MS021223 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTCTGTGGAACTTGGAAGACAAATTGAGGCTCTCCACGAAGCAAGCCCTAATTCTCTTCACATTCGCGGCGGCGGCCGTGGCCGGGCTCTGCGCGACGGCGTGGGTGAAGAACAGAGGCCGGCGACGGAGCGGGTGGGCGCGGTGGGGCGGAGGAGGCGGAGGCGGAGGAGAGACGCCGGTGCGGCTGTTGGGAGGGGAAGAGGAATTAGGGTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGAGGCCGATATTAATGGGGGAGAAATGCGAGATGCTCAAGTACAGTGGGCTTATTCTGTACGACCAAAGGGGAAGATTGCTGCACGATTCCATTGCCGCCACCGCCATGGAAGGCGCTCCCAAGGTGCTGCTTCGTAAGTCGTTCAGAAATTATTTTTTT ATGGAAGCTCTGTGGAACTTGGAAGACAAATTGAGGCTCTCCACGAAGCAAGCCCTAATTCTCTTCACATTCGCGGCGGCGGCCGTGGCCGGGCTCTGCGCGACGGCGTGGGTGAAGAACAGAGGCCGGCGACGGAGCGGGTGGGCGCGGTGGGGCGGAGGAGGCGGAGGCGGAGGAGAGACGCCGGTGCGGCTGTTGGGAGGGGAAGAGGAATTAGGGTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGAGGCCGATATTAATGGGGGAGAAATGCGAGATGCTCAAGTACAGTGGGCTTATTCTGTACGACCAAAGGGGAAGATTGCTGCACGATTCCATTGCCGCCACCGCCATGGAAGGCGCTCCCAAGGTGCTGCTTCGTAAGTCGTTCAGAAATTATTTTTTT ATGGAAGCTCTGTGGAACTTGGAAGACAAATTGAGGCTCTCCACGAAGCAAGCCCTAATTCTCTTCACATTCGCGGCGGCGGCCGTGGCCGGGCTCTGCGCGACGGCGTGGGTGAAGAACAGAGGCCGGCGACGGAGCGGGTGGGCGCGGTGGGGCGGAGGAGGCGGAGGCGGAGGAGAGACGCCGGTGCGGCTGTTGGGAGGGGAAGAGGAATTAGGGTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGAGGCCGATATTAATGGGGGAGAAATGCGAGATGCTCAAGTACAGTGGGCTTATTCTGTACGACCAAAGGGGAAGATTGCTGCACGATTCCATTGCCGCCACCGCCATGGAAGGCGCTCCCAAGGTGCTGCTTCGTAAGTCGTTCAGAAATTATTTTTTT MEALWNLEDKLRLSTKQALILFTFAAAAVAGLCATAWVKNRGRRRSGWARWGGGGGGGGETPVRLLGGEEELGFGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDQRGRLLHDSIAATAMEGAPKVLLRKSFRNYFF Homology
BLAST of MS021223 vs. NCBI nr
Match: XP_022141812.1 (uncharacterized protein LOC111012091 isoform X1 [Momordica charantia]) HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64 Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0
BLAST of MS021223 vs. NCBI nr
Match: XP_022141821.1 (uncharacterized protein LOC111012091 isoform X2 [Momordica charantia]) HSP 1 Score: 248.8 bits (634), Expect = 2.7e-62 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of MS021223 vs. NCBI nr
Match: XP_022976856.1 (uncharacterized protein LOC111477103 isoform X1 [Cucurbita maxima]) HSP 1 Score: 162.5 bits (410), Expect = 2.5e-36 Identity = 96/148 (64.86%), Postives = 101/148 (68.24%), Query Frame = 0
BLAST of MS021223 vs. NCBI nr
Match: KAG7024654.1 (hypothetical protein SDJN02_13472, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.5 bits (410), Expect = 2.5e-36 Identity = 97/153 (63.40%), Postives = 103/153 (67.32%), Query Frame = 0
BLAST of MS021223 vs. NCBI nr
Match: XP_022976858.1 (uncharacterized protein LOC111477103 isoform X3 [Cucurbita maxima]) HSP 1 Score: 160.2 bits (404), Expect = 1.3e-35 Identity = 95/144 (65.97%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of MS021223 vs. ExPASy TrEMBL
Match: A0A6J1CKW9 (uncharacterized protein LOC111012091 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012091 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 8.1e-65 Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0
BLAST of MS021223 vs. ExPASy TrEMBL
Match: A0A6J1CKD7 (uncharacterized protein LOC111012091 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012091 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of MS021223 vs. ExPASy TrEMBL
Match: A0A6J1II18 (uncharacterized protein LOC111477103 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36 Identity = 96/148 (64.86%), Postives = 101/148 (68.24%), Query Frame = 0
BLAST of MS021223 vs. ExPASy TrEMBL
Match: A0A6J1IND6 (uncharacterized protein LOC111477103 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 6.1e-36 Identity = 95/144 (65.97%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of MS021223 vs. ExPASy TrEMBL
Match: A0A6J1F750 (uncharacterized protein LOC111442724 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442724 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34 Identity = 94/148 (63.51%), Postives = 99/148 (66.89%), Query Frame = 0
BLAST of MS021223 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12 Identity = 55/146 (37.67%), Postives = 70/146 (47.95%), Query Frame = 0
BLAST of MS021223 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06 Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0
BLAST of MS021223 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.5e-05 Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0
BLAST of MS021223 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.7e-04 Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|