MS020499 (gene) Bitter gourd (TR) v1

Overview


Name	MS020499
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CSL zinc finger domain-containing protein
Location	scaffold375: 678993 .. 681285 (-)
RNA-Seq Expression	MS020499
Synteny	MS020499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGCAGAATGGCCGCGATGAGGACGGCGACAATGGCTTTGGCAGCAATGATGCTGATTTTGGTTGCGGAAGGGACGGATACGAACGATGTATTCAGTCCATGTTTGGATGCGAAAGTTCAGAGATCAGATGGATTCACTTTTGGTGTAGCGTTTTCGTCGAAGGAATCGTTCTTTCAGGATCAGATTCAGTTTTCGCCATGTGATCGACGTCTCGGTTTGGCATCCAAAAACGCTCAGCTTGTTGTTTTCAGGCCTAGGGTCGACCAGCTCTCGCTCCTTACCATCAATAGCACCACCTTCAATCCGGTACGACTTTGATTCATCTCTCTTCATTTTAAAGCAAAATCCAAAAACTATTTTTCATCAATGAAAACTCATCTCTGTTTCTTCCCCTGTTTTTGTCAAGAACATGACTAAGCAAACAAAAATTGTGCCTCTGATGAGTCATAGACTTATTTGATAATTTTTTAAATTTACAAACATGTTAAACACAAAAATGGAAGGTAAATTCTATTAGATATAGAATTGAACTTGATGTCTAATAGATTTATGAGTTCTTTTTTAAATGCCAAATAGGCAGTTGGAGAACCTTTGATAACTATTAATTTTTAGTTCCTTATTTTTTAAAATTATGTTTATTGGCTTATAATTTCTTTTAGTGTGTTTTTCTTTTTACTATTTAGAGATAAAAAAAAAATATAGGATTCAAATAATAAGGCATGAATTCGAACTTAATACCCTTAAAATGTTAATAATCTCTTAACCAATTAAATTATACTTAAGTGGGTAATTTCTTAATCGAAAATTCTCGAGAATACTTTACAACTATTTTTAGCCGTTTGATTAACAAAATATGTAGTGCAACGATAAGAATTCATGATTGATAGATAAAATTGATGACAAGGCATTCAACTGGTGCTCTGCCAATTAAAAACAAAATTCCAACAAACTTTAATTAACTTGCTATAGGATGCTACCCTTTTATATAGCTCTAGTTATCACATTTGTAAAGTTGGCACAAATTCAGAAAAAAAATAAGAATCCCAAAATCATACATATTAAAGAATAAAAAAATTTTATTGGTCAAATCGTGGGTGGATCACTAACTTTTTGAATGTTGAAATAATGAATTAATGGAAGATTTTGGTAGATAATTTTCATATATGAGAGTATAATGTTCAGGAAAATCAGCCTAAGCAAGATTTTAGGAGATCAATTTCAATTAATTCCAAATCAATTTGAATATAAATTTAGATCTCTTTTGGTCTTTTTATGTTAGTCCATAAACTTTTCTTGAATTTTTATAAAAAATCATTTTAGTCTTGTCACTAATTTTTTTTAATAAAATATTTAACATAAATCCAATATAGAAATAGTTTGGTTCGTTTGTCTAATGAGTAAATACTTTAGTAAACAAGTATTAGGAGCCAAGTAGGGTAGGTTAGGACTTTATGTCTAATTGCTCATATAGTTCCTCTAACCATATTTTCTAAACGAACTAGAGCCAATCCGAAATGATCTAAGAGATCTGCGGCCGAATGAATCCGTTTATTTTTCAAAATTGGCATATATCTCCAACCATGAGGTTGTGAGTTCGATCTCCCACCTCACATATTGTACTAAAAAGAAAAAAGTGTTAAGTTTCTAAAAGTAATTTAGATTTATGTTAGATAATTAGCAAGAAAAATTAATAACTTTCTATGCTTAATCCCTGTCAATCAAACGAAATTCAAATCATTACAACTTTACACAATAAAAGTAATTCTTATTATGAATTTTTCTGGTTTGCTGCAGGCTCTGTATGGTGGGTATATGGTAGCATTTGCTGGGCAGAAGTATGCAGCAAGATCTCTCCCAGTATTGATTACTGATAATTCTAACACCATAACTAGTTTCACTTTGGTAAGCCCATAAACCATGTGCAAAGAAAAGAAAAGACCATCATTTCATTATAATTTATAATGACAAAAGTTGTGCTTTCCAGGTTCTTGAATTTCAGAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCACTGGGGACTACTCAGTTTGCCTGGACAACCAAGACTGTGCAGTTCCAAACACCAAATGTAAATTCAATGGTGGTTCCATTGACTGCAATCTGAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAGGTCGACAATCTCAGGCGCTACTCCCTCTATAAACTTTTCTCTGATGTTCGAGATACTATCTCCGATGTTCATGATACCATCACC

mRNA sequence

GAAGGCAGAATGGCCGCGATGAGGACGGCGACAATGGCTTTGGCAGCAATGATGCTGATTTTGGTTGCGGAAGGGACGGATACGAACGATGTATTCAGTCCATGTTTGGATGCGAAAGTTCAGAGATCAGATGGATTCACTTTTGGTGTAGCGTTTTCGTCGAAGGAATCGTTCTTTCAGGATCAGATTCAGTTTTCGCCATGTGATCGACGTCTCGGTTTGGCATCCAAAAACGCTCAGCTTGTTGTTTTCAGGCCTAGGGTCGACCAGCTCTCGCTCCTTACCATCAATAGCACCACCTTCAATCCGGCTCTGTATGGTGGGTATATGGTAGCATTTGCTGGGCAGAAGTATGCAGCAAGATCTCTCCCAGTATTGATTACTGATAATTCTAACACCATAACTAGTTTCACTTTGGTTCTTGAATTTCAGAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCACTGGGGACTACTCAGTTTGCCTGGACAACCAAGACTGTGCAGTTCCAAACACCAAATGTAAATTCAATGGTGGTTCCATTGACTGCAATCTGAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAGGTCGACAATCTCAGGCGCTACTCCCTCTATAAACTTTTCTCTGATGTTCGAGATACTATCTCCGATGTTCATGATACCATCACC

Coding sequence (CDS)

GAAGGCAGAATGGCCGCGATGAGGACGGCGACAATGGCTTTGGCAGCAATGATGCTGATTTTGGTTGCGGAAGGGACGGATACGAACGATGTATTCAGTCCATGTTTGGATGCGAAAGTTCAGAGATCAGATGGATTCACTTTTGGTGTAGCGTTTTCGTCGAAGGAATCGTTCTTTCAGGATCAGATTCAGTTTTCGCCATGTGATCGACGTCTCGGTTTGGCATCCAAAAACGCTCAGCTTGTTGTTTTCAGGCCTAGGGTCGACCAGCTCTCGCTCCTTACCATCAATAGCACCACCTTCAATCCGGCTCTGTATGGTGGGTATATGGTAGCATTTGCTGGGCAGAAGTATGCAGCAAGATCTCTCCCAGTATTGATTACTGATAATTCTAACACCATAACTAGTTTCACTTTGGTTCTTGAATTTCAGAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCACTGGGGACTACTCAGTTTGCCTGGACAACCAAGACTGTGCAGTTCCAAACACCAAATGTAAATTCAATGGTGGTTCCATTGACTGCAATCTGAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAGGTCGACAATCTCAGGCGCTACTCCCTCTATAAACTTTTCTCTGATGTTCGAGATACTATCTCCGATGTTCATGATACCATCACC

Protein sequence

EGRMAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQIQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT

Homology

[Close]

BLAST of MS020499 vs. NCBI nr
Match: XP_022148528.1 (uncharacterized protein LOC111017155 [Momordica charantia])

HSP 1 Score: 479.2 bits (1232), Expect = 2.1e-131
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 4   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 63
           MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 60

Query: 64  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 123
           QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 120

Query: 124 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 183
           PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF
Sbjct: 121 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 180

Query: 184 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT 242
           NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT
Sbjct: 181 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT 238

[Close]

BLAST of MS020499 vs. NCBI nr
Match: XP_023513242.1 (uncharacterized protein LOC111777756 [Cucurbita pepo subsp. pepo] >XP_023521760.1 uncharacterized protein LOC111785616 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108
Identity = 188/235 (80.00%), Postives = 217/235 (92.34%), Query Frame = 0


Query: 1   EGRMAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQ 60
           EGRM AMRT T+ L   +L+LVAEG DTNDV+SPCLDAK+Q+SDGFTFG+AFSSKE+FFQ
Sbjct: 4   EGRMGAMRTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQ 63

Query: 61  DQIQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAA 120
           DQIQFSPCD RL L  KN QL +FRP+VDQLSLLTINSTTFNPA+ GGYMVAFAG KYAA
Sbjct: 64  DQIQFSPCDTRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAA 123

Query: 121 RSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTK 180
           RSLPV+ITDNS+TITSFTLV EFQKGTLQNLFWKK+GC+KCTGD+SVCLDNQDCAV ++K
Sbjct: 124 RSLPVMITDNSHTITSFTLVFEFQKGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSK 183

Query: 181 CKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           CK++GGS+DCN+SIQLAFSGTDRNLEVLNSWFE+DNL R+SL+KLF+DVRDT+++
Sbjct: 184 CKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEIDNLMRFSLFKLFADVRDTVTN 238

[Close]

BLAST of MS020499 vs. NCBI nr
Match: XP_011649210.1 (uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736519.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736520.1 uncharacterized protein LOC101222204 [Cucumis sativus] >KAE8651859.1 hypothetical protein Csa_006582 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 190/232 (81.90%), Postives = 215/232 (92.67%), Query Frame = 0


Query: 4   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 63
           M  MR   +AL   +L+LV EG DTNDV+SPCLD+K+QRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 64  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 123
           QFSPCD RL LASK AQLVVFRP+VDQLS LTINS+TFNPAL GGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 124 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 183
           PV+ITDNSNTITSFTLVLEFQ+G LQNLFWKKFGCDKC+GD+S+C+DNQDCA+PN+KCK+
Sbjct: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 184 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           NGGS+DCNL IQLAFSGTD+NLEVLNSW+EVDNLRR+SLY+LFSDVRDT+++
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTN 232

[Close]

BLAST of MS020499 vs. NCBI nr
Match: XP_022986594.1 (uncharacterized protein LOC111484289 [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 4.3e-108
Identity = 187/235 (79.57%), Postives = 217/235 (92.34%), Query Frame = 0


Query: 1   EGRMAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQ 60
           EGRM AMRT T+ L   +L+LVAEGTDTN+++SPCLDAK+Q+SDGFTFG+AFSSKE+FFQ
Sbjct: 7   EGRMGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQ 66

Query: 61  DQIQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAA 120
           DQIQFSPCD RL L  KN QL +FRP+VDQLSLLTINSTTFNPA+ GGYMVAFAG KYAA
Sbjct: 67  DQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAA 126

Query: 121 RSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTK 180
           RSLPV+ITDNS+TITSFTLV EFQ+GTLQNLFWKK+GC+KCTGD+SVCLDNQDC V ++K
Sbjct: 127 RSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSK 186

Query: 181 CKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           CK++GGS+DCN+SIQLAFSGTDRNLEVLNSWFEVDNL R+SL+KLFSDVRDT+++
Sbjct: 187 CKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTN 241

[Close]

BLAST of MS020499 vs. NCBI nr
Match: XP_022944397.1 (uncharacterized protein LOC111448855 [Cucurbita moschata])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 187/235 (79.57%), Postives = 216/235 (91.91%), Query Frame = 0


Query: 1   EGRMAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQ 60
           EGRM AM T T+ L   +L+LVAEG DTNDV+SPCLDAK+Q+SDGFTFG+AFSSKE+FFQ
Sbjct: 4   EGRMGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQ 63

Query: 61  DQIQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAA 120
           DQIQFSPCD RL L  KN QL +FRP+VDQLSLLTINSTTFNPA+ GGYMVAFAG KYAA
Sbjct: 64  DQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAA 123

Query: 121 RSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTK 180
           RSLPV+ITDNS+TITSFTLV EFQ+GTLQNLFWKK+GC+KCTGD+SVCLDNQDCAV ++K
Sbjct: 124 RSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSK 183

Query: 181 CKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           CK++GGS+DCN+SIQLAFSGTDRNLEVLNSWFEVDNL R+SL+KLF+DVRDT+++
Sbjct: 184 CKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTN 238

[Close]

BLAST of MS020499 vs. ExPASy TrEMBL
Match: A0A6J1D4C1 (uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017155 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.0e-131
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 4   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 63
           MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 60

Query: 64  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 123
           QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 120

Query: 124 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 183
           PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF
Sbjct: 121 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 180

Query: 184 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT 242
           NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT
Sbjct: 181 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTIT 238

[Close]

BLAST of MS020499 vs. ExPASy TrEMBL
Match: A0A6J1JGG7 (uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 187/235 (79.57%), Postives = 217/235 (92.34%), Query Frame = 0


Query: 1   EGRMAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQ 60
           EGRM AMRT T+ L   +L+LVAEGTDTN+++SPCLDAK+Q+SDGFTFG+AFSSKE+FFQ
Sbjct: 7   EGRMGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQ 66

Query: 61  DQIQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAA 120
           DQIQFSPCD RL L  KN QL +FRP+VDQLSLLTINSTTFNPA+ GGYMVAFAG KYAA
Sbjct: 67  DQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAA 126

Query: 121 RSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTK 180
           RSLPV+ITDNS+TITSFTLV EFQ+GTLQNLFWKK+GC+KCTGD+SVCLDNQDC V ++K
Sbjct: 127 RSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSK 186

Query: 181 CKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           CK++GGS+DCN+SIQLAFSGTDRNLEVLNSWFEVDNL R+SL+KLFSDVRDT+++
Sbjct: 187 CKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTN 241

[Close]

BLAST of MS020499 vs. ExPASy TrEMBL
Match: A0A6J1FVK1 (uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC111448855 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.0e-107
Identity = 187/235 (79.57%), Postives = 216/235 (91.91%), Query Frame = 0


Query: 1   EGRMAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQ 60
           EGRM AM T T+ L   +L+LVAEG DTNDV+SPCLDAK+Q+SDGFTFG+AFSSKE+FFQ
Sbjct: 4   EGRMGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQ 63

Query: 61  DQIQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAA 120
           DQIQFSPCD RL L  KN QL +FRP+VDQLSLLTINSTTFNPA+ GGYMVAFAG KYAA
Sbjct: 64  DQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAA 123

Query: 121 RSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTK 180
           RSLPV+ITDNS+TITSFTLV EFQ+GTLQNLFWKK+GC+KCTGD+SVCLDNQDCAV ++K
Sbjct: 124 RSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSK 183

Query: 181 CKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           CK++GGS+DCN+SIQLAFSGTDRNLEVLNSWFEVDNL R+SL+KLF+DVRDT+++
Sbjct: 184 CKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTN 238

[Close]

BLAST of MS020499 vs. ExPASy TrEMBL
Match: A0A1S3CA87 (uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 182/232 (78.45%), Postives = 216/232 (93.10%), Query Frame = 0


Query: 4   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 63
           M+ MR   +AL   +L+LVAEG DTNDV+SPCLD+K+QRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 64  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 123
           QFSPCD RL LASKNAQL VFRP+VDQLS LTI+++TFNPAL GGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 124 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 183
           PV++TDNS+TITSFTLV EF++GTLQNLFWKKFGCDKC+GD+S+C+DNQDCA+ ++KCK+
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 184 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           +GGS+DCNL IQLAFSGTD+NLEVLNSW+E+DNLRR+SLY+LFSDVRDT+++
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTN 232

[Close]

BLAST of MS020499 vs. ExPASy TrEMBL
Match: A0A5D3CQC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00800 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 182/232 (78.45%), Postives = 216/232 (93.10%), Query Frame = 0


Query: 4   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 63
           M+ MR   +AL   +L+LVAEG DTNDV+SPCLD+K+QRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 64  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 123
           QFSPCD RL LASKNAQL VFRP+VDQLS LTI+++TFNPAL GGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 124 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 183
           PV++TDNS+TITSFTLV EF++GTLQNLFWKKFGCDKC+GD+S+C+DNQDCA+ ++KCK+
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 184 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           +GGS+DCNL IQLAFSGTD+NLEVLNSW+E+DNLRR+SLY+LFSDVRDT+++
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTN 232

[Close]

BLAST of MS020499 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77
Identity = 139/244 (56.97%), Postives = 180/244 (73.77%), Query Frame = 0


Query: 7   MRTATMALAAMMLILVAE----GTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQ 66
           MR +T  +  MM++++ +      D N V+SPC D ++ + DGFT G+A SSKE+FF DQ
Sbjct: 120 MRNSTTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ 179

Query: 67  IQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARS 126
           +Q SPCD RLGLA+K AQL +FRP+VD++SLL+I+++ FNP+  GG+MV FAG KYAARS
Sbjct: 180 VQLSPCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARS 239

Query: 127 LPVLITDNSNTITSFT---------LVLEFQKGTLQNLFWKKFGCDKCTG---DYSVCLD 186
            PV + D SNTIT+FT         LVLEFQKG LQNLFWK FGCD C G     SVCL+
Sbjct: 240 YPVKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLN 299

Query: 187 NQDCAVPNTKCKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVR 235
             DCAVP +KCK NGG  +CN+ IQ+AFSGTDRNLE LN+W+EV+NLR+YSL  L+++  
Sbjct: 300 GTDCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAV 359

[Close]

BLAST of MS020499 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-74
Identity = 131/240 (54.58%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 4   MAAMRTATMALAAMMLILVAEGTD------TNDVFSPCLDAKVQRSDGFTFGVAFSSKES 63
           M + +T T+ + + +++ VA G D      TN ++SPC D ++QRSDGFTFG+AFSS+ S
Sbjct: 1   MFSSKTLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPS 60

Query: 64  FFQDQ-IQFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQ 123
           FF +Q +  SPCDRRL LA+ N+Q  VFRP++D++SLL+IN++ F P  YGGYMVAFAG+
Sbjct: 61  FFINQTVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGR 120

Query: 124 KYAARSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYS-VCLDNQDCA 183
           KYAARS+P  I +++  +TSFTLV+EFQKG LQNL+WK+ GC  C G+ + VCL+ QDCA
Sbjct: 121 KYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCA 180

Query: 184 VPNTKCKFNGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
           +    CK  GG++DC+L IQLAFSGTD++L VLNSW+EV+NL++YSLY L+S+++ ++++
Sbjct: 181 IRTPSCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTN 240

[Close]

BLAST of MS020499 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 121/229 (52.84%), Postives = 171/229 (74.67%), Query Frame = 0


Query: 15  AAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFF----QDQIQFSPCDR 74
           AA++   + E  D N V+SPC D+ V   DGFTFG+AF++K+SFF       +Q+SPCD 
Sbjct: 12  AAVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDH 71

Query: 75  RLGLASKNAQLVVFRPRVDQLSLLTIN---STTFNPALYGGYMVAFAGQKYAARSLPVLI 134
           R    + N+++ VFRP+VD+++LLTIN   S++F P    GYMVAFAG KYAARSLP+++
Sbjct: 72  RHLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMV 131

Query: 135 TDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYS-VCLDNQDCAVPNTKCKFNGG 194
            D+++ +TSFTLVLEFQKG L+N+FWKK GC KC+GD   VCL+ ++CA+    CK  GG
Sbjct: 132 ADSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGG 191

Query: 195 SIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISD 236
            +DC+L IQLAFSGTD++   LNSW+EV NL++YSLY L+S+++D++++
Sbjct: 192 QVDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTN 240

[Close]

BLAST of MS020499 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 6.6e-06
Identity = 23/52 (44.23%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 109 YMVAFAGQKYAARSLPVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDK 161
           Y V   G +  +   P  I +++  +TSFT V+EFQKG LQNL+WK+  C K
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of MS020499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148528.1	2.1e-131	100.00	uncharacterized protein LOC111017155 [Momordica charantia]	[more]
XP_023513242.1	1.9e-108	80.00	uncharacterized protein LOC111777756 [Cucurbita pepo subsp. pepo] >XP_023521760....	[more]
XP_011649210.1	2.5e-108	81.90	uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharact...	[more]
XP_022986594.1	4.3e-108	79.57	uncharacterized protein LOC111484289 [Cucurbita maxima]	[more]
XP_022944397.1	2.1e-107	79.57	uncharacterized protein LOC111448855 [Cucurbita moschata]	[more]

BLAST of MS020499 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS020499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4C1	1.0e-131	100.00	uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1JGG7	2.1e-108	79.57	uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289...	[more]
A0A6J1FVK1	1.0e-107	79.57	uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A1S3CA87	1.3e-105	78.45	uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=...	[more]
A0A5D3CQC8	1.3e-105	78.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS020499 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15910.1	1.1e-77	56.97	CSL zinc finger domain-containing protein	[more]
AT3G44150.1	2.5e-74	54.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	1.6e-68	52.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48630.1	6.6e-06	44.23	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 5..239
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 5..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020499.1	MS020499.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
molecular_function	GO:0046872	metal ion binding