MS020679 (gene) Bitter gourd (TR) v1

Overview


Name	MS020679
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NOT2 / NOT3 / NOT5 family
Location	scaffold375: 2132976 .. 2146288 (+)
RNA-Seq Expression	MS020679
Synteny	MS020679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCAGTCATCTCTTAGTGGATCAGCTTCAAATCTTCCAGATGGTACTGGACGATCTTTTACTGCCTCATTTTCTGGTCAGTCTGGTGCAGCCTCTCCTGTTTTCCATCACACTGGTGGGTGCATGTTCCTAGAGTTTTAATAGTTTTTGTTCAAATTTATGAAACTTATAGGTCTCGATTTTCAGGAACTATTCAAGGGCTGCATAACATACATGGGAGCTTCAATGTTCAAAACATGTCAGGTGCACTAACTTCAAGAAATTCAACGATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACACTATCAAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGGTATTTTTCAAGGGCAGGCCATTTGTTTATAATTCAATGCCGTGTTTATTGAGTGTGATTCTTAGCACCAGTTTTCCTGTAGTTTATTTGAGTGCTGTTTATTGTGGTCAGGTCACAAAAAATTAGCTCTTGCATGATAACGTTTAGCAATAAAAGTACACTTGTTTATAAATATTTTTGAAGAACTGTTGTAATTATTATAGAAGAAGACATGTACTCTTGAATAACTTTATTGAAGAAAAGGTGATTGAGAGCTGCTTTACTAATTGGATAATGAATCATAATGTTCCTGTTATTGGATTTTTCCAAGTCCTAAAATTATATTTGACTGTTAAACGACATCTTTAAAAGAACTAGAAGCAACAGAGGCAGAATCCTAATATTTTCCTCTCACAGGCCAATATAATTGTTTATGTGCTTCCTCTCCATTTTTACCGTTTCTTCTCTTCTGTAGTTGTCTCACGGCAGCTCTCATGGGCACTCAGGANAAGGCCATTTGTTTATAATTCAATGCCGTGTTTATTGAGTGTGATTCTTAGCACCAGTTTTCCTGTAGTTTATTTGAGTGCTGTTTATTGTGGTCAGGTCACAAAAAATTAGCTCTTGCATGATAACGTTTAGCAATAAAAGTACACTTGTTTATAAATATTTTTGAAGAACTGTTGTAATTATTATAGAAGAAGACATGTACTCTTGAATAACTTTATTGAAGAAAAGGTGATTGAGAGCTGCTTTACTAATTGGATAATGAATCATAATGTTCCTGTTATTGGATTTTTCCAAGTACTGAAATTATATTTGACTGTTAAATGACATCTTTTAAAAGAACTAGAAGCAACAGAGGCAGAATCCTAATATTTTCCTCTCACAGACCAATATAATTGTTTATGTGCTTCCTCTCCATTTTTACCGTTTTCTTCTCTTCTGTAGTTGTCTCACGGCAGCTCTCATGGGCACTCAGGAGTCGCAAATAGAGGAGGTATAAATGTTGTAGGAAACCCTGGATTTAGTAGCAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTTTGTCTACTTCTGCAGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGGGTGTCCCCGATTTTGGGAAATGCGGGTACTCGTATCACAAGTTCAATGGGGAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTTCTGGTGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTAAACATTAGTGCAAATAGTGGATCTGGAAGTTTAACCGTGCAAGGACAAAACCGTTTAATGGGTGGTGTTCTTCCACAAGGTACAGTTCCTTGACTTTCTGTATGAGTGCTCATATTTATGTACACTGTCCAACGTCTCAGTAATATTATTAGTCTGTACTTGGTTCTCTGATCACTGCATGCGGGCCGGTATGTAGATGTGTCTTACAGTAATGGTGTCAACCTTTACAAATGAATTTCCGATTCAGTAACTGCTGAACAACTATTTCTTTCCTGCATAATTTAGTGCTAACTAGTCATTATCTAGCGGGAAAATGTTATATCCTCCCTCTTGTACTCTTTTTTCCTCTAAAGTAGAAAAGATCATAGTAGATGTTAGTCTAAAAATTAATCATCTTGTTCCGTTTGAAAGAGTGGCATGCAACATGGAAACTAGTTACTCACTTTACTTTGTTTCCTTGTTCCATTTTATTCGATATTCATATTTATTCGATGTATTGGTTATTTATGATTAAGTTGCATGTTCTGAAGTGCGGTCATTCTCTCCATGGATGTGCTTTTTTTACATTTTTCCTACAAATATCTTATACATGATGCTCTACTCACTGAAAAATGGAAATGCATTCATGATTATGCTTTTTTATATATACACGTCTCTGTATAAATGCTACTTTGTAGTTAACAATGTTCTATGCTATTTTGCCGCTGATGACATTTTCTTGCTTCAGGATCTCAACAGGTTATTTCTATGTTGGGTAGTTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAAAACCATGTGCAGAGTGTGAATAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAATGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGCTGTCTAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGGCAATTAAGTTAGTAACTGGATATTGTTGGGGTTTTTTAATTTTGTTTACTTTTCCTCTGTACCTACTTTGACCTTTAGGAATTTCATGTAATTGTTTCAGGTTCGCTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAGGAGTTCAGCATTCAGAATGAAGATTTTCCAGCCTTGCCGAGATTTAAAGGTGCCAATCCCTTCGTTGCTTCCAGTAGTTTGTATTCATGTAAATCATATACCACAACTTTGGTTGCTGCCTTCTGCTCCTATCATTTTCATAGAATAAGTACAATAATTTTGGAGAACTATTGTCTGGAAATGTCCTGGTTGACCATGATTTATAGCTCAACAGATTAAGTAGAATTTCAGATTTTGGTTACTCAAGTAGGCCATTGCAATTGTTAAGCTCTGGTTCTACTTCATGGAGAGTCCTGGATTGTTTTTATGTTATCTGCTTGGATTCTAAATTCATCTCCACATGTAAAACACATTAACCTTGTGCTTGCTTCGAATATAAAACGAGACACTATCTATCATTGATTATAGTTCTAGATCTTGTGCAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGACAGAACAACATGAAAATTCTGTGCCTATGATGCAGTCTCAGCAGTTCTCTGTGGGAACACTTTTTACTCTCTCTTCTGCTGACTATCCCCATTTTTTTATTGGCTACTAATCATTTTTTCCATTGCTGTTTTGTTTTTAAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAGCAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCACCTGGAAATAATCAGGATCTTCTTCATTTACATGGATCCGATATTTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGGTGTGCAATTGTATTACTGTAGGAGGTTAAATTTTTATCCCTCGCATTTTTATTTCTCATTCTGCAAGCGCAAGGAATCAACCTATTGCTCAGACTTTTTATTTCTTGTCCAATTGTTACCATGTATTATAAGAATTTAACGGGTTTGCTTTGTAGATGATCAATTAGTAGCTTATATGTCTTAAATGTCATCCCTGTTGAAGTTTTTCAATATCGATGTATGTTTGTTCTTGTTCAGTCTAGTGGACCTCCTGGAATTGGTTTAAGACCCCTGAACTCTCCTAATTCAGCTTCTGGAATGAGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCCCAGTTCCGATTGCAACATATGTCTGGCGTTAGCCAGTCATTTAGGGATCAGGGCATGAAATCTATGCAGGCGGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCACTCGGAATTGATTTGACCACATTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGGTCCCCATGGTCTGATGAGCCTGCTAAGGGCGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCTCCTACTCTACATGTGAGCTTCTTCACCTCTCCTTCCTCTCCCAGTCTATGTGAAGCTTTCTACAGTTTCTTGTTAACTGATCGTTTTTTGGGTGACTGCAGCAAGGGTACTTCTCAAAATTCAGGCTGGAGACACTGTTTTATATATTTTTCAGGTGTGATATTATTAAATAATTTTACCATTTCTTTTCCATTCATTTGTAACCTGTGAATGTTTTATTATATATGGTTCTTCTCCGTCTTGTTTTGCAGCATGCCAAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTGTAAGCTCTTATCATTGACATACTGTGCTGTTTGTTATTTTCACCGAAGTTATAGAAGTAATTTATGGATAAACTTTTTCCTATGAGCCGTTGCCAACCTTTTTTTTTTTTCTTTTTTTCTTTTCGTAGTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAGCACTTATGAAAGAGGATCGTATCACTGTTTCGACCCAAACACATTTGAAACTGTGCGCAAGGTTTGGACTTTGTCAGTAGTTTTCCTTTAAAGTATTTATTTATATTACCAATGTATCATTCCATTCCTCATATTTCGTCCATTGGCTTCAGGATAATTTCGTCCTCCATTACGAGATGTTAGAAAAGAGACCGGTTCTACCGCAACATTAGTATTTTTTTTTTCCTTTTTACATGTAAAGGTAATTTGTGGATTTTTCTCTTGTTAGCCTTAGTTCTGTTTGTAGAATTAATGTTTTGTTAAATTGGTAATTGCAATCAATTACGTAGGCCCTTGTAATTGTATTTTGTAATGAGCCGATTTAGTGATTTCTTTCCCCGTTAGTTTACAAACTTTACATGATATAGTCGAACCCCCGGCATTGATTAATTGCTTGCCAGCTTGTTTGTTGAGTGAAGAAGGGGTCATTTAGGGCCTGTTAAAAGTGTTTCTTGTTTTTTATTTTAGTTTTATCGAGAAATTTAAGCAGTTGACAACTATTTTTGTTTTTTGTTTTTTATTTTTAGAAATGATCTAAAAAATGTACTGAAATTCTAGAAATGATAAAATCAAGTTTCTTGTTTCGTGTTTCAATTTTCAAATTTTTCTAAAATATATGTAAGAAATATCGTTTTATTGTAAAGAATAATAAATAATTTAAAAAATAAGAAATGGAGTCCTTAATTTCTACCTTTATTGTTAAATGGGTTCAGCAAGTTCGAAATTGTTGAGAAATTTTAACATTTTATTTGGGCTTTTTTCTAGTGTAGAGGAGTGAGTTCAAACTTACGATCTCTTCATGAAGGTATATGTCAATTATTGGAGGCTTACAACCTCTCCATGAAGGTATATGTCAATTATTGGAGGCTCGTTTTGACTTTATTTGAGGGTCTTAATTGAGAATTTTTATAATTATTAGAGCATAGACTTTATTTGAGGGTTTTAGTTGAGAGTTTTCATAATTATTAGGGTCTACGTTGAGAACTTTAAATGTTTATTAATTAATAATAAATATTGTGGAATTCTTTGTAGGGAAAATCTTTCAAATGGGGTTTTATCTACAGAGACGTGTACAGAGAAGTGGGAGTTTATACGTTCTTTATTGTAATATAAAAAAATGTGGCCTTTAAACTTGCAGGCTAATTTAATTGTTTCGGAGAAATATAAATACTTTTAATATCTTCTTAAAAGAACACTTGAAGTAAACTCAAGCAAGGTTGATTTGATTATGTAGGCAAAAGATTAGGTTTAACATTGTTAAGTTTAGAGATATATTATGAATTTATGATTGTATTAAACAAGGTTGGTTCTTATTAGTTTGGGGATAGTAAAAATTTGTTATCCAAATATTTATAGTGTACTGATCCAGAATGGAATTGGATAAAATTAATTAATAATGAAATATCATTAAAATAAATAATTCATTTTTTATTTTGACTAGATTTTTTAAGTTCTCAATCTTACCTTTAATGCATTATTAAATTATTATTTTATCAAATAATTTAACATATAGATATGTCACTCATATGCTCCTTACATGTGAAACTCAACATATTCGTTAATAAATGCATCATTGACTAACCAGCGCATAACTTGATTGGTTTAGGCACAAATCTACGACCACAAGGTCATGAGTTCAAATCCACACCTCCACATGTTGTACTAAAAAAATATATCATCATTGAATAAATTGATTTATTATTATTATTTTTAGTAACATGCATGGGTGGAGATCCGAATGATCTGAGATAGATGTCTTAAGTTATGCTTAGATTGACAATTAATCAATTAATTATTAGTAGCATGTCTAACTGTTCAAATATGTCAATGAAACAATAATTTACTAACACAATAAATTTTTTGTTGTAAATTTTAAAGATTTTATTTTATTTTTTCGAAGAATCTAATTGAAAATGTCTAATTCATAAATGATAAAATTGAGCCCCTTAAAGGCGAATGTAGAGAATTTAGAATCCATTTGGTATATTTAAGAAAAACGAGATTAAAAATCATAGACAATTTCACTAAAAAACAAGTTAAACTTTAGTGAGATCAAATAGCCATGTATTTTCTAAACTACAATAGATAGTGAGTTTTATATATAACAAAAAAACCAAGAACAATATTTTAAGTAGTATTGATGCGGTGTCAAGTTAAAACCATCTAATAGTTGAGATATAAAATATAATGAAAGGAAGTAAAGATAACCAATGTTAGAATATTTAACTCGAAATCAAATGACATACTACAATTTATTATACCCAATAGAAAAAAGAAAGAAAAACTCTAATCGAAATGACATATGTTCAATGATGTTTGTAGGGTGGAGATTACCACCAATAATAGATAGGGCATACCTTTATTAATATTATTCGTTAAAGAATGTAAACATGTAATGGAAAATGTTTGGTGAATATCGAAATAATGTTTTAATCAGCTGAGTGTAGACAAAATATTTTATTTATTTATTATTATTGTTATTATTATTATTATTTTTTTATCTATTTGAACAAACAATTGTCATTGTCATTTGCAGTTTTTTAAGTAACAAATTTAAAATAATTTCAGAAGATGCTCCAATCATAAAACGGAGGGGAGGGGAAAAGACTGCGTTCGGCTTTCCTCATCCCTCAAATATTATGCGTCAGGGAATTTAGCCCTTTTCTCTGTGATTCTCTTTCCCTATCGATTAGGGCTCACAAACACCATTTTTGTTTCTGAACCAAACATCTCCGCGATCTGCTACTTAGGTACTTTCCTATCTCTGATTTCTCTGATTGACATTTAGCCATTTTGATATGTCGTGGATTCCATCTCCGATCTTCTCGCTCTCAGCACCTCTACATCGCTTCTTCTTCGTCTTCGCTGTTCGTCAAATTTCATTTTCATCTATCAATCACGATCCTAGGGTTTACGGACACACATCCAAGTTTATGTCGTTTGTGGTTCTACTCTGAAGGATTATTTAGTTCCATGTAGTTGAAACTGCTTATGGTTTAGAAGAACCAGTCCAGGTACAGTTTGGCCACAGGAGCAAACGTTTACGATTCACTTTCTGGGAGAGACATTCACTGACCGAGTCTAATATAACTATATCTATTTCTGGACCTCCCCATGTTTCGCTTGAAGTTTCTGAACATGCACTTTTGAATAGATAGATTTAGTTTAGTTATGTCCGTATCTGGACGGCGATATCGTATTTGTCTATGGAAGGTAAATGAGAGTATCCATGTCGAGGCCGCTTTTAAACATGCAATCCCTTAGGAAACTACTGATAGGTTACATTATGGCTTGAACTCAGTCGCACGTCACTTTTAGGAGTTCTACGGACCTTCTCCCAGGTTAAACCTGTGGTTTTCTTATGAAGGTTTGGAATTGGATCTAATAATTTTCGTTTCCACCCTATTTCTCCTGCTGCAAATCTTAGTTTTAGAAGCCGCCTAGACTCCAGTGACTTGAACAAAATGCGAGACGACAAAAGGAAACTCAGTTCTTAAAGCGGCCTGGGACTTGTGCTTGACTTTTTGAGTCAGCAAGGGAATGGTTATATGATTGAGCCTTGAAGCATATCTGAACTCCTTGTTTTTCATACTCTATTGACTATGCCTGATCAGGTTTATTTTTGGTATTTTGATCTTACTTCTGGGTTACTCTTCTAATATACTGTTATTTTCAGGTTGTAATTTTGATTTGCAATAAAGATTTTCAAATAGCTTCTCTATCTTTTGGCTCCCCAAAGACTGGAACGGCTGTTTTCGGCGAAGGAATGAAATTTGCATAAAACTTTTATGCTCACCTCATGCCATGTCGGGTTTACTCAATGTATTGTCAGCTATCTACATTTCGATATGTCTATGATTGCACTGTGACATGTGCATTGAGTTGTGCTACATACTATTTATTTGAGCTTACTAGAGATACTCTCATTGCCTTATGTGATTCCCTTTCGCTTATAATTCCGGGAACTTGTTGCATGAATTTTCGGAAGCCAAGAAATCTAATTAATTAATTAATCTTTTTTGTCTAATACCTCTAGTTAGGATTTTAATTTTAATTGGTTCAAGAATTTTTTGTTACATAAGAATGCAGTTCTTTTGATTCTTCAAATTCTATTCTTATAGAATCCATAATTCTCATTTCTATTTGATCTAGGCTATTTAATCTTATCTTTATAATAATCAACAACACAATCACGTGCCTTTGTGTGTGAACTTATTTGGACATAGTATTATAATTCTACTGCCAAACTTTGTGCTTCAAGTTCAAAATTTCACGCGAAAACATGATTTTTTAATTGCCAAAGATTTTGTTCTTTGCAGTCATCTCTTAGTGGATCAGCTTCAAATCTTCCAGATGGTACTGGACGATCTTTTACTGCCTCATTTTCTGGTCAGTCTGGTGCAGCCTCTCCTGTTTTCCATCACACTGGTGGGTGCATGTTCCTAGAGTTTTAATAGTTTTTGTTCAAATTTATGAAACTTATAGGTCTCGATTTTCAGGAACTATTCAAGGGCTGCATAACATACATGGGAGCTTCAATGTTCAAAACATGTCAGGTGCACTAACTTCAAGAAATTCAACGATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACACTATCAAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGGTATTTTTCAAGGGCAGGCCATTTGTTTATAATTCAATGCCGTGTTTATTGAGTGTGATTCTTAGCACCAGTTTTCCTGTAGTTTATTTGAGTGCTGTTTATTGTGGTCAGGTCACAAAAAATTAGCTCTTGCATGATAACGTTTAGCAAATAAAAGTACACTTGTTTATAAATATTTTTGAAGAACTGTTGTAATTATTATAGAAGAAGACATGTACTCTTGAATAACTTTATTGAAGAAAAGGTGATTGAGAGCTGCTTTACTAATTGGATAATGAATCATAATGTTCCTGTTATTGGATTTTTCCAAGTACTGAAATTATATTTGACTGTTAAATGACATCTTTTAAAAGAACTAGAAGCAACAGAGGCAGAATCCTAATATTTTCCTCTCACAGACCAATATAATTGTTTATGTGCTTCCTCTCCATTTTTACCGTTTTCTTCTCTTCTGTAGTTGTCTCACGGCAGCTCTCATGGGCACTCAGGAGTCGCAAATAGAGGAGGTATAAATGTTGTAGGAAACCCTGGATTTAGTAGCAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTTTGTCTACTTCTGCAGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGGGTGTCCCCGATTTTGGGAAATGCGGGTACTCGTATCACAAGTTCAATGGGGAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTTCTGGTGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTAAACATTAGTGCAAATAGTGGATCTGGAAGTTTAACCGTGCAAGGACAAAACCGTTTAATGGGTGGTGTTCTTCCACAAGGTACAGTTCCTTGACTTTCTGTATGAGTGCTCATATTTATGTACACTGTCCAACGTCTCAGTAATATTATTAGTCTGTACTTGGTTCTCTGATCACTGCATGCGGGCCGGTATGTAGATGTGTCTTACAGTAATGGTGTCAACCTTTACAAATGAATTTCCCATTCATTAACTGCTGAACAACTATTTCTTTCCTGCATAATTTAGTGCTAACTAGTCATAGCGGGAAAATGTTATATCCTCCCTCTTGTACTCTTTTTTTTCTAAAATAGAAAAGATCATATTAGATGTTAGTCTAAAAATTAATCATCTTGTTCCGTTTGAAAGAGTGGCATGCAAAATGGAAACTAGTTACTCACTTTACTTTGTTTCCTTGTTCCATTTTATTCGATATTCATATTTATTCGATGTATTGGTTTTTTATGATTAAGTTGCATGTTCTGAAGTTCGGTCATTCTCTCCATGGATGTGCTTTTTTTACATTTTTCCTACAAATATCTTATATATGATGCTCTACTCACTGCAAAATGGAAATGCAGTCATGATTATGCTTTTTTATATATGCACGTCTCTGTATAAATGCTACTTTTTAGTTAACAATGTTCTATGCTATTTTGCCGTTGATGACATTTTCTTGCTTCAGGATCTCAACAGGTTATTTCTATGTTGGGTAGTTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAAAACCATATACAGAGTGTGAATAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAATGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGTTGTCTAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGGCAATTAAGTTAGTAACTGGATATTGTTGGGGTTTTTTAATTTTGTTTACTTTTCCTCTGTACCTACTTTGACCTTTAGGAATTTCATGTAATTGTTTCAGGTTCGCTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAGGAGTTCAGCATTCAAAATGAAGATTTTCCAGCCTTGCCGAGATTTAAAGGTGCAAAGCTCTTCGTTGCTTCCAGTAGGTTGTATTCATGTAAATCATATACCACAACCTTGGCTGCTGCCTTCTGCTCCTATCATTTTCATAGAATAAGTACAATAATTTTGGAGAACTATTGTCTGGAAATGTCCTAGTTGACCATGATTTATAGTTCAACAGATTAAGTAGAATTTCAGATTTTGGGTACTCAAGTAGGCCGTTGCAATTGTTAAGCTCTGGTTCTACTTCATGGAGAGTTCTGAATTGTTTTTATGTTATCTGCTTGGTTCTAAATTCATCTCCTCATATAAAACACATTAACCCTGTGCTTACTTCGAATATATACGAGACACTATCTATCATTGATTATGGTTCTTGATCTAGTGCAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGACAGAACAACATGAAAATTCTGTGCCTATGGTGCAGTCTCAGCAGTTCTCTGTGGGAACACTTTTTACTCTCCCTTCTGCTGACTATCCCCATTTGGTTATGGGCTACTAATCATTTTTTCCATTGCTGTTTTGTTTTTAAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAGCAGCAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCGTTTTCACCTGGAAATAATCAGGATCTTCTTCATTTACATGGATCCGATATTTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGGTGTGCAATTGTATTACTGTAGGAGGTTAAATTTTTATCCCTCGCAGTTTTATTTCTCATTCTGCAAGCACAAAGAATCAACCTATTGCTCAGACTTTTTATTTCTTGTCCAATTGTTACCATGTATTATAAGAATTTAACGGGTTTGCTTTGTAGATGATCAATTAGTAGCTTATATGTCTTAAATGTCATCCCCATTTAAGTTTTTCAATATCAATGTTTGTTTGTTCTTGTTCAGTCTAGTGGACCTCCTGGAATTGGTTTAAGACCCCTGAACTCTCCTAATTCAGCTTCTGGAATGAGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCGCAGTTCCGATTGCAACATATGTCTGGCGTTAGCCAGTCATTTAGGGATCAGGGCATGAAATCTATGCAGGCGGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTCGCATCCCTTGCACTTGGAATTGATTTGACCACATTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGGTCCCCATGGTCTGATGAGCCTGCTAAGGGCGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCTCCTACTCTACATGTGAGCTTCTTCAGCTTTCCTCCTCCTGTATATGTGAAGTTTTATACAGTTTCTTCTTAATTGATCATTTCTTGGGTGACTGCAGCAAGGGTACTTCTTAAAGTTCAGTCTAGAGACACTGTTCTATATATTCTTCAGGTGTGATATTATCAAATAATATTGCATTTTGTTTCCTCGTTTTAAATTATGATTGTTTTACTAATATATAATTCTGCTCCGTCTTGTTCTGCTGTAGTATGCCAAAAGATGAAGCTCAGTTGTATGCAGCAAATGAACTGTAAGCTCTAATCATTGACTACTGTGCAGCTTGTTATATTCACCAAAGTCATTGAAAGTAATTTTTGGGTAGACCTTTTCCTAAGAGCTATTGCCAACAGTATTATGATTATTATTATTTTTGGTAGTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGGTTCTGGTTCATTCGGGTCCCTAACATTGAACCACTTGTGAAGACGAGCACTTACGAGAGAGGATCGTATCACTGTTTCGACCCCCACACATTTGAAACTGTCCGCAAGGTTTGGACTTTGTCAATTCTCTCTCTTTTAAATTATTTACGGTCTATGTTGTCCCCATTCCCATTGCTCAGCTTACGTCCATTTGCTTCAGGATAATTTCGTCCTGCACTACGAGATGTTAGAAAAGAGACCAGCTCTACCTCAACAT

mRNA sequence

TTGCAGTCATCTCTTAGTGGATCAGCTTCAAATCTTCCAGATGGTACTGGACGATCTTTTACTGCCTCATTTTCTGGTCAGTCTGGTGCAGCCTCTCCTGTTTTCCATCACACTGGAACTATTCAAGGGCTGCATAACATACATGGGAGCTTCAATGTTCAAAACATGTCAGGTGCACTAACTTCAAGAAATTCAACGATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACACTATCAAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGTTGTCTCACGGCAGCTCTCATGGGCACTCAGGAGTCGCAAATAGAGGAGGTATAAATGTTGTAGGAAACCCTGGATTTAGTAGCAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTTTGTCTACTTCTGCAGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGGGTGTCCCCGATTTTGGGAAATGCGGGTACTCGTATCACAAGTTCAATGGGGAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTTCTGGTGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTAAACATTAGTGCAAATAGTGGATCTGGAAGTTTAACCGTGCAAGGACAAAACCGTTTAATGGGTGGTGTTCTTCCACAAGGATCTCAACAGGTTATTTCTATGTTGGGTAGTTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAAAACCATGTGCAGAGTGTGAATAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAATGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGCTGTCTAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGGCAATTAAGTTCGCTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAGGAGTTCAGCATTCAGAATGAAGATTTTCCAGCCTTGCCGAGATTTAAAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGACAGAACAACATGAAAATTCTGTGCCTATGATGCAGTCTCAGCAGTTCTCTATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAGCAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCACCTGGAAATAATCAGGATCTTCTTCATTTACATGGATCCGATATTTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGTCTAGTGGACCTCCTGGAATTGGTTTAAGACCCCTGAACTCTCCTAATTCAGCTTCTGGAATGAGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCCCAGTTCCGATTGCAACATATGTCTGGCGTTAGCCAGTCATTTAGGGATCAGGGCATGAAATCTATGCAGGCGGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCACTCGGAATTGATTTGACCACATTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGGTCCCCATGGTCTGATGAGCCTGCTAAGGGCGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCTCCTACTCTACATCAAGGGTACTTCTCAAAATTCAGGCTGGAGACACTGTTTTATATATTTTTCAGCATGCCAAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAGCACTTATGAAAGAGGATCGTATCACTGTTTCGACCCAAACACATTTGAAACTGTGCGCAAGGATAATTTCGTCCTGCACTACGAGATGTTAGAAAAGAGACCAGCTCTACCTCAACAT

Coding sequence (CDS)

TTGCAGTCATCTCTTAGTGGATCAGCTTCAAATCTTCCAGATGGTACTGGACGATCTTTTACTGCCTCATTTTCTGGTCAGTCTGGTGCAGCCTCTCCTGTTTTCCATCACACTGGAACTATTCAAGGGCTGCATAACATACATGGGAGCTTCAATGTTCAAAACATGTCAGGTGCACTAACTTCAAGAAATTCAACGATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGAACACTATCAAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGTTGTCTCACGGCAGCTCTCATGGGCACTCAGGAGTCGCAAATAGAGGAGGTATAAATGTTGTAGGAAACCCTGGATTTAGTAGCAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTTTGTCTACTTCTGCAGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGGGTGTCCCCGATTTTGGGAAATGCGGGTACTCGTATCACAAGTTCAATGGGGAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTTCTGGTGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTAAACATTAGTGCAAATAGTGGATCTGGAAGTTTAACCGTGCAAGGACAAAACCGTTTAATGGGTGGTGTTCTTCCACAAGGATCTCAACAGGTTATTTCTATGTTGGGTAGTTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAAAACCATGTGCAGAGTGTGAATAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAATGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGCTGTCTAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGGCAATTAAGTTCGCTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAGGAGTTCAGCATTCAGAATGAAGATTTTCCAGCCTTGCCGAGATTTAAAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGACAGAACAACATGAAAATTCTGTGCCTATGATGCAGTCTCAGCAGTTCTCTATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAGCAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCACCTGGAAATAATCAGGATCTTCTTCATTTACATGGATCCGATATTTTCCCATCTTCACATGCTGCATCCTATCACCAGCAGTCTAGTGGACCTCCTGGAATTGGTTTAAGACCCCTGAACTCTCCTAATTCAGCTTCTGGAATGAGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCCCAGTTCCGATTGCAACATATGTCTGGCGTTAGCCAGTCATTTAGGGATCAGGGCATGAAATCTATGCAGGCGGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCACTCGGAATTGATTTGACCACATTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGGTCCCCATGGTCTGATGAGCCTGCTAAGGGCGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCTCCTACTCTACATCAAGGGTACTTCTCAAAATTCAGGCTGGAGACACTGTTTTATATATTTTTCAGCATGCCAAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAGCACTTATGAAAGAGGATCGTATCACTGTTTCGACCCAAACACATTTGAAACTGTGCGCAAGGATAATTTCGTCCTGCACTACGAGATGTTAGAAAAGAGACCAGCTCTACCTCAACAT

Protein sequence

LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNIGRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPSAGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH

Homology

[Close]

BLAST of MS020679 vs. NCBI nr
Match: XP_022146127.1 (probable NOT transcription complex subunit VIP2 isoform X2 [Momordica charantia])

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 650/659 (98.63%), Postives = 653/659 (99.09%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SSLSGSASNLPDG+GRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL
Sbjct: 5   LNSSLSGSASNLPDGSGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALS LSHGSSHGHSGVANRG INVVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSXLSHGSSHGHSGVANRGXINVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYP+
Sbjct: 185 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPT 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+QSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPM QSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRP-QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 420
           AGFNLGSTYSHRP QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS
Sbjct: 365 AGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 424

Query: 421 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 480
           SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA
Sbjct: 425 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 484

Query: 481 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 540
           AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK
Sbjct: 485 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 544

Query: 541 GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 600
           GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH
Sbjct: 545 GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 604

Query: 601 KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRP LPQH
Sbjct: 605 KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPVLPQH 663

[Close]

BLAST of MS020679 vs. NCBI nr
Match: XP_022146126.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Momordica charantia])

HSP 1 Score: 1254.2 bits (3244), Expect = 0.0e+00
Identity = 645/659 (97.88%), Postives = 650/659 (98.63%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SSLSGSASNLPDG+GRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL
Sbjct: 5   LNSSLSGSASNLPDGSGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALS LSHGSSHGHSGVANRG INVVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSXLSHGSSHGHSGVANRGXINVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYP+
Sbjct: 185 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPT 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+QSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPM QSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRP-QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 420
           AGFNLGSTYSHRP QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS
Sbjct: 365 AGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 424

Query: 421 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 480
           SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA
Sbjct: 425 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 484

Query: 481 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 540
           AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK
Sbjct: 485 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 544

Query: 541 GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 600
           GDPDFNVPQCYLIKPPPTLHQGYF KF LETLFYIFFSMPKDEAQLYAANELYNRGWFYH
Sbjct: 545 GDPDFNVPQCYLIKPPPTLHQGYFLKFSLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 604

Query: 601 KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           KEHRFWFIRV N+EPLVK STYERGSYHCFDP+TFETVRKDNFVLHYEMLEKRPALPQH
Sbjct: 605 KEHRFWFIRVPNIEPLVKMSTYERGSYHCFDPHTFETVRKDNFVLHYEMLEKRPALPQH 663

[Close]

BLAST of MS020679 vs. NCBI nr
Match: XP_023532179.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 617/658 (93.77%), Postives = 640/658 (97.26%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GSASNLPDGTGRSF  SFSGQSGAASPVFHH+GTIQGLHNIHG+FN+QNMSGAL
Sbjct: 5   LNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI+VVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGISVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAG RITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSIT+GGGLSLPGLASRLN+ ANSGSGSLTVQGQNRLM GVLPQGSQQVISML +SYPS
Sbjct: 185 GRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+Q+VNSL+SLGMLNDVNS+DNSPFDINDFPQL+SRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQ +QHENSVP+MQSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSS 420
           AGFNLGSTYSHRPQQQQQHSPAVSNSTVSF P NNQDLLHLHGSDIFPSSHAASYHQQSS
Sbjct: 365 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSS 424

Query: 421 GPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAA 480
           GPPGIGLRPL+SPNS SGM YDQLIQQYQQHH Q QFRLQHMSGVSQSFRDQGMKSMQAA
Sbjct: 425 GPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAA 484

Query: 481 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 540
           QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG
Sbjct: 485 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 544

Query: 541 DPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 600
           DPDFNVPQCYLIKPPP+LHQGYFSKF LETLFYIFFSMPKDEAQLYAANELYNRGWFYHK
Sbjct: 545 DPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 604

Query: 601 EHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           EHRFWFIRVSNMEPLVKTS+YERGSY CFDP+TFETVRKDNFVLHYEM+EKRPALPQH
Sbjct: 605 EHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKDNFVLHYEMVEKRPALPQH 662

[Close]

BLAST of MS020679 vs. NCBI nr
Match: XP_022947126.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 616/658 (93.62%), Postives = 639/658 (97.11%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GSASNLPDGTGRSF  SFSGQSGAASPVFHH+GTIQGLHNIHG+FN+QNMSGAL
Sbjct: 5   LNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSHGSSHGHSGV NRGGI+VVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGISVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAG RITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSIT+GGGLSLPGLASRLN+ ANSGSGSLTVQGQNRLM GVLPQGSQQVISML +SYPS
Sbjct: 185 GRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+Q+VNSL+SLGMLNDVNS+DNSPFDINDFPQL+SRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQ +QHENSVP+MQSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSS 420
           AGFNLGSTYSHRPQQQQQHSPAVSNSTVSF P NNQDLLHLHGSDIFPSSHAASYHQQSS
Sbjct: 365 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSS 424

Query: 421 GPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAA 480
           GPPGIGLRPL+SPNS SGM YDQLIQQYQQHH Q QFRLQHMSGVSQSFRDQGMKSMQAA
Sbjct: 425 GPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAA 484

Query: 481 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 540
           QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG
Sbjct: 485 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 544

Query: 541 DPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 600
           DPDFNVPQCYLIKPPP+LHQGYFSKF LETLFYIFFSMPKDEAQLYAANELYNRGWFYHK
Sbjct: 545 DPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 604

Query: 601 EHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           EHRFWFIRVSNMEPLVKTS+YERGSY CFDP+TFETVRKDNFVLHYEM+EKRPALPQH
Sbjct: 605 EHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKDNFVLHYEMVEKRPALPQH 662

[Close]

BLAST of MS020679 vs. NCBI nr
Match: XP_023007439.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 613/658 (93.16%), Postives = 639/658 (97.11%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GSASNLPDG+GRSF  SFSGQSGAASPVFHH+G+IQGLHNIHG+FN+QNMSGAL
Sbjct: 5   LNSSVNGSASNLPDGSGRSFANSFSGQSGAASPVFHHSGSIQGLHNIHGNFNLQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTG +SSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI+VVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGAISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGISVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAG RITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSIT+GGGLSLPGLASRLN+ ANSGSGSLTVQGQNRLM GVLPQGSQQVISML +SYPS
Sbjct: 185 GRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+Q+VNSL+SLGMLNDVN++DNSPFDINDFPQL+SRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQNVNSLNSLGMLNDVNASDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQ +QHENSVP+MQSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSS 420
           AGFNLGSTYSHRPQQQQQHSPAVSNSTVSF P NNQDLLHLHGSDIFPSSHAASYHQQSS
Sbjct: 365 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSS 424

Query: 421 GPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAA 480
           GPPGIGLRPL+SPNS SGM YDQLIQQYQQHH Q QFRLQHMSGVSQSFRDQGMKSMQAA
Sbjct: 425 GPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAA 484

Query: 481 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 540
           QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG
Sbjct: 485 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 544

Query: 541 DPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 600
           DPDFNVPQCYLIKPPP+LHQGYFSKF LETLFYIFFSMPKDEAQLYAANELYNRGWFYHK
Sbjct: 545 DPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 604

Query: 601 EHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           EHRFWFIRVSNMEPLVKTS+YERGSY CFDP+TFETVRKDNFVLHYEM+EKRPALPQH
Sbjct: 605 EHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKDNFVLHYEMVEKRPALPQH 662

[Close]

BLAST of MS020679 vs. ExPASy Swiss-Prot
Match: Q52JK6 (Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana OX=4100 GN=VIP2 PE=1 SV=1)

HSP 1 Score: 907.1 bits (2343), Expect = 1.1e-262
Identity = 469/606 (77.39%), Postives = 527/606 (86.96%), Query Frame = 0


Query: 56  MSGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGG 115
           M G LTSRN+ INNVPS GVQQ    LS GRF  NNLP ALSQ+  G+SHGHSG+ +RGG
Sbjct: 1   MQGTLTSRNTAINNVPSSGVQQSGNNLSGGRFVPNNLPSALSQIPQGNSHGHSGMTSRGG 60

Query: 116 INVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMV 175
            +VVGNPG+SS+TN VGGSIPGIL T AAIGNR++VPGLGVSPILGNAG R+T+S+GN+V
Sbjct: 61  TSVVGNPGYSSNTNGVGGSIPGILPTFAAIGNRSSVPGLGVSPILGNAGPRMTNSVGNIV 120

Query: 176 SGGNIGRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLG 235
            GGNIGRSI+SG GLS+PGLASRLN++ANSGSG+L VQG NRLM GVL Q S QV+SMLG
Sbjct: 121 GGGNIGRSISSGAGLSVPGLASRLNMNANSGSGNLNVQGPNRLMSGVLQQASPQVLSMLG 180

Query: 236 SSYPSAGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQL 295
           +SYP AGGPLSQNHVQ++ + +S+G+LNDVNSND SPFDINDFPQLSSRPSSAGGPQGQL
Sbjct: 181 NSYP-AGGPLSQNHVQAIGNFNSMGLLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGQL 240

Query: 296 SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQ-HENSVPMMQSQQ 355
            SLRKQGLSPIVQQNQEFSIQNEDFPALP FKGGNADY MD HQ EQ H+N++ MMQ Q 
Sbjct: 241 GSLRKQGLSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDPHQKEQLHDNTLSMMQQQH 300

Query: 356 FSIGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAA 415
           FS+GRSAGFNLG TY S+RPQQQ QH+P+VS+  VSFS  NNQDLL LHGSD+F SSH +
Sbjct: 301 FSMGRSAGFNLGGTYSSNRPQQQLQHAPSVSSGGVSFSNINNQDLLSLHGSDVFQSSH-S 360

Query: 416 SYHQQSSGPPGIGLRPLNSPNSASGM-SYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQ 475
           SY QQ  GPPGIGLRPLNS  + SG+ SYDQLIQQYQQH GQSQFRLQ MS + Q FRDQ
Sbjct: 361 SYQQQGGGPPGIGLRPLNSSGTVSGIGSYDQLIQQYQQHQGQSQFRLQQMSTLGQPFRDQ 420

Query: 476 GMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSP 535
            +KSMQ +Q +PDPFG+LGLLSVIR+SDPDL SLALGIDLTTLGLNLNSA+NL+KTFGSP
Sbjct: 421 SLKSMQ-SQVAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSAENLYKTFGSP 480

Query: 536 WSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELY 595
           WSDEPAKGDP+F VPQCY  K PP L+Q YFSKF+L+TLFYIF+SMPKDEAQLYAANELY
Sbjct: 481 WSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKFQLDTLFYIFYSMPKDEAQLYAANELY 540

Query: 596 NRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKR 655
           NRGWFYH+EHR WF+RV+NMEPLVKT+ YERGSY CFDPNT+ET+ KDNFVLH EMLEKR
Sbjct: 541 NRGWFYHREHRLWFMRVANMEPLVKTNAYERGSYICFDPNTWETIHKDNFVLHCEMLEKR 600

Query: 656 PALPQH 659
           P LPQH
Sbjct: 601 PVLPQH 603

[Close]

BLAST of MS020679 vs. ExPASy Swiss-Prot
Match: Q9FPW4 (Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=2)

HSP 1 Score: 792.0 bits (2044), Expect = 5.3e-228
Identity = 434/661 (65.66%), Postives = 515/661 (77.91%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SSL+GSASNLPDG+GRSFTAS+SGQSGA SP FHHTG +QGLHNIHG++NV NM G L
Sbjct: 4   LHSSLNGSASNLPDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTL 63

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNS++N++PS GVQQP G+ SSGRFASNNLPV LSQLSHGSSHGHSG+ NR G+NVVG
Sbjct: 64  TSRNSSMNSIPSAGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNR-GLNVVG 123

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSS+ N VGGSIPGILSTSA + NRN+VPG+G+S +LGN+G RIT+SMGNMV GGN+
Sbjct: 124 NPGFSSNANGVGGSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNL 183

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GR+I+S GGLS+PGL+SRLN++ANSGSG L VQGQNR+MGGVLPQGS QV+SMLG+SY +
Sbjct: 184 GRNISS-GGLSIPGLSSRLNLAANSGSG-LNVQGQNRMMGGVLPQGS-QVMSMLGNSYHT 243

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDI-NDFPQLSSRPSSAGGPQGQLSSLR 300
            GGPLSQNHVQSVN++    ML+D + ND+S FDI NDFPQL+SRP SAGG QG L SLR
Sbjct: 244 GGGPLSQNHVQSVNNM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLR 303

Query: 301 KQGLS-PIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQ-HENSVPMMQSQQFSI 360
           KQGL  P+VQQNQEFSIQNEDFPALP +KGGN++Y MD+HQ EQ H+N++ MM SQ FS+
Sbjct: 304 KQGLGVPLVQQNQEFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSMMHSQNFSM 363

Query: 361 GRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYH 420
           GRS GFNLG+TY SHRPQQQ QH+                                    
Sbjct: 364 GRSGGFNLGATYSSHRPQQQPQHT------------------------------------ 423

Query: 421 QQSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKS 480
             + G  G+GLRPL+SPN+ S + YDQLIQQYQQH  QSQF +Q MS ++Q FRD  MKS
Sbjct: 424 SSTGGLQGLGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSINQ-FRDSEMKS 483

Query: 481 MQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDE 540
               QS  DPF LLGLL V+  S+P+L SLALGIDLTTLGL+LNS  NL+KTF SPW++E
Sbjct: 484 ---TQSEADPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNLYKTFASPWTNE 543

Query: 541 PAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGW 600
           PAK + +F VP CY    PP L +  F +F  E LFY F+SMPKDEAQLYAA+ELY RGW
Sbjct: 544 PAKSEVEFTVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQLYAADELYERGW 603

Query: 601 FYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALP 658
           FYHKE R WF RV   EPLV+ +TYERG+Y   DPN+F+TVRK++FV+ YE++EKRP+L 
Sbjct: 604 FYHKELRVWFFRVG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVIKYELMEKRPSLL 613

[Close]

BLAST of MS020679 vs. ExPASy Swiss-Prot
Match: Q8C5L3 (CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-32
Identity = 168/621 (27.05%), Postives = 252/621 (40.58%), Query Frame = 0


Query: 55  NMSGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRG 114
           +M GA  SR   +  V S    +      S  F   +    L+  S        G +  G
Sbjct: 20  SMFGA--SRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYG 79

Query: 115 GINVVGNP--GFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMG 174
             + +G P  G S++T  +  S+       + +     VP + +      +   +  +  
Sbjct: 80  QQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPR 139

Query: 175 NMVSGGNIGRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVIS 234
           NM++   +G+ I         G+ SR N  ++SG GS      NR    ++    QQ   
Sbjct: 140 NMMNHSQVGQGI---------GIPSRTNSMSSSGLGS-----PNRSSPSIICMPKQQPSR 199

Query: 235 MLGSSYPSAGGPLSQNHVQSVNSLSSLGMLNDVNSNDN-SPFDINDFPQLS--SRPSSAG 294
              +    +G  +++N    +N+  S  + N  + ++N +  D++DFP L+  +R   +G
Sbjct: 200 QPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSG 259

Query: 295 GPQGQLSSLRKQG------LSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQH 354
            P   ++ L  +         P  +Q+Q+FSI NEDFPALP                   
Sbjct: 260 NPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP------------------- 319

Query: 355 ENSVPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNS--TVSFSPGNNQDLLHL 414
                                 GS+Y             +S S  T S + G        
Sbjct: 320 ----------------------GSSYKDPTSSNDDSKSNLSTSGKTTSSTDGPK------ 379

Query: 415 HGSDIFPSSHAASYHQQSSGPPGIGLRPLNS-PNSASGMSYDQLIQQYQQHHGQSQFRLQ 474
                FP   +++    +    GI + P     N   GM  DQ                 
Sbjct: 380 -----FPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQ----------------- 439

Query: 475 HMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRL--SDPDLASLALGIDLTTLGLN 534
                                     FG++GLL+ IR   +DP +  LALG DLTTLGLN
Sbjct: 440 --------------------------FGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLN 499

Query: 535 LNSADNLHKTFGSPWSDEPAK-GDPDFNVPQCYL--IKPPPTLHQGYFSKFRLETLFYIF 594
           LNS +NL+  F SPW+  P +  D DF+VP  YL  I     L      ++  + LFY++
Sbjct: 500 LNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLY 528

Query: 595 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFE 654
           +    D  QL AA EL+NR W YHKE R W  R   MEP +KT+TYERG+Y+ FD   + 
Sbjct: 560 YMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWR 528

Query: 655 TVRKDNFVLHYEMLEKRPALP 657
            V K+ F L Y+ LE+RP LP
Sbjct: 620 KVAKE-FHLEYDKLEERPHLP 528

[Close]

BLAST of MS020679 vs. ExPASy Swiss-Prot
Match: Q9NZN8 (CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-31
Identity = 167/618 (27.02%), Postives = 258/618 (41.75%), Query Frame = 0


Query: 55  NMSGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRG 114
           +M GA  SR   +  V S    +      S  F   +    L+  S        G +  G
Sbjct: 20  SMFGA--SRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYG 79

Query: 115 GINVVGNP--GFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMG 174
             + +G P  G S++T  +  S+       + +     VP + +      +   +  +  
Sbjct: 80  QQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPR 139

Query: 175 NMVSGGNIGRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVIS 234
           NM++   +G+ I         G+ SR N  ++SG GS      NR    ++    QQ   
Sbjct: 140 NMMNHSQVGQGI---------GIPSRTNSMSSSGLGS-----PNRSSPSIICMPKQQPSR 199

Query: 235 MLGSSYPSAGGPLSQNHVQSVNSLSSLGMLNDVNSNDN-SPFDINDFPQLS--SRPSSAG 294
              +    +G  +++N    +N+  S  + N  + ++N +  D++DFP L+  +R   +G
Sbjct: 200 QPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSG 259

Query: 295 GPQGQLSSLRKQG------LSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQH 354
            P   ++ L  +         P  +Q+Q+FSI NEDFPALP                   
Sbjct: 260 NPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALP------------------- 319

Query: 355 ENSVPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHG 414
                                 GS+Y           P  SN        +++  L+  G
Sbjct: 320 ----------------------GSSYK---------DPTSSND-------DSKSNLNTSG 379

Query: 415 SDIFPSSHAASYHQQSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMS 474
                                       + +S  G  +        Q++ Q +  +Q + 
Sbjct: 380 ---------------------------KTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLP 439

Query: 475 GVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRL--SDPDLASLALGIDLTTLGLNLNS 534
               +   QGM +        D FG++GLL+ IR   +DP +  LALG DLTTLGLNLNS
Sbjct: 440 DGRVTNIPQGMVT--------DQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNS 499

Query: 535 ADNLHKTFGSPWSDEPAK-GDPDFNVPQCYL--IKPPPTLHQGYFSKFRLETLFYIFFSM 594
            +NL+  F SPW+  P +  D DF+VP  YL  I     L      ++  + LFY+++  
Sbjct: 500 PENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMN 528

Query: 595 PKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVR 654
             D  QL AA EL+NR W YHKE R W  R   MEP +KT+TYERG+Y+ FD   +  V 
Sbjct: 560 GGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVA 528

Query: 655 KDNFVLHYEMLEKRPALP 657
           K+ F L Y+ LE+RP LP
Sbjct: 620 KE-FHLEYDKLEERPHLP 528

[Close]

BLAST of MS020679 vs. ExPASy Swiss-Prot
Match: P87240 (General negative regulator of transcription subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=not2 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 6.2e-27
Identity = 72/186 (38.71%), Postives = 103/186 (55.38%), Query Frame = 0


Query: 480 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADN---LHKTFGSPWSDE 539
           A  +   + L  LL +IR+ D ++++L LG DL  LG +L   +    +     SPW++ 
Sbjct: 123 ADENAKQYMLESLLPIIRMEDSEMSTLQLGCDLAALGFDLAPVEEDRLISTNLFSPWAEL 182

Query: 540 PAK---GDPDFNVPQCYL-IKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELY 599
             K     P F +P CY  + PPP + + +  +F  ETLFYIF++MP+D  Q  AA EL 
Sbjct: 183 NTKKPVSQPMFKLPACYKNVNPPPAISKIF--QFSDETLFYIFYTMPRDVMQEAAAQELT 242

Query: 600 NRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKR 659
           NR W +HKE R W   V  M+PL +T  +ERG Y  FDP  ++ ++KD F+L Y  LE R
Sbjct: 243 NRNWRFHKELRVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKD-FLLMYAALEDR 302

[Close]

BLAST of MS020679 vs. ExPASy TrEMBL
Match: A0A6J1CYQ6 (probable NOT transcription complex subunit VIP2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015420 PE=3 SV=1)

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 650/659 (98.63%), Postives = 653/659 (99.09%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SSLSGSASNLPDG+GRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL
Sbjct: 5   LNSSLSGSASNLPDGSGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALS LSHGSSHGHSGVANRG INVVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSXLSHGSSHGHSGVANRGXINVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYP+
Sbjct: 185 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPT 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+QSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPM QSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRP-QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 420
           AGFNLGSTYSHRP QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS
Sbjct: 365 AGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 424

Query: 421 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 480
           SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA
Sbjct: 425 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 484

Query: 481 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 540
           AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK
Sbjct: 485 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 544

Query: 541 GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 600
           GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH
Sbjct: 545 GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 604

Query: 601 KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRP LPQH
Sbjct: 605 KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPVLPQH 663

[Close]

BLAST of MS020679 vs. ExPASy TrEMBL
Match: A0A6J1CYE2 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015420 PE=3 SV=1)

HSP 1 Score: 1254.2 bits (3244), Expect = 0.0e+00
Identity = 645/659 (97.88%), Postives = 650/659 (98.63%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SSLSGSASNLPDG+GRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL
Sbjct: 5   LNSSLSGSASNLPDGSGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALS LSHGSSHGHSGVANRG INVVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSXLSHGSSHGHSGVANRGXINVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYP+
Sbjct: 185 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPT 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+QSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPM QSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRP-QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 420
           AGFNLGSTYSHRP QQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS
Sbjct: 365 AGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQS 424

Query: 421 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 480
           SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA
Sbjct: 425 SGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQA 484

Query: 481 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 540
           AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK
Sbjct: 485 AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK 544

Query: 541 GDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 600
           GDPDFNVPQCYLIKPPPTLHQGYF KF LETLFYIFFSMPKDEAQLYAANELYNRGWFYH
Sbjct: 545 GDPDFNVPQCYLIKPPPTLHQGYFLKFSLETLFYIFFSMPKDEAQLYAANELYNRGWFYH 604

Query: 601 KEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           KEHRFWFIRV N+EPLVK STYERGSYHCFDP+TFETVRKDNFVLHYEMLEKRPALPQH
Sbjct: 605 KEHRFWFIRVPNIEPLVKMSTYERGSYHCFDPHTFETVRKDNFVLHYEMLEKRPALPQH 663

[Close]

BLAST of MS020679 vs. ExPASy TrEMBL
Match: A0A6J1G5I6 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 616/658 (93.62%), Postives = 639/658 (97.11%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GSASNLPDGTGRSF  SFSGQSGAASPVFHH+GTIQGLHNIHG+FN+QNMSGAL
Sbjct: 5   LNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSHGSSHGHSGV NRGGI+VVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGISVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAG RITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSIT+GGGLSLPGLASRLN+ ANSGSGSLTVQGQNRLM GVLPQGSQQVISML +SYPS
Sbjct: 185 GRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+Q+VNSL+SLGMLNDVNS+DNSPFDINDFPQL+SRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQ +QHENSVP+MQSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSS 420
           AGFNLGSTYSHRPQQQQQHSPAVSNSTVSF P NNQDLLHLHGSDIFPSSHAASYHQQSS
Sbjct: 365 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSS 424

Query: 421 GPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAA 480
           GPPGIGLRPL+SPNS SGM YDQLIQQYQQHH Q QFRLQHMSGVSQSFRDQGMKSMQAA
Sbjct: 425 GPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAA 484

Query: 481 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 540
           QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG
Sbjct: 485 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 544

Query: 541 DPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 600
           DPDFNVPQCYLIKPPP+LHQGYFSKF LETLFYIFFSMPKDEAQLYAANELYNRGWFYHK
Sbjct: 545 DPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 604

Query: 601 EHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           EHRFWFIRVSNMEPLVKTS+YERGSY CFDP+TFETVRKDNFVLHYEM+EKRPALPQH
Sbjct: 605 EHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKDNFVLHYEMVEKRPALPQH 662

[Close]

BLAST of MS020679 vs. ExPASy TrEMBL
Match: A0A6J1L4Y4 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499941 PE=3 SV=1)

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 613/658 (93.16%), Postives = 639/658 (97.11%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GSASNLPDG+GRSF  SFSGQSGAASPVFHH+G+IQGLHNIHG+FN+QNMSGAL
Sbjct: 5   LNSSVNGSASNLPDGSGRSFANSFSGQSGAASPVFHHSGSIQGLHNIHGNFNLQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTG +SSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI+VVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGAISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGISVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAG RITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSIT+GGGLSLPGLASRLN+ ANSGSGSLTVQGQNRLM GVLPQGSQQVISML +SYPS
Sbjct: 185 GRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+Q+VNSL+SLGMLNDVN++DNSPFDINDFPQL+SRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQNVNSLNSLGMLNDVNASDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQ +QHENSVP+MQSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSS 420
           AGFNLGSTYSHRPQQQQQHSPAVSNSTVSF P NNQDLLHLHGSDIFPSSHAASYHQQSS
Sbjct: 365 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSS 424

Query: 421 GPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAA 480
           GPPGIGLRPL+SPNS SGM YDQLIQQYQQHH Q QFRLQHMSGVSQSFRDQGMKSMQAA
Sbjct: 425 GPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAA 484

Query: 481 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 540
           QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG
Sbjct: 485 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 544

Query: 541 DPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 600
           DPDFNVPQCYLIKPPP+LHQGYFSKF LETLFYIFFSMPKDEAQLYAANELYNRGWFYHK
Sbjct: 545 DPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 604

Query: 601 EHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           EHRFWFIRVSNMEPLVKTS+YERGSY CFDP+TFETVRKDNFVLHYEM+EKRPALPQH
Sbjct: 605 EHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKDNFVLHYEMVEKRPALPQH 662

[Close]

BLAST of MS020679 vs. ExPASy TrEMBL
Match: A0A6J1G5K7 (probable NOT transcription complex subunit VIP2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 612/658 (93.01%), Postives = 635/658 (96.50%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GSASNLPDGTGRSF  SFSGQSGAASPVFHH+    GLHNIHG+FN+QNMSGAL
Sbjct: 5   LNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHS----GLHNIHGNFNLQNMSGAL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSHGSSHGHSGV NRGGI+VVG
Sbjct: 65  TSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGISVVG 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAG RITSSMGNMVSGGNI
Sbjct: 125 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNI 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GRSIT+GGGLSLPGLASRLN+ ANSGSGSLTVQGQNRLM GVLPQGSQQVISML +SYPS
Sbjct: 185 GRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQGQLSSLRK 300
           AGGPLSQNH+Q+VNSL+SLGMLNDVNS+DNSPFDINDFPQL+SRPSSAGGPQGQLSSLRK
Sbjct: 245 AGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRK 304

Query: 301 QGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMMQSQQFSIGRS 360
           QGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQ +QHENSVP+MQSQQFSIGRS
Sbjct: 305 QGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRS 364

Query: 361 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYHQQSS 420
           AGFNLGSTYSHRPQQQQQHSPAVSNSTVSF P NNQDLLHLHGSDIFPSSHAASYHQQSS
Sbjct: 365 AGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSS 424

Query: 421 GPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKSMQAA 480
           GPPGIGLRPL+SPNS SGM YDQLIQQYQQHH Q QFRLQHMSGVSQSFRDQGMKSMQAA
Sbjct: 425 GPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAA 484

Query: 481 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 540
           QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG
Sbjct: 485 QSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKG 544

Query: 541 DPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 600
           DPDFNVPQCYLIKPPP+LHQGYFSKF LETLFYIFFSMPKDEAQLYAANELYNRGWFYHK
Sbjct: 545 DPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHK 604

Query: 601 EHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALPQH 659
           EHRFWFIRVSNMEPLVKTS+YERGSY CFDP+TFETVRKDNFVLHYEM+EKRPALPQH
Sbjct: 605 EHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFETVRKDNFVLHYEMVEKRPALPQH 658

[Close]

BLAST of MS020679 vs. TAIR 10
Match: AT1G07705.2 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 847.4 bits (2188), Expect = 7.6e-246
Identity = 456/663 (68.78%), Postives = 528/663 (79.64%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GS SNL DG+GR+FT+SFSGQSGAASPVFHH G+IQGLHNIHG+FNV N++G+L
Sbjct: 5   LNSSINGSTSNLSDGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
            SRNS++N VPS GVQQ  G++S+GRFAS+N+PVALSQ+SHGSSHGHSG+ NRG      
Sbjct: 65  GSRNSSLNGVPSAGVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRG------ 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
                                           GLGVSPILGN G+R+TSSMGNMV GG +
Sbjct: 125 --------------------------------GLGVSPILGNVGSRMTSSMGNMVGGGTM 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GR+++SGGGLS+P L SRLN++ NSGSG++   GQNR+MGGVLPQGS QV+SMLG+SYPS
Sbjct: 185 GRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---GQNRMMGGVLPQGSPQVLSMLGNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDI-NDFPQLSSRPSSAGGPQGQLSSLR 300
           AGG LSQNHVQ++NSLSS+G+LND+NSND SPFDI NDFPQL+SRPSSAG  QGQL S  
Sbjct: 245 AGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGS-QGQLGSRL 304

Query: 301 KQGL--SPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQ-HENSVPMMQSQQFS 360
           KQGL  SPIVQQNQEFSIQNEDFPALP +KG +ADY MD+H  EQ HENSV MMQSQQ S
Sbjct: 305 KQGLGISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLMMQSQQLS 364

Query: 361 IGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASY 420
           +GRS GFNLG  Y SHRPQQQQQH+ AVS+S VS           LHGSDIF SSH   Y
Sbjct: 365 MGRSGGFNLGGAYTSHRPQQQQQHAQAVSSSGVS-----------LHGSDIFSSSH-PPY 424

Query: 421 HQQSSGPPGIGLRPLNSPNSASGMSYD-QLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGM 480
           H Q+ G PGIGLR +NS NS +GM YD QLIQQYQ     +Q+RLQ MS  SQ FRD G+
Sbjct: 425 HSQTGGAPGIGLRSMNSANSITGMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGL 484

Query: 481 KSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWS 540
           KSMQ+ QS+PD FGLLGLLSVI++SDPDL SLALGIDLTTLGLNLNS +NLHKTFGSPWS
Sbjct: 485 KSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWS 544

Query: 541 DEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNR 600
           +EP+K DP+F+VPQCY  K PP LHQG F+K  +ETLFY+F+SMPKDEAQLYAANELYNR
Sbjct: 545 NEPSKVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANELYNR 604

Query: 601 GWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPA 658
           GWFYHKEHR WFIR+   EPLVKT+ YERGSYHCFDPN+FE V+K+NFVL+YEMLEKRP+
Sbjct: 605 GWFYHKEHRLWFIRIG--EPLVKTNAYERGSYHCFDPNSFEIVQKENFVLYYEMLEKRPS 610

[Close]

BLAST of MS020679 vs. TAIR 10
Match: AT5G59710.1 (VIRE2 interacting protein 2 )

HSP 1 Score: 792.0 bits (2044), Expect = 3.8e-229
Identity = 434/661 (65.66%), Postives = 515/661 (77.91%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SSL+GSASNLPDG+GRSFTAS+SGQSGA SP FHHTG +QGLHNIHG++NV NM G L
Sbjct: 4   LHSSLNGSASNLPDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTL 63

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
           TSRNS++N++PS GVQQP G+ SSGRFASNNLPV LSQLSHGSSHGHSG+ NR G+NVVG
Sbjct: 64  TSRNSSMNSIPSAGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNR-GLNVVG 123

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
           NPGFSS+ N VGGSIPGILSTSA + NRN+VPG+G+S +LGN+G RIT+SMGNMV GGN+
Sbjct: 124 NPGFSSNANGVGGSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNL 183

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GR+I+S GGLS+PGL+SRLN++ANSGSG L VQGQNR+MGGVLPQGS QV+SMLG+SY +
Sbjct: 184 GRNISS-GGLSIPGLSSRLNLAANSGSG-LNVQGQNRMMGGVLPQGS-QVMSMLGNSYHT 243

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDI-NDFPQLSSRPSSAGGPQGQLSSLR 300
            GGPLSQNHVQSVN++    ML+D + ND+S FDI NDFPQL+SRP SAGG QG L SLR
Sbjct: 244 GGGPLSQNHVQSVNNM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLR 303

Query: 301 KQGLS-PIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQ-HENSVPMMQSQQFSI 360
           KQGL  P+VQQNQEFSIQNEDFPALP +KGGN++Y MD+HQ EQ H+N++ MM SQ FS+
Sbjct: 304 KQGLGVPLVQQNQEFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSMMHSQNFSM 363

Query: 361 GRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASYH 420
           GRS GFNLG+TY SHRPQQQ QH+                                    
Sbjct: 364 GRSGGFNLGATYSSHRPQQQPQHT------------------------------------ 423

Query: 421 QQSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGMKS 480
             + G  G+GLRPL+SPN+ S + YDQLIQQYQQH  QSQF +Q MS ++Q FRD  MKS
Sbjct: 424 SSTGGLQGLGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSINQ-FRDSEMKS 483

Query: 481 MQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDE 540
               QS  DPF LLGLL V+  S+P+L SLALGIDLTTLGL+LNS  NL+KTF SPW++E
Sbjct: 484 ---TQSEADPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNLYKTFASPWTNE 543

Query: 541 PAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANELYNRGW 600
           PAK + +F VP CY    PP L +  F +F  E LFY F+SMPKDEAQLYAA+ELY RGW
Sbjct: 544 PAKSEVEFTVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQLYAADELYERGW 603

Query: 601 FYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPALP 658
           FYHKE R WF RV   EPLV+ +TYERG+Y   DPN+F+TVRK++FV+ YE++EKRP+L 
Sbjct: 604 FYHKELRVWFFRVG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVIKYELMEKRPSLL 613

[Close]

BLAST of MS020679 vs. TAIR 10
Match: AT1G07705.1 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 732.6 bits (1890), Expect = 2.7e-211
Identity = 405/597 (67.84%), Postives = 469/597 (78.56%), Query Frame = 0


Query: 1   LQSSLSGSASNLPDGTGRSFTASFSGQSGAASPVFHHTGTIQGLHNIHGSFNVQNMSGAL 60
           L SS++GS SNL DG+GR+FT+SFSGQSGAASPVFHH G+IQGLHNIHG+FNV N++G+L
Sbjct: 5   LNSSINGSTSNLSDGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSL 64

Query: 61  TSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGGINVVG 120
            SRNS++N VPS GVQQ  G++S+GRFAS+N+PVALSQ+SHGSSHGHSG+ NRG      
Sbjct: 65  GSRNSSLNGVPSAGVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRG------ 124

Query: 121 NPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGTRITSSMGNMVSGGNI 180
                                           GLGVSPILGN G+R+TSSMGNMV GG +
Sbjct: 125 --------------------------------GLGVSPILGNVGSRMTSSMGNMVGGGTM 184

Query: 181 GRSITSGGGLSLPGLASRLNISANSGSGSLTVQGQNRLMGGVLPQGSQQVISMLGSSYPS 240
           GR+++SGGGLS+P L SRLN++ NSGSG++   GQNR+MGGVLPQGS QV+SMLG+SYPS
Sbjct: 185 GRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---GQNRMMGGVLPQGSPQVLSMLGNSYPS 244

Query: 241 AGGPLSQNHVQSVNSLSSLGMLNDVNSNDNSPFDI-NDFPQLSSRPSSAGGPQGQLSSLR 300
           AGG LSQNHVQ++NSLSS+G+LND+NSND SPFDI NDFPQL+SRPSSAG  QGQL S  
Sbjct: 245 AGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGS-QGQLGSRL 304

Query: 301 KQGL--SPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQ-HENSVPMMQSQQFS 360
           KQGL  SPIVQQNQEFSIQNEDFPALP +KG +ADY MD+H  EQ HENSV MMQSQQ S
Sbjct: 305 KQGLGISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLMMQSQQLS 364

Query: 361 IGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPGNNQDLLHLHGSDIFPSSHAASY 420
           +GRS GFNLG  Y SHRPQQQQQH+ AVS+S VS           LHGSDIF SSH   Y
Sbjct: 365 MGRSGGFNLGGAYTSHRPQQQQQHAQAVSSSGVS-----------LHGSDIFSSSH-PPY 424

Query: 421 HQQSSGPPGIGLRPLNSPNSASGMSYD-QLIQQYQQHHGQSQFRLQHMSGVSQSFRDQGM 480
           H Q+ G PGIGLR +NS NS +GM YD QLIQQYQ     +Q+RLQ MS  SQ FRD G+
Sbjct: 425 HSQTGGAPGIGLRSMNSANSITGMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGL 484

Query: 481 KSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWS 540
           KSMQ+ QS+PD FGLLGLLSVI++SDPDL SLALGIDLTTLGLNLNS +NLHKTFGSPWS
Sbjct: 485 KSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWS 544

Query: 541 DEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIFFSMPKDEAQLYAANEL 592
           +EP+K DP+F+VPQCY  K PP LHQG F+K  +ETLFY+F+SMPKDEAQLYAANEL
Sbjct: 545 NEPSKVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANEL 546

The following BLAST results are available for this feature:

BLAST of MS020679 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146127.1	0.0e+00	98.63	probable NOT transcription complex subunit VIP2 isoform X2 [Momordica charantia]	[more]
XP_022146126.1	0.0e+00	97.88	probable NOT transcription complex subunit VIP2 isoform X1 [Momordica charantia]	[more]
XP_023532179.1	0.0e+00	93.77	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita pepo subsp...	[more]
XP_022947126.1	0.0e+00	93.62	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata]	[more]
XP_023007439.1	0.0e+00	93.16	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita maxima]	[more]

BLAST of MS020679 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q52JK6	1.1e-262	77.39	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthami...	[more]
Q9FPW4	5.3e-228	65.66	Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8C5L3	2.2e-32	27.05	CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 ...	[more]
Q9NZN8	1.9e-31	27.02	CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 S...	[more]
P87240	6.2e-27	38.71	General negative regulator of transcription subunit 2 OS=Schizosaccharomyces pom...	[more]

BLAST of MS020679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYQ6	0.0e+00	98.63	probable NOT transcription complex subunit VIP2 isoform X2 OS=Momordica charanti...	[more]
A0A6J1CYE2	0.0e+00	97.88	probable NOT transcription complex subunit VIP2 isoform X1 OS=Momordica charanti...	[more]
A0A6J1G5I6	0.0e+00	93.62	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1L4Y4	0.0e+00	93.16	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1G5K7	0.0e+00	93.01	probable NOT transcription complex subunit VIP2 isoform X2 OS=Cucurbita moschata...	[more]

BLAST of MS020679 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07705.2	7.6e-246	68.78	NOT2 / NOT3 / NOT5 family	[more]
AT5G59710.1	3.8e-229	65.66	VIRE2 interacting protein 2	[more]
AT1G07705.1	2.7e-211	67.84	NOT2 / NOT3 / NOT5 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007282	NOT2/NOT3/NOT5, C-terminal	PFAM	PF04153	NOT2_3_5	coord: 527..649 e-value: 7.4E-33 score: 113.4
IPR038635	CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily	GENE3D	2.30.30.1020		coord: 477..658 e-value: 1.6E-66 score: 225.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..438
None	No IPR available	PANTHER	PTHR23326:SF15	NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED	coord: 3..658
IPR040168	Not2/Not3/Not5	PANTHER	PTHR23326	CCR4 NOT-RELATED	coord: 3..658

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020679.1	MS020679.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0030015	CCR4-NOT core complex