Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGACGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTCCCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGGTAATTAAATTTCTCCAAGAATTTCAAGAATCCGTTTCTGAATTGTTAATCGAATCTTTTATCTCCTGGAAATTGGTTTCTGTTTCTTGCGAATGTGATTTAGTACATCTCTGATCTCTAAATGAATGAGCTAGGTATAGTTTCTTTTACTTTCCAGTAATTGATATAGTCTTTATCAAGAATTTGTCGAACCATTGCTTGAATTCTACTCTTCTTCCCTTCTCTTTTTCGTTACTTCATCAATTCGTGATTTCTTGCTCTCTGTTCGGCGAATTCAGAAATCAATTCGCTAATTATTCGTGTTTGCGTGTATTCTTTTTTCTTTAAACACAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAGCCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACAGAGCATACCA
mRNA sequence
ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGACGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTCCCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAGCCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACAGAGCATACCA
Coding sequence (CDS)
ATGCAGCAGAGATCTTTGAGCTTGTTCCGAGCAACTGACGATCATTGCATAATCATCGGCCCTACACAAGAGCCGCAGGGAAGACGCTCTCCATCAAGAAGATCAACGGACGGTTTAGACGGCGGCGGTCTTCTTCCGGTTTCCGATCCTCGCTCCGGCTTTAGGAATCGGGATCACGTTTCGCCCTACAGGTTGGCGGAGAGGTGGATTCATTTGATTCCCTTGGCTCTGTTCCTCGTCGTCTTCATTCTCTGGTGGTTCTCTTATCCAGTGAATTTGGAGATCAAGGATGAAGAAATTACCGGAGTTTATCCATACGAGTTTCCGGAGCCGCCGAAGAATTACATTGATCACGTCGAACTTGCCGTCTTAGGAGCTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCAGAGGCGCTCGAGATTTACAGAGCATACCA
Protein sequence
MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP
Homology
BLAST of MS020665 vs. NCBI nr
Match:
XP_022146089.1 (uncharacterized protein LOC111015385 [Momordica charantia])
HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
Query: 1 MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60
MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV
Sbjct: 1 MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60
Query: 61 SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120
SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE
Sbjct: 61 SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120
Query: 121 LAVLGAAGMQIASSPLNLTSRGARDLQSIP 151
LAVLGAAGMQIASSPLNLT RGARDLQSIP
Sbjct: 121 LAVLGAAGMQIASSPLNLTGRGARDLQSIP 150
BLAST of MS020665 vs. NCBI nr
Match:
XP_038902298.1 (uncharacterized protein LOC120088933 [Benincasa hispida])
HSP 1 Score: 185.3 bits (469), Expect = 4.0e-43
Identity = 101/155 (65.16%), Postives = 115/155 (74.19%), Query Frame = 0
Query: 1 MQQRSLSLFRATDDH-----CIIIGPTQEPQGRRSPSRRSTDGLD--GGGLLPVSDPRSG 60
MQQR+LS FRAT+DH I PTQEP+GRRSP RS+ +D GLLP+SDPR
Sbjct: 1 MQQRALSSFRATNDHDHCNIMIFSTPTQEPRGRRSPPSRSSILMDDSNAGLLPISDPRFS 60
Query: 61 FRNRDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPY-EFPEPP 120
+ RDH S YR AERWIHLIPL L L++FILWW SYPVN+ IKD I+ VY +FPE P
Sbjct: 61 TKKRDHNSRYRFAERWIHLIPLILLLILFILWWSSYPVNMVIKDGAISAVYTNDQFPEAP 120
Query: 121 KNYIDHVELAVLGAAGMQIASSPLNLTSRGARDLQ 148
K YIDHVELAVLG AGMQIASSPLN+TS G RDL+
Sbjct: 121 K-YIDHVELAVLGDAGMQIASSPLNVTSIGDRDLR 154
BLAST of MS020665 vs. NCBI nr
Match:
XP_022986953.1 (uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima])
HSP 1 Score: 182.2 bits (461), Expect = 3.3e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0
Query: 1 MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
MQQRS S FRA TDDHC II P QEPQGR SP RS D G LPVSDP R
Sbjct: 1 MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60
Query: 61 RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD I VY EFPE PK YI
Sbjct: 61 RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148
BLAST of MS020665 vs. NCBI nr
Match:
XP_022986954.1 (uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima])
HSP 1 Score: 182.2 bits (461), Expect = 3.3e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0
Query: 1 MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
MQQRS S FRA TDDHC II P QEPQGR SP RS D G LPVSDP R
Sbjct: 1 MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60
Query: 61 RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD I VY EFPE PK YI
Sbjct: 61 RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148
BLAST of MS020665 vs. NCBI nr
Match:
KAG7010594.1 (hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 181.4 bits (459), Expect = 5.7e-42
Identity = 104/152 (68.42%), Postives = 111/152 (73.03%), Query Frame = 0
Query: 1 MQQRS--LSLFRA-TDDHCII-IGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
MQQRS S FRA TDDHC I P QEPQGR SP RS D G +LPVSDP R
Sbjct: 1 MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDD-SSGSILPVSDP--SCRK 60
Query: 61 RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD I VY EFPE PK YI
Sbjct: 61 RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGGAGMQIASSPLNLTSVGARDLRT 148
BLAST of MS020665 vs. ExPASy TrEMBL
Match:
A0A6J1CX54 (uncharacterized protein LOC111015385 OS=Momordica charantia OX=3673 GN=LOC111015385 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 5.2e-81
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
Query: 1 MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60
MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV
Sbjct: 1 MQQRSLSLFRATDDHCIIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNRDHV 60
Query: 61 SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120
SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE
Sbjct: 61 SPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYIDHVE 120
Query: 121 LAVLGAAGMQIASSPLNLTSRGARDLQSIP 151
LAVLGAAGMQIASSPLNLT RGARDLQSIP
Sbjct: 121 LAVLGAAGMQIASSPLNLTGRGARDLQSIP 150
BLAST of MS020665 vs. ExPASy TrEMBL
Match:
A0A6J1JI18 (uncharacterized protein LOC111484535 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484535 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0
Query: 1 MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
MQQRS S FRA TDDHC II P QEPQGR SP RS D G LPVSDP R
Sbjct: 1 MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60
Query: 61 RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD I VY EFPE PK YI
Sbjct: 61 RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148
BLAST of MS020665 vs. ExPASy TrEMBL
Match:
A0A6J1JHI4 (uncharacterized protein LOC111484535 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484535 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 105/152 (69.08%), Postives = 111/152 (73.03%), Query Frame = 0
Query: 1 MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
MQQRS S FRA TDDHC II P QEPQGR SP RS D G LPVSDP R
Sbjct: 1 MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSFLPVSDP--SCRK 60
Query: 61 RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD I VY EFPE PK YI
Sbjct: 61 RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQS 149
DHVELA+LG AGMQIASSPLNLTS GARDL++
Sbjct: 121 DHVELAILGDAGMQIASSPLNLTSVGARDLRT 148
BLAST of MS020665 vs. ExPASy TrEMBL
Match:
A0A6J1FUE4 (uncharacterized protein LOC111448884 OS=Cucurbita moschata OX=3662 GN=LOC111448884 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 103/150 (68.67%), Postives = 108/150 (72.00%), Query Frame = 0
Query: 1 MQQRS--LSLFRA-TDDHC-IIIGPTQEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRN 60
MQQRS S FRA TDDHC II P QEPQGR SP RS D G +LPVSDP R
Sbjct: 1 MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPEIRSMDD-SSGSILPVSDP--SCRK 60
Query: 61 RDHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYEFPEPPKNYI 120
RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IKD I VY EFPE PK YI
Sbjct: 61 RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPK-YI 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDL 147
DHVELA+L AGMQIASSPLNLTS G RDL
Sbjct: 121 DHVELAILRGAGMQIASSPLNLTSVGTRDL 146
BLAST of MS020665 vs. ExPASy TrEMBL
Match:
A0A5D3CTN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00940 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29
Identity = 87/154 (56.49%), Postives = 97/154 (62.99%), Query Frame = 0
Query: 1 MQQRSLSLFR-ATDDHCIIIGPT--QEPQGRRSPSRRSTDGLDGGGLLPVSDPRSGFRNR 60
MQQR+ FR TD+HC ++ T +EPQG R S D G LLP+SDPR R R
Sbjct: 1 MQQRA---FRPTTDNHCSVMISTTSREPQGIR--SSMEDDFTAAGDLLPISDPRFSIRKR 60
Query: 61 DHVSPYRLAERWIHLIPLALFLVVFILWWFSYPVNLEIKDEEITGVYPYE-FPEPPKNYI 120
D S YR WIHLIPL L L++FILWW SYPV IKD I Y E PE PK Y+
Sbjct: 61 DRNSRYRFHVHWIHLIPLILLLILFILWWSSYPV---IKDGGIRADYEKERLPEVPK-YV 120
Query: 121 DHVELAVLGAAGMQIASSPLNLTSRGARDLQSIP 151
DH ELAVLG AGM IASSPLNLTS G RD + IP
Sbjct: 121 DHTELAVLGDAGMHIASSPLNLTSVGDRDSRIIP 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022146089.1 | 1.1e-80 | 99.33 | uncharacterized protein LOC111015385 [Momordica charantia] | [more] |
XP_038902298.1 | 4.0e-43 | 65.16 | uncharacterized protein LOC120088933 [Benincasa hispida] | [more] |
XP_022986953.1 | 3.3e-42 | 69.08 | uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima] | [more] |
XP_022986954.1 | 3.3e-42 | 69.08 | uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima] | [more] |
KAG7010594.1 | 5.7e-42 | 68.42 | hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CX54 | 5.2e-81 | 99.33 | uncharacterized protein LOC111015385 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A6J1JI18 | 1.6e-42 | 69.08 | uncharacterized protein LOC111484535 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1JHI4 | 1.6e-42 | 69.08 | uncharacterized protein LOC111484535 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1FUE4 | 1.8e-41 | 68.67 | uncharacterized protein LOC111448884 OS=Cucurbita moschata OX=3662 GN=LOC1114488... | [more] |
A0A5D3CTN8 | 2.7e-29 | 56.49 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |