MS021236 (gene) Bitter gourd (TR) v1

Overview


Name	MS021236
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ubiquitin domain-containing protein
Location	scaffold358: 371936 .. 373778 (+)
RNA-Seq Expression	MS021236
Synteny	MS021236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCATACCATCCTTTTATTCACTGGAAGGTTCTTTTTAATTCAGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACGAAGACAGAGCTTGTGCAGATGCGTGATGAATTTTGGGATACTGCACCTCACTATGGTGGCAGAAAAGGTAATATTTTAAAGTTAATTATTTGGGTCTTAAACATAATTACTGGGTGTCTGTTATGATTATGAGCAGATTAGTCGATCTATATATCATATTTTATAAACAAGTGAAACTAGCGTTGCTAAATGAAATTCTTCATGGTCGTGTAAATTTATGATCCAGAAAGATGACTGCACTGATTTTATGCGACTTCTTATTGTCATGTCTGTAAAGAATTCCTTGCCTAATTAGTTCTTGAGAAGTATCCAACATATTTGGCACGCCGCAATATTGTATGAGGATTTGGAACTTTTATTAGAAAAGAAATTCATTTTGCATTCTGGACCTTTTAGAGGTGGTCTCTATTTAAACTATGCTAACGAGTATTTTCCATCACTTCATCATTAGAAGATTTGGTAGCCGGGGTGACCAAATTCCAGTAGAAATACTTCTATTTAGGAGTGTGTGTTGGTGAGTTCTTCAGTATGAAGGTCCACCATTTTTCTCCTAGTTCTGAACCATAAACAGATAACGCATAGAACAAATTTTAGACCTCTAGTTAAATTATCCTATGTTCGGCAGAGTGTCAACTTCAATGGAGTATAACTAAAACGAAATGCACTGCCTATGTGCGTGCCTGATCTTTATGAAAAATGATCAATATATCATCTGTAGTGTATGAAGGTAACCAATACTAGAATGAAAGTGGGAAGAGCAGGAATATGAAGTAATGACAAAAGAATGAGGATGCTGATTTTTTGGTCCTACAAGTATGCCAATAAAACCTTACCTAATTTTGGCCATTGTAATGATGAAAGAGGATTTAATTATTATGTCGTAATGAAGCAAGTGGGAGAAATTGTCATCAACATCTAAGGCGGCTTTAAGTTCAGTTTCAGTTTCACATTTTGTTTCATGCATTTGCATCTCTTCAGATGGTCAGTTGCCGAGGTTAGAATATTTAAAAGAAGTTTTCACTAGACTATGGGCATTTACATTACACATGGAGTGTTAATAAATCACAACTACTAGTTGGTTCTTAGCAGCGAGAGTTCATAACTACACTCGAAAAGATTTAGCTGTTATTATGTGTCACACTTCCACATTGAGAAAAATTATATGAATGCTATGCTGCTACCCAGTTGACAGATGTTCTCATGTCAAGTTTTGTATTCTGTGATTTGATGTGCAAAGCTACAGAAATTACTCTCATGCTAGATATTAAGCTTAATTTGAGTTTGTTGGCATCATATGCATTATTGGTCCTAAGAGTTTATCAGTTCTAAATTGAATGTTAGTTTTCTCTTAGTATAAGGAGATGCTCTATGAAAATTGCAATTTGGTTATTTTTAAACACGATTGAACGATCAATGAACCAAAAAACTTGAGCTTATGGGTTAGAGTAAATTTAATCATTTACGTTGACATCTAACAGTTATGAAGCCGAGTGCATGCTGTAGGATTCAAATGGTTCAATGAGCAAATTACTATCCTCATATCTTGTTCTGTTCTGTATTGTTAATCTGCATTCTGAAACGATTAAAAAAAATTCTTATTTTGTGAACACTAGAGATCTGGGATGCCCTTAGAGCTGCTGCTGAAGCTGATCTAACGCTGGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTACAGAGTGCCGATTTAACAATTTGTTATGATGAGAGAGGTAGTAAA

mRNA sequence

AACTCATACCATCCTTTTATTCACTGGAAGGTTCTTTTTAATTCAGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACGAAGACAGAGCTTGTGCAGATGCGTGATGAATTTTGGGATACTGCACCTCACTATGGTGGCAGAAAAGAGATCTGGGATGCCCTTAGAGCTGCTGCTGAAGCTGATCTAACGCTGGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTACAGAGTGCCGATTTAACAATTTGTTATGATGAGAGAGGTAGTAAA

Coding sequence (CDS)

AACTCATACCATCCTTTTATTCACTGGAAGGTTCTTTTTAATTCAGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACGAAGACAGAGCTTGTGCAGATGCGTGATGAATTTTGGGATACTGCACCTCACTATGGTGGCAGAAAAGAGATCTGGGATGCCCTTAGAGCTGCTGCTGAAGCTGATCTAACGCTGGCACAAGCAATTGTGGATAGTGCAGGGGTCATTGTACAGAGTGCCGATTTAACAATTTGTTATGATGAGAGAGGTAGTAAA

Protein sequence

NSYHPFIHWKVLFNSGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGSK

Homology

[Close]

BLAST of MS021236 vs. NCBI nr
Match: XP_022144511.1 (ubiquitin domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 75
           GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA
Sbjct: 13  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 72

Query: 76  IVDSAGVIVQSADLTICYDERGSK 100
           IVDSAGVIVQSADLTICYDERG+K
Sbjct: 73  IVDSAGVIVQSADLTICYDERGAK 96

[Close]

BLAST of MS021236 vs. NCBI nr
Match: XP_042953289.1 (ubiquitin domain-containing protein 1-like isoform X1 [Carya illinoinensis] >KAG2677697.1 hypothetical protein I3760_12G108900 [Carya illinoinensis])

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-38
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 11  VLFNSGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADL 70
           V+F  G VKKIRKPK WKHPQPITKT+L+Q+RDEFWDTAPHYGGRKEIWDALRAAAEADL
Sbjct: 28  VIFTKGTVKKIRKPKPWKHPQPITKTQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEADL 87

Query: 71  TLAQAIVDSAGVIVQSADLTICYDERGSK 100
           TLAQAIV+SAGVIVQSADLTICYDERG+K
Sbjct: 88  TLAQAIVESAGVIVQSADLTICYDERGAK 116

[Close]

BLAST of MS021236 vs. NCBI nr
Match: XP_040989150.1 (ubiquitin domain-containing protein 1-like isoform X1 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-38
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 11  VLFNSGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADL 70
           V+F  G VKKIRKPK WKHPQPITKT+LVQ+RDEFWDTAPHYGGRKEIWDALRAAAEADL
Sbjct: 28  VIFTKGTVKKIRKPKPWKHPQPITKTQLVQLRDEFWDTAPHYGGRKEIWDALRAAAEADL 87

Query: 71  TLAQAIVDSAGVIVQSADLTICYDERGSK 100
           TL+QAIV+SAGVIVQSADLTICYDERG+K
Sbjct: 88  TLSQAIVESAGVIVQSADLTICYDERGAK 116

[Close]

BLAST of MS021236 vs. NCBI nr
Match: XP_038898666.1 (ubiquitin domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 2.5e-38
Identity = 79/85 (92.94%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 15  SGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQ 74
           +GPVKKIRKPK WKHPQPI+KT+LV+MRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQ
Sbjct: 12  NGPVKKIRKPKPWKHPQPISKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQ 71

Query: 75  AIVDSAGVIVQSADLTICYDERGSK 100
           AIVDSAGVIVQSADLTICYDERG+K
Sbjct: 72  AIVDSAGVIVQSADLTICYDERGAK 96

[Close]

BLAST of MS021236 vs. NCBI nr
Match: XP_035549832.1 (ubiquitin domain-containing protein 1-like isoform X1 [Juglans regia])

HSP 1 Score: 168.3 bits (425), Expect = 3.3e-38
Identity = 78/89 (87.64%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 11  VLFNSGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADL 70
           V+F  G VKKIRKPK WKHPQPITKT+L+Q+RDEFWDTAPHYGGRKEIWDALRAAAEADL
Sbjct: 28  VIFTKGTVKKIRKPKPWKHPQPITKTQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEADL 87

Query: 71  TLAQAIVDSAGVIVQSADLTICYDERGSK 100
           TL+QAIV+SAGVIVQSADLTICYDERG+K
Sbjct: 88  TLSQAIVESAGVIVQSADLTICYDERGAK 116

[Close]

BLAST of MS021236 vs. ExPASy Swiss-Prot
Match: Q4V8W7 (Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.4e-17
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 17  PVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTL 76
           P+KK  KPK WK   P+T+ +L   RDEFWDTAP + GRKEIWDAL+AAA A    D  L
Sbjct: 29  PLKK-DKPK-WKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAVALECSDHEL 88

Query: 77  AQAIVDSAGVIVQSADLTICYDERGSK 100
           AQAIVD A + +    LT CYDE G++
Sbjct: 89  AQAIVDGANITLPHGSLTECYDELGNR 113

[Close]

BLAST of MS021236 vs. ExPASy Swiss-Prot
Match: Q5EAE3 (Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-17
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 17  PVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTL 76
           P+KK  KPK WK   P+T  +L   RDEFWDTAP + GRKEIWDAL+AAA A    D  L
Sbjct: 31  PLKK-EKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHEL 90

Query: 77  AQAIVDSAGVIVQSADLTICYDERGSK 100
           AQAI+D A + +    LT CYDE G++
Sbjct: 91  AQAIIDGANITLPHGALTECYDELGNR 115

[Close]

BLAST of MS021236 vs. ExPASy Swiss-Prot
Match: Q8WUN7 (Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-17
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 17  PVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTL 76
           P+KK  KPK WK   P+T  +L   RDEFWDTAP + GRKEIWDAL+AAA A    D  L
Sbjct: 31  PLKK-EKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHEL 90

Query: 77  AQAIVDSAGVIVQSADLTICYDERGSK 100
           AQAI+D A + +    LT CYDE G++
Sbjct: 91  AQAIIDGANITLPHGALTECYDELGNR 115

[Close]

BLAST of MS021236 vs. ExPASy Swiss-Prot
Match: Q6PGH0 (Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.7e-17
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 17  PVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTL 76
           P+KK  KPK WK   P+T  +L   RDEFWDTAP + GRKEIWDAL+AAA A    D  L
Sbjct: 31  PLKK-EKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHEL 90

Query: 77  AQAIVDSAGVIVQSADLTICYDERGSK 100
           AQAI+D A + +    LT CYDE G++
Sbjct: 91  AQAIIDGANITLPHGALTECYDELGNR 115

[Close]

BLAST of MS021236 vs. ExPASy Swiss-Prot
Match: Q6DG43 (Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-16
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 17  PVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEA----DLTL 76
           P+K+  KPK WK   P+T  +L   RDEFWDTAP + GRKEIWDAL+AAA+A    D  L
Sbjct: 31  PLKR-EKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQAFESNDHEL 90

Query: 77  AQAIVDSAGVIVQSADLTICYDERGSK 100
           AQAI+D A + +    LT CYDE G++
Sbjct: 91  AQAIIDGASITLPHGALTECYDELGNR 115

[Close]

BLAST of MS021236 vs. ExPASy TrEMBL
Match: A0A6J1CTM1 (ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111014152 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 75
           GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA
Sbjct: 13  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 72

Query: 76  IVDSAGVIVQSADLTICYDERGSK 100
           IVDSAGVIVQSADLTICYDERG+K
Sbjct: 73  IVDSAGVIVQSADLTICYDERGAK 96

[Close]

BLAST of MS021236 vs. ExPASy TrEMBL
Match: A0A6P9F582 (ubiquitin domain-containing protein 1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109004850 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 78/89 (87.64%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 11  VLFNSGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADL 70
           V+F  G VKKIRKPK WKHPQPITKT+L+Q+RDEFWDTAPHYGGRKEIWDALRAAAEADL
Sbjct: 28  VIFTKGTVKKIRKPKPWKHPQPITKTQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEADL 87

Query: 71  TLAQAIVDSAGVIVQSADLTICYDERGSK 100
           TL+QAIV+SAGVIVQSADLTICYDERG+K
Sbjct: 88  TLSQAIVESAGVIVQSADLTICYDERGAK 116

[Close]

BLAST of MS021236 vs. ExPASy TrEMBL
Match: A0A6J1IYX4 (ubiquitin domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480432 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.1e-38
Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 75
           GPVKKIRKPKAWKHPQPITKT+L +MRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQA
Sbjct: 13  GPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQA 72

Query: 76  IVDSAGVIVQSADLTICYDERGSK 100
           IVDSAGVIVQSADLTICYDERG++
Sbjct: 73  IVDSAGVIVQSADLTICYDERGAR 96

[Close]

BLAST of MS021236 vs. ExPASy TrEMBL
Match: A0A6J1FML0 (ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446780 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.1e-38
Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 75
           GPVKKIRKPKAWKHPQPITKT+L +MRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQA
Sbjct: 13  GPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQA 72

Query: 76  IVDSAGVIVQSADLTICYDERGSK 100
           IVDSAGVIVQSADLTICYDERG++
Sbjct: 73  IVDSAGVIVQSADLTICYDERGAR 96

[Close]

BLAST of MS021236 vs. ExPASy TrEMBL
Match: A0A5N6RSN1 (UBD domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_019544 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 75
           G VKKIRKPK WKHPQPITKT L+Q+RDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA
Sbjct: 13  GTVKKIRKPKPWKHPQPITKTHLMQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 72

Query: 76  IVDSAGVIVQSADLTICYDERGSK 100
           IVDSAGVIVQSADLTICYDERG+K
Sbjct: 73  IVDSAGVIVQSADLTICYDERGAK 96

[Close]

BLAST of MS021236 vs. TAIR 10
Match: AT1G53400.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-37
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQA 75
           G VKKIRKPK WKH QPITK EL+++R+EFWDTAPHYGGRKEIWDALRAAAEAD++LAQA
Sbjct: 13  GSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALRAAAEADISLAQA 72

Query: 76  IVDSAGVIVQSADLTICYDERGSK 100
           IVDSAGVIVQ+ DLT+CYDERG+K
Sbjct: 73  IVDSAGVIVQNTDLTVCYDERGAK 96

[Close]

BLAST of MS021236 vs. TAIR 10
Match: AT1G16960.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 140.2 bits (352), Expect = 9.0e-34
Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 16  GPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEA-DLTLAQ 75
           G  +KIR+PK WKHPQPI++ EL QMR+EFWDTAPHYGG+KEIWDALRAAAE  DL+LAQ
Sbjct: 12  GKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALRAAAEEDDLSLAQ 71

Query: 76  AIVDSAGVIVQSADLTICYDERGSK 100
            I++SAGVIVQ+ DLTICYDE+GSK
Sbjct: 72  TILESAGVIVQNTDLTICYDEKGSK 96

[Close]

BLAST of MS021236 vs. TAIR 10
Match: AT5G45740.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 131.3 bits (329), Expect = 4.2e-31
Identity = 58/81 (71.60%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 19  KKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVD 78
           KKI KPK W H +PIT+ +L  MR+EFWDT+PHYGG++EIW+ALRAAAEADL LAQ IVD
Sbjct: 18  KKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEALRAAAEADLKLAQTIVD 77

Query: 79  SAGVIVQSADLTICYDERGSK 100
           SAGVIVQ+ DLT+C+DERG++
Sbjct: 78  SAGVIVQNRDLTLCWDERGAR 98

The following BLAST results are available for this feature:

BLAST of MS021236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144511.1	6.0e-40	98.81	ubiquitin domain-containing protein 1-like [Momordica charantia]	[more]
XP_042953289.1	1.5e-38	88.76	ubiquitin domain-containing protein 1-like isoform X1 [Carya illinoinensis] >KAG...	[more]
XP_040989150.1	1.5e-38	88.76	ubiquitin domain-containing protein 1-like isoform X1 [Juglans microcarpa x Jugl...	[more]
XP_038898666.1	2.5e-38	92.94	ubiquitin domain-containing protein 1-like [Benincasa hispida]	[more]
XP_035549832.1	3.3e-38	87.64	ubiquitin domain-containing protein 1-like isoform X1 [Juglans regia]	[more]

BLAST of MS021236 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V8W7	7.4e-17	56.32	Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1	[more]
Q5EAE3	9.7e-17	55.17	Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1	[more]
Q8WUN7	9.7e-17	55.17	Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2	[more]
Q6PGH0	9.7e-17	55.17	Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=...	[more]
Q6DG43	1.3e-16	54.02	Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1	[more]

BLAST of MS021236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTM1	2.9e-40	98.81	ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6P9F582	1.6e-38	87.64	ubiquitin domain-containing protein 1-like isoform X1 OS=Juglans regia OX=51240 ...	[more]
A0A6J1IYX4	6.1e-38	92.86	ubiquitin domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FML0	6.1e-38	92.86	ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5N6RSN1	1.8e-37	92.86	UBD domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_019544 PE=...	[more]

BLAST of MS021236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53400.1	1.0e-37	83.33	Ubiquitin domain-containing protein	[more]
AT1G16960.1	9.0e-34	76.47	Ubiquitin domain-containing protein	[more]
AT5G45740.1	4.2e-31	71.60	Ubiquitin domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032752	DC-UbP/UBTD2, N-terminal domain	PFAM	PF16455	UBD	coord: 19..98 e-value: 3.7E-26 score: 91.2
IPR038169	DC-UbP/UBTD2, N-terminal domain superfamily	GENE3D	1.20.225.20		coord: 34..99 e-value: 2.5E-22 score: 80.9
IPR039869	Ubiquitin domain-containing protein 1/2	PANTHER	PTHR13609	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	coord: 17..99
None	No IPR available	PANTHER	PTHR13609:SF25	BINDING PROTEIN, PUTATIVE-RELATED	coord: 17..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021236.1	MS021236.1	mRNA