MS020522 (gene) Bitter gourd (TR) v1

Overview


Name	MS020522
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CASP-like protein
Location	scaffold375: 834644 .. 836242 (-)
RNA-Seq Expression	MS020522
Synteny	MS020522

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGTTCCTGGATCGGTGGGCACCAGCGCCAGCTTCTCCCTCAGATTGGGGCAGACCGTATTCTCCACCGCCTCCCTTCTTTTCATGTCCTTGGGTGTTGAATTCTACAGCTACACCGCTTTCTGGTGACGCTCTTTTCCATCTCTCTCTCTCTCTGATTCTTCTTGATCTGGATGATTTTGATCCCATTTCTGTGGGTCTTTTGTTGGATGTTTGTTTTGGATCCCCCAAAAGATTGAGTAATTGTATCTTTCGAAATCTGAAATTAAGTGTTGATGGGGATTTGTGGTTATGTTCTTGTGATGGATGAGGGGAATTTGATCTTTATTCCTTTTGTGGCCAAATTGGTGTTCAACTTGGAGCAGTTGGGGATCTGTGAAAGCTTTTGAATGTCATTTTCAATAAAACATGTTTCGTTAATGATAGCATACACACATACTAGTGGATTGATTATTGGTTAAATTATATATTTCGTTTTGGAACTTTGAGCCTATGGGTTTATTTAGTTCTTTATTGATTAAGTTATATATCAATTTGATACATGTTTTAGTCTATATTTGTCGGATCATGTCAATTCAACCAAAACTAATCGAATGCATCGGCGTAGCATGCATTGATCGAGTATCGATTGAGTAGAAGTATAATTCAAATTTAGGTAGGTGATTGAAAACTTTTTAAAATCTGACTAAAATACATGTCATATCGGCGACTGCACCGTGGTCCGAGTAGAAGTATGAATCAGATTTAGGAAGGTAATTGAAAACGCTTTGTAATCTAGTGACTAGATATACAAAATGTTTAAAGTTTAGGCACTACGTTTATAATTTAACATTGTTTGATTGTCATGTTTGCCAGAATGTTTTTTTGTTTCTCTTTCTCTCCAACCTTTTCCTCTATTCGGTATGAGTTTTATGTCTCATTCACTCAGTACAATTGAGATTTATCTATCAAAACGAGCCGAGCGCATCGAAATAAAATCGATAAAGTTCACAAAATAACTCTGCACAAATATCTATCAAGTATCAACTTAGCATGGCAATCAAGTTGGCTGTTAAACACGTTGTGCACGATGCGAAATGATTCGATATTGCCCGTCTATTTGTTTATCATACTGTTTATCTTTTGGGTATCCTAGCCTTTTGCTTTTGATGATGACCTTCCCATTGTTGGATGCCATTTGCAGCTACCTTGTGACAGTGATGGGTTTGGTCATACCCTGGAGCTTCACCTTGGCGATGGTTGATGGCTACTCTGTTCTTGTAAAATGTCCTCTTCGACAGCCCGGAATACTCGTGATCATCGTCATCGGAGATTGGGTAAGTACACCTCTCGAACTACATTAAACTTTCGGATTTAGGATGCCCGAGTTTTTGTTTTGAAAAACGTTTGCTTGGAGAACAGGTCCTGTCACTCCTCACACTAGCTGCTGCTTGCTCGACTGCGAGTGTCGTCGATCTTCTTCTTCACTCGAACAGTTCGTATTGCCCGTTAAAGCTGTGCAGAAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTTTGCTTCTTCCCTTTTAAATCTATGGTTACTTCCATCCTTA

mRNA sequence

ATGGAAGAGGTTCCTGGATCGGTGGGCACCAGCGCCAGCTTCTCCCTCAGATTGGGGCAGACCGTATTCTCCACCGCCTCCCTTCTTTTCATGTCCTTGGGTGTTGAATTCTACAGCTACACCGCTTTCTGCTACCTTGTGACAGTGATGGGTTTGGTCATACCCTGGAGCTTCACCTTGGCGATGGTTGATGGCTACTCTGTTCTTGTAAAATGTCCTCTTCGACAGCCCGGAATACTCGTGATCATCGTCATCGGAGATTGGGTCCTGTCACTCCTCACACTAGCTGCTGCTTGCTCGACTGCGAGTGTCGTCGATCTTCTTCTTCACTCGAACAGTTCGTATTGCCCGTTAAAGCTGTGCAGAAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTTTGCTTCTTCCCTTTTAAATCTATGGTTACTTCCATCCTTA

Coding sequence (CDS)

ATGGAAGAGGTTCCTGGATCGGTGGGCACCAGCGCCAGCTTCTCCCTCAGATTGGGGCAGACCGTATTCTCCACCGCCTCCCTTCTTTTCATGTCCTTGGGTGTTGAATTCTACAGCTACACCGCTTTCTGCTACCTTGTGACAGTGATGGGTTTGGTCATACCCTGGAGCTTCACCTTGGCGATGGTTGATGGCTACTCTGTTCTTGTAAAATGTCCTCTTCGACAGCCCGGAATACTCGTGATCATCGTCATCGGAGATTGGGTCCTGTCACTCCTCACACTAGCTGCTGCTTGCTCGACTGCGAGTGTCGTCGATCTTCTTCTTCACTCGAACAGTTCGTATTGCCCGTTAAAGCTGTGCAGAAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTTTGCTTCTTCCCTTTTAAATCTATGGTTACTTCCATCCTTA

Protein sequence

MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTLAMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKLCRRYQISAAMAFLSWFLSFASSLLNLWLLPSL

Homology

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BLAST of MS020522 vs. NCBI nr
Match: XP_022148516.1 (CASP-like protein 5C1 [Momordica charantia])

HSP 1 Score: 287.0 bits (733), Expect = 9.8e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL
Sbjct: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL
Sbjct: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 152

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BLAST of MS020522 vs. NCBI nr
Match: XP_022947184.1 (CASP-like protein 5C1 [Cucurbita moschata] >XP_023533781.1 CASP-like protein 5C1 [Cucurbita pepo subsp. pepo] >KAG6605092.1 CASP-like protein 5C1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.1 bits (684), Expect = 4.7e-68
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT  SFSLRLGQTVFS+ASLLFMSLG+EFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDVVPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL II++GDWVLSLLTLAAACSTASVVD+LLHS+SSYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLHSDSSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAFLSWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFLSWFLSFASSLFNLWLLPSL 152

[Close]

BLAST of MS020522 vs. NCBI nr
Match: XP_038901622.1 (CASP-like protein 5C1 [Benincasa hispida])

HSP 1 Score: 268.1 bits (684), Expect = 4.7e-68
Identity = 139/152 (91.45%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT ASFSLRLGQTVFS+ASLLFMS+GVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDAVPGSVGTGASFSLRLGQTVFSSASLLFMSVGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL IIV+GDWVLSLLTLAAACSTASVVD+LLHS+SSYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHSDSSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAF SWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFFSWFLSFASSLFNLWLLPSL 152

[Close]

BLAST of MS020522 vs. NCBI nr
Match: XP_004145336.1 (CASP-like protein 5C1 [Cucumis sativus] >KGN61776.1 hypothetical protein Csa_006746 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67
Identity = 138/152 (90.79%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT ASFSLRLGQT FS+ASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDAVPGSVGTGASFSLRLGQTAFSSASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL IIV+GDWVLSLLTLAAACSTASVVD+LLH +SSYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHLDSSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAF SWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFFSWFLSFASSLFNLWLLPSL 152

[Close]

BLAST of MS020522 vs. NCBI nr
Match: XP_008459268.1 (PREDICTED: CASP-like protein 5C1 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67
Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT ASFSLRLGQT FS+ASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDAVPGSVGTGASFSLRLGQTAFSSASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL IIV+GDWVLSLLTLAAACSTASVVD+LLH + SYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHLDGSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAF SWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFFSWFLSFASSLFNLWLLPSL 152

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BLAST of MS020522 vs. ExPASy Swiss-Prot
Match: Q10EJ2 (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-49
Identity = 99/146 (67.81%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 6   GSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTLAMVDG 65
           G+VG++ S  LR+GQ VFS+ASLLFMS+GVEF+SYTAFC+LVT+MGLVIPWS TLAM+D 
Sbjct: 10  GAVGSAGSLGLRVGQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKLCRRYQ 125
           YS+LV CPLR PG++VI+VIGDWVL++L+LAAA S+A+V+DLLL  + S+C  + C RYQ
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 ISAAMAFLSWFLSFASSLLNLWLLPS 152
           +SA MAFLSWFL+ ASSL NLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

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BLAST of MS020522 vs. ExPASy Swiss-Prot
Match: B8BPI2 (CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-48
Identity = 98/146 (67.12%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 6   GSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTLAMVDG 65
           G+VG++ S  LR+ Q VFS+ASLLFMS+GVEF+SYTAFC+LVT+MGLVIPWS TLAM+D 
Sbjct: 10  GAVGSAGSLGLRVEQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKLCRRYQ 125
           YS+LV CPLR PG++VI+VIGDWVL++L+LAAA S+A+V+DLLL  + S+C  + C RYQ
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 ISAAMAFLSWFLSFASSLLNLWLLPS 152
           +SA MAFLSWFL+ ASSL NLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]

BLAST of MS020522 vs. ExPASy Swiss-Prot
Match: Q3ECT8 (CASP-like protein 5C3 OS=Arabidopsis thaliana OX=3702 GN=At1g49405 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-45
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M EVPGSVGT+AS SLRLGQ V +  SLLFM++GV FY +TAFCYLVT+M L IPW+ TL
Sbjct: 1   MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           AMVD Y V+++ P ++P IL+ I IGDWV+S+L LA+A S ASVVD +L SN S CP  +
Sbjct: 61  AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVD-ILRSNESSCPPTI 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           C RYQ +A +AFL+WFLS +SSL NLWLLPSL
Sbjct: 121 CNRYQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

[Close]

BLAST of MS020522 vs. ExPASy Swiss-Prot
Match: B6U300 (CASP-like protein 5C1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 3.8e-44
Identity = 92/146 (63.01%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 6   GSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTLAMVDG 65
           G+VG++ S  LR+GQ VFS+ASLLFMS+GVEF+SYTAFC+LVT+MGLVIPWS TLAM+D 
Sbjct: 12  GAVGSAGSLGLRVGQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 71

Query: 66  YSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKLCRRYQ 125
           YSV V CPLR PG++VI+V+GD  LS+++ AAACS+A+V+DLLL  + S+     C RYQ
Sbjct: 72  YSVFVGCPLRVPGVMVIVVVGDCALSIVSFAAACSSAAVIDLLLQLHGSHSSPTFCGRYQ 131

Query: 126 ISAAMAFLSWFLSFASSLLNLWLLPS 152
           +SA MAFLSW L  AS+  NLW + S
Sbjct: 132 LSAMMAFLSWLLMAASATFNLWFVAS 157

[Close]

BLAST of MS020522 vs. ExPASy Swiss-Prot
Match: D7LTJ4 (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_485429 PE=3 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-38
Identity = 85/152 (55.92%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           ME VPGS GTSASF+LR GQT+FS ASL+FM    +FY +T FCYL TVM +V PWS  L
Sbjct: 1   MENVPGSFGTSASFALRFGQTIFSAASLIFMCFDYDFYDFTTFCYLATVMAIVTPWSILL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+ D YSVLVK   ++  +L I+  GD+VLS L+L  AC+ AS  +LL  ++   C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGNL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           C +YQ+SAA+AFL WFL  AS+L N W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of MS020522 vs. ExPASy TrEMBL
Match: A0A6J1D5M1 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111017145 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.7e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL
Sbjct: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL
Sbjct: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 152

[Close]

BLAST of MS020522 vs. ExPASy TrEMBL
Match: A0A6J1G621 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451131 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68
Identity = 138/152 (90.79%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT  SFSLRLGQTVFS+ASLLFMSLG+EFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDVVPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL II++GDWVLSLLTLAAACSTASVVD+LLHS+SSYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLHSDSSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAFLSWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFLSWFLSFASSLFNLWLLPSL 152

[Close]

BLAST of MS020522 vs. ExPASy TrEMBL
Match: A0A0A0LP49 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G239410 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 138/152 (90.79%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT ASFSLRLGQT FS+ASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDAVPGSVGTGASFSLRLGQTAFSSASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL IIV+GDWVLSLLTLAAACSTASVVD+LLH +SSYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHLDSSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAF SWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFFSWFLSFASSLFNLWLLPSL 152

[Close]

BLAST of MS020522 vs. ExPASy TrEMBL
Match: A0A5D3CT75 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001600 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT ASFSLRLGQT FS+ASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 14  MDAVPGSVGTGASFSLRLGQTAFSSASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 73

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL IIV+GDWVLSLLTLAAACSTASVVD+LLH + SYCP KL
Sbjct: 74  ALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHLDGSYCPSKL 133

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAF SWFLSFASSL NLWLLPSL
Sbjct: 134 CRRYQISAAMAFFSWFLSFASSLFNLWLLPSL 165

[Close]

BLAST of MS020522 vs. ExPASy TrEMBL
Match: A0A1S3CB03 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498442 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGSVGT ASFSLRLGQT FS+ASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL
Sbjct: 1   MDAVPGSVGTGASFSLRLGQTAFSSASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+VDGYSVLVKCPLRQPGIL IIV+GDWVLSLLTLAAACSTASVVD+LLH + SYCP KL
Sbjct: 61  ALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHLDGSYCPSKL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           CRRYQISAAMAF SWFLSFASSL NLWLLPSL
Sbjct: 121 CRRYQISAAMAFFSWFLSFASSLFNLWLLPSL 152

[Close]

BLAST of MS020522 vs. TAIR 10
Match: AT1G49405.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 184.1 bits (466), Expect = 8.3e-47
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M EVPGSVGT+AS SLRLGQ V +  SLLFM++GV FY +TAFCYLVT+M L IPW+ TL
Sbjct: 1   MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           AMVD Y V+++ P ++P IL+ I IGDWV+S+L LA+A S ASVVD +L SN S CP  +
Sbjct: 61  AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVD-ILRSNESSCPPTI 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           C RYQ +A +AFL+WFLS +SSL NLWLLPSL
Sbjct: 121 CNRYQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

[Close]

BLAST of MS020522 vs. TAIR 10
Match: AT3G50810.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39
Identity = 84/152 (55.26%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           ME VPGS GTSASF+LR GQT+FS ASL+FM    +FY +T FCYL  VM +V PWS  L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A+ D YSVLVK   ++  +L I+  GD+VLS L+L  AC+ AS  +LL  ++   C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           C +YQ+SAA+AFL WFL  AS+L N W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of MS020522 vs. TAIR 10
Match: AT4G37235.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 89/154 (57.79%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLG--VEFYSYTAFCYLVTVMGLVIPWSF 60
           M     S GTS+SF LRLGQT+FS+ASLLFM      +FY+YT FCYLVTVMGLV PWS 
Sbjct: 1   MVRTTASFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSV 60

Query: 61  TLAMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPL 120
           TLA+++ YS+LVK    Q  ++ +IV GD+VLS L+L  ACSTASV  LL+ +       
Sbjct: 61  TLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLMDAGE----- 120

Query: 121 KLCRRYQISAAMAFLSWFLSFASSLLNLWLLPSL 153
           K C RY++SA MAFLS FLSFAS+  N  LLPSL
Sbjct: 121 KQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

[Close]

BLAST of MS020522 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+++ GS GT +   LRLGQ   + AS+  M    +F +YTAFC+LV  MGL + WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYC---P 120
           A +D Y++  K  LR P +L +  +GDWV +LL LAAACS+A V  +L   ++ +C   P
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVT-VLFTKDTEFCRQQP 120

Query: 121 LKLCRRYQISAAMAFLSWFLSFASSLLNLWLL 150
              C R+QIS  ++F +WFL+  SS    W+L
Sbjct: 121 ALSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of MS020522 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 63/151 (41.72%), Postives = 90/151 (59.60%), Query Frame = 0


Query: 1   MEEVPGSVGTSASFSLRLGQTVFSTASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M ++PG+ GT     LR+ Q VF+  S+ +M     F+S+TAFCYL+  MGL + WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  AMVDGYSVLVKCPLRQPGILVIIVIGDWVLSLLTLAAACSTASVVDLLLHSNSSYCPLKL 120
           A++D ++++ K  L  P ++ + V+GDWV S L+LA A S+A +  L      S      
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CRRYQISAAMAFLSWFLSFASSLLNLWLLPS 152
           C +YQ+S A+AFL W     SSL  LWLL S
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

The following BLAST results are available for this feature:

BLAST of MS020522 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148516.1	9.8e-74	100.00	CASP-like protein 5C1 [Momordica charantia]	[more]
XP_022947184.1	4.7e-68	90.79	CASP-like protein 5C1 [Cucurbita moschata] >XP_023533781.1 CASP-like protein 5C1...	[more]
XP_038901622.1	4.7e-68	91.45	CASP-like protein 5C1 [Benincasa hispida]	[more]
XP_004145336.1	3.0e-67	90.79	CASP-like protein 5C1 [Cucumis sativus] >KGN61776.1 hypothetical protein Csa_006...	[more]
XP_008459268.1	8.9e-67	90.13	PREDICTED: CASP-like protein 5C1 [Cucumis melo]	[more]

BLAST of MS020522 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10EJ2	2.3e-49	67.81	CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 P...	[more]
B8BPI2	1.9e-48	67.12	CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 S...	[more]
Q3ECT8	1.2e-45	64.47	CASP-like protein 5C3 OS=Arabidopsis thaliana OX=3702 GN=At1g49405 PE=2 SV=1	[more]
B6U300	3.8e-44	63.01	CASP-like protein 5C1 OS=Zea mays OX=4577 PE=2 SV=2	[more]
D7LTJ4	2.4e-38	55.92	CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972...	[more]

BLAST of MS020522 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5M1	4.7e-74	100.00	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111017145 PE=3 SV=1	[more]
A0A6J1G621	2.3e-68	90.79	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451131 PE=3 SV=1	[more]
A0A0A0LP49	1.5e-67	90.79	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G239410 PE=3 SV=1	[more]
A0A5D3CT75	4.3e-67	90.13	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A1S3CB03	4.3e-67	90.13	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498442 PE=3 SV=1	[more]

BLAST of MS020522 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49405.1	8.3e-47	64.47	Uncharacterised protein family (UPF0497)	[more]
AT3G50810.1	8.3e-39	55.26	Uncharacterised protein family (UPF0497)	[more]
AT4G37235.1	1.5e-35	57.79	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	2.6e-24	43.42	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	3.4e-24	41.72	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 9..137 e-value: 8.5E-25 score: 87.3
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..151
None	No IPR available	PANTHER	PTHR32021:SF32	CASP-LIKE PROTEIN 5C3	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020522.1	MS020522.1	mRNA