MS020506 (gene) Bitter gourd (TR) v1

Overview


Name	MS020506
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cold-regulated 413 plasma membrane protein 2-like
Location	scaffold375: 746264 .. 748974 (+)
RNA-Seq Expression	MS020506
Synteny	MS020506

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAACCGGGATACTTGAAAATGACGACGGATTCCGACGCCGTAGATCTGCTTTCTTCTGATCTTCGGGAACTCGGTAATGCTGCTAAGAAGCTTGCTACACACGCCGTCAAGCTCGGTAGCGCGGGTTTCGGCGCTGCTTTCCTCCAGTGGATTGCTTCGTTTGCTGCTATGTAAATCTCTCTCTTCCTCTCTCTTTACGAGCTGTTTTCTGGCTTTCTTCCTGTTGCTTACTGGTCCGGTGTAGTGGTTTGTTTCATTTCTGATTATCCATTGACGTTTTGAGCCCTAATCTGCGATTTCGATTCTATAGGAATAGTTTGTGCTTTGCGATTCGTTGTATTTTCAACTGGAGTAATTCGTCTCTGTTAATTCGTGTCAAATCGATTAAGTAATACGGGAACGATTCGCTTACAGGAGTGATCCGTGCGACAAAAAGTGCTTCTGATTTTTTCAAATGATCCGTGAATCGTTGGCTTGATTGGCCGTCTGCTTTTTTCTCTTTAGGTTTTTCAGGATCGTTTGATTTGGCTCCGTATTTTACAACTTGAACTTTTGATTTTGTGGGTTTGTGAGTGCAGTTATTTGTTGGTTTTGGATCGAACGAACTGGAAGACGAATATCCTTACATCACTGTTGATTCCGTACATTTTCTTCAGTCTTCCCGGGGTGATTTTTGGTTTCTTCAGGTGATCATCTCCAGCTCCACTCTAGGACAATAATCCAAGCAATGAGTTTCTATTGTCTCTAAATTCTAAATTTATTTCTCTTGCAGGGGAGATGTTGGAAAATGGATCGCCTTCATTGCTGTTGTGCTGCGTCTTTTCTTCCCCAAACAATTCCCAGGTAATTTCGGGGCTCGATTTTATTACAGATAGGTTTAAACTATTTTTATCAGTTCATTTTGTTTTCATCTTCGTTTTTGTTCATTTTAGTTTTATATTTCATACCGTCAATTTTTGTCCATGTACCCCCCTAAAAAGGGAACATTTTTATATTTATTTAACCGATAAAAAAGTTTCTGACTATCATTTCAAAAAAATTTGTGAGTAAAGAAAAAATAAAATAAAGAGATAAAAATAGTCGTTTTTAAAGAGCCTAGGTACAAAATCAAACGTTAAACTGCCGAGATTCAAAAGTACAGGGATCAAAAGGGATCAAATTGGATATTTTGAAAGTATAGGTTCCAAAATAGAGGTTTTGAAGTAATAAGATCAAAATGAACTAAAATCAAAAATACAATCAACAAAATACTTACAAATATTATTGAATTCACTTTTTTGTTTTAAACAGTACAAAATCTGCTTACTGATATTATGTTGAACTAGATTTAGAGTCATTAGTAGTTCTGCTTAATTTCTTTTTCTTACTGTTTTCCTTTTGGTAGAACATAAAAAATGGGAGAAATTTGGATGACTACCCACATGGACTAGTCTTTCTCTCTGCCAATTTTTGGTCTTTTCTCTTTTTTTTTTTTTTGTTTAATTTTTTTTCAAGTCNNNNNNNNNNTTATTTGTTTTTTTCACTTTTTAGAAGTTCTTATGAAATCTCTGCAAAATTAATTTAAAAGAAAAAAAGTTCTCTAAAAACTATGGGTTGCATTTTTTTTAAAAAAAAATAAGTAGATCAATGTTCAAATTTGTTTTGGAAAGGTATATTTTATTCTCAAAAGTTTTCGTTTATTTCTTCTTTAATCGTTATATTAATTTTAAAATAAGTTATAGTTGAAAAATAATTAATAATCATATGTGAACGGTTAATTTAGAAGGAAAAAAATCAAATAAAACACATGAAATCAACAATATATTATTTATATTATTTACTATATGTTAATTCTGAAAAGTATTTTTTAAAGTTTACCATCTCAAACAAGTTTTCAACTTTTAAACAAATCTCAAAAAGTTTATAAATAGAAAAAAACTGTTGTTAGAGCAGGACTTGCAAAAAGATTCATATCTTTATCATTTTCAAAATTTTCACCAATAATAAAAAATCAATATCAAACAAACTTGTTTAAAAAAATATATATGTATAATATATCGAACAAAACTTAACATCATCATTGAGCTTATAAAGTGGGGCAGATATTAAAGTATCAAGAGATCCAAAACTTAGTTAAAATATAACACCTTTAAGCATTTAATATATGTTCAAAACTCTCTCACATTAGTGTTCCAATTCCCAAGATAATTTGATTCACCAAGTATAGGGAATAAAATAACATCTCAAACCTCATTCATACTTAAATAACACTCCAATCTCATAGCTTTCTTTTGTCCTGAGGAAATCCAGTTTTACTGCTTCAAACTTGCTGAGTTCATAGAAATTCCACATCACATGAGTTTCTGATATCATGTTGAGTTATAATATCCTGTTCAGTTTGCAAGCATAAATAAATATGATAACAATCTGAGTTATTGCACTCCATTTCTCTGATTTCTTTGTGGGAAAATTCAGATTGGCTTGAACTGCCCGGCGCTTTGATACTTCTCGTCGTGGTGGCTCCGGGGTTATTTGCAAGCACCGTGAGGGGCGACGCCATCGGAGAAGCAATCTGTCTGGTCATATCATGCTATTTGCTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCCTTCACCAAAGCCAGTGGCATTTCAAACACCATTGGAATCATCCTCATCTTTGTGTATCCTGTCTGGGCACTGGTACTTCGTTTCCTT

mRNA sequence

ATGGTGAAACCGGGATACTTGAAAATGACGACGGATTCCGACGCCGTAGATCTGCTTTCTTCTGATCTTCGGGAACTCGGTAATGCTGCTAAGAAGCTTGCTACACACGCCGTCAAGCTCGGTAGCGCGGGTTTCGGCGCTGCTTTCCTCCAGTGGATTGCTTCGTTTGCTGCTATTTATTTGTTGGTTTTGGATCGAACGAACTGGAAGACGAATATCCTTACATCACTGTTGATTCCGTACATTTTCTTCAGTCTTCCCGGGGTGATTTTTGGTTTCTTCAGGGGAGATGTTGGAAAATGGATCGCCTTCATTGCTGTTGTGCTGCGTCTTTTCTTCCCCAAACAATTCCCAGATTGGCTTGAACTGCCCGGCGCTTTGATACTTCTCGTCGTGGTGGCTCCGGGGTTATTTGCAAGCACCGTGAGGGGCGACGCCATCGGAGAAGCAATCTGTCTGGTCATATCATGCTATTTGCTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCCTTCACCAAAGCCAGTGGCATTTCAAACACCATTGGAATCATCCTCATCTTTGTGTATCCTGTCTGGGCACTGGTACTTCGTTTCCTT

Coding sequence (CDS)

ATGGTGAAACCGGGATACTTGAAAATGACGACGGATTCCGACGCCGTAGATCTGCTTTCTTCTGATCTTCGGGAACTCGGTAATGCTGCTAAGAAGCTTGCTACACACGCCGTCAAGCTCGGTAGCGCGGGTTTCGGCGCTGCTTTCCTCCAGTGGATTGCTTCGTTTGCTGCTATTTATTTGTTGGTTTTGGATCGAACGAACTGGAAGACGAATATCCTTACATCACTGTTGATTCCGTACATTTTCTTCAGTCTTCCCGGGGTGATTTTTGGTTTCTTCAGGGGAGATGTTGGAAAATGGATCGCCTTCATTGCTGTTGTGCTGCGTCTTTTCTTCCCCAAACAATTCCCAGATTGGCTTGAACTGCCCGGCGCTTTGATACTTCTCGTCGTGGTGGCTCCGGGGTTATTTGCAAGCACCGTGAGGGGCGACGCCATCGGAGAAGCAATCTGTCTGGTCATATCATGCTATTTGCTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCCTTCACCAAAGCCAGTGGCATTTCAAACACCATTGGAATCATCCTCATCTTTGTGTATCCTGTCTGGGCACTGGTACTTCGTTTCCTT

Protein sequence

MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIYLLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDWLELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGISNTIGIILIFVYPVWALVLRFL

Homology

[Close]

BLAST of MS020506 vs. NCBI nr
Match: XP_022148672.1 (cold-regulated 413 plasma membrane protein 2-like [Momordica charantia])

HSP 1 Score: 394.4 bits (1012), Expect = 5.8e-106
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY
Sbjct: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW
Sbjct: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI
Sbjct: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIILIFVYPVWALVLRFL
Sbjct: 181 SNTIGIILIFVYPVWALVLRFL 202

[Close]

BLAST of MS020506 vs. NCBI nr
Match: XP_038902783.1 (cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 5.1e-94
Identity = 175/202 (86.63%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP YLKM TDSDA DL+SSDLRELGNAAKKLATHAVKL ++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNYLKMVTDSDAADLISSDLRELGNAAKKLATHAVKLCASGFAASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPGVIFGF RG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFA T+RGDAIGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFAHTIRGDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGI+L+FV+PVWALVLR L
Sbjct: 181 SNTIGIVLLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. NCBI nr
Match: KAA0045966.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 175/202 (86.63%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP +LKM TDSDA DL+SSDLRELGNAA+KLATHAVKLG++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPG+IFGF RG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFASTVR DAIGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALVLR L
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. NCBI nr
Match: XP_008459238.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93
Identity = 174/202 (86.14%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP +LKM TDSDA DL+SSDLRELGNAA+KLATHAVKLG++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPG+IFGF RG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFAST+R DAIGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALVLR L
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. NCBI nr
Match: XP_004145347.1 (cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypothetical protein Csa_006288 [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93
Identity = 174/202 (86.14%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP +LKM TDSDA DL+SSDLRELGNAA+KLATHAVKLG++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFA T+R D IGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALVLR L
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-71
Identity = 137/203 (67.49%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MVKPGYLKMTTDS-DAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAI 60
           M +  YL M TD  D V L++SD+ EL  AAKKL +   KLG  GFG +FL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPD 120
           YLL+LDRTNWKT +LTSLLIPYIF SLP VIF F  GDVGKWIAF+AVVLRLFFPK FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASG 180
           WLE+PG+LILL+VV+P   A  +RG  IG  I L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIILIFVYPVWALVLRFL 203
           +SNT+GIIL+ VYPVWAL++R +
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of MS020506 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.4e-67
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 18  LLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIYLLVLDRTNWKTNILTSL 77
           ++ SD  EL  AAK LATHA  L   GFG + L+W+AS AAIYLLVLDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDWLELPGALILLVVVAPGL 137
           LIPYIFFSLP +IFG FRG++GKWIAF+AVV++LFFPK   ++LELP AL+LL VVAP L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGISNTIGIILIFVYPVWAL 197
            A T R   IG AICL I CYLLQEHIRASGGFRN+FTKA+GISNT+GII + V+PVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 V 199
           +
Sbjct: 196 I 196

[Close]

BLAST of MS020506 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-65
Identity = 119/192 (61.98%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 6   YLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIYLLVLD 65
           +L M T+ +A +L++SD+ E   AAKKL      LG  GFG + LQW AS  AIYLL+LD
Sbjct: 6   FLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIYLLILD 65

Query: 66  RTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDWLELPG 125
           RTNWKT +LT+LL+PYIFF+LP VIF FF GD GKWIA IA+++RLFFPK+FP+WLE+P 
Sbjct: 66  RTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEWLEIPV 125

Query: 126 ALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGISNTIG 185
           ALIL+VVV+P L A T+R   +G  ICLVI+CYL  EHI+ASGGF+NSFT+ +GISNTIG
Sbjct: 126 ALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGISNTIG 185

Query: 186 IILIFVYPVWAL 198
           I+ + VYPVW +
Sbjct: 186 IVALLVYPVWTI 197

[Close]

BLAST of MS020506 vs. ExPASy Swiss-Prot
Match: O64834 (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-33
Identity = 72/150 (48.00%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLVLDRTNWK--TNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIA 108
           FL+W+AS  A++L++LD+T WK   NI+ SLL PY+F SLP VIF   R  VGKWIA + 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPKQFPDWLELPGALILLVVVAPGLFASTVRGDA--IGEAICLVISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILL+VV P    +  R D    G  +CL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKASGISNTIGIILIFVYPV 195
           +A GG +NSFT+   ++ +I + ++FVYP+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

[Close]

BLAST of MS020506 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 50/142 (35.21%), Postives = 77/142 (54.23%), Query Frame = 0


Query: 50  LQWIASFAAIYLLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVL 109
           LQWI++ + + L+        T I  S ++P      P  I  + +G+ G W AF+A++ 
Sbjct: 86  LQWISTISCVALMFAR----GTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLT 145

Query: 110 RLFFPKQFPDWLELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGG 169
           RLFF   FP  LELP   +LLV+VAP    S +RG   G  + L ISC+L  +H   +G 
Sbjct: 146 RLFF--SFPVELELPFIALLLVIVAPYQVMS-IRGKQEGAILSLAISCFLAFQHFSRAGT 205

Query: 170 FRNSFTKASGISNTIGIILIFV 192
            + +F + S ++ T+ II + V
Sbjct: 206 LQKAFDQNSVLA-TVAIIGVTV 219

[Close]

BLAST of MS020506 vs. ExPASy TrEMBL
Match: A0A6J1D5Q1 (cold-regulated 413 plasma membrane protein 2-like OS=Momordica charantia OX=3673 GN=LOC111017274 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.8e-106
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY
Sbjct: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW
Sbjct: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI
Sbjct: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIILIFVYPVWALVLRFL
Sbjct: 181 SNTIGIILIFVYPVWALVLRFL 202

[Close]

BLAST of MS020506 vs. ExPASy TrEMBL
Match: A0A5A7TUZ7 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005140 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.5e-94
Identity = 175/202 (86.63%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP +LKM TDSDA DL+SSDLRELGNAA+KLATHAVKLG++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPG+IFGF RG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFASTVR DAIGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALVLR L
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. ExPASy TrEMBL
Match: A0A0A0LIW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.1e-94
Identity = 174/202 (86.14%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP +LKM TDSDA DL+SSDLRELGNAA+KLATHAVKLG++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFA T+R D IGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALVLR L
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. ExPASy TrEMBL
Match: A0A1S3CAX8 (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103498423 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.1e-94
Identity = 174/202 (86.14%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP +LKM TDSDA DL+SSDLRELGNAA+KLATHAVKLG++GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPG+IFGF RG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAP LFAST+R DAIGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALVLR L
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MS020506 vs. ExPASy TrEMBL
Match: A0A6J1FVU6 (cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448574 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 174/202 (86.14%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MVKPGYLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIY 60
           MVKP YLKM TDSDA DL+S+DLRELGNAAKKLATHAV+LG++GF AAFLQW+ASFAAIY
Sbjct: 1   MVKPSYLKMVTDSDAADLISNDLRELGNAAKKLATHAVQLGASGFPAAFLQWLASFAAIY 60

Query: 61  LLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDW 120
           LL+LDRTNWKTNILTSLLIPYIFFSLPGVIF F RG+ GKW+A IAVVLRLFFP++FPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFFFLRGEFGKWVAAIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGI 180
           LELPGALILL+VVAPGLFAST+R DAIGEAICL+ISCYLLQEHIRASGGFRNSFTKA+GI
Sbjct: 121 LELPGALILLIVVAPGLFASTMRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILIFVYPVWALVLRFL 203
           SNTIGIIL+FV+PVWALV+R L
Sbjct: 181 SNTIGIILLFVFPVWALVVRVL 202

[Close]

BLAST of MS020506 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-72
Identity = 137/203 (67.49%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MVKPGYLKMTTDS-DAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAI 60
           M +  YL M TD  D V L++SD+ EL  AAKKL +   KLG  GFG +FL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLVLDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPD 120
           YLL+LDRTNWKT +LTSLLIPYIF SLP VIF F  GDVGKWIAF+AVVLRLFFPK FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASG 180
           WLE+PG+LILL+VV+P   A  +RG  IG  I L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIILIFVYPVWALVLRFL 203
           +SNT+GIIL+ VYPVWAL++R +
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of MS020506 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 254.6 bits (649), Expect = 6.7e-68
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 18  LLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIYLLVLDRTNWKTNILTSL 77
           ++ SD  EL  AAK LATHA  L   GFG + L+W+AS AAIYLLVLDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDWLELPGALILLVVVAPGL 137
           LIPYIFFSLP +IFG FRG++GKWIAF+AVV++LFFPK   ++LELP AL+LL VVAP L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGISNTIGIILIFVYPVWAL 197
            A T R   IG AICL I CYLLQEHIRASGGFRN+FTKA+GISNT+GII + V+PVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 V 199
           +
Sbjct: 196 I 196

[Close]

BLAST of MS020506 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66
Identity = 119/192 (61.98%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 6   YLKMTTDSDAVDLLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIYLLVLD 65
           +L M T+ +A +L++SD+ E   AAKKL      LG  GFG + LQW AS  AIYLL+LD
Sbjct: 6   FLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIYLLILD 65

Query: 66  RTNWKTNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDWLELPG 125
           RTNWKT +LT+LL+PYIFF+LP VIF FF GD GKWIA IA+++RLFFPK+FP+WLE+P 
Sbjct: 66  RTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEWLEIPV 125

Query: 126 ALILLVVVAPGLFASTVRGDAIGEAICLVISCYLLQEHIRASGGFRNSFTKASGISNTIG 185
           ALIL+VVV+P L A T+R   +G  ICLVI+CYL  EHI+ASGGF+NSFT+ +GISNTIG
Sbjct: 126 ALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGISNTIG 185

Query: 186 IILIFVYPVWAL 198
           I+ + VYPVW +
Sbjct: 186 IVALLVYPVWTI 197

[Close]

BLAST of MS020506 vs. TAIR 10
Match: AT2G15970.2 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-46
Identity = 93/138 (67.39%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 18  LLSSDLRELGNAAKKLATHAVKLGSAGFGAAFLQWIASFAAIYLLVLDRTNWKTNILTSL 77
           ++ SD  EL  AAK LATHA  L   GFG + L+W+AS AAIYLLVLDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFFRGDVGKWIAFIAVVLRLFFPKQFPDWLELPGALILLVVVAPGL 137
           LIPYIFFSLP +IFG FRG++GKWIAF+AVV++LFFPK   ++LELP AL+LL VVAP L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FASTVRGDAIGEAICLVI 156
            A T R   IG AICL I
Sbjct: 136 IAGTFRDSWIGLAICLGI 153

[Close]

BLAST of MS020506 vs. TAIR 10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 72/150 (48.00%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLVLDRTNWK--TNILTSLLIPYIFFSLPGVIFGFFRGDVGKWIAFIA 108
           FL+W+AS  A++L++LD+T WK   NI+ SLL PY+F SLP VIF   R  VGKWIA + 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPKQFPDWLELPGALILLVVVAPGLFASTVRGDA--IGEAICLVISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILL+VV P    +  R D    G  +CL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKASGISNTIGIILIFVYPV 195
           +A GG +NSFT+   ++ +I + ++FVYP+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

The following BLAST results are available for this feature:

BLAST of MS020506 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148672.1	5.8e-106	100.00	cold-regulated 413 plasma membrane protein 2-like [Momordica charantia]	[more]
XP_038902783.1	5.1e-94	86.63	cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]	[more]
KAA0045966.1	1.1e-93	86.63	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
XP_008459238.1	1.5e-93	86.14	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo]	[more]
XP_004145347.1	1.5e-93	86.14	cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypot...	[more]

BLAST of MS020506 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVL6	4.8e-71	67.49	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	9.4e-67	70.17	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23164	1.8e-65	61.98	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O64834	2.3e-33	48.00	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
F4I1G5	1.5e-11	35.21	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of MS020506 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5Q1	2.8e-106	100.00	cold-regulated 413 plasma membrane protein 2-like OS=Momordica charantia OX=3673...	[more]
A0A5A7TUZ7	5.5e-94	86.63	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A0A0LIW2	7.1e-94	86.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1	[more]
A0A1S3CAX8	7.1e-94	86.14	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1FVU6	2.1e-93	86.14	cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS020506 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50830.1	3.4e-72	67.49	cold-regulated 413-plasma membrane 2	[more]
AT2G15970.1	6.7e-68	70.17	cold regulated 413 plasma membrane 1	[more]
AT4G37220.1	1.3e-66	61.98	Cold acclimation protein WCOR413 family	[more]
AT2G15970.2	5.5e-46	67.39	cold regulated 413 plasma membrane 1	[more]
AT2G23680.1	1.7e-34	48.00	Cold acclimation protein WCOR413 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 9..189 e-value: 3.0E-89 score: 297.8
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 1..201
None	No IPR available	PANTHER	PTHR33596:SF18	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020506.1	MS020506.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane