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MS020890 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGGTCCGGGCGGAGATCAGGTGGTGCGGGTGCAGTGGCCGTGGTCGCGGTGTGGCTGATGATCTGGTTGGAACTTGGGGATGCTGCTGCAACTTTTATGGTTGGTGACTCTAATGGATGGAACTTCAACGTGAAGGGATGGCCAAATGGGAAGGTCTTTAGAGCTGGTGATGTACTCAGTGAGTTCTTACATCTCTCGTATCTCGATGTTTCAATATTTTTATCGTCTTGTTTCTTGGTTATTGTTTGTTGAGGTTAAATTACAAATTTAGTTCATAGAGTTTAAAGATTGTGTGAACCATAAAAAGTCTTATATATGTCCAAAATTTTTTAATGTCATGTCTGATATATTAAAAATTTTAAAACATGTCTAATAAGTTTACGAGCCTTTAATTTTTTTAATCCAATATAGATCTTTAAACTTTTATAATTTTGTGTTTATTAATAGATCTCTGATTTAAAGACAAATTTTAAAGTTTCGAGACTTAATTGTACACAAAATTAAAAGTTTAAAGATTTATTTGACACTTTAAAGTTTAGAGGCTTAATTAGATACGAAAGAAAAAGTTCTTTAAAGTTTATAATATATTAAAAACAACACGAAAGTTTAGAGATCTATTTAAATATTTTGTAAAGTTTAAGAATTGGTCACAATTCTAGATGTTCTAAAACTAAACTTTTAATTTAATCTAAATTATTTGATAGATGTTTGGCATTTGTCTTTTGTTTTGTTTTGTTATTATTTTATTTTATTTTATTTTTATTGATGCGGTGCCATGTGACAAATGACTATAATAAGTGATCTCATAGTAAATTTAATTTTTTTTGTTATATAATTAAATGAAAAATTTATAAAATTTTAAGGATTAAAATAGTAAAATGAAAAGTTGAGACACTATATTAAAATGAGTGTAGGCCCTATATAAATATTTAGCCTATAATTTGAGCTTTTTTTTTTTTTTCAATTATTGTATTTTTTGTTTATTTATCCTAGACGTTGAAATAAGTTTGAAACATATGTATGAAGGTGAGGGCAACTAATTTATCTTGAACCTAGCTTTCTACTTGTCAATTTTCACCTTTAAAATTTTAACTCTAACTGCTCAAAATGTACTCTTAAATAAGTGGTGAAATTAATATAGTTGTAATTGACATAATCTCCAATCAAGAGGTTGTGAGTTCGATCCCTCACCCTTACATGTTGTATTCAAAAAAGAAAAAAAAACTTTCTCAAACAAATATTACAAATTATTCACGAACCCAACCGTGACTAAAAATCATTACCTTCTTGAAAGAAAGGTCTATAATTAGCGACAAATCTTAAAAAGAGTATCAATGTCATAATCATCCTAAATTGCCCTTTTAATTTTTAAATTTGTCGAAATCGATGTCGTGTGACTTACATTATGGATCTCTATAATCGAGACTCATTGTGTGGATCGAGATACATTATGATCAGCATAAGACTTGAACTCAAGACCTCATGGTAGGTGATACTACCGTACCATATCTCCTAGGAGACAAGAGTATCAAATTCACGATCAACCCTAAGTTGGCCCTTTTCAAACTCATGCTAACCACCCGTTTATAGTACTAAAATCCTATGAAAATTCTTTAAAATAATTTAGGATCATTTGCCAATATGAACTTAGCTCAGTTCGAATCACCGCCCCACTTGTTGTGCTCAAAAGAAAAAAAAATTGATTCGTTCCTTTTTCTTATTTTTCGTTTTCAATTTTTGAGAAATATAAGCGTTCTTTTAACTATTTCTTGTTTTTTTTATTTTTAACAATACGTATTAAGTATTGTGTAGATATATTTTGGAAACAACAAAATTAAAACTTCTTGTCTTTTGTTCTCATTCAAAACTTTTTCAAAATATAAATAAAGTCATTATTTTATTATTATTGATTTATAAAATTAATTTTCATACAAAAACTTTACTTTTCTAATTCAGAATTTTAGAAAAGAAGACCAAACATGTTTCTGACCTTTTTTATTTCAATAATAAAAAAGAGTAACAAGAAACAATTTACCAAACATAGACCTTTTCTTTATTTATTCAAAAATAGGAAACTAAGAATCAAGAATCAAGAAATAAGAACGCTAACAAACAAGTCTTAAATGTTACCGGGTTACGGGTTAGCCATTCGTTCGTTGAAATAATTTAATAAAATAATAAATAATTATTGTATGCAATTTTTTTTCAGGATTCAAGTACGACCCAAGAGTTCACAATGTGGTGGCAGTGGACGAGGAGGGCTACAACAGCTGCACAGCTCCAACAGGAACCAAAGTGTTGAGTTCAGGCAACGATGAGATCAAGCTCTCACCAGGACACAACTTCTTTATATGCACCACTCCAGGCCACTGCCAAGCTGGGATGAAGATTGCCACCACTGCCCTC ATGGCTCGGTCCGGGCGGAGATCAGGTGGTGCGGGTGCAGTGGCCGTGGTCGCGGTGTGGCTGATGATCTGGTTGGAACTTGGGGATGCTGCTGCAACTTTTATGGTTGGTGACTCTAATGGATGGAACTTCAACGTGAAGGGATGGCCAAATGGGAAGGTCTTTAGAGCTGGTGATGTACTCAGATTCAAGTACGACCCAAGAGTTCACAATGTGGTGGCAGTGGACGAGGAGGGCTACAACAGCTGCACAGCTCCAACAGGAACCAAAGTGTTGAGTTCAGGCAACGATGAGATCAAGCTCTCACCAGGACACAACTTCTTTATATGCACCACTCCAGGCCACTGCCAAGCTGGGATGAAGATTGCCACCACTGCCCTC ATGGCTCGGTCCGGGCGGAGATCAGGTGGTGCGGGTGCAGTGGCCGTGGTCGCGGTGTGGCTGATGATCTGGTTGGAACTTGGGGATGCTGCTGCAACTTTTATGGTTGGTGACTCTAATGGATGGAACTTCAACGTGAAGGGATGGCCAAATGGGAAGGTCTTTAGAGCTGGTGATGTACTCAGATTCAAGTACGACCCAAGAGTTCACAATGTGGTGGCAGTGGACGAGGAGGGCTACAACAGCTGCACAGCTCCAACAGGAACCAAAGTGTTGAGTTCAGGCAACGATGAGATCAAGCTCTCACCAGGACACAACTTCTTTATATGCACCACTCCAGGCCACTGCCAAGCTGGGATGAAGATTGCCACCACTGCCCTC MARSGRRSGGAGAVAVVAVWLMIWLELGDAAATFMVGDSNGWNFNVKGWPNGKVFRAGDVLRFKYDPRVHNVVAVDEEGYNSCTAPTGTKVLSSGNDEIKLSPGHNFFICTTPGHCQAGMKIATTAL Homology
BLAST of MS020890 vs. NCBI nr
Match: XP_022153713.1 (basic blue protein-like [Momordica charantia]) HSP 1 Score: 267.3 bits (682), Expect = 6.7e-68 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of MS020890 vs. NCBI nr
Match: KAG6571300.1 (hypothetical protein SDJN03_30215, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41 Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 0
BLAST of MS020890 vs. NCBI nr
Match: KAG6607681.1 (hypothetical protein SDJN03_01023, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177.6 bits (449), Expect = 7.0e-41 Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of MS020890 vs. NCBI nr
Match: XP_022981647.1 (basic blue protein-like [Cucurbita maxima]) HSP 1 Score: 177.2 bits (448), Expect = 9.1e-41 Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of MS020890 vs. NCBI nr
Match: XP_022941118.1 (basic blue protein-like [Cucurbita moschata] >XP_022941139.1 basic blue protein-like [Cucurbita moschata]) HSP 1 Score: 177.2 bits (448), Expect = 9.1e-41 Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of MS020890 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-31 Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of MS020890 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 2.0e-30 Identity = 68/126 (53.97%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of MS020890 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 7.5e-30 Identity = 54/96 (56.25%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS020890 vs. ExPASy Swiss-Prot
Match: O80517 (Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.1e-16 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of MS020890 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15 Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 0
BLAST of MS020890 vs. ExPASy TrEMBL
Match: A0A6J1DI73 (basic blue protein-like OS=Momordica charantia OX=3673 GN=LOC111021165 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.2e-68 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of MS020890 vs. ExPASy TrEMBL
Match: A0A6J1FMC7 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446527 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41 Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of MS020890 vs. ExPASy TrEMBL
Match: A0A6J1IUK3 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111480705 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41 Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of MS020890 vs. ExPASy TrEMBL
Match: A0A6J1FK49 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446161 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.5e-41 Identity = 84/128 (65.62%), Postives = 95/128 (74.22%), Query Frame = 0
BLAST of MS020890 vs. ExPASy TrEMBL
Match: A0A6J1FK99 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446518 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40 Identity = 83/128 (64.84%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of MS020890 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin ) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31 Identity = 68/126 (53.97%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of MS020890 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 0
BLAST of MS020890 vs. TAIR 10
Match: AT1G17800.1 (early nodulin-like protein 22 ) HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18 Identity = 52/133 (39.10%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of MS020890 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 5.2e-18 Identity = 49/121 (40.50%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of MS020890 vs. TAIR 10
Match: AT2G44790.1 (uclacyanin 2 ) HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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