MS020472 (gene) Bitter gourd (TR) v1

Overview
NameMS020472
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPLATZ transcription factor family protein
Locationscaffold375: 449853 .. 452943 (-)
RNA-Seq ExpressionMS020472
SyntenyMS020472
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGCCGAGAAGGAGGAGAAATCGAATGGCCGCCATGGCTGGAACCTCTTCTCGGCACGAGCTTCTTCGTCCAATGCAAACTCCACGCCGATTCGCACAAAAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGAGCTCTCTGTTCGCTCTGTCTTGCTTCTCACAAAGATCACAGAGCAATTCAGGTACTCTCTTCTTCTTCTTCTGTAATTTCTTTGGATTCTTCGATCAGATTCGTGTTCGTGATCACGAAGAACATCAATTATTGGATCAAATGCCTTTTTTATTTTTGAAAGATCGAATTGTTTTTCTTTTTGGGATGAAGCCAATTTGGAAATTACTGTTCGTGACCTACTAACCGCAAGAAGCCAAAATGATCCTAACTATATAAACTGTGAAGACTCTTTTATCTTTTATTTTATTGTTTTATTCTTTTTTTTTTTCCCTTCTCTTTTTCAAACTGTTAAAAAGGNNNNNNNNNNAAATTTGGTATGGTTGGTTGTTAACGATTTCAAAAAGTTGCTTTTTTTTTTTTGTGTGGTACAAAGTTATTAAAAAAAAGAATTATGAAATATTTGTTTGAAGAAGCGAAAATTACTACTTAAAGTTATTGATTTTTGGAGGAAAACAACTTTTGAAGGTCTAATATATGAATTTTGAATTATAATTGTATTTAGTTTTGGTTGTCGATATTGTTACTTAATATTGATGTGTTACGCGTGTTAGATAAATGACGGAAAATAAGGGAACAGTAAAATTGATAAAGTAGCATGGAGACGAATACTTTTACTCATTTTTATATTACTAAAATATTGTTATTACCTTTTTTATAAATCTACCTAGATTTTTATGTGAGGAATTGCTTAAAATAATTATTAATTTGGTGTGAATGTATTACATTTTAGTTCATGTACATGATATTTTTTTATGAGTAAAATGTGCAAGGGTAAGAATTTAAACTTGCGATATTTTGATCGGATATAGATATCTAAACCACCTTGTAGGATTAAATTGGAACTAGAAATTTCTTAAATTTAGGAGGAGCTCAATCAATTAAAAGTAAAATAAATAAATAAATAAAACCTCTTGGAACCTTTGTTAACATTCATTTGAAAAAAGTGGTAGTAATAATGAAAAATGTGGAATTATGAATGGATGATAGATAAGAAGGTCATCGTACCATGATGTGATAAGGGTGTGTGAGATACAGAAATTTGTGGACATAACAGGAGTCCAGACTTACATCATAAACAGCGCCAGAATTGTGTTCTTGAACCACCGCCCTCACCCTCATCCACGTCCTCCCAATGCCACCACTGCCAAAGCTGCCACCAATGCCTGCCACGTCTGCCACCGTACCCTTCTTGATTCTTTCCTCTTCTGCTCTCTCGGTTGCAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCTTTTTCCTCTTCAAATTAATTGTTCTCAACTTTTATGTTATTTTAATTTGTTTTTGATATTTATTATGCGAAAAAATGATATAACATTCTTGTTTTTCTTTTAATAAAGAAAAATATAATTACTTTGGTAACTATTTCTTTCTTTTCTTTTTTTTTTATTGAAAATAAAGAGGTAAACCATGGATTTAAAATTTAAAAGTAAATATTTAATGTTTTTATGTTGTTGTTACTTTTTAATATTTGTTATGCTTTTTATATAAGTCAAGAATAGTAAAACAATATTTTTATTTATGTTTTGGAAACAATTAGAAACATGAATGAGAAATAAAAAACTTGTTTTTGCTATTTTCAAATATTTATATTTCTAAAAAATTAGAAACGAAAAAATGAGTATATCACCAAATAGATTTAAAAATTTTATTCTTTTTGTTTGAAATTTACCTTCTAACTCTAGCTGAATTGGTACGATGACTTATTTTACGTGTTATTGGCTTTGTTAAATTTTGACTCTTAGAAGACTACCTAAGATTATATGTCACATCTATAAGATTTACCTATCAATGGAGAGTGTTCGAAAAAAACCCTCAAAATACAAGGGTGTGGATTGCAGTATAGATAAATTATAAGAGTGTAACTTTCAATTAACTATTATAAAATAGTGTGGTCTCAATTTTCTTTTTCACCCCTAAACATTCTAATTGACTAGTTACATGTATATAGTTTCAATTTTGTTAAAAAAAAAAAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCCAAAACTATTAGGATGGTCATAATCAGAGTGTAGTTTCAAACTTTTGGTTTATAAATATTATTGCAACTGCTCCATCACTAAAATCAATTAATTTTTCATTAAATGCCAAAGAAAATCACAAAATCTACCCCTTCACCCAAAAGGTAATTATAATTTAATTCTTAAATTGTTATTTGAACTTAGTTCAACAATGATTGATATAAATGAGACTATGAATTTGAATCCCCATTTATATTTATGCTAATAAAATTTAATATCAGAGTTGTGGTTGTATGTTAAATTATAACTAAATAATGAAACGTAATTTGATTACTTAGACAATACTAAAATTAAACTGAATTATGATATATTGTGTAATATCTTAAAAAAGAGAAAAGGCAACAAAAAAATCCACTGTATATTTTGTTTTATTTAATTTTTAGTTTTAATAGGTTCGTAGTTTTTTTAAGACAGAGTCAAATATTTAAGGACTTTGAAAGTAAAAAAAAAAAGGTCTATTTAAGATTATTTAATGTTCTGAAGTGAATTTATTGGCCATAAATACAGCTTATTGGGACATCAAAGAGTTTGGAGAGAAAGTTGAAGGCGGTGGAAAACAGAAGCTCCGACACCGAGAAATCCAAGACCGCCACCGCCACCGCCACCGCCAACAGAAGAAGACTCAGAACCAAAATCCGAAGCTTCTCGCCGTCGACGCCGCCCCCCACGGCGGCGATTCACAGAACCGCCAAGAGAAGGAAGGGAACGCCGCACCGGTCTCCGATGGGAGGACTTCTCTTAGAATTT

mRNA sequence

GAAAGCCGAGAAGGAGGAGAAATCGAATGGCCGCCATGGCTGGAACCTCTTCTCGGCACGAGCTTCTTCGTCCAATGCAAACTCCACGCCGATTCGCACAAAAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGAGCTCTCTGTTCGCTCTGTCTTGCTTCTCACAAAGATCACAGAGCAATTCAGATAAGAAGGTCATCGTACCATGATGTGATAAGGGTGTGTGAGATACAGAAATTTGTGGACATAACAGGAGTCCAGACTTACATCATAAACAGCGCCAGAATTGTGTTCTTGAACCACCGCCCTCACCCTCATCCACGTCCTCCCAATGCCACCACTGCCAAAGCTGCCACCAATGCCTGCCACGTCTGCCACCGTACCCTTCTTGATTCTTTCCTCTTCTGCTCTCTCGGTTGCAAGCTTATTGGGACATCAAAGAGTTTGGAGAGAAAGTTGAAGGCGGTGGAAAACAGAAGCTCCGACACCGAGAAATCCAAGACCGCCACCGCCACCGCCACCGCCAACAGAAGAAGACTCAGAACCAAAATCCGAAGCTTCTCGCCGTCGACGCCGCCCCCCACGGCGGCGATTCACAGAACCGCCAAGAGAAGGAAGGGAACGCCGCACCGGTCTCCGATGGGAGGACTTCTCTTAGAATTT

Coding sequence (CDS)

GAAAGCCGAGAAGGAGGAGAAATCGAATGGCCGCCATGGCTGGAACCTCTTCTCGGCACGAGCTTCTTCGTCCAATGCAAACTCCACGCCGATTCGCACAAAAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGAGCTCTCTGTTCGCTCTGTCTTGCTTCTCACAAAGATCACAGAGCAATTCAGATAAGAAGGTCATCGTACCATGATGTGATAAGGGTGTGTGAGATACAGAAATTTGTGGACATAACAGGAGTCCAGACTTACATCATAAACAGCGCCAGAATTGTGTTCTTGAACCACCGCCCTCACCCTCATCCACGTCCTCCCAATGCCACCACTGCCAAAGCTGCCACCAATGCCTGCCACGTCTGCCACCGTACCCTTCTTGATTCTTTCCTCTTCTGCTCTCTCGGTTGCAAGCTTATTGGGACATCAAAGAGTTTGGAGAGAAAGTTGAAGGCGGTGGAAAACAGAAGCTCCGACACCGAGAAATCCAAGACCGCCACCGCCACCGCCACCGCCAACAGAAGAAGACTCAGAACCAAAATCCGAAGCTTCTCGCCGTCGACGCCGCCCCCCACGGCGGCGATTCACAGAACCGCCAAGAGAAGGAAGGGAACGCCGCACCGGTCTCCGATGGGAGGACTTCTCTTAGAATTT

Protein sequence

ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRRRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF
Homology
BLAST of MS020472 vs. NCBI nr
Match: XP_022148529.1 (uncharacterized protein LOC111017156 [Momordica charantia])

HSP 1 Score: 442.6 bits (1137), Expect = 2.0e-120
Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0

Query: 1   ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH 60
           ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH
Sbjct: 20  ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH 79

Query: 61  RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA 120
           RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA
Sbjct: 80  RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA 139

Query: 121 TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRR 180
           TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSK  TATATANRR
Sbjct: 140 TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSK--TATATANRR 199

Query: 181 RLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RLRTK+RSFSPSTPPPT AIHRTA+RRKGTP+RSPMGGLLLEF
Sbjct: 200 RLRTKLRSFSPSTPPPTVAIHRTARRRKGTPYRSPMGGLLLEF 240

BLAST of MS020472 vs. NCBI nr
Match: XP_023007528.1 (uncharacterized protein LOC111499992 [Cucurbita maxima])

HSP 1 Score: 361.7 bits (927), Expect = 4.6e-96
Identity = 184/224 (82.14%), Postives = 193/224 (86.16%), Query Frame = 0

Query: 1   ESREG-GEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKD 60
           E  EG GEIEWPPWLEPLL TSFFVQC  HADSHKSECNMYCLDCMNGALCSLCL SHKD
Sbjct: 18  EEEEGIGEIEWPPWLEPLLSTSFFVQCNHHADSHKSECNMYCLDCMNGALCSLCLNSHKD 77

Query: 61  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKA 120
           HRAIQIRRSSYHDVIRV EIQ+FVDITGVQTYIINSARIVFLN RP P P       AKA
Sbjct: 78  HRAIQIRRSSYHDVIRVSEIQRFVDITGVQTYIINSARIVFLNERPQPRP-------AKA 137

Query: 121 ATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANR 180
            TN CHVC R LLDSF FCSLGCKLIGTSKSL+++++AVEN SSDTEKSK    T  +NR
Sbjct: 138 LTNTCHVCRRALLDSFHFCSLGCKLIGTSKSLDKRVQAVENESSDTEKSK----TTKSNR 197

Query: 181 RRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RRL +KI+SFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF
Sbjct: 198 RRLGSKIQSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 230

BLAST of MS020472 vs. NCBI nr
Match: XP_023532500.1 (uncharacterized protein LOC111794643 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 6.0e-96
Identity = 182/223 (81.61%), Postives = 192/223 (86.10%), Query Frame = 0

Query: 1   ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH 60
           E    GEIEWPPWLEPLL TSFFVQC  HADSHKSECNMYCLDC+NGALCSLCL SHKDH
Sbjct: 24  EGEGEGEIEWPPWLEPLLSTSFFVQCNHHADSHKSECNMYCLDCVNGALCSLCLNSHKDH 83

Query: 61  RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA 120
           RAIQIRRSSYHDVIRV EIQ+FVDITGVQTYIINSARIVFLN RP P P       AKA 
Sbjct: 84  RAIQIRRSSYHDVIRVSEIQRFVDITGVQTYIINSARIVFLNERPQPRP-------AKAL 143

Query: 121 TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRR 180
           TN CHVC R LLDSF FCSLGCKLIGTSKSL+++++ VEN SSDTEKSKT   T + NRR
Sbjct: 144 TNTCHVCRRALLDSFHFCSLGCKLIGTSKSLDKRVQVVENESSDTEKSKT---TKSNNRR 203

Query: 181 RLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RLR+KI+SFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF
Sbjct: 204 RLRSKIQSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 236

BLAST of MS020472 vs. NCBI nr
Match: KAG6605136.1 (hypothetical protein SDJN03_02453, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035132.1 hypothetical protein SDJN02_01927 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.7 bits (914), Expect = 1.5e-94
Identity = 180/223 (80.72%), Postives = 188/223 (84.30%), Query Frame = 0

Query: 1   ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH 60
           E    GEIEWPPWLEPLL TSFFVQC  HADSHKSECNMYCLDCMNGALCSLCL SHKDH
Sbjct: 24  EGEGEGEIEWPPWLEPLLSTSFFVQCNHHADSHKSECNMYCLDCMNGALCSLCLNSHKDH 83

Query: 61  RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA 120
           RAIQIRRSSYHDVIRV EIQ+FVDITGVQTYIINSARIVFLN RP P P       AKA 
Sbjct: 84  RAIQIRRSSYHDVIRVSEIQRFVDITGVQTYIINSARIVFLNERPQPRP-------AKAL 143

Query: 121 TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRR 180
           TN CHVC R LLDSF FCSLGCKLIGTSKSL+++++ VEN SSDTEKSK    T  +NRR
Sbjct: 144 TNTCHVCRRALLDSFHFCSLGCKLIGTSKSLDKRVQVVENESSDTEKSK----TTKSNRR 203

Query: 181 RLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RLR KI+SFSP TPPPTAAIHRTAKRRKG PHRSPMGGLLLEF
Sbjct: 204 RLRRKIQSFSPPTPPPTAAIHRTAKRRKGIPHRSPMGGLLLEF 235

BLAST of MS020472 vs. NCBI nr
Match: XP_038902894.1 (uncharacterized protein LOC120089480 [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 4.3e-94
Identity = 182/225 (80.89%), Postives = 194/225 (86.22%), Query Frame = 0

Query: 1   ESREG-GEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKD 60
           E  EG  EIEWPPWLEPLL TSFFVQCK HADSHK+ECNMYCLDC+NGALCSLCL SHKD
Sbjct: 16  EEGEGESEIEWPPWLEPLLSTSFFVQCKHHADSHKTECNMYCLDCINGALCSLCLNSHKD 75

Query: 61  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKA 120
           HRAIQIRRSSYHDVIRVCEIQKF+DITGVQTYIINSARIVFLN RP P P       AKA
Sbjct: 76  HRAIQIRRSSYHDVIRVCEIQKFMDITGVQTYIINSARIVFLNQRPQPRP-------AKA 135

Query: 121 ATNACHVCHRTLLDSFLFCSLGCKLIGTSKSL-ERKLKAVENRSSDTEKSKTATATATAN 180
            TN C VCHR+LLDS+ FCSLGCKLIGTSK+  +R +K VEN SSDTEKSK    TAT+N
Sbjct: 136 LTNICLVCHRSLLDSYHFCSLGCKLIGTSKNFGKRVIKVVENESSDTEKSK----TATSN 195

Query: 181 RRRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RR+LR+KI+SFSPSTPPPTAA HRTAKRRKGTPHRSPMGGLLLEF
Sbjct: 196 RRKLRSKIQSFSPSTPPPTAATHRTAKRRKGTPHRSPMGGLLLEF 229

BLAST of MS020472 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.1e-27
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 0

Query: 8   IEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAIQIRR 67
           I+ P WL+ L    FFV C  H  + K+E N+ CLDC   +LC  C+ SH+ HR +Q+RR
Sbjct: 3   IQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRR 62

Query: 68  SSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNACHVC 127
             YHDV+R+ ++QK +D + VQ Y INSA++VF+  RP            K A N C  C
Sbjct: 63  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNR-------QFKGAGNYCTSC 122

Query: 128 HRTLLDSFLFCSLGCKL 145
            R+L + ++ CSLGCK+
Sbjct: 123 DRSLQEPYIHCSLGCKV 131

BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A6J1D497 (uncharacterized protein LOC111017156 OS=Momordica charantia OX=3673 GN=LOC111017156 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 9.9e-121
Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0

Query: 1   ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH 60
           ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH
Sbjct: 20  ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDH 79

Query: 61  RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA 120
           RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA
Sbjct: 80  RAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAA 139

Query: 121 TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRR 180
           TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSK  TATATANRR
Sbjct: 140 TNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSK--TATATANRR 199

Query: 181 RLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RLRTK+RSFSPSTPPPT AIHRTA+RRKGTP+RSPMGGLLLEF
Sbjct: 200 RLRTKLRSFSPSTPPPTVAIHRTARRRKGTPYRSPMGGLLLEF 240

BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A6J1L7W8 (uncharacterized protein LOC111499992 OS=Cucurbita maxima OX=3661 GN=LOC111499992 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.2e-96
Identity = 184/224 (82.14%), Postives = 193/224 (86.16%), Query Frame = 0

Query: 1   ESREG-GEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKD 60
           E  EG GEIEWPPWLEPLL TSFFVQC  HADSHKSECNMYCLDCMNGALCSLCL SHKD
Sbjct: 18  EEEEGIGEIEWPPWLEPLLSTSFFVQCNHHADSHKSECNMYCLDCMNGALCSLCLNSHKD 77

Query: 61  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKA 120
           HRAIQIRRSSYHDVIRV EIQ+FVDITGVQTYIINSARIVFLN RP P P       AKA
Sbjct: 78  HRAIQIRRSSYHDVIRVSEIQRFVDITGVQTYIINSARIVFLNERPQPRP-------AKA 137

Query: 121 ATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANR 180
            TN CHVC R LLDSF FCSLGCKLIGTSKSL+++++AVEN SSDTEKSK    T  +NR
Sbjct: 138 LTNTCHVCRRALLDSFHFCSLGCKLIGTSKSLDKRVQAVENESSDTEKSK----TTKSNR 197

Query: 181 RRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           RRL +KI+SFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF
Sbjct: 198 RRLGSKIQSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 230

BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A6J1G977 (uncharacterized protein LOC111451854 OS=Cucurbita moschata OX=3662 GN=LOC111451854 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94
Identity = 181/224 (80.80%), Postives = 189/224 (84.38%), Query Frame = 0

Query: 1   ESREG-GEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKD 60
           E  EG GEIEWPPWLEPLL TSFFVQC  HADSHKSECNMYCLDCMNGALCSLCL SHKD
Sbjct: 21  EEGEGEGEIEWPPWLEPLLSTSFFVQCNHHADSHKSECNMYCLDCMNGALCSLCLNSHKD 80

Query: 61  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKA 120
           HRAIQIRRSSYHDVIRV EIQ+FVDITGVQTYIINSARIVFLN RP P P       AKA
Sbjct: 81  HRAIQIRRSSYHDVIRVSEIQRFVDITGVQTYIINSARIVFLNERPQPRP-------AKA 140

Query: 121 ATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANR 180
            TN CHVC R LLDSF FCSLGCKLIGTSKSL+++++ VEN SSDTEKSK    T  +NR
Sbjct: 141 LTNTCHVCRRALLDSFHFCSLGCKLIGTSKSLDKRVQVVENESSDTEKSK----TTKSNR 200

Query: 181 RRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
            RLR KI+SFSP TPPPTAAIHRTAKRRKG PHRSPMGGLLLEF
Sbjct: 201 GRLRRKIQSFSPPTPPPTAAIHRTAKRRKGIPHRSPMGGLLLEF 233

BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A0A0LR17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93
Identity = 184/226 (81.42%), Postives = 193/226 (85.40%), Query Frame = 0

Query: 1   ESREG-GEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKD 60
           E  EG GEIEWPPWLEPLL TSFFVQCK HADSHKSECNMYCLDCMNGALCSLCL SHKD
Sbjct: 13  EEGEGEGEIEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLDCMNGALCSLCLNSHKD 72

Query: 61  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKA 120
           HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLN RP P P       +KA
Sbjct: 73  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERPQPRP-------SKA 132

Query: 121 ATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERK-LKAVENRSSDTEKSKTATATATAN 180
            TN C VCHR+LLDSF FCSLGCKLIGTSK+  +K +K VEN SSDTEKSK    T+ +N
Sbjct: 133 LTNICLVCHRSLLDSFHFCSLGCKLIGTSKNNGKKIIKVVENESSDTEKSK----TSGSN 192

Query: 181 RRR-LRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           R R LR+KI+SFSPSTPPPTAA HRTAKRRKGTPHRSPMGGLLLEF
Sbjct: 193 RGRILRSKIQSFSPSTPPPTAATHRTAKRRKGTPHRSPMGGLLLEF 227

BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A1S3C9J0 (uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93
Identity = 182/226 (80.53%), Postives = 194/226 (85.84%), Query Frame = 0

Query: 1   ESREG-GEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKD 60
           E  EG GEIEWPPWLEPLL T+FFVQCK HADSHKSECNMYCLDCMNGA+CSLCL SHKD
Sbjct: 13  EEGEGEGEIEWPPWLEPLLSTNFFVQCKNHADSHKSECNMYCLDCMNGAICSLCLNSHKD 72

Query: 61  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKA 120
           HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLN RP P P       +KA
Sbjct: 73  HRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERPQPRP-------SKA 132

Query: 121 ATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERK-LKAVENRSSDTEKSKTATATATAN 180
            TN C VCHR+LLDSF FCSLGCKLIGTSK+  +K +K VEN SSDTEKSK    T+++N
Sbjct: 133 LTNICLVCHRSLLDSFHFCSLGCKLIGTSKNYGKKIIKVVENESSDTEKSK----TSSSN 192

Query: 181 RRR-LRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           R R LR+KI+SFSPSTPPPTAA HRTAKRRKGTPHRSPMGGLLLEF
Sbjct: 193 RGRILRSKIQSFSPSTPPPTAATHRTAKRRKGTPHRSPMGGLLLEF 227

BLAST of MS020472 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-68
Identity = 131/214 (61.21%), Postives = 156/214 (72.90%), Query Frame = 0

Query: 10  WPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAIQIRRSS 69
           +P WL+PLL   FFVQCKLHADSHKSECNMYCLDC NG LCSLCL+ HKDH AIQIRRSS
Sbjct: 11  YPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSS 70

Query: 70  YHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNACHVCHR 129
           YHDVIRV EIQKF+DITGVQTY+INSA++VFLN RP P P        K   N C VC+R
Sbjct: 71  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRP-------GKGVINTCEVCYR 130

Query: 130 TLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRRRLRTKIRSF 189
           +L+DSF FCSLGCK+ G SK   +K K   N  SD++ S ++T+     ++       SF
Sbjct: 131 SLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDSDDSYSSTSIGRL-KKNDDIMNNSF 190

Query: 190 SPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF 224
           +PSTPP +A   R AKRRKG PHR+P GGL++E+
Sbjct: 191 TPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

BLAST of MS020472 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 251.5 bits (641), Expect = 6.2e-67
Identity = 132/216 (61.11%), Postives = 152/216 (70.37%), Query Frame = 0

Query: 4   EGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAI 63
           E  E  WPPWL+PLL   FFV CK H DSHKSECNMYCLDC NG LCSLCLA HKDHR I
Sbjct: 27  EEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTI 86

Query: 64  QIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNA 123
           QIRRSSYHDVIRV EIQK++DI G+QTY+INSA++VFLN RP P P        K  TN 
Sbjct: 87  QIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRP-------GKGVTNT 146

Query: 124 CHVCHRTLL-DSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRRRL 183
           C VC+R+L+ DSF FCSLGCK+ GTS+  E   K  EN   +TE S ++ A       + 
Sbjct: 147 CKVCYRSLVDDSFRFCSLGCKIAGTSRGFE---KGRENLLMETEDSSSSIAIG-----KN 206

Query: 184 RTKIRSFSPSTPPPTAAIH-RTAKRRKGTPHRSPMG 218
            T ++SFSPSTPP T + + R  KRRKG PHRSPMG
Sbjct: 207 ITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

BLAST of MS020472 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52
Identity = 108/185 (58.38%), Postives = 131/185 (70.81%), Query Frame = 0

Query: 39  MYCLDCMNGALCSLCLASHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARI 98
           MYCLDC NG LCSLCL+ HKDH AIQIRRSSYHDVIRV EIQKF+DITGVQTY+INSA++
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 99  VFLNHRPHPHPRPPNATTAKAATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAV 158
           VFLN RP P P        K   N C VC+R+L+DSF FCSLGCK+ G SK   +K K  
Sbjct: 61  VFLNERPQPRP-------GKGVINTCEVCYRSLVDSFRFCSLGCKISGISK---KKRKEW 120

Query: 159 ENRSSDTEKSKTATATATANRRRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGG 218
            N  SD++ S ++T+     ++       SF+PSTPP +A   R AKRRKG PHR+P GG
Sbjct: 121 TNNLSDSDDSYSSTSIGRL-KKNDDIMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPFGG 174

Query: 219 LLLEF 224
           L++E+
Sbjct: 181 LIIEY 174

BLAST of MS020472 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50
Identity = 114/239 (47.70%), Postives = 138/239 (57.74%), Query Frame = 0

Query: 11  PPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAIQIRRSSY 70
           PPWL P+L  S+FV C +H DS+K+ECN++CLDC   A CS CL  HKDHR +QIRRSSY
Sbjct: 16  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSY 75

Query: 71  HDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNACHVCHRT 130
           H+V+RV EIQKF+DI  VQTYIINSA+IVFLN RP P          K  TN C +C R+
Sbjct: 76  HNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR-------IGKGVTNTCEICCRS 135

Query: 131 LLDSFLFCSLGCKLIGTSK---SLERKLKAVENR----SSDTEKSKTATATATANR-RRL 190
           LLDSF FCSLGCKL G  +   SL   LK    R     S+++++ T T     N   RL
Sbjct: 136 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 195

Query: 191 RTKIR--------------------------SFSPSTPPPTAAIHRTAKRRKGTPHRSP 216
            + +                           SFSP TPP     HR + RRKG PHR+P
Sbjct: 196 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 245

BLAST of MS020472 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50
Identity = 114/239 (47.70%), Postives = 138/239 (57.74%), Query Frame = 0

Query: 11  PPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAIQIRRSSY 70
           PPWL P+L  S+FV C +H DS+K+ECN++CLDC   A CS CL  HKDHR +QIRRSSY
Sbjct: 13  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSY 72

Query: 71  HDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNACHVCHRT 130
           H+V+RV EIQKF+DI  VQTYIINSA+IVFLN RP P          K  TN C +C R+
Sbjct: 73  HNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR-------IGKGVTNTCEICCRS 132

Query: 131 LLDSFLFCSLGCKLIGTSK---SLERKLKAVENR----SSDTEKSKTATATATANR-RRL 190
           LLDSF FCSLGCKL G  +   SL   LK    R     S+++++ T T     N   RL
Sbjct: 133 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 192

Query: 191 RTKIR--------------------------SFSPSTPPPTAAIHRTAKRRKGTPHRSP 216
            + +                           SFSP TPP     HR + RRKG PHR+P
Sbjct: 193 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 242

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022148529.12.0e-12097.31uncharacterized protein LOC111017156 [Momordica charantia][more]
XP_023007528.14.6e-9682.14uncharacterized protein LOC111499992 [Cucurbita maxima][more]
XP_023532500.16.0e-9681.61uncharacterized protein LOC111794643 [Cucurbita pepo subsp. pepo][more]
KAG6605136.11.5e-9480.72hypothetical protein SDJN03_02453, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038902894.14.3e-9480.89uncharacterized protein LOC120089480 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q1G3Q46.1e-2743.07Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
A0A6J1D4979.9e-12197.31uncharacterized protein LOC111017156 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1L7W82.2e-9682.14uncharacterized protein LOC111499992 OS=Cucurbita maxima OX=3661 GN=LOC111499992... [more]
A0A6J1G9773.5e-9480.80uncharacterized protein LOC111451854 OS=Cucurbita moschata OX=3662 GN=LOC1114518... [more]
A0A0A0LR175.1e-9381.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1[more]
A0A1S3C9J05.1e-9380.53uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=... [more]
Match NameE-valueIdentityDescription
AT1G32700.11.5e-6861.21PLATZ transcription factor family protein [more]
AT4G17900.16.2e-6761.11PLATZ transcription factor family protein [more]
AT1G32700.21.5e-5258.38PLATZ transcription factor family protein [more]
AT1G21000.11.1e-5047.70PLATZ transcription factor family protein [more]
AT1G21000.21.1e-5047.70PLATZ transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..223
NoneNo IPR availablePANTHERPTHR31065:SF57PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 6..218
NoneNo IPR availablePANTHERPTHR31065PLATZ TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 6..218
IPR006734PLATZ transcription factorPFAMPF04640PLATZcoord: 66..144
e-value: 5.1E-29
score: 100.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020472.1MS020472.1mRNA