MS021077 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATGGGAGAGAAGTACTGCCTCCGAACCCGGAGAGCGTTGGCGTAACTGCAACCTCTGCTGCTGCTTCTCATGGAATTGAGGTAGCAGTAGAGTTCAAGCCTGTTGAACACCCAGTCGAGCCTCTGGAAAACGACAGGCCAATTCAGTGCCCATTGCCTGAACCATCGATTCTGAATGTGAGCTGCAGACTTGATCTTCTTGTACAATTTTGTTCATTTTAATGCCTATCCGATCCTTATATCTAGTTCCGTTATACCATATGTATATATCCAAGGCGAAGCAAGTGGCTCAACACTTTATCTTCATGAGTGTTAGACAAGTTGCGGTCGCAAAAATTGAATATTCTAGATTAATTTTGTAAGGTCAACTCGTGATTTTAAAGGCGAAATTTAGAACCATACAAAAAACCAATATAAGCTTCATAGAGTAAAGGCGTTCCTTCATTGGAAAAGGACCAAAATCATAGGTTTAAATTTCTAGCTTATGCCTATGGGGTTTCCTGGCATGGGAATTTCTAGGAACCCCAACCGGGCAATGTTGCCGATTTGGTAAAGTTAGTTCAAACATGTGAGATCAAACAAAGAACTATGGATTCAGAAGGACTTGGGTTAATTTGTTCTTCATTCAACTTGAATGATATTAATTTCTCTTATCTATGAGGGTGAAGTATGTAAAAGTTTGGCTGAGGATTCTTTCTGAAAAAATACAAGTGCTTTTAAGGTCATTGTTAGCTTCTATTTATTAGTGATACCTTATTTTGAGATTTCTTTTCCTCTTCCTGAACATTTAGTATGCAGGTGTCGATACGTCTACCTGCAAGTTTTTTTCTTTTTCTCTTTCCACCCCGGGCACTATTGTCAAAGTTTGTTAAAAAATTTACTTGCACAATATGTATTGTCTCGGCCCTCTCGGGTTTTGTGGATTAAGTATAACATTTATGATGGTGAAGTTTTGAAACTATGAAGCTGGTCTCGATTGGATTAACTGTTAGGGAATTATGATGTTGTTGATTTCCATATTCATTTGCCAAACTTATTGGTGAAGGTTGTAGATTTGAGATATATTTTGAGATCTAAATCTGATTTTGAACTCCTCAATCACTAGGATGGCACAATATGGAAGCAGCGATCTGCGAGTATGCGTAAACTGCCAGATTTGCCTGTGATGAAGGAAGCTGAAGTTGGTGAGACAAGACCACAGGCGACACGGCCAAATCGCTTGATCTTACCATCGATCAGTGCTCCCGAACATAACATCCTAAACCTACTCGAGGAATCTGGGATA GATGGGAGAGAAGTACTGCCTCCGAACCCGGAGAGCGTTGGCGTAACTGCAACCTCTGCTGCTGCTTCTCATGGAATTGAGGTAGCAGTAGAGTTCAAGCCTGTTGAACACCCAGTCGAGCCTCTGGAAAACGACAGGCCAATTCAGTGCCCATTGCCTGAACCATCGATTCTGAATGATGGCACAATATGGAAGCAGCGATCTGCGAGTATGCGTAAACTGCCAGATTTGCCTGTGATGAAGGAAGCTGAAGTTGGTGAGACAAGACCACAGGCGACACGGCCAAATCGCTTGATCTTACCATCGATCAGTGCTCCCGAACATAACATCCTAAACCTACTCGAGGAATCTGGGATA GATGGGAGAGAAGTACTGCCTCCGAACCCGGAGAGCGTTGGCGTAACTGCAACCTCTGCTGCTGCTTCTCATGGAATTGAGGTAGCAGTAGAGTTCAAGCCTGTTGAACACCCAGTCGAGCCTCTGGAAAACGACAGGCCAATTCAGTGCCCATTGCCTGAACCATCGATTCTGAATGATGGCACAATATGGAAGCAGCGATCTGCGAGTATGCGTAAACTGCCAGATTTGCCTGTGATGAAGGAAGCTGAAGTTGGTGAGACAAGACCACAGGCGACACGGCCAAATCGCTTGATCTTACCATCGATCAGTGCTCCCGAACATAACATCCTAAACCTACTCGAGGAATCTGGGATA DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILNDGTIWKQRSASMRKLPDLPVMKEAEVGETRPQATRPNRLILPSISAPEHNILNLLEESGI Homology
BLAST of MS021077 vs. NCBI nr
Match: XP_022145314.1 (uncharacterized protein LOC111014798 [Momordica charantia]) HSP 1 Score: 234.6 bits (597), Expect = 4.5e-58 Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of MS021077 vs. NCBI nr
Match: XP_008448622.1 (PREDICTED: uncharacterized protein LOC103490741 isoform X2 [Cucumis melo]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS021077 vs. NCBI nr
Match: XP_008448621.1 (PREDICTED: uncharacterized protein LOC103490741 isoform X1 [Cucumis melo]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS021077 vs. NCBI nr
Match: KAA0053008.1 (uncharacterized protein E6C27_scaffold344G001200 [Cucumis melo var. makuwa] >TYK11464.1 uncharacterized protein E5676_scaffold139G001210 [Cucumis melo var. makuwa]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS021077 vs. NCBI nr
Match: XP_038891759.1 (uncharacterized protein LOC120081150 isoform X1 [Benincasa hispida]) HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50 Identity = 104/119 (87.39%), Postives = 111/119 (93.28%), Query Frame = 0
BLAST of MS021077 vs. ExPASy TrEMBL
Match: A0A6J1CUV8 (uncharacterized protein LOC111014798 OS=Momordica charantia OX=3673 GN=LOC111014798 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58 Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of MS021077 vs. ExPASy TrEMBL
Match: A0A5D3CJW0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001210 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.8e-51 Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS021077 vs. ExPASy TrEMBL
Match: A0A1S3BKR4 (uncharacterized protein LOC103490741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490741 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.8e-51 Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS021077 vs. ExPASy TrEMBL
Match: A0A1S3BL03 (uncharacterized protein LOC103490741 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490741 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.8e-51 Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of MS021077 vs. ExPASy TrEMBL
Match: A0A0A0L159 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006710 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50 Identity = 103/119 (86.55%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of MS021077 vs. TAIR 10
Match: AT1G31940.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 151.0 bits (380), Expect = 6.1e-37 Identity = 78/124 (62.90%), Postives = 94/124 (75.81%), Query Frame = 0
BLAST of MS021077 vs. TAIR 10
Match: AT2G35585.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32 Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of MS021077 vs. TAIR 10
Match: AT2G01913.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05 Identity = 23/48 (47.92%), Postives = 28/48 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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