MS020554 (gene) Bitter gourd (TR) v1

Overview


Name	MS020554
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold375: 1150613 .. 1150813 (-)
RNA-Seq Expression	MS020554
Synteny	MS020554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACTTGCTACTGCTGTTGGACTGATCCTATTAAACATGAATTCTGAAATTCAAATTGTTAAGAATTTATGGTCCTGCGAGTACTGCCATGAGTTTATGAAACCGATTTCAAAGATTTACCAAAGGGAGATCATAATGAGGGATAGAATCTGCTTCCACCATTTCGGGAATGGCAACTGCTCTTGCAAGGACTATCAG

mRNA sequence

AAAAAACTTGCTACTGCTGTTGGACTGATCCTATTAAACATGAATTCTGAAATTCAAATTGTTAAGAATTTATGGTCCTGCGAGTACTGCCATGAGTTTATGAAACCGATTTCAAAGATTTACCAAAGGGAGATCATAATGAGGGATAGAATCTGCTTCCACCATTTCGGGAATGGCAACTGCTCTTGCAAGGACTATCAG

Coding sequence (CDS)

AAAAAACTTGCTACTGCTGTTGGACTGATCCTATTAAACATGAATTCTGAAATTCAAATTGTTAAGAATTTATGGTCCTGCGAGTACTGCCATGAGTTTATGAAACCGATTTCAAAGATTTACCAAAGGGAGATCATAATGAGGGATAGAATCTGCTTCCACCATTTCGGGAATGGCAACTGCTCTTGCAAGGACTATCAG

Protein sequence

KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGNCSCKDYQ

Homology

[Close]

BLAST of MS020554 vs. NCBI nr
Match: QHO31919.1 (Pentatricopeptide repeat-containing protein [Arachis hypogaea])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 350 EKLALAYGLIRNRQGSEIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 409

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 410 CSCKDY 415

[Close]

BLAST of MS020554 vs. NCBI nr
Match: XP_016171339.1 (pentatricopeptide repeat-containing protein At4g21065 [Arachis ipaensis] >XP_016171341.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis ipaensis] >XP_016171343.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis ipaensis] >XP_016171344.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis ipaensis] >XP_025672180.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis hypogaea] >XP_025672181.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis hypogaea] >XP_025672182.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis hypogaea] >QHN97391.1 Pentatricopeptide repeat-containing protein [Arachis hypogaea] >QHN97392.1 Pentatricopeptide repeat-containing protein [Arachis hypogaea] >QHN97393.1 Pentatricopeptide repeat-containing protein [Arachis hypogaea] >QHN97394.1 Pentatricopeptide repeat-containing protein [Arachis hypogaea])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 518 EKLALAYGLIRNRQGSEIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 577

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 578 CSCKDY 583

[Close]

BLAST of MS020554 vs. NCBI nr
Match: XP_025615078.1 (pentatricopeptide repeat-containing protein At4g21065-like [Arachis hypogaea])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 509 EKLALAYGLIRNRQGSEIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 568

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 569 CSCKDY 574

[Close]

BLAST of MS020554 vs. NCBI nr
Match: XP_020962458.1 (pentatricopeptide repeat-containing protein At4g21065-like [Arachis ipaensis] >XP_025666663.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis hypogaea])

HSP 1 Score: 100.9 bits (250), Expect = 4.4e-18
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     S+I+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 509 EKLALAYGLIRNRQGSKIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 568

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 569 CSCKDY 574

[Close]

BLAST of MS020554 vs. NCBI nr
Match: RYR45114.1 (hypothetical protein Ahy_A07g030979 isoform C [Arachis hypogaea])

HSP 1 Score: 100.9 bits (250), Expect = 4.4e-18
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     S+I+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 452 EKLALAYGLIRNRQGSKIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 511

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 512 CSCKDY 517

[Close]

BLAST of MS020554 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +K+ATA GLI  +    I+IVKNL  CE CH  +K ISK+Y+R+I +RDR  FHHF +G+
Sbjct: 580 EKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGS 639

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 640 CSCMDY 645

[Close]

BLAST of MS020554 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     +++ IVKNL  C  CHE  K ISKIY+REII RDR  FHHF +G 
Sbjct: 675 EKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGV 734

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 735 CSCNDY 740

[Close]

BLAST of MS020554 vs. ExPASy Swiss-Prot
Match: Q9LXY5 (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.9e-14
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GL+     + ++I KNL  C  CH F K +SK + REII+RDR+ FHHF +G 
Sbjct: 515 EKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGI 574

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 575 CSCNDY 580

[Close]

BLAST of MS020554 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.9e-14
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A G++     + I+IVKNL  CE CH   K IS++Y RE+I+RDR  FHHF NG 
Sbjct: 556 EKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGV 615

Query: 61  CSCKDY 67
           CSC+DY
Sbjct: 616 CSCRDY 621

[Close]

BLAST of MS020554 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.9e-14
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA   GLI     + I+I+KNL  C+ CH+  K ISKIY+R+I+MRDR  FHHF +G 
Sbjct: 554 EKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGK 613

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 614 CSCGDY 619

[Close]

BLAST of MS020554 vs. ExPASy TrEMBL
Match: A0A445C2F6 (DYW_deaminase domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g030979 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     S+I+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 452 EKLALAYGLIRNRQGSKIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 511

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 512 CSCKDY 517

[Close]

BLAST of MS020554 vs. ExPASy TrEMBL
Match: W9RRB5 (DYW_deaminase domain-containing protein OS=Morus notabilis OX=981085 GN=L484_008746 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18
Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI  +  SEI+I KNL SCE CH FMK ISKIYQR+IIMRDRI FHHF NG+
Sbjct: 182 EKLALAFGLIKTSPGSEIRIAKNLRSCEDCHAFMKVISKIYQRDIIMRDRILFHHFSNGD 241

Query: 61  CSCKDY 67
           CSC+DY
Sbjct: 242 CSCRDY 247

[Close]

BLAST of MS020554 vs. ExPASy TrEMBL
Match: A0A6P5ML97 (pentatricopeptide repeat-containing protein At4g21065-like OS=Arachis duranensis OX=130453 GN=LOC110272342 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.2e-18
Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIYQ+ II+RDRI FHHF NG+
Sbjct: 509 EKLALAYGLIRNRQGSEIRIVKNLRSCEDCHEFMKLVSKIYQKRIIVRDRIRFHHFKNGD 568

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 569 CSCKDY 574

[Close]

BLAST of MS020554 vs. ExPASy TrEMBL
Match: A0A6P4CPK8 (pentatricopeptide repeat-containing protein At4g21065 OS=Arachis duranensis OX=130453 GN=LOC107478929 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.1e-18
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     S+I+IVKNL SCE CHEFMK +SKIYQREII+RDRI FHHF NG+
Sbjct: 509 EKLALAYGLIRNRQGSKIRIVKNLRSCEDCHEFMKLVSKIYQREIIVRDRIRFHHFKNGD 568

Query: 61  CSCKDY 67
           CSCKD+
Sbjct: 569 CSCKDH 574

[Close]

BLAST of MS020554 vs. ExPASy TrEMBL
Match: A0A2P5CVR0 (DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118380 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.1e-18
Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI  +  +EI+IVKNL SCE CH FMK ISKIY+R+IIMRDRI FHHF NG 
Sbjct: 511 EKLALAFGLIKTSPRTEIRIVKNLRSCEDCHAFMKVISKIYERDIIMRDRIRFHHFRNGE 570

Query: 61  CSCKDY 67
           CSCKDY
Sbjct: 571 CSCKDY 576

[Close]

BLAST of MS020554 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-16
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GLI     +++ IVKNL  C  CHE  K ISKIY+REII RDR  FHHF +G 
Sbjct: 675 EKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGV 734

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 735 CSCNDY 740

[Close]

BLAST of MS020554 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-16
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +K+ATA GLI  +    I+IVKNL  CE CH  +K ISK+Y+R+I +RDR  FHHF +G+
Sbjct: 580 EKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGS 639

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 640 CSCMDY 645

[Close]

BLAST of MS020554 vs. TAIR 10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-15
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A GL+     + ++I KNL  C  CH F K +SK + REII+RDR+ FHHF +G 
Sbjct: 515 EKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGI 574

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 575 CSCNDY 580

[Close]

BLAST of MS020554 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-15
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA   GLI     + I+I+KNL  C+ CH+  K ISKIY+R+I+MRDR  FHHF +G 
Sbjct: 554 EKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGK 613

Query: 61  CSCKDY 67
           CSC DY
Sbjct: 614 CSCGDY 619

[Close]

BLAST of MS020554 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-15
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 1   KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYQREIIMRDRICFHHFGNGN 60
           +KLA A G++     + I+IVKNL  CE CH   K IS++Y RE+I+RDR  FHHF NG 
Sbjct: 556 EKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGV 615

Query: 61  CSCKDY 67
           CSC+DY
Sbjct: 616 CSCRDY 621

The following BLAST results are available for this feature:

BLAST of MS020554 vs. NCBI nr


Match Name	E-value	Identity	Description
QHO31919.1	1.5e-18	74.24	Pentatricopeptide repeat-containing protein [Arachis hypogaea]	[more]
XP_016171339.1	1.5e-18	74.24	pentatricopeptide repeat-containing protein At4g21065 [Arachis ipaensis] >XP_016...	[more]
XP_025615078.1	1.5e-18	74.24	pentatricopeptide repeat-containing protein At4g21065-like [Arachis hypogaea]	[more]
XP_020962458.1	4.4e-18	72.73	pentatricopeptide repeat-containing protein At4g21065-like [Arachis ipaensis] >X...	[more]
RYR45114.1	4.4e-18	72.73	hypothetical protein Ahy_A07g030979 isoform C [Arachis hypogaea]	[more]

BLAST of MS020554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI80	1.4e-14	56.06	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	1.4e-14	59.09	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9LXY5	8.9e-14	51.52	Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX...	[more]
Q9FG16	8.9e-14	54.55	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	8.9e-14	54.55	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS020554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A445C2F6	2.1e-18	72.73	DYW_deaminase domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g0...	[more]
W9RRB5	2.8e-18	71.21	DYW_deaminase domain-containing protein OS=Morus notabilis OX=981085 GN=L484_008...	[more]
A0A6P5ML97	6.2e-18	71.21	pentatricopeptide repeat-containing protein At4g21065-like OS=Arachis duranensis...	[more]
A0A6P4CPK8	8.1e-18	71.21	pentatricopeptide repeat-containing protein At4g21065 OS=Arachis duranensis OX=1...	[more]
A0A2P5CVR0	8.1e-18	71.21	DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118...	[more]

BLAST of MS020554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	9.7e-16	59.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	9.7e-16	56.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G56550.1	6.3e-15	51.52	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	6.3e-15	54.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G06540.1	6.3e-15	54.55	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 2..56 e-value: 3.8E-13 score: 49.4
None	No IPR available	PANTHER	PTHR47924:SF41	BNAC07G48870D PROTEIN	coord: 2..61
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 2..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020554.1	MS020554.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding