MS020602 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTATTGCTATGGATGTACTCCCCGCCCTTCCGCTCCTCTGCCGTATCCTATCCTCGTTCTTCTCGCCGTAGTCTCCATCTTGATCGGATTGTCCTCCCTTTTCCCCTCCGAGGGCATCGACTTCTCCGAATTCCAAATCAATTGGCCTCTTCTCGCTGTGCCGGTAACTATTCTTGTTCTCGTTCGCTGCTTGTCGTCCATGGATTCTTCCTCTTCCAGGTACTATGGCTGCGCTTGTAATCGGGGGGGCTGGAAGACGACGCACTGTCGGTGCGGCCATGGCTCCTGG ATGACTTATTGCTATGGATGTACTCCCCGCCCTTCCGCTCCTCTGCCGTATCCTATCCTCGTTCTTCTCGCCGTAGTCTCCATCTTGATCGGATTGTCCTCCCTTTTCCCCTCCGAGGGCATCGACTTCTCCGAATTCCAAATCAATTGGCCTCTTCTCGCTGTGCCGGTAACTATTCTTGTTCTCGTTCGCTGCTTGTCGTCCATGGATTCTTCCTCTTCCAGGTACTATGGCTGCGCTTGTAATCGGGGGGGCTGGAAGACGACGCACTGTCGGTGCGGCCATGGCTCCTGG ATGACTTATTGCTATGGATGTACTCCCCGCCCTTCCGCTCCTCTGCCGTATCCTATCCTCGTTCTTCTCGCCGTAGTCTCCATCTTGATCGGATTGTCCTCCCTTTTCCCCTCCGAGGGCATCGACTTCTCCGAATTCCAAATCAATTGGCCTCTTCTCGCTGTGCCGGTAACTATTCTTGTTCTCGTTCGCTGCTTGTCGTCCATGGATTCTTCCTCTTCCAGGTACTATGGCTGCGCTTGTAATCGGGGGGGCTGGAAGACGACGCACTGTCGGTGCGGCCATGGCTCCTGG MTYCYGCTPRPSAPLPYPILVLLAVVSILIGLSSLFPSEGIDFSEFQINWPLLAVPVTILVLVRCLSSMDSSSSRYYGCACNRGGWKTTHCRCGHGSW Homology
BLAST of MS020602 vs. NCBI nr
Match: KAG6571042.1 (hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.5 bits (389), Expect = 4.9e-34 Identity = 77/98 (78.57%), Postives = 84/98 (85.71%), Query Frame = 0
BLAST of MS020602 vs. NCBI nr
Match: KAA0045689.1 (hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa] >TYJ99593.1 hypothetical protein E5676_scaffold123G001670 [Cucumis melo var. makuwa]) HSP 1 Score: 154.5 bits (389), Expect = 4.9e-34 Identity = 80/97 (82.47%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of MS020602 vs. NCBI nr
Match: KGN61893.1 (hypothetical protein Csa_006600 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 5.4e-33 Identity = 78/97 (80.41%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of MS020602 vs. NCBI nr
Match: KAG6605007.1 (hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 6.2e-29 Identity = 74/98 (75.51%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of MS020602 vs. NCBI nr
Match: KMT01460.1 (hypothetical protein BVRB_9g214670 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07 Identity = 39/91 (42.86%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of MS020602 vs. ExPASy TrEMBL
Match: A0A5D3BJW1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001670 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34 Identity = 80/97 (82.47%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of MS020602 vs. ExPASy TrEMBL
Match: A0A0A0LJB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263880 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.6e-33 Identity = 78/97 (80.41%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of MS020602 vs. ExPASy TrEMBL
Match: A0A1R3JDI7 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17251 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.9e-07 Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of MS020602 vs. ExPASy TrEMBL
Match: A0A2C9UZU5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G089800 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.5e-07 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 0
BLAST of MS020602 vs. ExPASy TrEMBL
Match: A0A6J1C2N0 (uncharacterized protein LOC111007895 OS=Momordica charantia OX=3673 GN=LOC111007895 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.5e-07 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS020602 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 3.2e-07 Identity = 30/61 (49.18%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of MS020602 vs. TAIR 10
Match: AT2G21185.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 2.1e-06 Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|