MS020629 (gene) Bitter gourd (TR) v1

Overview


Name	MS020629
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Rhodanese domain-containing protein
Location	scaffold375: 1751026 .. 1751754 (-)
RNA-Seq Expression	MS020629
Synteny	MS020629

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGACTATTGATGTTCGAGATGCCAGAGATATGTTACAGAAAGGTTACCTTTATTTAGATGTCAGGTTGAAGCTTCTTTTTGTTTCTGATTGTGTTTGTCAAAATGAGAAAAATAAGATAATGAAGCTGCCTACAATTTAAGCTATGGTTTTGGTTGTATTGTAGGTCAGTTGAAGAGTATAACAAGAGCCATGTTGAGAATGCACTTAACGTACCTTACATGTTCATCACCCCACAAGGTAGAATTTGTTGCTAGTCTCGTAGGTTTGATCCGGTAGAATCTGACTTTTGCTATTAAACAGGCCGAGTAAAGAATCCAGACTTTCTTGCCCAAGTTTCATCTGTATTGAAGAAGGAAGATCATCTGGTTGTGGTAATGAGAAACACTATTCTTTTGATCTTTATATCTCTGATGCAGTTTTCAAGAGTAAAACCAATGAAAATAGCAAAATCTATCTATCTATCTATGCAGGCCTGCAACAGCGGTGGTAGAGCACTACGTGCTTGTGTTGATCTTCTTAATACGGTAAGATTCGAGATTAATGGAACTAACTTCTCAAAGTTTTCTAGAACTGCAAAAGAAATGGATCAGTATGGAGATTTATTGGGAAATTTCAGGGCTTCGAGCATGTGAGAAATATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTTCTGGTGACAAACCACCTGAAGAGCTCAAAATAGCTTGCAAATTCCGAGGT

mRNA sequence

GTGACTATTGATGTTCGAGATGCCAGAGATATGTTACAGAAAGGTTACCTTTATTTAGATGTCAGGTCAGTTGAAGAGTATAACAAGAGCCATGTTGAGAATGCACTTAACGTACCTTACATGTTCATCACCCCACAAGGTAGAATTTTAAAGAATCCAGACTTTCTTGCCCAAGTTTCATCTGTATTGAAGAAGGAAGATCATCTGGTTGTGGCCTGCAACAGCGGTGGTAGAGCACTACGTGCTTGTGTTGATCTTCTTAATACGGGCTTCGAGCATGTGAGAAATATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTTCTGGTGACAAACCACCTGAAGAGCTCAAAATAGCTTGCAAATTCCGAGGT

Coding sequence (CDS)

GTGACTATTGATGTTCGAGATGCCAGAGATATGTTACAGAAAGGTTACCTTTATTTAGATGTCAGGTCAGTTGAAGAGTATAACAAGAGCCATGTTGAGAATGCACTTAACGTACCTTACATGTTCATCACCCCACAAGGTAGAATTTTAAAGAATCCAGACTTTCTTGCCCAAGTTTCATCTGTATTGAAGAAGGAAGATCATCTGGTTGTGGCCTGCAACAGCGGTGGTAGAGCACTACGTGCTTGTGTTGATCTTCTTAATACGGGCTTCGAGCATGTGAGAAATATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTTCTGGTGACAAACCACCTGAAGAGCTCAAAATAGCTTGCAAATTCCGAGGT

Protein sequence

VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSSVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIACKFRG

Homology

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BLAST of MS020629 vs. NCBI nr
Match: XP_022146257.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Momordica charantia])

HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVS 60
           VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGR+ KNPDFLAQVS
Sbjct: 11  VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRV-KNPDFLAQVS 70

Query: 61  SVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKI 120
           SVLKKEDHLVVACNSGGRALRACVDLLN GFEHVRNMGGGYSAWVDSGFSG+KPPEELKI
Sbjct: 71  SVLKKEDHLVVACNSGGRALRACVDLLNAGFEHVRNMGGGYSAWVDSGFSGNKPPEELKI 130

Query: 121 ACKFRG 127
           ACKFRG
Sbjct: 131 ACKFRG 135

[Close]

BLAST of MS020629 vs. NCBI nr
Match: XP_038901855.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 6.2e-58
Identity = 108/126 (85.71%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVS 60
           VT+DVR A+D+LQKG+LYLDVR+VEEYNK HVENALNVPYMF TP+GR+ KNPDFLAQV 
Sbjct: 11  VTVDVRVAKDLLQKGHLYLDVRTVEEYNKGHVENALNVPYMFFTPEGRV-KNPDFLAQVM 70

Query: 61  SVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKI 120
           S+LKKEDHLVVACNSGGR LRACVDLLN GFEHV NMGGGYSAWVDSGF+GDKPPEELK 
Sbjct: 71  SILKKEDHLVVACNSGGRGLRACVDLLNVGFEHVNNMGGGYSAWVDSGFAGDKPPEELKT 130

Query: 121 ACKFRG 127
           ACKFRG
Sbjct: 131 ACKFRG 135

[Close]

BLAST of MS020629 vs. NCBI nr
Match: XP_008457677.1 (PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X2 [Cucumis melo] >TYJ99554.1 rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 4.0e-57
Identity = 104/125 (83.20%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV+ A+D+L+KG+LYLDVR+VEEYNK HVENALNVPYMF+TP+GR+ KNPDFLAQV+S
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRV-KNPDFLAQVTS 63

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           +LKKEDH+VVACNSGGR LRACVDLLN GFEHV NMGGGYSAWVDSGF+G+KPPEELKIA
Sbjct: 64  ILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIA 123

Query: 122 CKFRG 127
           CKFRG
Sbjct: 124 CKFRG 127

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BLAST of MS020629 vs. NCBI nr
Match: KAA0045726.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 4.0e-57
Identity = 103/125 (82.40%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV+ A+D+L+KG+LYLDVR+VEEYNK HVENALNVPYMF+TP+G  +KNPDFLAQV+S
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGSRVKNPDFLAQVTS 63

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           +LKKEDH+VVACNSGGR LRACVDLLN GFEHV NMGGGYSAWVDSGF+G+KPPEELKIA
Sbjct: 64  ILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIA 123

Query: 122 CKFRG 127
           CKFRG
Sbjct: 124 CKFRG 128

[Close]

BLAST of MS020629 vs. NCBI nr
Match: XP_022985695.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 102/126 (80.95%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVS 60
           VT+DV+ A+D+LQKG LYLDVR+VEEYNK HVENALNVPYMF+TP+GR+ KNPDFLAQV+
Sbjct: 11  VTVDVQVAKDLLQKGQLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRV-KNPDFLAQVT 70

Query: 61  SVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKI 120
           S+LKKEDH+VVACNSGGR  RAC+DL N G+EHV+NMGGGYSAWVDSGF+GDKP EELKI
Sbjct: 71  SILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMGGGYSAWVDSGFAGDKPAEELKI 130

Query: 121 ACKFRG 127
           ACKFRG
Sbjct: 131 ACKFRG 135

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BLAST of MS020629 vs. ExPASy Swiss-Prot
Match: Q8RUD6 (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-48
Identity = 86/124 (69.35%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV  A+  L  G+ YLDVR+ EE+ KSHVE ALN+PYMF T +GR++ NPDFL+QV+S
Sbjct: 43  TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVI-NPDFLSQVAS 102

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           V KK++HL+VACN+GGR  RACVDLLN G++HV NMGGGYSAWVD+GF+GDKPPE+LKIA
Sbjct: 103 VCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPPEDLKIA 162

Query: 122 CKFR 126
           CKFR
Sbjct: 163 CKFR 165

[Close]

BLAST of MS020629 vs. ExPASy Swiss-Prot
Match: F4IPI4 (Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=STR17 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-27
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHV--ENALNVPYMFITPQGRILKNPDFLAQ 60
           +TIDV  A+ +L  GY +LDVR+VEE+ K HV  EN  NVPY   TPQG+ + NP+FL  
Sbjct: 33  ITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEI-NPNFLKH 92

Query: 61  VSSVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEEL 120
           VSS+  + DHL++ C SG R+L A   L+++GF+ VRNM GGY AWV+  F      +EL
Sbjct: 93  VSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKEL 152

[Close]

BLAST of MS020629 vs. ExPASy Swiss-Prot
Match: Q9FKW8 (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.9e-27
Identity = 58/119 (48.74%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENA--LNVPYMFITPQGRILKNPDFLAQ 60
           V++DV  A+ +LQ G+ YLDVR+ +E+ + H E A  +N+PYM  TPQGR+ KN +FL Q
Sbjct: 15  VSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRV-KNQEFLEQ 74

Query: 61  VSSVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEE 118
           VSS+L   D ++V C SG R+L+A  +L+  G++ VRN+GGGY AWVD  F  +   EE
Sbjct: 75  VSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPINTEEEE 132

[Close]

BLAST of MS020629 vs. ExPASy Swiss-Prot
Match: Q39129 (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR16 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           ++ V  A D+L  G+ YLDVR+ EE+++ H   A+NVPYM     G + KNPDFL QVSS
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASG-MSKNPDFLEQVSS 69

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSG 109
              + D+++V C SGGR+++A  DLL+ GF  V+++ GGYSAW  +G
Sbjct: 70  HFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

[Close]

BLAST of MS020629 vs. ExPASy Swiss-Prot
Match: Q38853 (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR15 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-21
Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           ++ VR AR++ Q GY YLDVR+ +E++  H   A+NVPYM+    G ++KNP FL QVSS
Sbjct: 72  SVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYMYRVGSG-MVKNPSFLRQVSS 131

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDS 108
             +K D +++ C SG  +  A  DLL  GF  + ++ GGY AW ++
Sbjct: 132 HFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTEN 176

[Close]

BLAST of MS020629 vs. ExPASy TrEMBL
Match: A0A6J1CZ38 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111015512 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVS 60
           VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGR+ KNPDFLAQVS
Sbjct: 11  VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRV-KNPDFLAQVS 70

Query: 61  SVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKI 120
           SVLKKEDHLVVACNSGGRALRACVDLLN GFEHVRNMGGGYSAWVDSGFSG+KPPEELKI
Sbjct: 71  SVLKKEDHLVVACNSGGRALRACVDLLNAGFEHVRNMGGGYSAWVDSGFSGNKPPEELKI 130

Query: 121 ACKFRG 127
           ACKFRG
Sbjct: 131 ACKFRG 135

[Close]

BLAST of MS020629 vs. ExPASy TrEMBL
Match: A0A5D3BKL1 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001240 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 104/125 (83.20%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV+ A+D+L+KG+LYLDVR+VEEYNK HVENALNVPYMF+TP+GR+ KNPDFLAQV+S
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRV-KNPDFLAQVTS 63

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           +LKKEDH+VVACNSGGR LRACVDLLN GFEHV NMGGGYSAWVDSGF+G+KPPEELKIA
Sbjct: 64  ILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIA 123

Query: 122 CKFRG 127
           CKFRG
Sbjct: 124 CKFRG 127

[Close]

BLAST of MS020629 vs. ExPASy TrEMBL
Match: A0A5A7TUB4 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002460 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 103/125 (82.40%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV+ A+D+L+KG+LYLDVR+VEEYNK HVENALNVPYMF+TP+G  +KNPDFLAQV+S
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGSRVKNPDFLAQVTS 63

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           +LKKEDH+VVACNSGGR LRACVDLLN GFEHV NMGGGYSAWVDSGF+G+KPPEELKIA
Sbjct: 64  ILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIA 123

Query: 122 CKFRG 127
           CKFRG
Sbjct: 124 CKFRG 128

[Close]

BLAST of MS020629 vs. ExPASy TrEMBL
Match: A0A1S3C5M3 (rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 104/125 (83.20%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV+ A+D+L+KG+LYLDVR+VEEYNK HVENALNVPYMF+TP+GR+ KNPDFLAQV+S
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRV-KNPDFLAQVTS 63

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           +LKKEDH+VVACNSGGR LRACVDLLN GFEHV NMGGGYSAWVDSGF+G+KPPEELKIA
Sbjct: 64  ILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIA 123

Query: 122 CKFRG 127
           CKFRG
Sbjct: 124 CKFRG 127

[Close]

BLAST of MS020629 vs. ExPASy TrEMBL
Match: A0A6J1JC15 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111483675 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 102/126 (80.95%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVS 60
           VT+DV+ A+D+LQKG LYLDVR+VEEYNK HVENALNVPYMF+TP+GR+ KNPDFLAQV+
Sbjct: 11  VTVDVQVAKDLLQKGQLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRV-KNPDFLAQVT 70

Query: 61  SVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKI 120
           S+LKKEDH+VVACNSGGR  RAC+DL N G+EHV+NMGGGYSAWVDSGF+GDKP EELKI
Sbjct: 71  SILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMGGGYSAWVDSGFAGDKPAEELKI 130

Query: 121 ACKFRG 127
           ACKFRG
Sbjct: 131 ACKFRG 135

[Close]

BLAST of MS020629 vs. TAIR 10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-49
Identity = 86/124 (69.35%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           T+DV  A+  L  G+ YLDVR+ EE+ KSHVE ALN+PYMF T +GR++ NPDFL+QV+S
Sbjct: 43  TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVI-NPDFLSQVAS 102

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEELKIA 121
           V KK++HL+VACN+GGR  RACVDLLN G++HV NMGGGYSAWVD+GF+GDKPPE+LKIA
Sbjct: 103 VCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPPEDLKIA 162

Query: 122 CKFR 126
           CKFR
Sbjct: 163 CKFR 165

[Close]

BLAST of MS020629 vs. TAIR 10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-28
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHV--ENALNVPYMFITPQGRILKNPDFLAQ 60
           +TIDV  A+ +L  GY +LDVR+VEE+ K HV  EN  NVPY   TPQG+ + NP+FL  
Sbjct: 33  ITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEI-NPNFLKH 92

Query: 61  VSSVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEEL 120
           VSS+  + DHL++ C SG R+L A   L+++GF+ VRNM GGY AWV+  F      +EL
Sbjct: 93  VSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKEL 152

[Close]

BLAST of MS020629 vs. TAIR 10
Match: AT5G66170.3 (sulfurtransferase 18 )

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-28
Identity = 58/119 (48.74%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENA--LNVPYMFITPQGRILKNPDFLAQ 60
           V++DV  A+ +LQ G+ YLDVR+ +E+ + H E A  +N+PYM  TPQGR+ KN +FL Q
Sbjct: 15  VSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRV-KNQEFLEQ 74

Query: 61  VSSVLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSGFSGDKPPEE 118
           VSS+L   D ++V C SG R+L+A  +L+  G++ VRN+GGGY AWVD  F  +   EE
Sbjct: 75  VSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPINTEEEE 132

[Close]

BLAST of MS020629 vs. TAIR 10
Match: AT5G66170.2 (sulfurtransferase 18 )

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-26
Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 1   VTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENA--LNVPYMFITPQGRILKNPDFLAQ 60
           V++DV  A+ +LQ G+ YLDVR+ +E+ + H E A  +N+PYM  TPQGR+ KN +FL Q
Sbjct: 15  VSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRV-KNQEFLEQ 74

Query: 61  VSSVLKKEDHLVVACNSGGRALRACVDLLN--TGFEHVRNMGGGYSAWVDSGFSGDKPPE 118
           VSS+L   D ++V C SG R+L+A  +L+   +G++ VRN+GGGY AWVD  F  +   E
Sbjct: 75  VSSLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDHSFPINTEEE 134

[Close]

BLAST of MS020629 vs. TAIR 10
Match: AT5G66040.1 (sulfurtransferase protein 16 )

HSP 1 Score: 107.5 bits (267), Expect = 8.2e-24
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 2   TIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRILKNPDFLAQVSS 61
           ++ V  A D+L  G+ YLDVR+ EE+++ H   A+NVPYM     G + KNPDFL QVSS
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASG-MSKNPDFLEQVSS 69

Query: 62  VLKKEDHLVVACNSGGRALRACVDLLNTGFEHVRNMGGGYSAWVDSG 109
              + D+++V C SGGR+++A  DLL+ GF  V+++ GGYSAW  +G
Sbjct: 70  HFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

The following BLAST results are available for this feature:

BLAST of MS020629 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146257.1	4.5e-64	96.83	protein HIGH ARSENIC CONTENT 1, mitochondrial [Momordica charantia]	[more]
XP_038901855.1	6.2e-58	85.71	protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida]	[more]
XP_008457677.1	4.0e-57	83.20	PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X2...	[more]
KAA0045726.1	4.0e-57	82.40	rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa]	[more]
XP_022985695.1	3.8e-55	80.95	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima]	[more]

BLAST of MS020629 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RUD6	2.1e-48	69.35	Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4IPI4	3.5e-27	50.41	Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q9FKW8	5.9e-27	48.74	Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 S...	[more]
Q39129	1.2e-22	47.66	Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38853	2.8e-21	43.40	Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of MS020629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ38	2.2e-64	96.83	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3BKL1	2.0e-57	83.20	Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7TUB4	2.0e-57	82.40	Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5M3	2.0e-57	83.20	rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis...	[more]
A0A6J1JC15	1.8e-55	80.95	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of MS020629 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21045.1	1.5e-49	69.35	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT2G17850.1	2.5e-28	50.41	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66170.3	4.2e-28	48.74	sulfurtransferase 18	[more]
AT5G66170.2	1.0e-26	47.93	sulfurtransferase 18	[more]
AT5G66040.1	8.2e-24	47.66	sulfurtransferase protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 3..110 e-value: 3.9E-17 score: 72.9
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 7..105 e-value: 2.3E-16 score: 60.3
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 12..113 score: 17.680603
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 1..110 e-value: 2.1E-32 score: 113.6
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 2..109
None	No IPR available	PANTHER	PTHR44542:SF14	PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED	coord: 2..124
None	No IPR available	CDD	cd00158	RHOD	coord: 7..105 e-value: 2.38585E-22 score: 81.9622
IPR044684	Rhodanese-like domain-containing protein STR17/STR18/HARC1-like	PANTHER	PTHR44542	THIOSULFATE SULFURTRANSFERASE 18	coord: 2..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020629.1	MS020629.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity