MS020778 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATACAGAGCACAAATCCACTAAGTTGAATATCTTCTCCATCGTTGCACCCACATGCGAGCGTTCCACGCCTCTCGTGGATTTCCTTTTGCACATGCTGTGTCTCCAGTTTTGCGGCGGCGCCGCTCCTCCCGGTGATCCATAACAACTTTAACCTCACCAACACGAAGATTGGCAACGTCGGA AATACAGAGCACAAATCCACTAAGTTGAATATCTTCTCCATCGTTCCACATGCGAGCGTTCCACGCCTCTCGTGGATTTCCTTTTGCACATGCTGTGTCTCCAGTTTTGCGGCGGCGCCGCTCCTCCCGGTGATCCATAACAACTTTAACCTCACCAACACGAAGATTGGCAACGTCGGA AATACAGAGCACAAATCCACTAAGTTGAATATCTTCTCCATCGTTCCACATGCGAGCGTTCCACGCCTCTCGTGGATTTCCTTTTGCACATGCTGTGTCTCCAGTTTTGCGGCGGCGCCGCTCCTCCCGGTGATCCATAACAACTTTAACCTCACCAACACGAAGATTGGCAACGTCGGA NTEHKSTKLNIFSIVPHASVPRLSWISFCTCCVSSFAAAPLLPVIHNNFNLTNTKIGNVG Homology
BLAST of MS020778 vs. NCBI nr
Match: KAG6601518.1 (High affinity nitrate transporter 2.5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032298.1 High affinity nitrate transporter 2.5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13 Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. NCBI nr
Match: XP_023551949.1 (high affinity nitrate transporter 2.5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13 Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. NCBI nr
Match: XP_022957579.1 (high affinity nitrate transporter 2.5 [Cucurbita moschata]) HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13 Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. NCBI nr
Match: XP_022993820.1 (high affinity nitrate transporter 2.5 [Cucurbita maxima]) HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13 Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. NCBI nr
Match: XP_038891297.1 (high affinity nitrate transporter 2.5-like [Benincasa hispida]) HSP 1 Score: 85.1 bits (209), Expect = 2.2e-13 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. ExPASy Swiss-Prot
Match: O82811 (High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana OX=3702 GN=NRT2.1 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.4e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS020778 vs. ExPASy Swiss-Prot
Match: Q9LMZ9 (High-affinity nitrate transporter 2.2 OS=Arabidopsis thaliana OX=3702 GN=NRT2.2 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-10 Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of MS020778 vs. ExPASy Swiss-Prot
Match: P0DKG9 (High-affinity nitrate transporter 2.1 OS=Oryza sativa subsp. japonica OX=39947 GN=NRT2.1 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-10 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS020778 vs. ExPASy Swiss-Prot
Match: P0DKH0 (High-affinity nitrate transporter 2.2 OS=Oryza sativa subsp. japonica OX=39947 GN=NRT2.2 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-10 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS020778 vs. ExPASy Swiss-Prot
Match: Q9FJH8 (High affinity nitrate transporter 2.4 OS=Arabidopsis thaliana OX=3702 GN=NRT2.4 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.1e-10 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of MS020778 vs. ExPASy TrEMBL
Match: A0A6J1JZK1 (high affinity nitrate transporter 2.5 OS=Cucurbita maxima OX=3661 GN=LOC111489712 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.3e-14 Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. ExPASy TrEMBL
Match: A0A6J1H2D0 (high affinity nitrate transporter 2.5 OS=Cucurbita moschata OX=3662 GN=LOC111458928 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.3e-14 Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. ExPASy TrEMBL
Match: A0A5A7SWP7 (High affinity nitrate transporter 2.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001200 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. ExPASy TrEMBL
Match: A0A0A0KTM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599860 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. ExPASy TrEMBL
Match: S4VIV8 (High-affinity nitrate transporter NRT2.3 OS=Cucumis sativus OX=3659 GN=NRT2.3 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of MS020778 vs. TAIR 10
Match: AT1G08090.1 (nitrate transporter 2:1 ) HSP 1 Score: 71.2 bits (173), Expect = 3.1e-13 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MS020778 vs. TAIR 10
Match: AT1G08100.1 (nitrate transporter 2.2 ) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-11 Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of MS020778 vs. TAIR 10
Match: AT5G60770.1 (nitrate transporter 2.4 ) HSP 1 Score: 64.7 bits (156), Expect = 2.9e-11 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of MS020778 vs. TAIR 10
Match: AT1G12940.1 (nitrate transporter2.5 ) HSP 1 Score: 63.5 bits (153), Expect = 6.5e-11 Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of MS020778 vs. TAIR 10
Match: AT5G60780.1 (nitrate transporter 2.3 ) HSP 1 Score: 62.0 bits (149), Expect = 1.9e-10 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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