MS020472 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGCCGAGAAGGAGGAGAAATCGAATGGCCGCCATGGCTGGAACCTCTTCTCGGCACGAGCTTCTTCGTCCAATGCAAACTCCACGCCGATTCGCACAAAAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGAGCTCTCTGTTCGCTCTGTCTTGCTTCTCACAAAGATCACAGAGCAATTCAGGTACTCTCTTCTTCTTCTTCTGTAATTTCTTTGGATTCTTCGATCAGATTCGTGTTCGTGATCACGAAGAACATCAATTATTGGATCAAATGCCTTTTTTATTTTTGAAAGATCGAATTGTTTTTCTTTTTGGGATGAAGCCAATTTGGAAATTACTGTTCGTGACCTACTAACCGCAAGAAGCCAAAATGATCCTAACTATATAAACTGTGAAGACTCTTTTATCTTTTATTTTATTGTTTTATTCTTTTTTTTTTTCCCTTCTCTTTTTCAAACTGTTAAAAAGGNNNNNNNNNNAAATTTGGTATGGTTGGTTGTTAACGATTTCAAAAAGTTGCTTTTTTTTTTTTGTGTGGTACAAAGTTATTAAAAAAAAGAATTATGAAATATTTGTTTGAAGAAGCGAAAATTACTACTTAAAGTTATTGATTTTTGGAGGAAAACAACTTTTGAAGGTCTAATATATGAATTTTGAATTATAATTGTATTTAGTTTTGGTTGTCGATATTGTTACTTAATATTGATGTGTTACGCGTGTTAGATAAATGACGGAAAATAAGGGAACAGTAAAATTGATAAAGTAGCATGGAGACGAATACTTTTACTCATTTTTATATTACTAAAATATTGTTATTACCTTTTTTATAAATCTACCTAGATTTTTATGTGAGGAATTGCTTAAAATAATTATTAATTTGGTGTGAATGTATTACATTTTAGTTCATGTACATGATATTTTTTTATGAGTAAAATGTGCAAGGGTAAGAATTTAAACTTGCGATATTTTGATCGGATATAGATATCTAAACCACCTTGTAGGATTAAATTGGAACTAGAAATTTCTTAAATTTAGGAGGAGCTCAATCAATTAAAAGTAAAATAAATAAATAAATAAAACCTCTTGGAACCTTTGTTAACATTCATTTGAAAAAAGTGGTAGTAATAATGAAAAATGTGGAATTATGAATGGATGATAGATAAGAAGGTCATCGTACCATGATGTGATAAGGGTGTGTGAGATACAGAAATTTGTGGACATAACAGGAGTCCAGACTTACATCATAAACAGCGCCAGAATTGTGTTCTTGAACCACCGCCCTCACCCTCATCCACGTCCTCCCAATGCCACCACTGCCAAAGCTGCCACCAATGCCTGCCACGTCTGCCACCGTACCCTTCTTGATTCTTTCCTCTTCTGCTCTCTCGGTTGCAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCTTTTTCCTCTTCAAATTAATTGTTCTCAACTTTTATGTTATTTTAATTTGTTTTTGATATTTATTATGCGAAAAAATGATATAACATTCTTGTTTTTCTTTTAATAAAGAAAAATATAATTACTTTGGTAACTATTTCTTTCTTTTCTTTTTTTTTTATTGAAAATAAAGAGGTAAACCATGGATTTAAAATTTAAAAGTAAATATTTAATGTTTTTATGTTGTTGTTACTTTTTAATATTTGTTATGCTTTTTATATAAGTCAAGAATAGTAAAACAATATTTTTATTTATGTTTTGGAAACAATTAGAAACATGAATGAGAAATAAAAAACTTGTTTTTGCTATTTTCAAATATTTATATTTCTAAAAAATTAGAAACGAAAAAATGAGTATATCACCAAATAGATTTAAAAATTTTATTCTTTTTGTTTGAAATTTACCTTCTAACTCTAGCTGAATTGGTACGATGACTTATTTTACGTGTTATTGGCTTTGTTAAATTTTGACTCTTAGAAGACTACCTAAGATTATATGTCACATCTATAAGATTTACCTATCAATGGAGAGTGTTCGAAAAAAACCCTCAAAATACAAGGGTGTGGATTGCAGTATAGATAAATTATAAGAGTGTAACTTTCAATTAACTATTATAAAATAGTGTGGTCTCAATTTTCTTTTTCACCCCTAAACATTCTAATTGACTAGTTACATGTATATAGTTTCAATTTTGTTAAAAAAAAAAAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCCAAAACTATTAGGATGGTCATAATCAGAGTGTAGTTTCAAACTTTTGGTTTATAAATATTATTGCAACTGCTCCATCACTAAAATCAATTAATTTTTCATTAAATGCCAAAGAAAATCACAAAATCTACCCCTTCACCCAAAAGGTAATTATAATTTAATTCTTAAATTGTTATTTGAACTTAGTTCAACAATGATTGATATAAATGAGACTATGAATTTGAATCCCCATTTATATTTATGCTAATAAAATTTAATATCAGAGTTGTGGTTGTATGTTAAATTATAACTAAATAATGAAACGTAATTTGATTACTTAGACAATACTAAAATTAAACTGAATTATGATATATTGTGTAATATCTTAAAAAAGAGAAAAGGCAACAAAAAAATCCACTGTATATTTTGTTTTATTTAATTTTTAGTTTTAATAGGTTCGTAGTTTTTTTAAGACAGAGTCAAATATTTAAGGACTTTGAAAGTAAAAAAAAAAAGGTCTATTTAAGATTATTTAATGTTCTGAAGTGAATTTATTGGCCATAAATACAGCTTATTGGGACATCAAAGAGTTTGGAGAGAAAGTTGAAGGCGGTGGAAAACAGAAGCTCCGACACCGAGAAATCCAAGACCGCCACCGCCACCGCCACCGCCAACAGAAGAAGACTCAGAACCAAAATCCGAAGCTTCTCGCCGTCGACGCCGCCCCCCACGGCGGCGATTCACAGAACCGCCAAGAGAAGGAAGGGAACGCCGCACCGGTCTCCGATGGGAGGACTTCTCTTAGAATTT GAAAGCCGAGAAGGAGGAGAAATCGAATGGCCGCCATGGCTGGAACCTCTTCTCGGCACGAGCTTCTTCGTCCAATGCAAACTCCACGCCGATTCGCACAAAAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGAGCTCTCTGTTCGCTCTGTCTTGCTTCTCACAAAGATCACAGAGCAATTCAGATAAGAAGGTCATCGTACCATGATGTGATAAGGGTGTGTGAGATACAGAAATTTGTGGACATAACAGGAGTCCAGACTTACATCATAAACAGCGCCAGAATTGTGTTCTTGAACCACCGCCCTCACCCTCATCCACGTCCTCCCAATGCCACCACTGCCAAAGCTGCCACCAATGCCTGCCACGTCTGCCACCGTACCCTTCTTGATTCTTTCCTCTTCTGCTCTCTCGGTTGCAAGCTTATTGGGACATCAAAGAGTTTGGAGAGAAAGTTGAAGGCGGTGGAAAACAGAAGCTCCGACACCGAGAAATCCAAGACCGCCACCGCCACCGCCACCGCCAACAGAAGAAGACTCAGAACCAAAATCCGAAGCTTCTCGCCGTCGACGCCGCCCCCCACGGCGGCGATTCACAGAACCGCCAAGAGAAGGAAGGGAACGCCGCACCGGTCTCCGATGGGAGGACTTCTCTTAGAATTT GAAAGCCGAGAAGGAGGAGAAATCGAATGGCCGCCATGGCTGGAACCTCTTCTCGGCACGAGCTTCTTCGTCCAATGCAAACTCCACGCCGATTCGCACAAAAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGAGCTCTCTGTTCGCTCTGTCTTGCTTCTCACAAAGATCACAGAGCAATTCAGATAAGAAGGTCATCGTACCATGATGTGATAAGGGTGTGTGAGATACAGAAATTTGTGGACATAACAGGAGTCCAGACTTACATCATAAACAGCGCCAGAATTGTGTTCTTGAACCACCGCCCTCACCCTCATCCACGTCCTCCCAATGCCACCACTGCCAAAGCTGCCACCAATGCCTGCCACGTCTGCCACCGTACCCTTCTTGATTCTTTCCTCTTCTGCTCTCTCGGTTGCAAGCTTATTGGGACATCAAAGAGTTTGGAGAGAAAGTTGAAGGCGGTGGAAAACAGAAGCTCCGACACCGAGAAATCCAAGACCGCCACCGCCACCGCCACCGCCAACAGAAGAAGACTCAGAACCAAAATCCGAAGCTTCTCGCCGTCGACGCCGCCCCCCACGGCGGCGATTCACAGAACCGCCAAGAGAAGGAAGGGAACGCCGCACCGGTCTCCGATGGGAGGACTTCTCTTAGAATTT ESREGGEIEWPPWLEPLLGTSFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLASHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNHRPHPHPRPPNATTAKAATNACHVCHRTLLDSFLFCSLGCKLIGTSKSLERKLKAVENRSSDTEKSKTATATATANRRRLRTKIRSFSPSTPPPTAAIHRTAKRRKGTPHRSPMGGLLLEF Homology
BLAST of MS020472 vs. NCBI nr
Match: XP_022148529.1 (uncharacterized protein LOC111017156 [Momordica charantia]) HSP 1 Score: 442.6 bits (1137), Expect = 2.0e-120 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of MS020472 vs. NCBI nr
Match: XP_023007528.1 (uncharacterized protein LOC111499992 [Cucurbita maxima]) HSP 1 Score: 361.7 bits (927), Expect = 4.6e-96 Identity = 184/224 (82.14%), Postives = 193/224 (86.16%), Query Frame = 0
BLAST of MS020472 vs. NCBI nr
Match: XP_023532500.1 (uncharacterized protein LOC111794643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 361.3 bits (926), Expect = 6.0e-96 Identity = 182/223 (81.61%), Postives = 192/223 (86.10%), Query Frame = 0
BLAST of MS020472 vs. NCBI nr
Match: KAG6605136.1 (hypothetical protein SDJN03_02453, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035132.1 hypothetical protein SDJN02_01927 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 356.7 bits (914), Expect = 1.5e-94 Identity = 180/223 (80.72%), Postives = 188/223 (84.30%), Query Frame = 0
BLAST of MS020472 vs. NCBI nr
Match: XP_038902894.1 (uncharacterized protein LOC120089480 [Benincasa hispida]) HSP 1 Score: 355.1 bits (910), Expect = 4.3e-94 Identity = 182/225 (80.89%), Postives = 194/225 (86.22%), Query Frame = 0
BLAST of MS020472 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.1e-27 Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 0
BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A6J1D497 (uncharacterized protein LOC111017156 OS=Momordica charantia OX=3673 GN=LOC111017156 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 9.9e-121 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A6J1L7W8 (uncharacterized protein LOC111499992 OS=Cucurbita maxima OX=3661 GN=LOC111499992 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 2.2e-96 Identity = 184/224 (82.14%), Postives = 193/224 (86.16%), Query Frame = 0
BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A6J1G977 (uncharacterized protein LOC111451854 OS=Cucurbita moschata OX=3662 GN=LOC111451854 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94 Identity = 181/224 (80.80%), Postives = 189/224 (84.38%), Query Frame = 0
BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A0A0LR17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93 Identity = 184/226 (81.42%), Postives = 193/226 (85.40%), Query Frame = 0
BLAST of MS020472 vs. ExPASy TrEMBL
Match: A0A1S3C9J0 (uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93 Identity = 182/226 (80.53%), Postives = 194/226 (85.84%), Query Frame = 0
BLAST of MS020472 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.5e-68 Identity = 131/214 (61.21%), Postives = 156/214 (72.90%), Query Frame = 0
BLAST of MS020472 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein ) HSP 1 Score: 251.5 bits (641), Expect = 6.2e-67 Identity = 132/216 (61.11%), Postives = 152/216 (70.37%), Query Frame = 0
BLAST of MS020472 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein ) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52 Identity = 108/185 (58.38%), Postives = 131/185 (70.81%), Query Frame = 0
BLAST of MS020472 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50 Identity = 114/239 (47.70%), Postives = 138/239 (57.74%), Query Frame = 0
BLAST of MS020472 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50 Identity = 114/239 (47.70%), Postives = 138/239 (57.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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