MS020665 (gene) Bitter gourd (TR) v1

Overview
NameMS020665
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold375: 2033509 .. 2034291 (+)
RNA-Seq ExpressionMS020665
SyntenyMS020665
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGACGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTCCCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGGTAATTAAATTTCTCCAAGAATTTCAAGAATCCGTTTCTGAATTGTTAATCGAATCTTTTATCTCCTGGAAATTGGTTTCTGTTTCTTGCGAATGTGATTTAGTACATCTCTGATCTCTAAATGAATGAGCTAGGTATAGTTTCTTTTACTTTCCAGTAATTGATATAGTCTTTATCAAGAATTTGTCGAACCATTGCTTGAATTCTACTCTTCTTCCCTTCTCTTTTTCGTTACTTCATCAATTCGTGATTTCTTGCTCTCTGTTCGGCGAATTCAGAAATCAATTCGCTAATTATTCGTGTTTGCGTGTATTCTTTTTTCTTTAAACACAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAGCCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACAGAGCATACCA

mRNA sequence

ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGACGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTCCCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAGCCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACAGAGCATACCA

Coding sequence (CDS)

ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGACGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTCCCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAGCCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACAGAGCATACCA

Protein sequence

MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP
Homology
BLAST of MS020665 vs. NCBI nr
Match: XP_022146089.1 (uncharacterized protein LOC111015385 [Momordica charantia])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0

Query: 1   MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60
           MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV
Sbjct: 1   MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60

Query: 61  SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120
           SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE
Sbjct: 61  SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120

Query: 121 LAVLGAAGMQIASSPLNLTSRGARDLQSIP 151
           LAVLGAAGMQIASSPLNLT RGARDLQSIP
Sbjct: 121 LAVLGAAGMQIASSPLNLTGRGARDLQSIP 150

BLAST of MS020665 vs. NCBI nr
Match: XP_038902298.1 (uncharacterized protein LOC120088933 [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 4.0e-43
Identity = 101/155 (65.16%), Postives = 115/155 (74.19%), Query Frame = 0

Query: 1   MQQRSLSLFRATDDH-----CIIIGPTQEPQGRRSPSRRSTDGLD--GGGLLPVSDPRSG 60
           MQQR+LS FRAT+DH      I   PTQEP+GRRSP  RS+  +D    GLLP+SDPR  
Sbjct: 1   MQQRALSSFRATNDHDHCNIMIFSTPTQEPRGRRSPPSRSSILMDDSNAGLLPISDPRFS 60

Query: 61  FRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPY-EFPEPP 120
            + RDH S YR AERWIHLIPL L L++FILWW SYPVN+ IKD  I+ VY   +FPE P
Sbjct: 61  TKKRDHNSRYRFAERWIHLIPLILLLILFILWWSSYPVNMVIKDGAISAVYTNDQFPEAP 120

Query: 121 KNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQ 148
           K YIDHVELAVLG AGMQIASSPLN+TS G RDL+
Sbjct: 121 K-YIDHVELAVLGDAGMQIASSPLNVTSIGDRDLR 154

BLAST of MS020665 vs. NCBI nr
Match: XP_022986953.1 (uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 3.3e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0

Query: 1   MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
           MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R 
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60

Query: 61  RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
           RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD  I  VY  EFPE PK YI
Sbjct: 61  RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
           DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148

BLAST of MS020665 vs. NCBI nr
Match: XP_022986954.1 (uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 3.3e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0

Query: 1   MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
           MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R 
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60

Query: 61  RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
           RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD  I  VY  EFPE PK YI
Sbjct: 61  RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
           DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148

BLAST of MS020665 vs. NCBI nr
Match: KAG7010594.1 (hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.4 bits (459), Expect = 5.7e-42
Identity = 104/152 (68.42%), Postives = 111/152 (73.03%), Query Frame = 0

Query: 1   MQQRS--LSLFRA-TDDHCII-IGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
           MQQRS   S FRA TDDHC I   P QEPQGR SP  RS D    G +LPVSDP    R 
Sbjct: 1   MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDD-SSGSILPVSDP--SCRK 60

Query: 61  RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
           RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD  I  VY  EFPE PK YI
Sbjct: 61  RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
           DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGGAGMQIASSPLNLTSVGARDLRT 148

BLAST of MS020665 vs. ExPASy TrEMBL
Match: A0A6J1CX54 (uncharacterized protein LOC111015385 OS=Momordica charantia OX=3673 GN=LOC111015385 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.2e-81
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0

Query: 1   MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60
           MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV
Sbjct: 1   MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60

Query: 61  SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120
           SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE
Sbjct: 61  SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120

Query: 121 LAVLGAAGMQIASSPLNLTSRGARDLQSIP 151
           LAVLGAAGMQIASSPLNLT RGARDLQSIP
Sbjct: 121 LAVLGAAGMQIASSPLNLTGRGARDLQSIP 150

BLAST of MS020665 vs. ExPASy TrEMBL
Match: A0A6J1JI18 (uncharacterized protein LOC111484535 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484535 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0

Query: 1   MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
           MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R 
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60

Query: 61  RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
           RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD  I  VY  EFPE PK YI
Sbjct: 61  RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
           DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148

BLAST of MS020665 vs. ExPASy TrEMBL
Match: A0A6J1JHI4 (uncharacterized protein LOC111484535 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484535 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0

Query: 1   MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
           MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G  LPVSDP    R 
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60

Query: 61  RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
           RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD  I  VY  EFPE PK YI
Sbjct: 61  RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
           DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148

BLAST of MS020665 vs. ExPASy TrEMBL
Match: A0A6J1FUE4 (uncharacterized protein LOC111448884 OS=Cucurbita moschata OX=3662 GN=LOC111448884 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 103/150 (68.67%), Postives = 108/150 (72.00%), Query Frame = 0

Query: 1   MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
           MQQRS   S FRA TDDHC II  P QEPQGR SP  RS D    G +LPVSDP    R 
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSILPVSDP--SCRK 60

Query: 61  RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
           RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD  I  VY  EFPE PK YI
Sbjct: 61  RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDL 147
           DHVELA+L  AGMQIASSPLNLTS G RDL
Sbjct: 121 DHVELAILRGAGMQIASSPLNLTSVGTRDL 146

BLAST of MS020665 vs. ExPASy TrEMBL
Match: A0A5D3CTN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00940 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29
Identity = 87/154 (56.49%), Postives = 97/154 (62.99%), Query Frame = 0

Query: 1   MQQRSLSLFR-ATDDHCIIIGPT--QEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNR 60
           MQQR+   FR  TD+HC ++  T  +EPQG R  S    D    G LLP+SDPR   R R
Sbjct: 1   MQQRA---FRPTTDNHCSVMISTTSREPQGIR--SSMEDDFTAAGDLLPISDPRFSIRKR 60

Query: 61  DHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYE-FPEPPKNYI 120
           D  S YR    WIHLIPL L L++FILWW SYPV   IKD  I   Y  E  PE PK Y+
Sbjct: 61  DRNSRYRFHVHWIHLIPLILLLILFILWWSSYPV---IKDGGIRADYEKERLPEVPK-YV 120

Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP 151
           DH ELAVLG AGM IASSPLNLTS G RD + IP
Sbjct: 121 DHTELAVLGDAGMHIASSPLNLTSVGDRDSRIIP 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146089.11.1e-8099.33uncharacterized protein LOC111015385 [Momordica charantia][more]
XP_038902298.14.0e-4365.16uncharacterized protein LOC120088933 [Benincasa hispida][more]
XP_022986953.13.3e-4269.08uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima][more]
XP_022986954.13.3e-4269.08uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima][more]
KAG7010594.15.7e-4268.42hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CX545.2e-8199.33uncharacterized protein LOC111015385 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1JI181.6e-4269.08uncharacterized protein LOC111484535 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JHI41.6e-4269.08uncharacterized protein LOC111484535 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FUE41.8e-4168.67uncharacterized protein LOC111448884 OS=Cucurbita moschata OX=3662 GN=LOC1114488... [more]
A0A5D3CTN82.7e-2956.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..51
NoneNo IPR availablePANTHERPTHR34189:SF7SERINE/THREONINE-KINASE RLCKVII PROTEINcoord: 1..146
NoneNo IPR availablePANTHERPTHR34189TRANSMEMBRANE PROTEINcoord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020665.1MS020665.1mRNA