MS020390 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGGCCGGTCAGCACCGACAAGCACGCGTGCTCCGACGCCGTCCTCTGCCACACGCAGATCCCCATATCGGCGGAGCCGCTCAGCAACAGGCGGCCGGCGGTGGCCAAACAGAGAATCGCAAGTTTATGGCCTCGCAGAGATCCGCTGTGCGACAGAGACTTCTCCCGCTCCCAGAAATTGACGAGTCCGTCGGAGGAGCCGCAGTACACAAACGACGCCTCCTCGTTGACGGCGAGAGCGGTGATGGCGCATTCCTGCTTCACCAGCGTCTGCGAGAAGAAATGTTTGGTTCCTTTACCTTGAAGCTCCCGCCGCCACACCTTGACGCTGCCGTCGGCGGATCCGGTGAACACCAATCCGTCGATACTGGAGACGAGAGTGTTGACGGCGTCGTCGTGAGCCTGAATCGATTCCAAACATTTCGAGTCGGAAACTCTCCAGACCTTGAA GTGGCCGGTCAGCACCGACAAGCACGCGTGCTCCGACGCCGTCCTCTGCCACACGCAGATCCCCATATCGGCGGAGCCGCTCAGCAACAGGCGGCCGGCGGTGGCCAAACAGAGAATCGCAAGTTTATGGCCTCGCAGAGATCCGCTGTGCGACAGAGACTTCTCCCGCTCCCAGAAATTGACGAGTCCGTCGGAGGAGCCGCAGTACACAAACGACGCCTCCTCGTTGACGGCGAGAGCGGTGATGGCGCATTCCTGCTTCACCAGCGTCTGCGAGAAGAAATGTTTGGTTCCTTTACCTTGAAGCTCCCGCCGCCACACCTTGACGCTGCCGTCGGCGGATCCGGTGAACACCAATCCGTCGATACTGGAGACGAGAGTGTTGACGGCGTCGTCGTGAGCCTGAATCGATTCCAAACATTTCGAGTCGGAAACTCTCCAGACCTTGAA GTGGCCGGTCAGCACCGACAAGCACGCGTGCTCCGACGCCGTCCTCTGCCACACGCAGATCCCCATATCGGCGGAGCCGCTCAGCAACAGGCGGCCGGCGGTGGCCAAACAGAGAATCGCAAGTTTATGGCCTCGCAGAGATCCGCTGTGCGACAGAGACTTCTCCCGCTCCCAGAAATTGACGAGTCCGTCGGAGGAGCCGCAGTACACAAACGACGCCTCCTCGTTGACGGCGAGAGCGGTGATGGCGCATTCCTGCTTCACCAGCGTCTGCGAGAAGAAATGTTTGGTTCCTTTACCTTGAAGCTCCCGCCGCCACACCTTGACGCTGCCGTCGGCGGATCCGGTGAACACCAATCCGTCGATACTGGAGACGAGAGTGTTGACGGCGTCGTCGTGAGCCTGAATCGATTCCAAACATTTCGAGTCGGAAACTCTCCAGACCTTGAA VAGQHRQARVLRRRPLPHADPHIGGAAQQQAAGGGQTENRKFMASQRSAVRQRLLPLPEIDESVGGAAVHKRRLLVDGESGDGAFLLHQRLREEMFGSFTLKLPPPHLDAAVGGSGEHQSVDTGDESVDGVVVSLNRFQTFRVGNSPDLE Homology
BLAST of MS020390 vs. NCBI nr
Match: QEX51262.1 (protein JINGUBANG-like isoform X3, partial [Cymbidium ensifolium]) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-10 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of MS020390 vs. NCBI nr
Match: KAF7828779.1 (uncharacterized protein G2W53_019943 [Senna tora]) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-07 Identity = 34/56 (60.71%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of MS020390 vs. NCBI nr
Match: QEX51263.1 (protein JINGUBANG-like isoform X4, partial [Cymbidium ensifolium]) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06 Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of MS020390 vs. ExPASy TrEMBL
Match: A0A5J6NB00 (Protein JINGUBANG-like isoform X3 (Fragment) OS=Cymbidium ensifolium OX=78740 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 9.6e-11 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of MS020390 vs. ExPASy TrEMBL
Match: A0A0D3CNY2 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08 Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of MS020390 vs. ExPASy TrEMBL
Match: A0A5J6N997 (Protein JINGUBANG-like isoform X4 (Fragment) OS=Cymbidium ensifolium OX=78740 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.9e-07 Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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