCCTCCTCAGGTAATTCCAAGCATCCAGCCTTCAACCTCGCAGCATTCTCAGCCATCAACACATACAACTCATCAGTCAAATATTCAGCCTACTCAAACACCAGCAGGTCAAATAAGTTTGCAAGAACAAACGAATGCACCACCATTGGCCCCTCCTAGAAAACAATATCAGAATCCACCATCAATGCCTATCTCATCAACTACTCTTCCTACAGTGAACGTTCAGCCTCAGTCAGCACCTCTGATTCCCCTGCAGACACCACAGCATCCCAAGGGATTTGAGATGCACCAAGCAAATCCCATTTCTGTTCCACAACCCTCTCAAGTTCCAAGCGTACCTCCAGTTCTACCGTCTGCTGCACAGCCACCTTTACTTCATCAACCCCAGATTTCAACTGCTTCCGTACAGCTGCAGCAGCCATTACAAACAGCTGAAATTCCCCACCTGCCACTACAGGCACCACTACCCCCACAGTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCAACAAATGGGGCACAATATGAATTACCAACCTGCCGGCATCCCACAGCATGTTTCACAGCCCATGTTTCATGTAGGTACCAAACTTCCTCCTGGTATAGGAAATTCATTTCCCCCTCAAGCACAGTCAGCAGTTCCTAGTCAGCCACCCCCTCAATCATTGTATCAGGCTGGAGGTTCTAAATTAGGTACAGAGTTCATGAATCAAGTTGGAACTTCAAAGCCTGCAGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCTACACTACCACAGCAGCTCTCCGGACCACCACCATCAGTCCCTGGTCAGATGGGCCCTGGCAATCAGCCTCGTCCTGCACCACCGTTGAGCCAAGAAATGGAGAAGATGCTACTTCAACAAGTCATGAGTCTCACACCGGAACAAATCAATCTCCTGCCTCCAGAGCAAAGAAATCAAGTATTTCAACTACAGAAGATACTGCGCCAA

Coding sequence (CDS)

ATGGCGGGAAAGCAAGTTGCTGGCACCGGTCTGCCGGAGAGCATCGCAGGAATGTCGAAGAATCAACTCTATGATATCATGTCTCAAATGAAGACACTGATTGAACAGAATCAGCAGCAGGCGAAACAAATTCTCATCCAAAATCCGCTCTTGACCAAAGCTCTTTTCCAGGCGCAGATTATGCTTGGGATGGTTAGGCCTCCTCAGGTAATTCCAAGCATCCAGCCTTCAACCTCGCAGCATTCTCAGCCATCAACACATACAACTCATCAGTCAAATATTCAGCCTACTCAAACACCAGCAGGTCAAATAAGTTTGCAAGAACAAACGAATGCACCACCATTGGCCCCTCCTAGAAAACAATATCAGAATCCACCATCAATGCCTATCTCATCAACTACTCTTCCTACAGTGAACGTTCAGCCTCAGTCAGCACCTCTGATTCCCCTGCAGACACCACAGCATCCCAAGGGATTTGAGATGCACCAAGCAAATCCCATTTCTGTTCCACAACCCTCTCAAGTTCCAAGCGTACCTCCAGTTCTACCGTCTGCTGCACAGCCACCTTTACTTCATCAACCCCAGATTTCAACTGCTTCCGTACAGCTGCAGCAGCCATTACAAACAGCTGAAATTCCCCACCTGCCACTACAGGCACCACTACCCCCACAGTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCAACAAATGGGGCACAATATGAATTACCAACCTGCCGGCATCCCACAGCATGTTTCACAGCCCATGTTTCATGTAGGTACCAAACTTCCTCCTGGTATAGGAAATTCATTTCCCCCTCAAGCACAGTCAGCAGTTCCTAGTCAGCCACCCCCTCAATCATTGTATCAGGCTGGAGGTTCTAAATTAGGTACAGAGTTCATGAATCAAGTTGGAACTTCAAAGCCTGCAGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCTACACTACCACAGCAGCTCTCCGGACCACCACCATCAGTCCCTGGTCAGATGGGCCCTGGCAATCAGCCTCGTCCTGCACCACCGTTGAGCCAAGAAATGGAGAAGATGCTACTTCAACAAGTCATGAGTCTCACACCGGAACAAATCAATCTCCTGCCTCCAGAGCAAAGAAATCAAGTATTTCAACTACAGAAGATACTGCGCCAA

Protein sequence

MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ

Homology

[Close]

BLAST of MS021644 vs. NCBI nr
Match: XP_022137043.1 (RNA-binding protein 33 isoform X2 [Momordica charantia])

HSP 1 Score: 745.3 bits (1923), Expect = 2.6e-211
Identity = 390/396 (98.48%), Postives = 392/396 (98.99%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSIQPSTSHHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP
Sbjct: 121 QYQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ
Sbjct: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Sbjct: 241 VGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of MS021644 vs. NCBI nr
Match: XP_022137042.1 (RNA-binding protein 33 isoform X1 [Momordica charantia])

HSP 1 Score: 743.0 bits (1917), Expect = 1.3e-210
Identity = 389/396 (98.23%), Postives = 391/396 (98.74%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSIQPSTSHHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP
Sbjct: 121 QYQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ
Sbjct: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Sbjct: 241 VGHNMNYQPAGIPQHVSQPMFHSGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of MS021644 vs. NCBI nr
Match: XP_022137044.1 (RNA-binding protein 33 isoform X3 [Momordica charantia])

HSP 1 Score: 716.5 bits (1848), Expect = 1.3e-202
Identity = 377/396 (95.20%), Postives = 379/396 (95.71%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPP              QPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK
Sbjct: 61  MLGMVRPP--------------QPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP
Sbjct: 121 QYQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ
Sbjct: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Sbjct: 241 VGHNMNYQPAGIPQHVSQPMFHSGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 382

[Close]

BLAST of MS021644 vs. NCBI nr
Match: XP_023519984.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 7.7e-187
Identity = 351/398 (88.19%), Postives = 369/398 (92.71%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV GTGLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYEIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPS+ PS SQHSQPSTHTT QSNIQPTQT A QI+LQEQT+ PPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSVHPSASQHSQPSTHTTQQSNIQPTQTSAAQINLQEQTSTPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP
Sbjct: 121 QYQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPNSAPQPSQIPNVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           +LPSAAQPPLLHQPQISTAS+QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP Q
Sbjct: 181 ILPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           MGHNMNYQP GIPQHVSQP+FH GTKLPPG+GNSFPP  QSA+PSQPPPQS+YQAGGSKL
Sbjct: 241 MGHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPP-GQSALPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQ 360
           GTEFMNQVG+SKPADRGPWMPGPPENPT PQQL+GPP  PSV GQM PGNQPR APPLSQ
Sbjct: 301 GTEFMNQVGSSKPADRGPWMPGPPENPTHPQQLAGPPPIPSVLGQMAPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MS021644 vs. NCBI nr
Match: XP_022924107.1 (proline-rich protein 36-like [Cucurbita moschata])

HSP 1 Score: 664.1 bits (1712), Expect = 7.7e-187
Identity = 352/398 (88.44%), Postives = 368/398 (92.46%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV GTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPS+ PS SQHSQP THTT QSNIQPTQT A QISLQEQT+ PPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP
Sbjct: 121 QYQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           +LPSAAQPPLLHQPQISTAS+QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP Q
Sbjct: 181 ILPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQP GIPQHVSQP+FH GTKLPPG+GNSFPP  QSA+PSQP PQS+YQAGGSKL
Sbjct: 241 IGHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPP-GQSALPSQPAPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQ 360
           GTEFMNQVG+SKPADRGPWMPGPPENPT PQQLSGPP  PSV GQMGPGNQPR APPLSQ
Sbjct: 301 GTEFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MS021644 vs. ExPASy Swiss-Prot
Match: Q9M9G6 (Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.9e-08
Identity = 107/383 (27.94%), Postives = 153/383 (39.95%), Query Frame = 0


Query: 15  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSI 74
           +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V  PQV+ S 
Sbjct: 171 LAKMSRSQLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIV-SPQVLQS- 230

Query: 75  QPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTT 134
                   Q  +H T  S+IQ  Q       L  Q   PPLA   +Q    P    S   
Sbjct: 231 ----PNIVQAPSHMT-GSSIQDAQ-------LSGQNLLPPLAQRSQQLSRAPH---SQYP 290

Query: 135 LPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQP 194
           +   + QP S      Q PQ              V QP          PS+  PP   Q 
Sbjct: 291 VQQSSKQPFS------QIPQ-------------LVAQPG---------PSSVNPPPRSQV 350

Query: 195 QISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPA-GIP 254
           ++  A  Q QQ +  +                                 N+ Y     +P
Sbjct: 351 KVENAPFQRQQVVPAST--------------------------------NIGYSSQNSVP 410

Query: 255 QHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKP 314
            +  QP                     S VP Q  P S+ Q GG  +   F  ++    P
Sbjct: 411 NNAIQP---------------------SQVPHQALPNSVMQQGGQTVSLNFGKRINEG-P 454

Query: 315 ADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTP 374
             +    P         +  S P   V   M P     P   +S +++  LLQQVM+LTP
Sbjct: 471 PHQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQSTLLQQVMNLTP 454

Query: 375 EQINLLPPEQRNQVFQLQKILRQ 397
           EQ+ LL PEQ+ +V +LQ+ L+Q
Sbjct: 531 EQLRLLTPEQQQEVLKLQQALKQ 454

[Close]

BLAST of MS021644 vs. ExPASy TrEMBL
Match: A0A6J1C968 (RNA-binding protein 33 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008603 PE=4 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 1.3e-211
Identity = 390/396 (98.48%), Postives = 392/396 (98.99%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSIQPSTSHHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP
Sbjct: 121 QYQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ
Sbjct: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Sbjct: 241 VGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of MS021644 vs. ExPASy TrEMBL
Match: A0A6J1C742 (RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603 PE=4 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 6.3e-211
Identity = 389/396 (98.23%), Postives = 391/396 (98.74%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPSIQPSTS HSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSIQPSTSHHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP
Sbjct: 121 QYQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ
Sbjct: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Sbjct: 241 VGHNMNYQPAGIPQHVSQPMFHSGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 395

[Close]

BLAST of MS021644 vs. ExPASy TrEMBL
Match: A0A6J1C620 (RNA-binding protein 33 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008603 PE=4 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 6.3e-203
Identity = 377/396 (95.20%), Postives = 379/396 (95.71%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPP              QPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK
Sbjct: 61  MLGMVRPP--------------QPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP
Sbjct: 121 QYQNQPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ
Sbjct: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQPAGIPQHVSQPMFH GTKLPPGIGNSFPPQ QSAVPSQPPPQS+YQAGGSKL
Sbjct: 241 VGHNMNYQPAGIPQHVSQPMFHSGTKLPPGIGNSFPPQGQSAVPSQPPPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360
           GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM
Sbjct: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEM 360

Query: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ
Sbjct: 361 EKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 382

[Close]

BLAST of MS021644 vs. ExPASy TrEMBL
Match: A0A6J1E818 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.7e-187
Identity = 352/398 (88.44%), Postives = 368/398 (92.46%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV GTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVTGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQ IPS+ PS SQHSQP THTT QSNIQPTQT A QISLQEQT+ PPLAPPRK
Sbjct: 61  MLGMVRPPQ-IPSVHPSASQHSQPPTHTTQQSNIQPTQTSAAQISLQEQTSTPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMP+SSTTLPT N+QP+SAPLIPLQTPQHPKGF+M QANP S PQPSQ+P+VPP
Sbjct: 121 QYQNQPSMPVSSTTLPTTNIQPRSAPLIPLQTPQHPKGFDMPQANPSSAPQPSQIPNVPP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           +LPSAAQPPLLHQPQISTAS+QLQQPLQTAEIPHLP  APLP  SRAPTGPNFHQHYP Q
Sbjct: 181 ILPSAAQPPLLHQPQISTASIQLQQPLQTAEIPHLPPPAPLPSHSRAPTGPNFHQHYPPQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKL 300
           +GHNMNYQP GIPQHVSQP+FH GTKLPPG+GNSFPP  QSA+PSQP PQS+YQAGGSKL
Sbjct: 241 IGHNMNYQPPGIPQHVSQPIFHSGTKLPPGMGNSFPP-GQSALPSQPAPQSMYQAGGSKL 300

Query: 301 GTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVPGQMGPGNQPRPAPPLSQ 360
           GTEFMNQVG+SKPADRGPWMPGPPENPT PQQLSGPP  PSV GQMGPGNQPR APPLSQ
Sbjct: 301 GTEFMNQVGSSKPADRGPWMPGPPENPTHPQQLSGPPPIPSVLGQMGPGNQPRAAPPLSQ 360

Query: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 361 EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 396

[Close]

BLAST of MS021644 vs. ExPASy TrEMBL
Match: A0A1S3C700 (extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.4e-186
Identity = 356/400 (89.00%), Postives = 370/400 (92.50%), Query Frame = 0


Query: 1   MAGKQVAGTGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60
           MAGKQV+G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI
Sbjct: 1   MAGKQVSGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQI 60

Query: 61  MLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRK 120
           MLGMVRPPQV PSIQPS SQHSQPST  T QSN+QPTQT A QISLQEQT+APPLAPPRK
Sbjct: 61  MLGMVRPPQV-PSIQPSASQHSQPSTQATQQSNLQPTQTSAPQISLQEQTSAPPLAPPRK 120

Query: 121 QYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPP 180
           QYQN PSMPISSTTLPT N+QP+  PLIPLQTPQHPKGF++ QANPISVPQPSQ+PSV P
Sbjct: 121 QYQNQPSMPISSTTLPTANIQPRPTPLIPLQTPQHPKGFDVPQANPISVPQPSQIPSVSP 180

Query: 181 VLPSAAQPPLLHQPQISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQ 240
           +LPSAAQPPLLHQPQISTAS+QLQQPLQTAE+ HLP QAPLPP SR PTGPNFHQHYP Q
Sbjct: 181 ILPSAAQPPLLHQPQISTASMQLQQPLQTAEVHHLPPQAPLPPHSRPPTGPNFHQHYPPQ 240

Query: 241 MGHNMNYQPAGIPQHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQ-PPPQSLYQAGGSK 300
           MGHNMNYQP GIPQHVSQPMFH GTKLPPG+GNSF PQ QS +PSQ PPPQS+YQAGGSK
Sbjct: 241 MGHNMNYQPPGIPQHVSQPMFHSGTKLPPGLGNSF-PQGQSGLPSQPPPPQSMYQAGGSK 300

Query: 301 LGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP--PSVP-GQMGPGNQPRPAPPL 360
           LGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPP  PSVP GQMGP NQPRPAPPL
Sbjct: 301 LGTEFMNQVGTSKPADRGPWMPGPPENPTLPQQLSGPPPIPSVPGGQMGPNNQPRPAPPL 360

Query: 361 SQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
           SQEMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Sbjct: 361 SQEMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ 398

[Close]

BLAST of MS021644 vs. TAIR 10
Match: AT1G73840.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-64
Identity = 194/410 (47.32%), Postives = 236/410 (57.56%), Query Frame = 0


Query: 1   MAGKQVAGT-GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQ 60
           MAGKQ+ G  GLP ++AGM+K+QLYDIMSQMKTLI+QN QQA++ILI+NPLLTKALFQAQ
Sbjct: 1   MAGKQIGGDGGLPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQ 60

Query: 61  IMLGMVRPPQVIPSIQPSTSQHSQPSTHTTHQS-----NIQPTQTP-AGQISLQEQTNAP 120
           IMLGMV+PPQV P ++P   Q  Q S    HQS     N+Q   +   G  S+ E  N  
Sbjct: 61  IMLGMVQPPQVTPKVEPQAVQQPQQS----HQSIPPKPNVQAHMSSFQGGGSVHEPANTM 120

Query: 121 PLAPPRKQYQNPPSMPISSTTLPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPS 180
               P +++  P  MP+     P  +V   SA   P  +    +G        +S PQ S
Sbjct: 121 QPQAPIRKHPTPQPMPMPP---PPPSVSANSAQSQPRFSHPQRQGHLNPAVTSMSHPQSS 180

Query: 181 QVPSVPPVL---PSAAQPPLLHQPQISTASVQL-QQPLQTAEIPHLPLQAPLPPQSRAPT 240
           QV + PP     P++ QPP  H   I  +S QL QQP+ +   PH+  Q     QSR   
Sbjct: 181 QVQNAPPPASHHPTSQQPP-FHHLDIPASSTQLQQQPMHSGGGPHVAQQ-----QSR--- 240

Query: 241 GPNFHQHYPQQMGHNMNYQPAGIP-QHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPP 300
            P  HQ+   Q G N  +Q  G P QH+SQPM+H G + PP  G    PQ Q  +PSQP 
Sbjct: 241 -PYHHQYGQAQTGPNTGFQHHGAPTQHLSQPMYHSGNR-PPASGGPQFPQGQPHLPSQP- 300

Query: 301 PQSLYQAGGSKLGTEFMNQVGTSKPADRGP-WMPGPPENPTLPQQLSGPPPSVPGQMGPG 360
               YQ GG   G    NQ+      DRGP WM G  E+  +       P   P Q+GPG
Sbjct: 301 ---TYQGGGQYRGDYNNNQLAGLMAQDRGPSWMAGQSESSNITHLPGLGPVPPPSQVGPG 360

Query: 361 NQPRPAP-PLSQEMEKMLLQQVMSLTPEQINLLPPEQRNQVFQLQKILRQ 397
             P P P P+S EMEK LLQQVMSLTPEQINLLPPEQRNQV QLQ+ILRQ
Sbjct: 361 GGPPPRPAPISAEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQILRQ 388

[Close]

BLAST of MS021644 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-09
Identity = 107/383 (27.94%), Postives = 153/383 (39.95%), Query Frame = 0


Query: 15  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQVIPSI 74
           +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V  PQV+ S 
Sbjct: 171 LAKMSRSQLTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIV-SPQVLQS- 230

Query: 75  QPSTSQHSQPSTHTTHQSNIQPTQTPAGQISLQEQTNAPPLAPPRKQYQNPPSMPISSTT 134
                   Q  +H T  S+IQ  Q       L  Q   PPLA   +Q    P    S   
Sbjct: 231 ----PNIVQAPSHMT-GSSIQDAQ-------LSGQNLLPPLAQRSQQLSRAPH---SQYP 290

Query: 135 LPTVNVQPQSAPLIPLQTPQHPKGFEMHQANPISVPQPSQVPSVPPVLPSAAQPPLLHQP 194
           +   + QP S      Q PQ              V QP          PS+  PP   Q 
Sbjct: 291 VQQSSKQPFS------QIPQ-------------LVAQPG---------PSSVNPPPRSQV 350

Query: 195 QISTASVQLQQPLQTAEIPHLPLQAPLPPQSRAPTGPNFHQHYPQQMGHNMNYQPA-GIP 254
           ++  A  Q QQ +  +                                 N+ Y     +P
Sbjct: 351 KVENAPFQRQQVVPAST--------------------------------NIGYSSQNSVP 410

Query: 255 QHVSQPMFHVGTKLPPGIGNSFPPQAQSAVPSQPPPQSLYQAGGSKLGTEFMNQVGTSKP 314
            +  QP                     S VP Q  P S+ Q GG  +   F  ++    P
Sbjct: 411 NNAIQP---------------------SQVPHQALPNSVMQQGGQTVSLNFGKRINEG-P 454

Query: 315 ADRGPWMPGPPENPTLPQQLSGPPPSVPGQMGPGNQPRPAPPLSQEMEKMLLQQVMSLTP 374
             +    P         +  S P   V   M P     P   +S +++  LLQQVM+LTP
Sbjct: 471 PHQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQSTLLQQVMNLTP 454

Query: 375 EQINLLPPEQRNQVFQLQKILRQ 397
           EQ+ LL PEQ+ +V +LQ+ L+Q
Sbjct: 531 EQLRLLTPEQQQEVLKLQQALKQ 454

The following BLAST results are available for this feature:

BLAST of MS021644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137043.1	2.6e-211	98.48	RNA-binding protein 33 isoform X2 [Momordica charantia]	[more]
XP_022137042.1	1.3e-210	98.23	RNA-binding protein 33 isoform X1 [Momordica charantia]	[more]
XP_022137044.1	1.3e-202	95.20	RNA-binding protein 33 isoform X3 [Momordica charantia]	[more]
XP_023519984.1	7.7e-187	88.19	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]
XP_022924107.1	7.7e-187	88.44	proline-rich protein 36-like [Cucurbita moschata]	[more]

BLAST of MS021644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G6	3.9e-08	27.94	Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV...	[more]

BLAST of MS021644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C968	1.3e-211	98.48	RNA-binding protein 33 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008603...	[more]
A0A6J1C742	6.3e-211	98.23	RNA-binding protein 33 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008603...	[more]
A0A6J1C620	6.3e-203	95.20	RNA-binding protein 33 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008603...	[more]
A0A6J1E818	3.7e-187	88.44	proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111431641 PE=4 ...	[more]
A0A1S3C700	1.4e-186	89.00	extensin OS=Cucumis melo OX=3656 GN=LOC103497597 PE=4 SV=1	[more]

BLAST of MS021644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73840.1	1.8e-64	47.32	hydroxyproline-rich glycoprotein family protein	[more]
AT1G71800.1	2.8e-09	27.94	cleavage stimulating factor 64	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026896	Transcription termination and cleavage factor, C-terminal domain	PFAM	PF14304	CSTF_C	coord: 364..393 e-value: 3.4E-9 score: 36.2
None	No IPR available	GENE3D	1.25.40.630		coord: 6..72 e-value: 6.4E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..138
None	No IPR available	PANTHER	PTHR47866	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 1..396
IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	GENE3D	1.10.20.70		coord: 356..396 e-value: 3.9E-12 score: 47.3
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 15..69 e-value: 2.3E-15 score: 56.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021644.1	MS021644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing