MS020667 (gene) Bitter gourd (TR) v1

Overview


Name	MS020667
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	glutamic acid-rich protein-like
Location	scaffold375: 2053002 .. 2054123 (+)
RNA-Seq Expression	MS020667
Synteny	MS020667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCGTCACCGGAAGGGTCATCTCTTCGAAGCCAATCTCTCTCTCCAAGGCGGCGTCCACTCTCTCCTCGTTCCTGTCCACCGATAATGGCGCTTCTCCAGCATTCTGTGCGTACCTGAGACGCGCCTCCGCCTCTTTCAATGAGTTGAAGCAGCTACACAAGGAGCTGAAGTCTTCGCGGTCCGATCGGAAGCACCGGCATCACAGATCTGAGGTTTTTAGTGGCTTAGAGGTTGCCGTGGATGAACCATATCGGAGTGAGGCGAGTCATGGGATCAATCATCGGATCGAAGGCGGCGAGAAGAAGAACTCTTCCGTATCTGAGAGCAAAAGCGGGAAGAAGCGGCGGGATAGTAGGGACCGAACTGAGGATAAGCCGGCCCTCAGTGTCCAATCTGATCGAGAATCAGGCCGTGAGTATCGAGAGGACGGGCGGGCGGATGGAAAGAGGAACGGGAATGGTGGTTTTGAGGGTGTAATAGGTGAAGATGGAAAGAGAAGGAGCGACGAATTGAAAACAGAAGTTGAACGTAAGCCTAGCCGGAGAGTTGAGATGGATGTGGAATCAAGCGATGGAGTTAAAAGCAGTGTAGCAGTTGAGAGTAGGAGAAAAAAGCACAAGAAAAAGAGCGAGGAAGAACATGGTAAGACTGGTGATGATGAACGTGATGCTGGAGCCAGACAAAGCTATAGCAAATCACGAATTAGTGATAATAACGGCGAGATTGAAGCTGCTGCGGGGGATCTCGTTGAGAACAATGTAGCAAGGGGAAAAGATAGGAAGAAGGACAAGAAGAATGTGGGTGATGAGAGGGATAAAGTAAGGAGTGAAGGTCGGAGAAAAAGAGACGTCGAGGCAGAAGAGACCGCGGATAAGAACAATGGTGATCGGAAGGACCTTGTGGAGCTGCCGACCAAGAAGAATAAGAAGAAGAGGGAAGAAGATGCTGGCGATCTTCAAAATAACAGTGGAGGCGCTGTAGAGAGAAAGGGAATGCCAGTTTTGGACAGTAAAGAATTGAAAAGAAAAGAAAAGAAAAAGAGGAAGAATCGAGACTTAGAACAAGGGGGTGACGATGGTTCAGAGGAGCAGCAGGGTACAAAGAGAAGGAAAGGA

mRNA sequence

ATGAAGACCGTCACCGGAAGGGTCATCTCTTCGAAGCCAATCTCTCTCTCCAAGGCGGCGTCCACTCTCTCCTCGTTCCTGTCCACCGATAATGGCGCTTCTCCAGCATTCTGTGCGTACCTGAGACGCGCCTCCGCCTCTTTCAATGAGTTGAAGCAGCTACACAAGGAGCTGAAGTCTTCGCGGTCCGATCGGAAGCACCGGCATCACAGATCTGAGGTTTTTAGTGGCTTAGAGGTTGCCGTGGATGAACCATATCGGAGTGAGGCGAGTCATGGGATCAATCATCGGATCGAAGGCGGCGAGAAGAAGAACTCTTCCGTATCTGAGAGCAAAAGCGGGAAGAAGCGGCGGGATAGTAGGGACCGAACTGAGGATAAGCCGGCCCTCAGTGTCCAATCTGATCGAGAATCAGGCCGTGAGTATCGAGAGGACGGGCGGGCGGATGGAAAGAGGAACGGGAATGGTGGTTTTGAGGGTGTAATAGGTGAAGATGGAAAGAGAAGGAGCGACGAATTGAAAACAGAAGTTGAACGTAAGCCTAGCCGGAGAGTTGAGATGGATGTGGAATCAAGCGATGGAGTTAAAAGCAGTGTAGCAGTTGAGAGTAGGAGAAAAAAGCACAAGAAAAAGAGCGAGGAAGAACATGGTAAGACTGGTGATGATGAACGTGATGCTGGAGCCAGACAAAGCTATAGCAAATCACGAATTAGTGATAATAACGGCGAGATTGAAGCTGCTGCGGGGGATCTCGTTGAGAACAATGTAGCAAGGGGAAAAGATAGGAAGAAGGACAAGAAGAATGTGGGTGATGAGAGGGATAAAGTAAGGAGTGAAGGTCGGAGAAAAAGAGACGTCGAGGCAGAAGAGACCGCGGATAAGAACAATGGTGATCGGAAGGACCTTGTGGAGCTGCCGACCAAGAAGAATAAGAAGAAGAGGGAAGAAGATGCTGGCGATCTTCAAAATAACAGTGGAGGCGCTGTAGAGAGAAAGGGAATGCCAGTTTTGGACAGTAAAGAATTGAAAAGAAAAGAAAAGAAAAAGAGGAAGAATCGAGACTTAGAACAAGGGGGTGACGATGGTTCAGAGGAGCAGCAGGGTACAAAGAGAAGGAAAGGA

Coding sequence (CDS)

ATGAAGACCGTCACCGGAAGGGTCATCTCTTCGAAGCCAATCTCTCTCTCCAAGGCGGCGTCCACTCTCTCCTCGTTCCTGTCCACCGATAATGGCGCTTCTCCAGCATTCTGTGCGTACCTGAGACGCGCCTCCGCCTCTTTCAATGAGTTGAAGCAGCTACACAAGGAGCTGAAGTCTTCGCGGTCCGATCGGAAGCACCGGCATCACAGATCTGAGGTTTTTAGTGGCTTAGAGGTTGCCGTGGATGAACCATATCGGAGTGAGGCGAGTCATGGGATCAATCATCGGATCGAAGGCGGCGAGAAGAAGAACTCTTCCGTATCTGAGAGCAAAAGCGGGAAGAAGCGGCGGGATAGTAGGGACCGAACTGAGGATAAGCCGGCCCTCAGTGTCCAATCTGATCGAGAATCAGGCCGTGAGTATCGAGAGGACGGGCGGGCGGATGGAAAGAGGAACGGGAATGGTGGTTTTGAGGGTGTAATAGGTGAAGATGGAAAGAGAAGGAGCGACGAATTGAAAACAGAAGTTGAACGTAAGCCTAGCCGGAGAGTTGAGATGGATGTGGAATCAAGCGATGGAGTTAAAAGCAGTGTAGCAGTTGAGAGTAGGAGAAAAAAGCACAAGAAAAAGAGCGAGGAAGAACATGGTAAGACTGGTGATGATGAACGTGATGCTGGAGCCAGACAAAGCTATAGCAAATCACGAATTAGTGATAATAACGGCGAGATTGAAGCTGCTGCGGGGGATCTCGTTGAGAACAATGTAGCAAGGGGAAAAGATAGGAAGAAGGACAAGAAGAATGTGGGTGATGAGAGGGATAAAGTAAGGAGTGAAGGTCGGAGAAAAAGAGACGTCGAGGCAGAAGAGACCGCGGATAAGAACAATGGTGATCGGAAGGACCTTGTGGAGCTGCCGACCAAGAAGAATAAGAAGAAGAGGGAAGAAGATGCTGGCGATCTTCAAAATAACAGTGGAGGCGCTGTAGAGAGAAAGGGAATGCCAGTTTTGGACAGTAAAGAATTGAAAAGAAAAGAAAAGAAAAAGAGGAAGAATCGAGACTTAGAACAAGGGGGTGACGATGGTTCAGAGGAGCAGCAGGGTACAAAGAGAAGGAAAGGA

Protein sequence

MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKSSRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDSRDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERKPSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDNNGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRKRDVEAEETADKNNGDRKDLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLEQGGDDGSEEQQGTKRRKG

Homology

[Close]

BLAST of MS020667 vs. NCBI nr
Match: XP_022146269.1 (nuclear speckle splicing regulatory protein 1 [Momordica charantia])

HSP 1 Score: 652.1 bits (1681), Expect = 2.8e-183
Identity = 366/374 (97.86%), Postives = 369/374 (98.66%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHHRSEVFSGLEVAVDE YRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS
Sbjct: 61  SRSDRKHRHHRSEVFSGLEVAVDETYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
           RDRTEDKPALSVQSDRESGREYRED RADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK
Sbjct: 121 RDRTEDKPALSVQSDRESGREYREDARADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN
Sbjct: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRKRDVEAEETADKNNGDRK 300
           NGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRR+RDVEAEETADKNNGD K
Sbjct: 241 NGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRRRDVEAEETADKNNGDWK 300

Query: 301 DLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLEQGGD 360
           DLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSK+LKRKEKKKRKNRDLE+GG 
Sbjct: 301 DLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKKLKRKEKKKRKNRDLERGGG 360

Query: 361 DGSEEQQGTKRRKG 375
            GSEEQQGTKRRKG
Sbjct: 361 GGSEEQQGTKRRKG 374

[Close]

BLAST of MS020667 vs. NCBI nr
Match: KAG7010591.1 (hypothetical protein SDJN02_27385, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 7.7e-96
Identity = 233/377 (61.80%), Postives = 279/377 (74.01%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG ++SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHH SE  +  E + D P          H IE GEKKN     +K G+     
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRDNP----------HWIEDGEKKNPLYLRAKVGR----- 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
                 KP+ +VQS  E G+    DG+ + +  GNG FE   GE  KR+ ++LKTE+E K
Sbjct: 121 ----SGKPSFNVQS--EDGK----DGKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           P+R+VEMDVESSD  KS VAVE++RKKHKKKSE+ H K  DDER+ GAR+SYSKSRISDN
Sbjct: 181 PNRKVEMDVESSDKDKSVVAVETKRKKHKKKSEDRHAKIEDDERENGARRSYSKSRISDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NGEIE A+G  VENN+A GKDRKK  DKK++ D++D+V+SEG+R+RD E E++ +K+N D
Sbjct: 241 NGEIE-ASGKFVENNIASGKDRKKHEDKKSLVDDKDQVKSEGQRRRDAEEEKSTNKDNDD 300

Query: 301 RKDLVELPTKKNKKK-REEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLEQ 360
             +  +   KK KKK REE+  D QNNSGGA+ ++ +PV D KELKRKEKKKRKNR LE+
Sbjct: 301 GAESTKKKKKKKKKKNREEEDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEE 351

Query: 361 GGDDGSEEQQGTKRRKG 375
           GGDDGSEEQQ TKRRKG
Sbjct: 361 GGDDGSEEQQRTKRRKG 351

[Close]

BLAST of MS020667 vs. NCBI nr
Match: XP_023511985.1 (DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511987.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511988.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 1.9e-94
Identity = 233/377 (61.80%), Postives = 277/377 (73.47%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG ++SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHH SE       A ++P   EA     H IE GEKKN      K G+     
Sbjct: 61  SRSDRKHRHHGSE-------ASNDP---EAPRVNPHWIEDGEKKNLEYLREKDGR----- 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
                 KP+L+VQS      E  +DG+ + K  GNG FE   GE  KR+ ++LKTE+E K
Sbjct: 121 ----SGKPSLNVQS------EDGQDGKTETKSGGNGDFEDASGEYRKRKVEDLKTEIEDK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           P+R+VEMDVESSD  KS VAVE + KKHKKKSE+ H K  DDE +AGAR+SYSKSR SDN
Sbjct: 181 PNRKVEMDVESSDKDKSVVAVEKKGKKHKKKSEDRHAKIEDDEHEAGARRSYSKSRNSDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NGEIE A+G  VEN++A GKDRKK  DKK++GD++D+V+SEG+R+RD E E++ +K+N D
Sbjct: 241 NGEIE-ASGKFVENSIASGKDRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDD 300

Query: 301 RKDLVELPTKKNKKK-REEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLEQ 360
             +  +   KK KKK REE+  D QNNSGGA+ ++ +PV D KELKRKEKKKRKNR LE+
Sbjct: 301 GTESTKKKRKKKKKKNREEEDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEE 351

Query: 361 GGDDGSEEQQGTKRRKG 375
           GGDDGSEEQQ TKRRKG
Sbjct: 361 GGDDGSEEQQRTKRRKG 351

[Close]

BLAST of MS020667 vs. NCBI nr
Match: XP_038902882.1 (probable xyloglucan galactosyltransferase GT11 [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 7.2e-94
Identity = 236/381 (61.94%), Postives = 283/381 (74.28%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG V+SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSVDNGASQALCAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRS RKH HH SEV + LE A+D  Y          R+E GEKK SSVSE    KKR +S
Sbjct: 61  SRSVRKHLHHGSEVSNELEAALDNSY----------RVEDGEKKKSSVSER---KKRPES 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
           R    +KP+  VQS+ E         +   +  GNG  E V+GEDGKR+  ELK E+E K
Sbjct: 121 R----NKPSARVQSEDE------RIWKTTMENGGNGKLEDVLGEDGKRKGGELKIEIEDK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           P+R+VEMDVESSD  K  VAVE +RKKHKKK+E++HG   DDERD+GAR S++KS+ SDN
Sbjct: 181 PNRKVEMDVESSDRDKGVVAVEKKRKKHKKKNEDKHGNIEDDERDSGARLSHNKSQNSDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NG IE A+G+ VENNVAR K  KK  DKK++GDE+D+V++E +R+RD+E E+  +K+N D
Sbjct: 241 NGNIE-ASGEFVENNVAREKVEKKHEDKKSLGDEKDQVKTEVQRRRDIEEEKGINKDNDD 300

Query: 301 RKDLVELPT----KKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRD 360
             D+V+L T    KK KKKREED  D QNNSGGA+    MPV +SKELKRK++KKRKNR+
Sbjct: 301 GTDIVDLSTKKKKKKKKKKREEDVDDFQNNSGGAMVNDEMPVSNSKELKRKDRKKRKNRE 357

Query: 361 L-EQGGDDGSEEQQGTKRRKG 375
           L E+GGDD SEE+QGTKRRKG
Sbjct: 361 LGEEGGDDVSEEKQGTKRRKG 357

[Close]

BLAST of MS020667 vs. NCBI nr
Match: XP_022986894.1 (cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxima] >XP_022986896.1 cylicin-1-like [Cucurbita maxima])

HSP 1 Score: 354.8 bits (909), Expect = 9.4e-94
Identity = 232/378 (61.38%), Postives = 274/378 (72.49%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG ++SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHH SE  +  E A D P            IE GEKKN     +K GK     
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNP----------QWIEDGEKKNPLYLRAKDGK----- 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
                 K +L+VQS         EDG+A+ +  GNG FE   GE  KR+ ++LKTE+E K
Sbjct: 121 ----SGKTSLNVQS---------EDGKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           P+R+VEMDVESSD  KS VAVE + KKH+KKSE+ + K  DDE  AGAR+S SKSR SDN
Sbjct: 181 PNRKVEMDVESSDKDKSVVAVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NGEIEA+A   VENN+A GKDRKK  DKK++GD++D+V+SEG R+RD E E++ +K+N D
Sbjct: 241 NGEIEASA-KFVENNIASGKDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDD 300

Query: 301 RKDLVELPTKKNKKK--REEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLE 360
             +  +   KK KKK  REE+  D QNNSGGA+ ++ +PVLD KELKRKEKKKRKNRDLE
Sbjct: 301 GTESSKKKKKKKKKKKNREEEDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLE 349

Query: 361 QGGDDGSEEQQGTKRRKG 375
           +GGDDGSEEQQ TKRRKG
Sbjct: 361 EGGDDGSEEQQRTKRRKG 349

[Close]

BLAST of MS020667 vs. ExPASy TrEMBL
Match: A0A6J1CXN0 (nuclear speckle splicing regulatory protein 1 OS=Momordica charantia OX=3673 GN=LOC111015519 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.4e-183
Identity = 366/374 (97.86%), Postives = 369/374 (98.66%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHHRSEVFSGLEVAVDE YRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS
Sbjct: 61  SRSDRKHRHHRSEVFSGLEVAVDETYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
           RDRTEDKPALSVQSDRESGREYRED RADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK
Sbjct: 121 RDRTEDKPALSVQSDRESGREYREDARADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN
Sbjct: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRKRDVEAEETADKNNGDRK 300
           NGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRR+RDVEAEETADKNNGD K
Sbjct: 241 NGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRRRDVEAEETADKNNGDWK 300

Query: 301 DLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLEQGGD 360
           DLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSK+LKRKEKKKRKNRDLE+GG 
Sbjct: 301 DLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKKLKRKEKKKRKNRDLERGGG 360

Query: 361 DGSEEQQGTKRRKG 375
            GSEEQQGTKRRKG
Sbjct: 361 GGSEEQQGTKRRKG 374

[Close]

BLAST of MS020667 vs. ExPASy TrEMBL
Match: A0A6J1JCJ7 (cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 4.5e-94
Identity = 232/378 (61.38%), Postives = 274/378 (72.49%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG ++SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHH SE  +  E A D P            IE GEKKN     +K GK     
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNP----------QWIEDGEKKNPLYLRAKDGK----- 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
                 K +L+VQS         EDG+A+ +  GNG FE   GE  KR+ ++LKTE+E K
Sbjct: 121 ----SGKTSLNVQS---------EDGKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           P+R+VEMDVESSD  KS VAVE + KKH+KKSE+ + K  DDE  AGAR+S SKSR SDN
Sbjct: 181 PNRKVEMDVESSDKDKSVVAVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NGEIEA+A   VENN+A GKDRKK  DKK++GD++D+V+SEG R+RD E E++ +K+N D
Sbjct: 241 NGEIEASA-KFVENNIASGKDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDD 300

Query: 301 RKDLVELPTKKNKKK--REEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLE 360
             +  +   KK KKK  REE+  D QNNSGGA+ ++ +PVLD KELKRKEKKKRKNRDLE
Sbjct: 301 GTESSKKKKKKKKKKKNREEEDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLE 349

Query: 361 QGGDDGSEEQQGTKRRKG 375
           +GGDDGSEEQQ TKRRKG
Sbjct: 361 EGGDDGSEEQQRTKRRKG 349

[Close]

BLAST of MS020667 vs. ExPASy TrEMBL
Match: A0A6J1FSX8 (glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 5.9e-94
Identity = 233/377 (61.80%), Postives = 278/377 (73.74%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG ++SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDRKHRHH SE       A ++P   EAS G  H IE  EKKN     +K G+     
Sbjct: 61  SRSDRKHRHHGSE-------ASNDP---EASRGNPHWIEDDEKKNPLYLRAKDGR----- 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
                 KP+ +VQS  E G+    DG+ + +  G+G FE   GE  KR+  +LKTE+E K
Sbjct: 121 ----SGKPSFNVQS--EDGK----DGKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           P+R+VEMDVESSD  KS VAVE + KKHKKKSE+ H K  DDER+ GAR+SYSKSR SDN
Sbjct: 181 PNRKVEMDVESSDKDKSVVAVEKKGKKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NGEIE A+G  VENN+A GKDRKK  DKK++GD++D+V+SEG+R+RD E E++ +K+N D
Sbjct: 241 NGEIE-ASGKFVENNIASGKDRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDD 300

Query: 301 RKDLVELPTKKNKKK-REEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDLEQ 360
             +  +   KK KKK REE+  D QNNSGGA+ ++ +PV D KELKRKEKKKRKNR LE+
Sbjct: 301 GTESTKKKKKKKKKKNREEEDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEE 351

Query: 361 GGDDGSEEQQGTKRRKG 375
           GGDDGSEEQQ TKRRKG
Sbjct: 361 GGDDGSEEQQRTKRRKG 351

[Close]

BLAST of MS020667 vs. ExPASy TrEMBL
Match: A0A6J1G5Q5 (DEAD-box ATP-dependent RNA helicase 42-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451081 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 8.6e-93
Identity = 235/381 (61.68%), Postives = 265/381 (69.55%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKT+TG V+SSKPISLSKAASTLSSFLS DNGAS A CAYLRRASASFNELKQLHK+LKS
Sbjct: 1   MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           SRSDR  RHH  EV SGLE AVD           +HRIE GE+  SSV+ESKSGKKRR+S
Sbjct: 61  SRSDRNPRHHGFEVSSGLEAAVDS----------SHRIENGERIKSSVNESKSGKKRRES 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVERK 180
           RDR E++                +DG+      GNG FE V+GEDGKRRSDELKTE+E K
Sbjct: 121 RDRNENE----------------QDGKTAMASGGNGDFEDVVGEDGKRRSDELKTEIEEK 180

Query: 181 PSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISDN 240
           PSRRVE+DV+SSD  +S V +E ++KKHKKKS     K G+DERDA   QSY KS+ S N
Sbjct: 181 PSRRVEVDVKSSDRDESVVGIEKKKKKHKKKS-----KDGEDERDAEVGQSYGKSQTSAN 240

Query: 241 NGEIEAAAGDLVENNVARGKDRK--KDKKNVGDERDKVRSEGRRKRDVEAEETADKNNGD 300
           NGE EA   D +ENNV RGKDRK  KDK N+GDE+       R K+D          N D
Sbjct: 241 NGETEATE-DFIENNVGRGKDRKKHKDKNNLGDEK-------RTKKD----------NDD 300

Query: 301 RKDLVELPT------KKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKN 360
              LVEL T      KK KK REED  DLQNN GGA+E++ MPV D +ELKRKE KKRKN
Sbjct: 301 ETGLVELSTKDKKKKKKKKKNREEDDDDLQNNGGGAIEKEKMPVSDCQELKRKESKKRKN 332

Query: 361 RDLEQGGDDGSEEQQGTKRRK 374
            DLE+G DDGSEEQQGTKRRK
Sbjct: 361 GDLEEGVDDGSEEQQGTKRRK 332

[Close]

BLAST of MS020667 vs. ExPASy TrEMBL
Match: A0A5A7SW64 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00720 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85
Identity = 224/379 (59.10%), Postives = 271/379 (71.50%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTG V+SSKPIS+SKAASTLSSFLS DNGAS A CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
           S S RKH HH S+V +  E A+D  Y          R+E G+KKNSSVSE    KKR DS
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEY----------RVEDGDKKNSSVSEK---KKRPDS 120

Query: 121 RDRTEDKPALSVQSDRE-SGREYREDGRADGKRNGNGGFEGVIGEDGKRRSDELKTEVER 180
           + RT DK +L VQSD E SG+   E+G       GNG  E V    GKR+   LK E+E 
Sbjct: 121 KYRTTDKTSLRVQSDDEQSGKTAMENG-------GNGNLEDV---SGKRKGGGLKIEIED 180

Query: 181 KPSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSRISD 240
           KPS +VEMDVESSD     VAVE +RKKHKKKSE+ HG   DDER++GAR  + KS+ +D
Sbjct: 181 KPSGKVEMDVESSD----VVAVEKKRKKHKKKSEDRHGDIEDDERESGARLKHGKSQNTD 240

Query: 241 NNGEIEAAAGDLVENNVARGKDRKK--DKKNVGDERDKVRSEGRRKRDVEAEETADKNNG 300
           NN +   A+G+ VENNVA+GK RKK  DK+++GD +D+V+SE +R+ D++ E + D +NG
Sbjct: 241 NNCDNAEASGEFVENNVAKGKSRKKLEDKRSLGDVKDQVKSEDQRRGDIKEERSTDNDNG 300

Query: 301 DRKDLVELPTKKNKK-KREEDAGDLQNNSGGAVERKGMPVLDSKELKRKEKKKRKNRDL- 360
           +  DLV+L TKK KK K+ E+  D Q NSGGA+ ++ +PVLDSKELKRKEKKK KNR+L 
Sbjct: 301 NGTDLVDLSTKKKKKRKQREEDDDFQKNSGGAMVKEEVPVLDSKELKRKEKKKSKNRELG 352

Query: 361 EQGGDDGSEEQQGTKRRKG 375
           E+G DDGSEEQ   KRRKG
Sbjct: 361 EEGHDDGSEEQHSRKRRKG 352

[Close]

BLAST of MS020667 vs. TAIR 10
Match: AT1G75335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 7.8e-14
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1  MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
          MKTVTGRV S+KPISLSKAA+ LS F+S++NGAS    AYLRRAS +F ELK +H+E+KS
Sbjct: 1  MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREIKS 60

Query: 61 SR----SDRKHRHHR 72
                S +K + HR
Sbjct: 61 KETKLSSKKKRKSHR 75

[Close]

BLAST of MS020667 vs. TAIR 10
Match: AT5G60030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-12
Identity = 114/371 (30.73%), Postives = 170/371 (45.82%), Query Frame = 0


Query: 1   MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
           MKTVTGRV+S++PISLSKAA  LS F S+DNGAS    AYLRRASA+F ELK  H+E+KS
Sbjct: 1   MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKS 60

Query: 61  SRSDRKHRHHRSEVFSGLEVAVDEPYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
                                                    E K SS  E+KS       
Sbjct: 61  K----------------------------------------ETKPSSDRETKS------- 120

Query: 121 RDRTEDKPALSVQSDRESGREYREDGRADGKRNGNG-GFEGVIGEDGKRRSDELKTEVER 180
              TE K +   +S+R    E+  DGR    RN      E V G    R  DE K    +
Sbjct: 121 ---TETKQSSDAKSERNVIDEF--DGRKIRYRNSEAVSVESVYG----RERDEKKM---K 180

Query: 181 KPSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGD-----------DERDAGA 240
           K      +D + ++ +++    E RR++ K+K ++++ K  D           DE+ +  
Sbjct: 181 KSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSAD 240

Query: 241 RQSYSKSRISDNNGEIEAAAGDLVEN--NVARGKDRKKDK-KNVGDERDKVRSEGRRKRD 300
           R+   K +   NN E      + +E+    A  K++KK+K ++V DE++K + E      
Sbjct: 241 RKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKEKEKLED----- 291

Query: 301 VEAEETADKNNGDRKDLVELPTKKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKELKRK 357
                  ++ +G+RK       K+ KKKR+ D   +        +RK    + S+E  RK
Sbjct: 301 -------EQRSGERK-------KEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSEE--RK 291

The following BLAST results are available for this feature:

BLAST of MS020667 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146269.1	2.8e-183	97.86	nuclear speckle splicing regulatory protein 1 [Momordica charantia]	[more]
KAG7010591.1	7.7e-96	61.80	hypothetical protein SDJN02_27385, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023511985.1	1.9e-94	61.80	DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topois...	[more]
XP_038902882.1	7.2e-94	61.94	probable xyloglucan galactosyltransferase GT11 [Benincasa hispida]	[more]
XP_022986894.1	9.4e-94	61.38	cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxi...	[more]

BLAST of MS020667 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS020667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXN0	1.4e-183	97.86	nuclear speckle splicing regulatory protein 1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1JCJ7	4.5e-94	61.38	cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1	[more]
A0A6J1FSX8	5.9e-94	61.80	glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE...	[more]
A0A6J1G5Q5	8.6e-93	61.68	DEAD-box ATP-dependent RNA helicase 42-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A5A7SW64	1.0e-85	59.10	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of MS020667 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75335.1	7.8e-14	60.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G60030.1	1.1e-12	30.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..152
None	No IPR available	PANTHER	PTHR48227	DNA TOPOISOMERASE 1-LIKE	coord: 1..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020667.1	MS020667.1	mRNA