MS021177 (gene) Bitter gourd (TR) v1

Overview
NameMS021177
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAAI domain-containing protein
Locationscaffold192: 119584 .. 119904 (+)
RNA-Seq ExpressionMS021177
SyntenyMS021177
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGGGGCGGAGGGCGATGTGGCGGTGGAGCTTCCTCGCGATGCTGCTGCTGCTTATGGCGGCTTCCGGCCGGTTCGCCGGCGCACTGACGGCGGGGCAGTGCAAGGCGGAGAGAGATGTGGCGGTAAAAGAATGCATGGCGGTGGTGTTCGGGAGGATGCCGTCGCCGGCGTGCTGCGAGCGGGCGAGAGTGAGCCACGAGGAGTGTATTTGCCCCGCCGTGACGCCGAAGCTTATGTCATATGTGGATCCTAATCGAGCCATTCGCCTCATCGAAGGTTGCGGCCGGAAGGTCCCTCGCCATTTCAAGTGTGGAAGTAAC

mRNA sequence

GCGGGGCGGAGGGCGATGTGGCGGTGGAGCTTCCTCGCGATGCTGCTGCTGCTTATGGCGGCTTCCGGCCGGTTCGCCGGCGCACTGACGGCGGGGCAGTGCAAGGCGGAGAGAGATGTGGCGGTAAAAGAATGCATGGCGGTGGTGTTCGGGAGGATGCCGTCGCCGGCGTGCTGCGAGCGGGCGAGAGTGAGCCACGAGGAGTGTATTTGCCCCGCCGTGACGCCGAAGCTTATGTCATATGTGGATCCTAATCGAGCCATTCGCCTCATCGAAGGTTGCGGCCGGAAGGTCCCTCGCCATTTCAAGTGTGGAAGTAAC

Coding sequence (CDS)

GCGGGGCGGAGGGCGATGTGGCGGTGGAGCTTCCTCGCGATGCTGCTGCTGCTTATGGCGGCTTCCGGCCGGTTCGCCGGCGCACTGACGGCGGGGCAGTGCAAGGCGGAGAGAGATGTGGCGGTAAAAGAATGCATGGCGGTGGTGTTCGGGAGGATGCCGTCGCCGGCGTGCTGCGAGCGGGCGAGAGTGAGCCACGAGGAGTGTATTTGCCCCGCCGTGACGCCGAAGCTTATGTCATATGTGGATCCTAATCGAGCCATTCGCCTCATCGAAGGTTGCGGCCGGAAGGTCCCTCGCCATTTCAAGTGTGGAAGTAAC

Protein sequence

AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGSN
Homology
BLAST of MS021177 vs. NCBI nr
Match: XP_022155522.1 (uncharacterized protein LOC111022647 [Momordica charantia])

HSP 1 Score: 222.2 bits (565), Expect = 2.1e-54
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query: 1   AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCE 60
           AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCE
Sbjct: 6   AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCE 65

Query: 61  RARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           RARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS
Sbjct: 66  RARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 111

BLAST of MS021177 vs. NCBI nr
Match: KAG6577655.1 (hypothetical protein SDJN03_25229, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.5 bits (415), Expect = 5.1e-37
Identity = 79/102 (77.45%), Postives = 87/102 (85.29%), Query Frame = 0

Query: 6   MWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVS 65
           M RW    +L ++MA +     ALTA QCKAERD+AVKEC+AVVFGR PSPACC+RARVS
Sbjct: 18  MRRWGL--VLAVVMAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVS 77

Query: 66  HEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGSN 108
           H ECICPAVTPKLM+YVDPNRAIRLIEGCGRKVPRHFKCGSN
Sbjct: 78  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSN 117

BLAST of MS021177 vs. NCBI nr
Match: XP_022923494.1 (uncharacterized protein LOC111431169 [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-36
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 0

Query: 6   MWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVS 65
           M RW    +L ++MA +     ALTA QCKAERD+AVKEC+AVVFGR PSPACC+RARVS
Sbjct: 10  MRRWGL--VLAVVMAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVS 69

Query: 66  HEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           H ECICPAVTPKLM+YVDPNRAIRLIEGCGRKVPRHFKCGS
Sbjct: 70  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 108

BLAST of MS021177 vs. NCBI nr
Match: XP_023553118.1 (uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 77/102 (75.49%), Postives = 88/102 (86.27%), Query Frame = 0

Query: 6   MWRWSF-LAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARV 65
           M RW   LA+++++MA +     ALTA QCKAER++AVKEC+AVVFGR PSPACC+RARV
Sbjct: 8   MRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACCQRARV 67

Query: 66  SHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           SH ECICPAVTPKLM+YVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 68  SHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109

BLAST of MS021177 vs. NCBI nr
Match: KAG7015694.1 (hypothetical protein SDJN02_23331, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 28  ALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVSHEECICPAVTPKLMSYVDPNRA 87
           ALTA QCKAERD+AVKEC+AVVFGR PSPACC+RARVSH ECICPAVTPKLM+YVDPNRA
Sbjct: 114 ALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVSHTECICPAVTPKLMTYVDPNRA 173

Query: 88  IRLIEGCGRKVPRHFKCGS 107
           IRLIEGCGRKVPRHFKCGS
Sbjct: 174 IRLIEGCGRKVPRHFKCGS 192

BLAST of MS021177 vs. ExPASy TrEMBL
Match: A0A6J1DPK2 (uncharacterized protein LOC111022647 OS=Momordica charantia OX=3673 GN=LOC111022647 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query: 1   AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCE 60
           AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCE
Sbjct: 6   AGRRAMWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCE 65

Query: 61  RARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           RARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS
Sbjct: 66  RARVSHEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 111

BLAST of MS021177 vs. ExPASy TrEMBL
Match: A0A6J1E6K1 (uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC111431169 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 0

Query: 6   MWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVS 65
           M RW    +L ++MA +     ALTA QCKAERD+AVKEC+AVVFGR PSPACC+RARVS
Sbjct: 10  MRRWGL--VLAVVMAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVS 69

Query: 66  HEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           H ECICPAVTPKLM+YVDPNRAIRLIEGCGRKVPRHFKCGS
Sbjct: 70  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 108

BLAST of MS021177 vs. ExPASy TrEMBL
Match: A0A6J1HQF4 (uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 74/101 (73.27%), Postives = 86/101 (85.15%), Query Frame = 0

Query: 6   MWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVS 65
           M RW  +  ++++MA +     ALTA QCKAER++AVKEC+AVVFGR PSPACC+RARVS
Sbjct: 8   MRRWGLVLAVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRSPSPACCQRARVS 67

Query: 66  HEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           H ECICPAVT KLM+YVDP+RAIRLIEGCGRKVPRHFKCGS
Sbjct: 68  HTECICPAVTAKLMTYVDPSRAIRLIEGCGRKVPRHFKCGS 108

BLAST of MS021177 vs. ExPASy TrEMBL
Match: A0A6J1HN99 (uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-35
Identity = 74/101 (73.27%), Postives = 83/101 (82.18%), Query Frame = 0

Query: 6   MWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVS 65
           M RW  +  + ++MA +     ALTA QCKAERD+AVKEC+ VVFG  PSPACC+RARVS
Sbjct: 12  MKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQRARVS 71

Query: 66  HEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           H ECICPAVTPKLM+YVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 72  HTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 112

BLAST of MS021177 vs. ExPASy TrEMBL
Match: A0A6J1HJS5 (uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-35
Identity = 74/101 (73.27%), Postives = 83/101 (82.18%), Query Frame = 0

Query: 6   MWRWSFLAMLLLLMAASGRFAGALTAGQCKAERDVAVKECMAVVFGRMPSPACCERARVS 65
           M RW  +  + ++MA +     ALTA QCKAERD+AVKEC+ VVFG  PSPACC+RARVS
Sbjct: 12  MKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQRARVS 71

Query: 66  HEECICPAVTPKLMSYVDPNRAIRLIEGCGRKVPRHFKCGS 107
           H ECICPAVTPKLM+YVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 72  HTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 112

BLAST of MS021177 vs. TAIR 10
Match: AT4G33550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 23/78 (29.49%), Postives = 37/78 (47.44%), Query Frame = 0

Query: 34  CKAERDVAVKECMAVVF-----GRMPSPACCERARVSHEECICPAVTPKLMSYVDPNRAI 93
           C A     + EC   V       + PS +CC   R     C C  V+  + +Y+D ++ +
Sbjct: 32  CGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPIDVPCACRYVSRDVTNYIDMDKVV 91

Query: 94  RLIEGCGRKVPRHFKCGS 107
            +   CG+K+P  +KCGS
Sbjct: 92  YVARSCGKKIPSGYKCGS 109

BLAST of MS021177 vs. TAIR 10
Match: AT4G33550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 23/78 (29.49%), Postives = 37/78 (47.44%), Query Frame = 0

Query: 34  CKAERDVAVKECMAVVF-----GRMPSPACCERARVSHEECICPAVTPKLMSYVDPNRAI 93
           C A     + EC   V       + PS +CC   R     C C  V+  + +Y+D ++ +
Sbjct: 32  CGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPIDVPCACRYVSRDVTNYIDMDKVV 91

Query: 94  RLIEGCGRKVPRHFKCGS 107
            +   CG+K+P  +KCGS
Sbjct: 92  YVARSCGKKIPSGYKCGS 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155522.12.1e-54100.00uncharacterized protein LOC111022647 [Momordica charantia][more]
KAG6577655.15.1e-3777.45hypothetical protein SDJN03_25229, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022923494.12.6e-3677.23uncharacterized protein LOC111431169 [Cucurbita moschata][more]
XP_023553118.17.4e-3675.49uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo][more]
KAG7015694.12.2e-3591.14hypothetical protein SDJN02_23331, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DPK21.0e-54100.00uncharacterized protein LOC111022647 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1E6K11.2e-3677.23uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A6J1HQF41.0e-3573.27uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HN991.8e-3573.27uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HJS51.8e-3573.27uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT4G33550.11.7e-0629.49Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT4G33550.21.7e-0629.49Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 16..104
e-value: 3.2E-10
score: 40.0
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 33..102
e-value: 1.3E-7
score: 33.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 44..100
NoneNo IPR availablePANTHERPTHR33286BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 9..106
NoneNo IPR availablePANTHERPTHR33286:SF28SUBFAMILY NOT NAMEDcoord: 9..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS021177.1MS021177.1mRNA