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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. TGGGGGATGAGAAAAAAAACTCAAAAATGGGGGAAAGCCCGAGTGGCGAGAGAGAGAGAAAAAGGGCGAGAAGAAACGGTTTTGGTGAGAGAAAAGGCGAGTACTTGTAGATGGGTATGCCATTTGTTGTACTTGGGGGTACTGTTCCGTTTCTCAAAGATATCTTGCGTTCTTGGCTTGGTGACCAACCG mRNA sequence TGGGGGATGAGAAAAAAAACTCAAAAATGGGGGAAAGCCCGAGTGGCGAGAGAGAGAGAAAAAGGGCGAGAAGAAACGGTTTTGGTGAGAGAAAAGGCGAGTACTTGTAGATGGGTACCATTTGTTGTACTTGGGGGTACTGTTCCGTTTCTCAAAGATATCTTGCGTTCTTGGCTTGGTGACCAACCG Coding sequence (CDS) TGGGGGATGAGAAAAAAAACTCAAAAATGGGGGAAAGCCCGAGTGGCGAGAGAGAGAGAAAAAGGGCGAGAAGAAACGGTTTTGGTGAGAGAAAAGGCGAGTACTTGTAGATGGGTACCATTTGTTGTACTTGGGGGTACTGTTCCGTTTCTCAAAGATATCTTGCGTTCTTGGCTTGGTGACCAACCG Protein sequence WGMRKKTQKWGKARVAREREKGREETVLVREKASTCRWVPFVVLGGTVPFLKDILRSWLGDQP
Homology
BLAST of MS021255 vs. NCBI nr
Match: KGN55079.1 (hypothetical protein Csa_011998 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16 Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 1 WGMRK--KTQKWGKARVARERE---KGREETVLVREKASTCRWV-PFVVLGGTVPFLKDI 60 WGM + TQKWGK RV + +E KGREETVLVREKASTCRWV PFVVL GTVPFLK I Sbjct: 23 WGMAEWVVTQKWGKTRVGKGKEKEKKGREETVLVREKASTCRWVLPFVVLEGTVPFLKAI 82
Query: 61 LRSWLGDQP 64 L SWLGDQP Sbjct: 83 LLSWLGDQP 91
BLAST of MS021255 vs. ExPASy TrEMBL
Match: A0A0A0L228 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627780 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.4e-17 Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 1 WGMRK--KTQKWGKARVARERE---KGREETVLVREKASTCRWV-PFVVLGGTVPFLKDI 60 WGM + TQKWGK RV + +E KGREETVLVREKASTCRWV PFVVL GTVPFLK I Sbjct: 23 WGMAEWVVTQKWGKTRVGKGKEKEKKGREETVLVREKASTCRWVLPFVVLEGTVPFLKAI 82
Query: 61 LRSWLGDQP 64 L SWLGDQP Sbjct: 83 LLSWLGDQP 91
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN55079.1 | 1.7e-16 | 75.36 | hypothetical protein Csa_011998 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L228 | 8.4e-17 | 75.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627780 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS021255.1 | MS021255.1 | mRNA |
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