
MS020675 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGTTTAAAAATGGGTTATGGCAGAAGAAGAATCAGAGAGCAGAGAGTCCAGTTTCTTGTGAAAGTAGCATCACCATTGAAGGGATGAGCAGAGCATGTCGGTACAGTCCAGAGGAGAAGAAGGAAAGAATTGAAAGATATAGAACAAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGGTAATTCATATTCTTCTTTATCTGCCCCTACTTGGAAATTTTATGGATTAATTCTCTAGAATAATTCACCCCCTTATTGTACCTACATATAATTTCATAGATTCTAGATGCCAACAACTATAGAACTTGTTTTCATTATTGTCATTTATAACTTTCACGTTTAATAATTCAATTATTATTAGTGCATACAGTTTAGAGGATAATATAATGTTTAGGTTGTATGTTTTGCAATTATATTCTTCATTATATGTGGGTACTTGTACTTGTGTGTTATTTCAATTTCATCCTCTTTTTGCTTTTGTCACATCTAGCATTATGAGAAGCTCCAAATCACCCCTTTTATTCGCTCTCTCTCATTTTATTTTAAAGGTTTGAAAGGTCATTTTCTGATATTTTAAAACCATCCCTAAATTGGATTCTAATGATAGGACAATCAATCCTTCCTCTAATCAACATAATTGAATCGAAATTTTGTAGGTATAACTCATTGTTTTCTTAAAGATTCTGGCTGATAATAACTGGGTTTTGTTGCAGTATGCTTGTAGGAAGTCGTTGGCCGACAGTCGACCACGGATCAGAGGAAGATTTGCAAGGTACAACGACGACGTCGTGAAGAATTATCCAGTGCAATGGAGTAGTCATGGGCGAGAGGAGGAGGAAGAAGAAGAGGCAAATGGTGGTGATAATTGGATCAAGTATTTTATGGATGCATATTCTGCGAACCTTATTCCA TTGTTTAAAAATGGGTTATGGCAGAAGAAGAATCAGAGAGCAGAGAGTCCAGTTTCTTGTGAAAGTAGCATCACCATTGAAGGGATGAGCAGAGCATGTCGGTACAGTCCAGAGGAGAAGAAGGAAAGAATTGAAAGATATAGAACAAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCGTTGGCCGACAGTCGACCACGGATCAGAGGAAGATTTGCAAGGTACAACGACGACGTCGTGAAGAATTATCCAGTGCAATGGAGTAGTCATGGGCGAGAGGAGGAGGAAGAAGAAGAGGCAAATGGTGGTGATAATTGGATCAAGTATTTTATGGATGCATATTCTGCGAACCTTATTCCA TTGTTTAAAAATGGGTTATGGCAGAAGAAGAATCAGAGAGCAGAGAGTCCAGTTTCTTGTGAAAGTAGCATCACCATTGAAGGGATGAGCAGAGCATGTCGGTACAGTCCAGAGGAGAAGAAGGAAAGAATTGAAAGATATAGAACAAAAAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCGTTGGCCGACAGTCGACCACGGATCAGAGGAAGATTTGCAAGGTACAACGACGACGTCGTGAAGAATTATCCAGTGCAATGGAGTAGTCATGGGCGAGAGGAGGAGGAAGAAGAAGAGGCAAATGGTGGTGATAATTGGATCAAGTATTTTATGGATGCATATTCTGCGAACCTTATTCCA LFKNGLWQKKNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDDVVKNYPVQWSSHGREEEEEEEANGGDNWIKYFMDAYSANLIP Homology
BLAST of MS020675 vs. NCBI nr
Match: XP_022146112.1 (uncharacterized protein LOC111015406 [Momordica charantia]) HSP 1 Score: 237.7 bits (605), Expect = 5.7e-59 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of MS020675 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 4.7e-53 Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of MS020675 vs. NCBI nr
Match: XP_023532290.1 (two-component response regulator-like PRR1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532291.1 two-component response regulator-like PRR1 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51 Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of MS020675 vs. NCBI nr
Match: KAG6570739.1 (Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211.5 bits (537), Expect = 4.4e-51 Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of MS020675 vs. NCBI nr
Match: KAG7035439.1 (Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.1 bits (536), Expect = 5.7e-51 Identity = 108/127 (85.04%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of MS020675 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.9e-07 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of MS020675 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MS020675 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of MS020675 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of MS020675 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MS020675 vs. ExPASy TrEMBL
Match: A0A6J1CYP0 (uncharacterized protein LOC111015406 OS=Momordica charantia OX=3673 GN=LOC111015406 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.8e-59 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of MS020675 vs. ExPASy TrEMBL
Match: A0A6J1JHZ7 (uncharacterized protein LOC111484524 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484524 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.8e-51 Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of MS020675 vs. ExPASy TrEMBL
Match: A0A6J1FXW4 (uncharacterized protein LOC111448769 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448769 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51 Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of MS020675 vs. ExPASy TrEMBL
Match: A0A6J1L4M8 (two-component response regulator-like PRR1 OS=Cucurbita maxima OX=3661 GN=LOC111499858 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50 Identity = 107/126 (84.92%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of MS020675 vs. ExPASy TrEMBL
Match: A0A6J1G5H7 (zinc finger protein CONSTANS-LIKE 14-like OS=Cucurbita moschata OX=3662 GN=LOC111450985 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50 Identity = 106/125 (84.80%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of MS020675 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein ) HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23 Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of MS020675 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of MS020675 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein ) HSP 1 Score: 85.9 bits (211), Expect = 2.6e-17 Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of MS020675 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 ) HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of MS020675 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein ) HSP 1 Score: 84.0 bits (206), Expect = 9.8e-17 Identity = 43/77 (55.84%), Postives = 61/77 (79.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|