MS020548 (gene) Bitter gourd (TR) v1

Overview
NameMS020548
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4408 domain-containing protein
Locationscaffold375: 1085630 .. 1086310 (+)
RNA-Seq ExpressionMS020548
SyntenyMS020548
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTACGACATAAGAGCGGAGAAGGCGAACGCGATCCTCAAGCATCGGCAGCTCCGGAAGATCGCTAACCTATTTCGGTTCATCGAATTGTGCCTCGTTCTCGTTCTGATCTCGAGATTCTCCAGTCATCTGCCCAGTGCCGTCAAGAACTCCGGTGAGTACTTCAGGTGCTTGTCGGTCACTTTAATCAGTCCGCGCTTCGTGTTTCTGATCGGAAACGCTATAGTCATCACTCTGTTCGCCAAATCGGGACAGTTCTCCGCTAAAGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGATTTCATCAAAAACAGCGAGAAGAATCAAAAAACTCGACACGCTGAGATCGAGTATCGAACGAAGCAGATCGATGGCGATGGCGATGGCGATGGTGACGCCTCCGTCGCGGCAAAAAAAGTCGTTAATCCTGAAGAAATCAAGCATTATCGGAGGAGTCAATCGGAGAAAATCGCCGTCGCGCAGCAGGAGAATCCGCATCGTGAACTCCGCCGATCGGAGACGGAGAAATGCAAGAAACTCGTCCGATTCAGCGAGGGAGCGGCGAAAAGCTCGTATCCGGAGGACAGGATGAGCAACGAGGAGTTCCGGCAGACGGTGGAGGCGTTCATCGCGCGGCAGCAGAGGTTGCGAAGGGAGGAAGAACACTGTGTA

mRNA sequence

TTCTACGACATAAGAGCGGAGAAGGCGAACGCGATCCTCAAGCATCGGCAGCTCCGGAAGATCGCTAACCTATTTCGGTTCATCGAATTGTGCCTCGTTCTCGTTCTGATCTCGAGATTCTCCAGTCATCTGCCCAGTGCCGTCAAGAACTCCGGTGAGTACTTCAGGTGCTTGTCGGTCACTTTAATCAGTCCGCGCTTCGTGTTTCTGATCGGAAACGCTATAGTCATCACTCTGTTCGCCAAATCGGGACAGTTCTCCGCTAAAGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGATTTCATCAAAAACAGCGAGAAGAATCAAAAAACTCGACACGCTGAGATCGAGTATCGAACGAAGCAGATCGATGGCGATGGCGATGGCGATGGTGACGCCTCCGTCGCGGCAAAAAAAGTCGTTAATCCTGAAGAAATCAAGCATTATCGGAGGAGTCAATCGGAGAAAATCGCCGTCGCGCAGCAGGAGAATCCGCATCGTGAACTCCGCCGATCGGAGACGGAGAAATGCAAGAAACTCGTCCGATTCAGCGAGGGAGCGGCGAAAAGCTCGTATCCGGAGGACAGGATGAGCAACGAGGAGTTCCGGCAGACGGTGGAGGCGTTCATCGCGCGGCAGCAGAGGTTGCGAAGGGAGGAAGAACACTGTGTA

Coding sequence (CDS)

TTCTACGACATAAGAGCGGAGAAGGCGAACGCGATCCTCAAGCATCGGCAGCTCCGGAAGATCGCTAACCTATTTCGGTTCATCGAATTGTGCCTCGTTCTCGTTCTGATCTCGAGATTCTCCAGTCATCTGCCCAGTGCCGTCAAGAACTCCGGTGAGTACTTCAGGTGCTTGTCGGTCACTTTAATCAGTCCGCGCTTCGTGTTTCTGATCGGAAACGCTATAGTCATCACTCTGTTCGCCAAATCGGGACAGTTCTCCGCTAAAGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGATTTCATCAAAAACAGCGAGAAGAATCAAAAAACTCGACACGCTGAGATCGAGTATCGAACGAAGCAGATCGATGGCGATGGCGATGGCGATGGTGACGCCTCCGTCGCGGCAAAAAAAGTCGTTAATCCTGAAGAAATCAAGCATTATCGGAGGAGTCAATCGGAGAAAATCGCCGTCGCGCAGCAGGAGAATCCGCATCGTGAACTCCGCCGATCGGAGACGGAGAAATGCAAGAAACTCGTCCGATTCAGCGAGGGAGCGGCGAAAAGCTCGTATCCGGAGGACAGGATGAGCAACGAGGAGTTCCGGCAGACGGTGGAGGCGTTCATCGCGCGGCAGCAGAGGTTGCGAAGGGAGGAAGAACACTGTGTA

Protein sequence

FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIEYRTKQIDGDGDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSETEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV
Homology
BLAST of MS020548 vs. NCBI nr
Match: XP_022146107.1 (uncharacterized protein LOC111015401 [Momordica charantia])

HSP 1 Score: 411.4 bits (1056), Expect = 5.1e-111
Identity = 221/227 (97.36%), Postives = 221/227 (97.36%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV
Sbjct: 6   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 125

Query: 121 YRTKQIDGDGDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSETEKC 180
           YRTKQI    DGDGDASVAAKKVVNPEEIK YRRSQSEKIAVAQQENP RELRRSETEKC
Sbjct: 126 YRTKQI----DGDGDASVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETEKC 185

Query: 181 KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228
           KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV
Sbjct: 186 KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228

BLAST of MS020548 vs. NCBI nr
Match: KAG7010922.1 (hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.7 bits (883), Expect = 5.9e-91
Identity = 184/228 (80.70%), Postives = 202/228 (88.60%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYD+RA K NAILK+RQ+RKIANLFRFIELCL+LV+I+RFSS+LPSA KNSGEYFRCLSV
Sbjct: 6   FYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYFRCLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYE+F++NSEKNQKTR AEIE
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTRRAEIE 125

Query: 121 YRTKQIDGD-GDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSETEK 180
           YR KQID   G+G+ D S+A KK+    EIKHY+RS+SEKI V Q+ENPHRELRRSETEK
Sbjct: 126 YRVKQIDDSRGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHRELRRSETEK 185

Query: 181 CKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228
           CKK+VR SE       PEDRMSNEEFRQTVEAFIARQQRLRREEE CV
Sbjct: 186 CKKIVRLSEETKNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 230

BLAST of MS020548 vs. NCBI nr
Match: XP_022986604.1 (uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima])

HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90
Identity = 184/230 (80.00%), Postives = 204/230 (88.70%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYD+RA K NAILK+RQ+RKIANLFRFIELCL+LV+++RFSS+LPSA KNSGEYFRCLSV
Sbjct: 6   FYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYFRCLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYE+F++NSEKNQKTR AEIE
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTRRAEIE 125

Query: 121 YRTKQID---GDGDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSET 180
           YR KQID   G+G+G+ D S+A KK+    EIKHY+RS+SEKI V Q+ENPHRELRRSET
Sbjct: 126 YRVKQIDDSRGNGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHRELRRSET 185

Query: 181 EKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228
           EK KK+VR SE     S PEDRMSNEEFRQTVEAFIARQQRLRREEE CV
Sbjct: 186 EKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 232

BLAST of MS020548 vs. NCBI nr
Match: XP_038900483.1 (uncharacterized protein LOC120087694 [Benincasa hispida])

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-89
Identity = 184/226 (81.42%), Postives = 200/226 (88.50%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYDIRAEKANAILK+RQLRKIANLFRFIELCL+LV+ISRFSSHLP+A KNS EYFR LSV
Sbjct: 6   FYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPTAFKNSSEYFRYLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYE+FI+NSEKNQKTR AEIE
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFIQNSEKNQKTRRAEIE 125

Query: 121 YRTKQIDGDGDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSETEKC 180
           YR KQID   D  GD+S++ KK+VNP+EIK Y+RS+SEK+ V Q+EN  RELRRSETEK 
Sbjct: 126 YRIKQID---DSRGDSSISVKKIVNPQEIKRYQRSKSEKMEVVQRENLDRELRRSETEKF 185

Query: 181 KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHC 227
           KK+V   E    SSYPED MSNEEFRQTVEAFIARQQRLRREEE C
Sbjct: 186 KKIVGLREDRRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFC 228

BLAST of MS020548 vs. NCBI nr
Match: XP_022948013.1 (uncharacterized protein LOC111451717 [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 7.5e-86
Identity = 180/241 (74.69%), Postives = 198/241 (82.16%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           F DIR EK NAILK+RQLRKIANLFRFIELCL+LV+IS+ S HLPSA KNSGEYFRCLS+
Sbjct: 6   FCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYFRCLSM 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFS  D SKKNSVADLYE+FI+NSEKNQ+TR AEI+
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTRRAEIK 125

Query: 121 YRTKQID-----GDG----------DGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQ 180
           YR KQ D     GD            G G+AS+A KK+ NPEEIKHYRRSQSEKIAV Q+
Sbjct: 126 YRIKQTDSGNVHGDASIKYRIKQIDSGSGNASIAIKKIGNPEEIKHYRRSQSEKIAVVQR 185

Query: 181 ENPHRELRRSETEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEH 227
           ENPH +L RSETEK KK+VR SEG  + SYPED MSNEEF++ VEAFIARQQRLRREEE 
Sbjct: 186 ENPHSKLSRSETEKSKKIVRLSEGTEQISYPEDGMSNEEFQEMVEAFIARQQRLRREEEF 245

BLAST of MS020548 vs. ExPASy TrEMBL
Match: A0A6J1CYN5 (uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015401 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.5e-111
Identity = 221/227 (97.36%), Postives = 221/227 (97.36%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV
Sbjct: 6   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 125

Query: 121 YRTKQIDGDGDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSETEKC 180
           YRTKQI    DGDGDASVAAKKVVNPEEIK YRRSQSEKIAVAQQENP RELRRSETEKC
Sbjct: 126 YRTKQI----DGDGDASVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETEKC 185

Query: 181 KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228
           KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV
Sbjct: 186 KKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228

BLAST of MS020548 vs. ExPASy TrEMBL
Match: A0A6J1JGH7 (uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.4e-91
Identity = 184/230 (80.00%), Postives = 204/230 (88.70%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYD+RA K NAILK+RQ+RKIANLFRFIELCL+LV+++RFSS+LPSA KNSGEYFRCLSV
Sbjct: 6   FYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYFRCLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYE+F++NSEKNQKTR AEIE
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTRRAEIE 125

Query: 121 YRTKQID---GDGDGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSET 180
           YR KQID   G+G+G+ D S+A KK+    EIKHY+RS+SEKI V Q+ENPHRELRRSET
Sbjct: 126 YRVKQIDDSRGNGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHRELRRSET 185

Query: 181 EKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228
           EK KK+VR SE     S PEDRMSNEEFRQTVEAFIARQQRLRREEE CV
Sbjct: 186 EKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 232

BLAST of MS020548 vs. ExPASy TrEMBL
Match: A0A6J1G874 (uncharacterized protein LOC111451717 OS=Cucurbita moschata OX=3662 GN=LOC111451717 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.6e-86
Identity = 180/241 (74.69%), Postives = 198/241 (82.16%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           F DIR EK NAILK+RQLRKIANLFRFIELCL+LV+IS+ S HLPSA KNSGEYFRCLS+
Sbjct: 6   FCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYFRCLSM 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFS  D SKKNSVADLYE+FI+NSEKNQ+TR AEI+
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTRRAEIK 125

Query: 121 YRTKQID-----GDG----------DGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQ 180
           YR KQ D     GD            G G+AS+A KK+ NPEEIKHYRRSQSEKIAV Q+
Sbjct: 126 YRIKQTDSGNVHGDASIKYRIKQIDSGSGNASIAIKKIGNPEEIKHYRRSQSEKIAVVQR 185

Query: 181 ENPHRELRRSETEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEH 227
           ENPH +L RSETEK KK+VR SEG  + SYPED MSNEEF++ VEAFIARQQRLRREEE 
Sbjct: 186 ENPHSKLSRSETEKSKKIVRLSEGTEQISYPEDGMSNEEFQEMVEAFIARQQRLRREEEF 245

BLAST of MS020548 vs. ExPASy TrEMBL
Match: A0A6J1L691 (uncharacterized protein LOC111499556 OS=Cucurbita maxima OX=3661 GN=LOC111499556 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.9e-85
Identity = 177/241 (73.44%), Postives = 196/241 (81.33%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           F DIR E+ N ILK+RQLRKIANLFRFIELCL+LV+IS+ S HLPSA KN GEYFRCLS+
Sbjct: 6   FCDIRTERMNTILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNFGEYFRCLSM 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIE 120
           TLISPRFVFLIGNAIVITLFAKSGQFS  D SKKNSVADLYE+FI+NSEKNQ+TR AEI+
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTRRAEIK 125

Query: 121 YRTKQID-----GDG----------DGDGDASVAAKKVVNPEEIKHYRRSQSEKIAVAQQ 180
           YR KQID     GD            G G+AS+  KK+ NPEEIKHYRRSQSEKIAV Q+
Sbjct: 126 YRIKQIDSGNVHGDASIKYRIQQIDSGSGNASIVIKKIGNPEEIKHYRRSQSEKIAVVQR 185

Query: 181 ENPHRELRRSETEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEH 227
           ENPH +L RSETEK KK+VR SEG  + SYPED MSNEEF++ VEAFIARQQRLRREEE 
Sbjct: 186 ENPHSKLSRSETEKSKKIVRLSEGTEQISYPEDGMSNEEFQEMVEAFIARQQRLRREEEF 245

BLAST of MS020548 vs. ExPASy TrEMBL
Match: A0A5D3DZ88 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00270 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.8e-77
Identity = 170/227 (74.89%), Postives = 189/227 (83.26%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           FYDIR EKANAILK+RQ RKIANLFRFIELCL+L++ISRFSSHLP+A+KN  EYFR LSV
Sbjct: 6   FYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYFRYLSV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEK-NQKTRHAEI 120
           TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYE+FIKNSEK NQK+   EI
Sbjct: 66  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKSPRTEI 125

Query: 121 EYRTKQIDGDGDGDGDASVAAKKVV-NPEEIKHYRRSQSEKIAVAQQENPHRE-LRRSET 180
            Y+ K ID   +  G ASV+ +KVV NPEE K Y+R +SEK+ V  +E   RE L+RSET
Sbjct: 126 NYQIKHID---ESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRSET 185

Query: 181 EKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEE 225
           EKCKK+V   EG   SSYPED MSNEEFRQTVEAFIARQQRL+REEE
Sbjct: 186 EKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEE 229

BLAST of MS020548 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-27
Identity = 91/236 (38.56%), Postives = 138/236 (58.47%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           F  ++ EK+  IL  + +R   +LFR  EL L+++LIS+ S   PS VK SG+ F+  +V
Sbjct: 6   FQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLS--FPS-VKISGDIFKEAAV 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAK-DPSKKNSVA---DLYEDFIKNSEKNQKTRH 120
            L+SPRFVF IGNAIVITL AKSG++S+  +PSK  + A   DLY++F+  SEK +   +
Sbjct: 66  FLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKKKPVVY 125

Query: 121 AEIEYRTKQIDGDGDGDGDASVAAKKVVNPEEIKHYRRSQSEK----IAVAQQENPHREL 180
           A    +T+Q+     G        K+V        + RSQS K    +   +  N  + +
Sbjct: 126 AT---KTEQLKKPSGG--------KRV-------SFGRSQSHKAFEAVKPLESTNGEKNM 185

Query: 181 RRSETEKCKKLVRFSEG-AAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228
           +R  +EK  ++    +    +   PED MSNE+FR  +EAFIARQ+R++++EEH +
Sbjct: 186 KRYVSEKHMRVCDSDKKVVVRVKKPEDGMSNEQFRTKIEAFIARQKRIQKDEEHLI 220

BLAST of MS020548 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 81/245 (33.06%), Postives = 133/245 (54.29%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           F +++AEKA A+ +  +  +I   FR  E+C+ L+ I    S LP  V+ SG + R ++ 
Sbjct: 6   FDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFLRRIAA 65

Query: 61  TLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAE-- 120
            + +P FVFL+GN+IV+ L  KS   +    +  ++  ++Y+ F+++ E   K    +  
Sbjct: 66  VISTPLFVFLLGNSIVVVLLTKSSDQTT--TAVASAETEIYQAFVRSVENRSKPSDEDLT 125

Query: 121 --IEYRTKQIDGDGDGDGDASVAAKKVVNPEEI--------KHYRRSQSEKIAVAQQEN- 180
             I Y  KQ+    D D + ++   + +   EI        K Y RS+S+ ++  Q  N 
Sbjct: 126 EGIVYDDKQVIVT-DLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSD-VSGKQSSNM 185

Query: 181 ----PHRELRRSETEK-CKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRRE 228
                 R L+RSETEK CK+     +   + +YPED +SNEEF++T+EAFIA+Q+  RR+
Sbjct: 186 VMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRMFRRQ 245

BLAST of MS020548 vs. TAIR 10
Match: AT2G21560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 67/269 (24.91%), Postives = 126/269 (46.84%), Query Frame = 0

Query: 5   RAEKANAILKHRQLRKIANLF-RFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSVTLI 64
           +  K   ++K  + + + +LF R IE+ LV++ +++    L   V++SG     L+  LI
Sbjct: 10  KPRKMKVVVKKSRAQVLLDLFYRVIEITLVIITLAKLCYQLVITVESSG-----LASFLI 69

Query: 65  SPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIEYRT 124
           +    F++GN IVIT+  K G F+ ++   + +  D Y++F++ S + ++  H ++  R 
Sbjct: 70  NRHLAFVLGNTIVITIVVKCGFFANQETDARRNRNDFYDEFVRESSRGERRLHTDVICRE 129

Query: 125 KQIDGDGDGDGDASV-AAKKVVNPEEIKHYRRSQSEKIAVAQQENPHRELRRSE------ 184
           KQ + +           AK+ +  +     + S SE  A    E    +L++SE      
Sbjct: 130 KQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQSTEEKREKLKKSEISGRQS 189

Query: 185 -----------TEKCKKLVRFS----------------EGAAKSS----------YPEDR 228
                       +K +++V  +                EG+ KSS           P DR
Sbjct: 190 SGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEGSKKSSCVQLKRSETERPADR 249

BLAST of MS020548 vs. TAIR 10
Match: AT4G39190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae - 12; Bacteria - 497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses - 22; Other Eukaryotes - 3119 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 69/250 (27.60%), Postives = 106/250 (42.40%), Query Frame = 0

Query: 25  FRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSVTLISPRFVFLIGNAIVITLFAKSG 84
           FR IE+ +VLV +++ S  L    ++S       SV L +    F+IGNAIVI L AKSG
Sbjct: 32  FRAIEIVVVLVTLAKLSYELVVTFEDSS----VASVILANRSLAFVIGNAIVIALIAKSG 91

Query: 85  QFSAKDPSKKNSVADLYEDFIKNSEKNQKTRHAEIEYRTKQIDGDGDGDGD--------- 144
               ++   K    DLYEDF+  S +       E+    KQ + + +             
Sbjct: 92  ILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKEN 151

Query: 145 ------------ASVAAKKVVNPEEIKHYRRSQSEKIA--------VAQQENPHREL--- 204
                        SV  KK       K  ++S+ EK+           Q E  H+++   
Sbjct: 152 EEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMT 211

Query: 205 ---------------RRSETEKCKKLVRFSEGAAKSSYPE---DRM-SNEEFRQTVEAFI 224
                          +RS++E  K L + S G  K S  +   +R  S++E R  +E+FI
Sbjct: 212 IEKQNLTEKRQIQSYQRSKSENLKVLEKSSCGRLKRSETDASAERFDSDDELRYKIESFI 271

BLAST of MS020548 vs. TAIR 10
Match: AT1G75360.1 (unknown protein; Has 74 Blast hits to 71 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.6e-04
Identity = 58/266 (21.80%), Postives = 112/266 (42.11%), Query Frame = 0

Query: 1   FYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYFRCLSV 60
           F+ + AEKA A+ ++   R    + R + +  +  L   +   +   ++  G++      
Sbjct: 7   FHGVEAEKAEAMRRYNNRRSFRGILRLVGVAFLCYL---WFPTVAIILQTVGDWIYWTGA 66

Query: 61  TLISPR-FVFLIGNAIVITLFAKSGQFSAKDPSKK-NSVADLYEDFIKNSE---KNQKTR 120
            LI+ R  VF   N IV  +F  SG+ + +  S    +  DLY+ +  +      N    
Sbjct: 67  VLITDRSVVFFFANLIVGLIFFLSGESNNESSSSNVETEPDLYDQYTSSFSTVIANASAA 126

Query: 121 HAEIEYRTKQIDGDGDGDGDASVAAKKVVNPEEIK------HYRRSQSEKIAVAQQ---- 180
             +     KQI    + + D +V  K++    + +       Y R++SEK+    +    
Sbjct: 127 KVDDNDSNKQIVPTFNAEVDEAVKTKRISRRTKSEICRPAMEYERTESEKVVEDDESEKQ 186

Query: 181 ---------------ENPHREL-------RRSETEKCKKLVR----FSEGAAKSSYPEDR 226
                          +  +RE+       RR+++E  K+++R         +    P DR
Sbjct: 187 IVPAYFPEDDEEVVVDEANREMVTTPGIYRRTKSETKKEIIRPVIEIRRTESAKEVPIDR 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146107.15.1e-11197.36uncharacterized protein LOC111015401 [Momordica charantia][more]
KAG7010922.15.9e-9180.70hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022986604.11.3e-9080.00uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima][more]
XP_038900483.11.5e-8981.42uncharacterized protein LOC120087694 [Benincasa hispida][more]
XP_022948013.17.5e-8674.69uncharacterized protein LOC111451717 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CYN52.5e-11197.36uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1JGH76.4e-9180.00uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G8743.6e-8674.69uncharacterized protein LOC111451717 OS=Cucurbita moschata OX=3662 GN=LOC1114517... [more]
A0A6J1L6918.9e-8573.44uncharacterized protein LOC111499556 OS=Cucurbita maxima OX=3661 GN=LOC111499556... [more]
A0A5D3DZ881.8e-7774.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT4G34560.12.9e-2738.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G66440.11.6e-2233.06unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G21560.14.5e-1224.91unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G39190.11.9e-0727.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G75360.12.6e-0421.80unknown protein; Has 74 Blast hits to 71 proteins in 15 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availablePANTHERPTHR33640TRANSMEMBRANE PROTEINcoord: 3..225
NoneNo IPR availablePANTHERPTHR33640:SF8TRANSMEMBRANE PROTEINcoord: 3..225

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020548.1MS020548.1mRNA