MS020542 (gene) Bitter gourd (TR) v1

Overview


Name	MS020542
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein RER1
Location	scaffold375: 1040676 .. 1042432 (-)
RNA-Seq Expression	MS020542
Synteny	MS020542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGTATAGGAGGTGATACGGCCTCAGCAGCAGCACCCTTGAACCAGTGGCAACATGACATTTCACGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTGTCTACAGATGGATTGGAACCATTTTTGTGTTGGCAATTTATGCATTGAGGGTCTACTATGTGCAGGGGTTCTACATTGTTTCATATGGTCTGGGTATCTATATACTCAATCTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGACCTTTGCTGCCAACAAAAGGTTCAGATGAATTCAAGCCATTCATTCGACGACTTCCAGAATTTAAGTTCTGGTAACTATGGAATTTCCTTCATGAGCAAGCATTATTTTCTTGTTTATATTTGGCTGGTAAACTTTGAAGTTTGATTTTCTGTTGTTTCATCAATACATATTCGATCTGCAGTATTCTGTTTATCTATTATGTCAAGTTTGGTACTCTTAACTGGTAGTTTGGTACTCTTAATTGGTTGGCTTCAATGGAGAAAAAAAAGGCATAGGCAGTGATGAGGGAAACTGACAGTGAGGTGGGCAGAGTTTGGTTAAGTTGTGAAGATATCTGTCTACAAGTATTCTTTTGTGCCTATCTCTTGTTCATTTTAATTATTACTCATTGGTGCTTGTTAATGGGCTTTGCTCATTATATATATGGTAATTTTGACATTCTGAGTCCATACTGTCATGCTTATTATTTTGCACTGTTGCACCTGCCTTGAGCTTATATAGTTGATATCTCAAGAATTAAAATGTAGTGGAGCAGGAAGGCATTTTCCTGTGGCTTGGTAATTTAAACAAGACAGGGAAAGATACAATCATCATATGGAAAAATATGCTTTTATATTTGTCAGTTCTCATTGAAATTTTGATGGTTTTAGAAGAACCTGGTCTCATTGTACCTTATTGTGTCGTGATGGTTAATGACTTCCTTCTTACCTTTTATCCTTTTTCTCTTCAAGTTTCTATTCCTTTTTTTTTCTTTCTACTATTTTCTGTGTGGAGAAGTTCCTTGACATTATAGAAGTCACTCAGAATGATAATGGTTCGAAAATGTTAACCTCTTTGTTGGGTAACGTAATAATTTGGGCACTCTCAAATATTGCCCGGAGGCTTAGTGAAGTAGACGTGTTTATTAGATAAATGCTAGTCTACTCTGCACCTTGAGGGAGAGGCCCTAAGCTTCTTTCAGTTTACTTATTAAAAGAAAGGCTTCCCTTGCTCCCTGGCATTTTCTCACTTTCTTATATTAATTTGTTCGGGAGAGCTCTGCCATCCCCTCGAGATCATGCTAGGGTGTGAAACTTGGATAATTGAATTTGAACGCTTCAATTGATTATCCATTTGGGTTCTTTGGTGTTGGTCTTCTTTTCCACCCCTGTACCAACTTTCCCTTTTGTGGAAGTAAATAAATTTTACTTTATTTCTCATAAAAATGAAAATTTGTGTTTGCAGGTACTCTTTTACAAAGGCGTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATATTTGACGTTCCTGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGGTGACTTACCAAATACTTTTAATACATTATGCAGCTGTTTCTTTCTCCTCCCTTGACCTTTCTCGAGTTGCT

mRNA sequence

ATGGACGGTATAGGAGGTGATACGGCCTCAGCAGCAGCACCCTTGAACCAGTGGCAACATGACATTTCACGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTGTCTACAGATGGATTGGAACCATTTTTGTGTTGGCAATTTATGCATTGAGGGTCTACTATGTGCAGGGGTTCTACATTGTTTCATATGGTCTGGGTATCTATATACTCAATCTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGACCTTTGCTGCCAACAAAAGGTTCAGATGAATTCAAGCCATTCATTCGACGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCGTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATATTTGACGTTCCTGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGGTGACTTACCAAATACTTTTAATACATTATGCAGCTGTTTCTTTCTCCTCCCTTGACCTTTCTCGAGTTGCT

Coding sequence (CDS)

ATGGACGGTATAGGAGGTGATACGGCCTCAGCAGCAGCACCCTTGAACCAGTGGCAACATGACATTTCACGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTGTCTACAGATGGATTGGAACCATTTTTGTGTTGGCAATTTATGCATTGAGGGTCTACTATGTGCAGGGGTTCTACATTGTTTCATATGGTCTGGGTATCTATATACTCAATCTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGACCTTTGCTGCCAACAAAAGGTTCAGATGAATTCAAGCCATTCATTCGACGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCGTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATATTTGACGTTCCTGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGGTGACTTACCAAATACTTTTAATACATTATGCAGCTGTTTCTTTCTCCTCCCTTGACCTTTCTCGAGTTGCT

Protein sequence

MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGFYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQVTYQILLIHYAAVSFSSLDLSRVA

Homology

[Close]

BLAST of MS020542 vs. NCBI nr
Match: XP_022146273.1 (protein RER1A-like [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG
Sbjct: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. NCBI nr
Match: XP_023533159.1 (protein RER1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 3.3e-93
Identity = 172/177 (97.18%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHDISRLYQYYLDKTTPHAVYRWIGT+FV+AIYALRVYY+QG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. NCBI nr
Match: XP_022943556.1 (protein RER1A-like [Cucurbita moschata] >KAG7010926.1 Protein RER1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.5 bits (898), Expect = 9.5e-93
Identity = 171/177 (96.61%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHD+SRLYQYYLDKTTPHAVYRWIGT+FVLAIYALRV+YVQG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. NCBI nr
Match: XP_023007341.1 (protein RER1A-like [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 9.5e-93
Identity = 171/177 (96.61%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHDISRLYQYYLDKTTPH VYRWIGT+FV+AIYALRVYY+QG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHTVYRWIGTLFVVAIYALRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. NCBI nr
Match: XP_022947776.1 (protein RER1A-like [Cucurbita moschata])

HSP 1 Score: 350.5 bits (898), Expect = 9.5e-93
Identity = 171/177 (96.61%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHDISRLYQYYLDKTTPHAVYRWIGT+FV+AIYALRV+Y+QG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.0e-78
Identity = 143/178 (80.34%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MD  GGD+ S A P+ Q  H+  R+YQ+YLDKTTPHA YRWIGT+ V  IY LRVYY+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEM-EVSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFS GKQ
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQ 178

[Close]

BLAST of MS020542 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2)

HSP 1 Score: 288.1 bits (736), Expect = 7.6e-77
Identity = 137/177 (77.40%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           M+G GGD+ S A P+ +  H+  R+YQYYLDKTTPH+  RWIGT+    IY LRVY + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KYIPFS+GKQ
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQ 177

[Close]

BLAST of MS020542 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.7e-56
Identity = 102/171 (59.65%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 7   DTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGFYIVSY 66
           D++S A  +N+  H  S+  Q+ LDKT PH +YRWI  + V+ IY +RVY+V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of MS020542 vs. ExPASy Swiss-Prot
Match: Q9ZPV7 (Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 9.0e-54
Identity = 103/175 (58.86%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 12  AAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGFYIVSYGLGIY 71
           A+PL +W+ + S+ +Q YLD++ P+ V RW+ T+    IY  RVY V G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQVTYQILLIH 187
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K V     L++
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRKPVKLLKFLVN 190

[Close]

BLAST of MS020542 vs. ExPASy Swiss-Prot
Match: A5PJ65 (Protein RER1 OS=Bos taurus OX=9913 GN=RER1 PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 3.3e-48
Identity = 98/182 (53.85%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 2   DGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGF 61
           D +G       + + ++   + ++YQ +LDK+TPH   RW+ T+ +  IY +RVY +QG+
Sbjct: 5   DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGW 64

Query: 62  YIVSYGLGIYILNLLIGFLSPLVDPEM--EVSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 121
           YIV+Y LGIY LNL I FLSP VDP +  +  DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65  YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124

Query: 122 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQVT 181
            TK   +A V TFF  F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKY+YIPF+ GK+ T
Sbjct: 125 ATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR-T 184

[Close]

BLAST of MS020542 vs. ExPASy TrEMBL
Match: A0A6J1CY56 (Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111015523 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.9e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG
Sbjct: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. ExPASy TrEMBL
Match: A0A6J1L096 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111499866 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93
Identity = 171/177 (96.61%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHDISRLYQYYLDKTTPH VYRWIGT+FV+AIYALRVYY+QG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHTVYRWIGTLFVVAIYALRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. ExPASy TrEMBL
Match: A0A6J1G7E1 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111451535 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93
Identity = 171/177 (96.61%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHDISRLYQYYLDKTTPHAVYRWIGT+FV+AIYALRV+Y+QG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. ExPASy TrEMBL
Match: A0A6J1FS15 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111448292 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93
Identity = 171/177 (96.61%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIGG+TASAAAPL+QWQHD+SRLYQYYLDKTTPHAVYRWIGT+FVLAIYALRV+YVQG
Sbjct: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. ExPASy TrEMBL
Match: A0A6J1JGI9 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111484302 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.7e-92
Identity = 169/177 (95.48%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MDGIG +TASAAAPL+QWQHD+SRLYQYYLDKTTPHAVYRWIGT+FVLAIYALRV+YVQG
Sbjct: 1   MDGIGSETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFC AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQ
Sbjct: 121 TKAFCTAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQ 177

[Close]

BLAST of MS020542 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein )

HSP 1 Score: 292.4 bits (747), Expect = 2.9e-79
Identity = 143/178 (80.34%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           MD  GGD+ S A P+ Q  H+  R+YQ+YLDKTTPHA YRWIGT+ V  IY LRVYY+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEM-EVSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFS GKQ
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQ 178

[Close]

BLAST of MS020542 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B )

HSP 1 Score: 288.1 bits (736), Expect = 5.4e-78
Identity = 137/177 (77.40%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MDGIGGDTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQG 60
           M+G GGD+ S A P+ +  H+  R+YQYYLDKTTPH+  RWIGT+    IY LRVY + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KYIPFS+GKQ
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQ 177

[Close]

BLAST of MS020542 vs. TAIR 10
Match: AT2G23310.1 (Rer1 family protein )

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-57
Identity = 102/171 (59.65%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 7   DTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGFYIVSY 66
           D++S A  +N+  H  S+  Q+ LDKT PH +YRWI  + V+ IY +RVY+V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of MS020542 vs. TAIR 10
Match: AT2G23310.2 (Rer1 family protein )

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-57
Identity = 102/171 (59.65%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 7   DTASAAAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGFYIVSY 66
           D++S A  +N+  H  S+  Q+ LDKT PH +YRWI  + V+ IY +RVY+V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQ 178
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of MS020542 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.4e-55
Identity = 103/175 (58.86%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 12  AAPLNQWQHDISRLYQYYLDKTTPHAVYRWIGTIFVLAIYALRVYYVQGFYIVSYGLGIY 71
           A+PL +W+ + S+ +Q YLD++ P+ V RW+ T+    IY  RVY V G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQVTYQILLIH 187
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K V     L++
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRKPVKLLKFLVN 190

The following BLAST results are available for this feature:

BLAST of MS020542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146273.1	6.0e-95	100.00	protein RER1A-like [Momordica charantia]	[more]
XP_023533159.1	3.3e-93	97.18	protein RER1A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943556.1	9.5e-93	96.61	protein RER1A-like [Cucurbita moschata] >KAG7010926.1 Protein RER1B, partial [Cu...	[more]
XP_023007341.1	9.5e-93	96.61	protein RER1A-like [Cucurbita maxima]	[more]
XP_022947776.1	9.5e-93	96.61	protein RER1A-like [Cucurbita moschata]	[more]

BLAST of MS020542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48670	4.0e-78	80.34	Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1	[more]
O48671	7.6e-77	77.40	Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2	[more]
Q9ZWI7	5.7e-56	59.65	Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1	[more]
Q9ZPV7	9.0e-54	58.86	Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2	[more]
A5PJ65	3.3e-48	53.85	Protein RER1 OS=Bos taurus OX=9913 GN=RER1 PE=2 SV=2	[more]

BLAST of MS020542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY56	2.9e-95	100.00	Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111015523 PE=3 SV=1	[more]
A0A6J1L096	4.6e-93	96.61	Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111499866 PE=3 SV=1	[more]
A0A6J1G7E1	4.6e-93	96.61	Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111451535 PE=3 SV=1	[more]
A0A6J1FS15	4.6e-93	96.61	Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111448292 PE=3 SV=1	[more]
A0A6J1JGI9	8.7e-92	95.48	Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111484302 PE=3 SV=1	[more]

BLAST of MS020542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39220.1	2.9e-79	80.34	Rer1 family protein	[more]
AT2G21600.1	5.4e-78	77.40	endoplasmatic reticulum retrieval protein 1B	[more]
AT2G23310.1	4.0e-57	59.65	Rer1 family protein	[more]
AT2G23310.2	4.0e-57	59.65	Rer1 family protein	[more]
AT2G18240.1	6.4e-55	58.86	Rer1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 18..177 e-value: 3.7E-73 score: 244.9
IPR004932	Retrieval of early ER protein Rer1	PIRSF	PIRSF016013	AtER_Rer1p	coord: 1..184 e-value: 2.4E-83 score: 276.5
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 1..178
None	No IPR available	PANTHER	PTHR10743:SF17	PROTEIN RER1A	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020542.1	MS020542.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane