MS020302 (gene) Bitter gourd (TR) v1

Overview
NameMS020302
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA-binding KH domain-containing protein
Locationscaffold665: 840956 .. 846114 (-)
RNA-Seq ExpressionMS020302
SyntenyMS020302
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGTGGCCTGGATGGCCTGGGGAGAATGTATTCAGGATGTTGGTTCCCATACAAAAGGTTGGCAGTATCATAGGTCGCAAGGGAGAGTACATTAAAAAAATCAATGAGGAGACTAGAGCTCGCATCAAAATTCTTGATGGTCCTCCCGGGACATTAGTTAGAGCAGTGAGTTTTTATCTTATTTTATTTTTAGGTTTTCAGTGTGTAACACAGTTTTTATAAAAACTTGTGCACCCTCTGTCTATTTAAATTATTATTTCTTTTATTTAGAGTTTTATATGTTGCTGATGTCTGTATTTAATATACAATACAGGAATTACTCATTTTATAAGCCCAGTGAAATTATTAGTTTCCTGTGTTTGTTTGTTGAAATATGCTTTCTCCCATTATCTGTGTATGAAATTATGTTTTTCTTAGCAAAAATTGGCTACACACCAGAAGGTAAGTGCTTTTTGATGTGTCATGTTTTTATTAGATCTAACATATTAGTTTGGTTCATGAGTTTATTAAATTTAAGTATAATTTTAATAAATTAATAATTTCAACTTGGACTACTATCATTATTAATTTCTTGTTTGAGTACTGGTTGTTGGCCTATGCCCATGAAAGTACTAGTTATGTAATTATTACATAAAATTAGTTCGTTTTCTTTAGGAACTAAAAGCTGAGGGACTGATAACAAGAAAAGTAGTTTGAAAATAGAAAGAGTCCTGGGTTGATGACTCTGAGGGAAGTTGTGAACAAAGTTTAATGGGGAACAAGGAAAGATAGAAAATACAACTTGGAAATGTATGATAAACAACAAGAGGCTAAATCTTACACAGAAGTATGCTTTACTAAAGTAACAAAAATAAGCATGTGCAGGTTCCAAATTGTGATTAAAGTTGTGGAGTTTACCTCATAGGTGGTGTTGAAAACTTTCTTTTTCCAAACCATCACAAATGGGTTTTGCAGGATCTGGTTTCCTGAAGCTTTTGCTTTCTATTAATGCATAAGTTGATCAAACAGCATCTTGCCACAATCCACGTTGTTGTTTGGTACTGCTATAAACTTCTCATAAATGTCTGGACTGTTCATATTAAAATGTGAAGTGGCTTTTCAACTCTGTTTCCCATATTATGCAAGTAGCACACACCATTATAAACTGAGCTATGATGTTGATATTAATCACTTAGCAACTAACATATTGCAAATGGTTCCAACTCTTGTTGAACTTTTATATTCTCACTTTTGAGTTGAATGTCAAGGTAGAATGTTTTTACAGAGATATATATAATACTAAAAATGCTTGCAAGGTAAATTTGAAAATGACATATATACTTATATTGACGAACTTGATTGAATACTCCACATTTTAATGGTAGGTACAAGTTATTGTATGTGCTGCTGAATTTAGTATTTGGATGTAGGGAAAGCCACTCTAGAAGTGCATATGGGTCATCCTTCTAGGAGAAAAGGCTAGAATTTTGTTAACTAACGTTTCTAAATTCTTCAGTTTGGAATTGACCTTAGAAAAATAGGATAACTTTTGAAACTTTGATTGGTATTAGATGGCTTTTCGTGACTTAGTTTGCTTGTGGCGTCCACTTAGAGTTCCCTTTTGAAATATTATTGTTGTCATACCTGGCTAATATTAATGTCAGTTGAAGTGTTTTTCTTGAGCTCCTAGGTTTAGGTTTGGAAGAACATCTTATCTTCCTGTTTACTTGTATATTTTCCCCCTTCAGTGGAAGTGTTTCTTATAAAGAAAAGAAAAGAAACGTTTCATGTAGCATTTAAGATGAGTTACATTGGTCAGAATATTTATTGCAAACGGGCTCAGTATTGGTTTCGTAATCCTAGCAATAGTATTAACTTCCTGGCGCAACTTTATTGTTACTCATTCAAACACTGATGATCTCTTTACCCAACAAAGAATGATGTAATAGACTTGGCAATTTATTTTATTTTGTATGTACATGTCAGTTTAAATTATAGTTGGACCAGTTGTATTGGATCTAAATTTTTGGCTGGCTCAGTAATGCACTCTTCCCCCTCTTTTGATGCCATTTCAAGGTCATAGTGTCTGCCAAAGAAGATCTAGAATTGCCAGTTTCTCCTGCAATGGATGCTTTACTGAGAGTTCACCAAAAGGTGGTTGACATAGATAACAATTATTCTCAAGCTACATCAAATGCAGGGGGCAAGGTTATCACAAGGCTTCTTGTTGCACATGCACAGGGAGCAATCTTAATTGGGAAGCAGGGTTCCACTGTAAAATCCATCCAAGATGCTTCAAATTGTTCCATAAGAGTTCTTGGAGCAGGTGTGGTGATATGAAGTTAAGTACTATATTAGAAATCATGGTGATGAAATAAACTTTTTATGTCTGTCTTTTTTCTCAACTAAAAGCCTAACTAGTATCCAGGAGTTGCAATTCTCGTACTAGTCTTTCAATCTATTTCCACCAGCACATTTAGTACGCCTCTTTTGATGAGAATGATATTTCACTGTTCTATGATGGATTTTTCATTCTCTCTTGTATTTGACATTGAAATTTCCTTGCCCTGGTTTTGTACTTTTTCACTGATTTTGCTATTCTGATGGTGTTATCATCTGCCTCATTCATTATGTCATGTTTTTTTGGCTACTAACCAACTTGTAACATCTTGCCTTCTAAATTTTCAGAATATCAATAATTTCACTAGCCTTTTATATTGATTTTAACCATGTTGTAATTTGTAAATTGTACTCTTTGTTTAGTAGTAATGTGAATGTAAAAATAATTTACTGCAGAACACCTCCCGTCTTTTGCTCTGCAAGATGACAGTATTGTTGAGATACAGGGGGAATCTGCTGCCGTTCATAAAGCAGTTGAATTAATTACTAGTCATCTACGGAAGTTTCTAGTTGACCACAGTATAGTTAGTGTTTTTGAAACGCAAGTAAGTCTATTTTTTGACTAGTTTTCATTATTTTTGAAATTGTAAAGTTAGAAAATGTTCAGAACGGATGGATATTGCTTATCTGGATTGAAAATAGAAGATTTGAAGATAGGGATTATGATCTGGATCTTATTCATGAAACTGTACACCATACCATTTGGAAGTCTAGTGGTTGAAGTTGAATATCCAGAGACTTTGGTAGCTATAGTACCTAGACTAAGATGCAACTTTTGAATCAGAAAATGACAGAAGAATTGGATAAGGTCTTAGGTGTGTGTGTATATTTATATATACCTATAGGGATGAAGATTTGAACCTCCAGTCTTTCGGTCGAGCATATATGCCTTAAAGCCCCTTAACTAGTTGAGCTATGTTGGCAAAATAAGAGCATGCTTTATAAAGTCGAGAATTTCATAAACGGTCGCATCATTTGTGTGGTTTACAGTTTATTTTAAGACCATTTAATATTGAAGTCTTAACTATTTTCAGAGTCAATATCTTGACCTGATAGATAGAAATATATTTAGTAGTTCCAAGTTGTTCAACTTCCTTCGCTTCTAATTTTCTAATTCCTTATCAACTGGATTGTTTATGATTTTCAATATATTGATGATTTTCTAATTCCTTATCAAATATATTTTTATTTTGCTCATTATGATTAGTTAGACTGTCTAGTTTCTGCATCATTTGAACAACTTCTGCATTTGTGTTGTATGACTTCGGTATACCACCACAGTTTGATTGTAATTGTGTTTTTGGAAGCGAAATTTAAGATACTGACAAGTTTTAGTTTCTAATTCAATTGCTACAACAGTATGCATGATGTGTAGTTATCATTGTTTAGATGCAGATGCTACAATCTAAGCAGAACATCTTCCCACAGACCAAGGACCTGTGTCCTGACTGGCTTCCAACTTATAATGATTTTATACCTGGCTTTGAACCCCATACTCAGTACGACCAGGGTCCAGATCAGTATTGGAAGTACATATCACCACCTGATTTGTGCCTGGACAAGCAGTCTCATCAGGGTCCTGTATTTGGGAGGGACGCTGGAGTTCATTTTACCAGTTTGCAACCACGACAATCATTAGTCACAAAGGTATCTTGATTTTATTTTTCTTTATTCTTTGGTAGCAAGTTCGTTTTATGTTAATCTTCAATTATGCTACTAGATTATGAATGAGGTATTATTCTCATGGAGGACATCATATTTTTCAATTATACTAGTTTGTTTAATTTAGACCATTAGATGAAACTCTACATACTGTTTTTTTTTTCTGATAAGAAACATCAAAAAGGTATATAGAAAAGGGGAAGGTCCCCAAAAAGATACAGCCTAAAGGCGGAGGGTAGAGAAAATCCTCCCCTCAAAACTTTTTGAGTCAAAAGAAAGAAGCAAATCTGCAGTGCAATGGAGTCTATAAGCCAAACGGCCACTACTTCTTCAAGGGTAATTGTGAAGCTCCGTCGTAGGTGGAATTCCTCAACTAAGACAACTCTTCCTTTACTTCTTGAGTCAAAAGAAACTTTGAAGGACTTGTTTTCAATCTTGGTAGACAGCCACCGTGAAGCCATGGCAGAAGCAAAGCCGGCGGCAGTTAGGGGGAGAGCAATCTCAACTGAACAAGTTTCTCATAGTTTTCCAATCCTTTATACAAACTCTACATACTGTTTTGCTAAGATGTCACCTCTCCCTTTGATCCTTTCAATGTTACCCTTTGTGAATTTTAATTCGAGTATTCTGCTCTATCTGCCTAAAATTAAATTTATAAGCTAAGGTTGTTGCTAGAAACTAATTGTTTCCTCTGTGTTTCATAGATTGTACTATTGTTAATAATAGATGTAATATTTAATATGTTGAAGCACCATTCGAATAGGGTGATTTTAAATTTAGGCCTACGGGCATGTAGTACTGTTTATTAACATATCTTGGCTTATTAATTTCTAAAAGACATCTGTAACCTGACATAATTGTAGGTAAGACTTATTATTGTGAGAATTCAACTCAATCTCTTTTTCTTGTTTCTTGTTCAGGTTGAACTCTGCATGCAAATTCCACTTTCATACGCAGATTCTGTTATTGGGATGTCCGGTGTAAATATAAGCTACATACGTCGGACCAGTGGGGCATCTGTTGCAATCCAAGAAACAAAAGGTGTTCCTGGGGAGATGACCATTGAAATAACTGGAACTCCTTTACAAGTACAAGCAGCTCAACAGTTGATACAG

mRNA sequence

AAGAAGTGGCCTGGATGGCCTGGGGAGAATGTATTCAGGATGTTGGTTCCCATACAAAAGGTTGGCAGTATCATAGGTCGCAAGGGAGAGTACATTAAAAAAATCAATGAGGAGACTAGAGCTCGCATCAAAATTCTTGATGGTCCTCCCGGGACATTAGTTAGAGCAGTCATAGTGTCTGCCAAAGAAGATCTAGAATTGCCAGTTTCTCCTGCAATGGATGCTTTACTGAGAGTTCACCAAAAGGTGGTTGACATAGATAACAATTATTCTCAAGCTACATCAAATGCAGGGGGCAAGGTTATCACAAGGCTTCTTGTTGCACATGCACAGGGAGCAATCTTAATTGGGAAGCAGGGTTCCACTGTAAAATCCATCCAAGATGCTTCAAATTGTTCCATAAGAGTTCTTGGAGCAGAACACCTCCCGTCTTTTGCTCTGCAAGATGACAGTATTGTTGAGATACAGGGGGAATCTGCTGCCGTTCATAAAGCAGTTGAATTAATTACTAGTCATCTACGGAAGTTTCTAGTTGACCACAGTATAGTTAGTGTTTTTGAAACGCAACAGAACATCTTCCCACAGACCAAGGACCTGTGTCCTGACTGGCTTCCAACTTATAATGATTTTATACCTGGCTTTGAACCCCATACTCAGTACGACCAGGGTCCAGATCAGTATTGGAAGTACATATCACCACCTGATTTGTGCCTGGACAAGCAGTCTCATCAGGGTCCTGTATTTGGGAGGGACGCTGGAGTTCATTTTACCAGTTTGCAACCACGACAATCATTAGTCACAAAGGTTGAACTCTGCATGCAAATTCCACTTTCATACGCAGATTCTGTTATTGGGATGTCCGGTGTAAATATAAGCTACATACGTCGGACCAGTGGGGCATCTGTTGCAATCCAAGAAACAAAAGGTGTTCCTGGGGAGATGACCATTGAAATAACTGGAACTCCTTTACAAGTACAAGCAGCTCAACAGTTGATACAG

Coding sequence (CDS)

AAGAAGTGGCCTGGATGGCCTGGGGAGAATGTATTCAGGATGTTGGTTCCCATACAAAAGGTTGGCAGTATCATAGGTCGCAAGGGAGAGTACATTAAAAAAATCAATGAGGAGACTAGAGCTCGCATCAAAATTCTTGATGGTCCTCCCGGGACATTAGTTAGAGCAGTCATAGTGTCTGCCAAAGAAGATCTAGAATTGCCAGTTTCTCCTGCAATGGATGCTTTACTGAGAGTTCACCAAAAGGTGGTTGACATAGATAACAATTATTCTCAAGCTACATCAAATGCAGGGGGCAAGGTTATCACAAGGCTTCTTGTTGCACATGCACAGGGAGCAATCTTAATTGGGAAGCAGGGTTCCACTGTAAAATCCATCCAAGATGCTTCAAATTGTTCCATAAGAGTTCTTGGAGCAGAACACCTCCCGTCTTTTGCTCTGCAAGATGACAGTATTGTTGAGATACAGGGGGAATCTGCTGCCGTTCATAAAGCAGTTGAATTAATTACTAGTCATCTACGGAAGTTTCTAGTTGACCACAGTATAGTTAGTGTTTTTGAAACGCAACAGAACATCTTCCCACAGACCAAGGACCTGTGTCCTGACTGGCTTCCAACTTATAATGATTTTATACCTGGCTTTGAACCCCATACTCAGTACGACCAGGGTCCAGATCAGTATTGGAAGTACATATCACCACCTGATTTGTGCCTGGACAAGCAGTCTCATCAGGGTCCTGTATTTGGGAGGGACGCTGGAGTTCATTTTACCAGTTTGCAACCACGACAATCATTAGTCACAAAGGTTGAACTCTGCATGCAAATTCCACTTTCATACGCAGATTCTGTTATTGGGATGTCCGGTGTAAATATAAGCTACATACGTCGGACCAGTGGGGCATCTGTTGCAATCCAAGAAACAAAAGGTGTTCCTGGGGAGATGACCATTGAAATAACTGGAACTCCTTTACAAGTACAAGCAGCTCAACAGTTGATACAG

Protein sequence

KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVSAKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQGSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDHSIVSVFETQQNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISPPDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Homology
BLAST of MS020302 vs. NCBI nr
Match: XP_022145988.1 (flowering locus K homology domain-like isoform X1 [Momordica charantia] >XP_022145989.1 flowering locus K homology domain-like isoform X1 [Momordica charantia])

HSP 1 Score: 656.0 bits (1691), Expect = 1.8e-184
Identity = 331/340 (97.35%), Postives = 332/340 (97.65%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKIL+GPPGTLVRAVIVS
Sbjct: 53  KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILNGPPGTLVRAVIVS 112

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG
Sbjct: 113 AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 172

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH
Sbjct: 173 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 232

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SIVSVFETQ       QNIFPQTKDLCP WLPTYNDFIPGFEPHTQYDQGPDQYWKYISP
Sbjct: 233 SIVSVFETQMQMLQSKQNIFPQTKDLCPVWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 292

Query: 241 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 300
           PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY
Sbjct: 293 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 352

Query: 301 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Sbjct: 353 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 392

BLAST of MS020302 vs. NCBI nr
Match: XP_022145990.1 (flowering locus K homology domain-like isoform X2 [Momordica charantia] >XP_022145991.1 flowering locus K homology domain-like isoform X2 [Momordica charantia])

HSP 1 Score: 656.0 bits (1691), Expect = 1.8e-184
Identity = 331/340 (97.35%), Postives = 332/340 (97.65%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKIL+GPPGTLVRAVIVS
Sbjct: 36  KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILNGPPGTLVRAVIVS 95

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG
Sbjct: 96  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 155

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH
Sbjct: 156 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 215

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SIVSVFETQ       QNIFPQTKDLCP WLPTYNDFIPGFEPHTQYDQGPDQYWKYISP
Sbjct: 216 SIVSVFETQMQMLQSKQNIFPQTKDLCPVWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 275

Query: 241 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 300
           PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY
Sbjct: 276 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 335

Query: 301 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Sbjct: 336 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 375

BLAST of MS020302 vs. NCBI nr
Match: XP_022145993.1 (flowering locus K homology domain-like isoform X3 [Momordica charantia])

HSP 1 Score: 585.5 bits (1508), Expect = 2.9e-163
Identity = 302/340 (88.82%), Postives = 303/340 (89.12%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKIL+GPPGTLVRAVIVS
Sbjct: 53  KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILNGPPGTLVRAVIVS 112

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKEDLELPVSPAMDALLRVHQK                             GAILIGKQG
Sbjct: 113 AKEDLELPVSPAMDALLRVHQK-----------------------------GAILIGKQG 172

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH
Sbjct: 173 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 232

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SIVSVFETQ       QNIFPQTKDLCP WLPTYNDFIPGFEPHTQYDQGPDQYWKYISP
Sbjct: 233 SIVSVFETQMQMLQSKQNIFPQTKDLCPVWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 292

Query: 241 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 300
           PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY
Sbjct: 293 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 352

Query: 301 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Sbjct: 353 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 363

BLAST of MS020302 vs. NCBI nr
Match: XP_030967387.1 (flowering locus K homology domain-like isoform X2 [Quercus lobata])

HSP 1 Score: 425.2 bits (1092), Expect = 5.0e-115
Identity = 221/342 (64.62%), Postives = 260/342 (76.02%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVP+QKVG IIGRKGE+IKKI EET+AR+KILDGPPGT  RAV+VS
Sbjct: 38  KKWPGWPGENVFRMLVPVQKVGGIIGRKGEFIKKITEETKARVKILDGPPGTSERAVMVS 97

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKE+L LP+SPAMDALLRVH++++D+D N + ATS A G +ITR+LVA  Q   LIGKQG
Sbjct: 98  AKEELNLPLSPAMDALLRVHKQIIDVDTNSAHATSGAVGTIITRVLVADTQAGSLIGKQG 157

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           ST+KSIQDASNC+IRVL AEHLP F L+DDSIVE+ GE A VHKAVELI +HLRKFLVD 
Sbjct: 158 STIKSIQDASNCTIRVLSAEHLPEFVLKDDSIVEVHGEPAGVHKAVELILNHLRKFLVDR 217

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SI+ VFE Q       QNI P      P   P      P F P+ QY Q P QY  Y+  
Sbjct: 218 SIIGVFEMQMPKFQANQNIPPHQSWGPPQGFPINAGAGPDFAPNPQYVQPPHQYDNYLPA 277

Query: 241 PDLCLDKQSHQGPVFGRDA--GVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNI 300
           P   LD Q  QGP++GRDA  G+H +S+QP+Q + TKV   MQ+PL Y D+VIG+SG NI
Sbjct: 278 PP--LDNQHWQGPMYGRDASMGIHLSSVQPQQLVATKVTHHMQVPLLYTDAVIGISGSNI 337

Query: 301 SYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           SYIRR SGA++AIQET+G+P EMT+EI G+  QVQ AQQLIQ
Sbjct: 338 SYIRRASGATIAIQETRGMPEEMTVEINGSASQVQTAQQLIQ 377

BLAST of MS020302 vs. NCBI nr
Match: XP_030967386.1 (flowering locus K homology domain-like isoform X1 [Quercus lobata])

HSP 1 Score: 424.5 bits (1090), Expect = 8.6e-115
Identity = 221/344 (64.24%), Postives = 260/344 (75.58%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVP+QKVG IIGRKGE+IKKI EET+AR+KILDGPPGT  RAV+VS
Sbjct: 38  KKWPGWPGENVFRMLVPVQKVGGIIGRKGEFIKKITEETKARVKILDGPPGTSERAVMVS 97

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKE+L LP+SPAMDALLRVH++++D+D N + ATS A G +ITR+LVA  Q   LIGKQG
Sbjct: 98  AKEELNLPLSPAMDALLRVHKQIIDVDTNSAHATSGAVGTIITRVLVADTQAGSLIGKQG 157

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           ST+KSIQDASNC+IRVL AEHLP F L+DDSIVE+ GE A VHKAVELI +HLRKFLVD 
Sbjct: 158 STIKSIQDASNCTIRVLSAEHLPEFVLKDDSIVEVHGEPAGVHKAVELILNHLRKFLVDR 217

Query: 181 SIVSVFETQ---------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYI 240
           SI+ VFE Q         QNI P      P   P      P F P+ QY Q P QY  Y+
Sbjct: 218 SIIGVFEMQMQMPKFQANQNIPPHQSWGPPQGFPINAGAGPDFAPNPQYVQPPHQYDNYL 277

Query: 241 SPPDLCLDKQSHQGPVFGRDA--GVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGV 300
             P   LD Q  QGP++GRDA  G+H +S+QP+Q + TKV   MQ+PL Y D+VIG+SG 
Sbjct: 278 PAPP--LDNQHWQGPMYGRDASMGIHLSSVQPQQLVATKVTHHMQVPLLYTDAVIGISGS 337

Query: 301 NISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           NISYIRR SGA++AIQET+G+P EMT+EI G+  QVQ AQQLIQ
Sbjct: 338 NISYIRRASGATIAIQETRGMPEEMTVEINGSASQVQTAQQLIQ 379

BLAST of MS020302 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 6.2e-92
Identity = 197/352 (55.97%), Postives = 238/352 (67.61%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           K+WPGWPGE VFRMLVP QKVGSIIGRKG+ IKKI EETRARIKILDGPPGT  RAV+VS
Sbjct: 178 KRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVS 237

Query: 61  AKEDLELPVSPAMDALLRVHQKVVD-IDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQ 120
            KE+ E  + P+MD LLRVH ++VD +D   SQA   +  KV TRLLV  +Q   LIGKQ
Sbjct: 238 GKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS--KVSTRLLVPASQAGSLIGKQ 297

Query: 121 GSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVD 180
           G TVK+IQ+AS C +RVLG+E LP FALQDD +VE+ GE  +VH+A+ELI SHLRKFLVD
Sbjct: 298 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVD 357

Query: 181 HSIVSVFETQQNIFPQTKDLCPDWLPTYNDFIP--GFEPHT----------QYDQGPDQY 240
            SI+  FE Q     +  D  P   P +  + P  G  P             Y Q P ++
Sbjct: 358 RSIIPFFENQMQKPTRQMDHMP---PPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRH 417

Query: 241 WKYISPPDL---CLDKQSHQG-PVFGRD--AGVHFTSLQPRQSLVTKVELCMQIPLSYAD 300
             Y  PP++    ++KQ HQG   +GR+    VH +S  P   +  +V   MQIPLSYAD
Sbjct: 418 DSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPP--MVAQQVTQQMQIPLSYAD 477

Query: 301 SVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           +VIG SG NISY RR SGA+V IQET+GVPGEMT+E++GT  QVQ A QLIQ
Sbjct: 478 AVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQ 522

BLAST of MS020302 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.9e-67
Identity = 156/358 (43.58%), Postives = 212/358 (59.22%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           ++WPGWPG+ VFRM+VP+ KVG+IIGRKG++IKK+ EETRARIK+LDGP  T  R V++S
Sbjct: 65  ERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLIS 124

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVIT-RLLVAHAQGAILIGKQ 120
            KE+ E  +SPAMDA+LRV ++V  + +N      NAG    + RLLVA  Q   LIGKQ
Sbjct: 125 GKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQ 184

Query: 121 GSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVD 180
           GS +KSI + S  S+R+L  E  P +A QD+ IV++QGE+  + KA+E I  HLR+FLVD
Sbjct: 185 GSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVD 244

Query: 181 HSIVSVFETQQNI-FPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISPPDLCL 240
           H++V +FE Q      QT+                 EP  +           +  PD  L
Sbjct: 245 HTVVPLFEKQYLARVSQTRQ---------------EEPLAESKSSLHTISSNLMEPDFSL 304

Query: 241 DKQSHQGPVF-GRD---------AGVHFTSLQP-------------RQSLVTKVELCMQI 300
              + + P+F  RD         +GV   S  P               + VT+V   MQI
Sbjct: 305 --LARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQI 364

Query: 301 PLSYADSVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           P SYA+ +IG+ G NI+YIRR SGA++ I+E+   P ++T+EI GT  QVQ A+QLIQ
Sbjct: 365 PFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQ 404

BLAST of MS020302 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.0e-19
Identity = 97/336 (28.87%), Postives = 152/336 (45.24%), Query Frame = 0

Query: 11  VFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIV--SAKEDLE-- 70
           V+R+L PI  VG +IG+ G+ I  I   T+A+IK+ D   G   R + +  S KE  E  
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 71  -------LPVSPAMDALLRVHQKVVDID-NNYSQATSNAGGKVITRLLVAHAQGAILIGK 130
                   P+  A DALL+V+  +V  D  N ++   +       RLLV  +Q + LIGK
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156

Query: 131 QGSTVKSIQDASNCSIRVLGAE-HLPSF--ALQDDSIVEIQGESAAVHKAVELITSHLRK 190
            G  +K I+  +  S++V+  +   PS   A++ D++V I GE  +V +A+  +++ + K
Sbjct: 157 AGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYK 216

Query: 191 FLVDHSIVSVFETQQNIFPQTKDLCPDWLPT----YNDFIPGFEPHTQYDQGPDQYWKYI 250
            +     + +  T Q++ P    + P  L         F    +   Q   G   Y+  +
Sbjct: 217 -INPRENIPLDSTSQDV-PAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL 276

Query: 251 SPPDL--CLDKQSHQGPVFGRDAGV--HFTSLQPRQSLVTKVELCMQIPLSYADSVIGMS 310
           S  D     +  ++  PVF     V   F      + LV KV LC   PL     VIG  
Sbjct: 277 SVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKV-LC---PLCNIMRVIGKG 336

Query: 311 GVNISYIRRTSGASVAIQE--TKGVPGEMTIEITGT 322
           G  I  IR  SG+ + + +  TK    E  I +T T
Sbjct: 337 GSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 366

BLAST of MS020302 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.6e-16
Identity = 84/329 (25.53%), Postives = 144/329 (43.77%), Query Frame = 0

Query: 9   ENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVSAKEDLELP 68
           E VF++L P  K+  ++G     I  +  E    +++ D   G+  + + +S++E  + P
Sbjct: 324 ELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDP 383

Query: 69  VSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQGSTVKSIQD 128
             PA +ALL +  +++D+         +    + TRLLV       L GK GS V  I  
Sbjct: 384 FFPAQEALLHIQTQIIDL-------IPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISR 443

Query: 129 ASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDHSIVSVFET 188
            +  S+++L  E +P  A  +D +++I GE  A  +A+  +T  LR  +     +S  ET
Sbjct: 444 LTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMFKE--LSQKET 503

Query: 189 QQNIFPQTKDL----CPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISPPDLCLDKQSHQ 248
                  T  L        + + N+ I   E  T  +    Q    +          +  
Sbjct: 504 PPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQFKEGFGSVAKA 563

Query: 249 GPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISYIRRTSGASVAI 308
           G    R+  V  T+ +    LVT+  L + +P +    ++  S   ++ I   SGASV I
Sbjct: 564 GESEHREE-VPVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTI 623

Query: 309 QETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
            E +    +  I I+GTP Q + AQ L+Q
Sbjct: 624 VEDRPEETQNIIRISGTPEQAERAQSLLQ 641

BLAST of MS020302 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.0e-15
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 0

Query: 8   GENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVSA------ 67
           G   FR+L P+  VG++IG+ G  IK++ + T A+I++ + P G+  R + + A      
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 68  ---------------KEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLL 127
                          K++ E+ VS A  AL++V + +       ++A S+    V+ RLL
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA------AEADSDT---VVCRLL 164

Query: 128 VAHAQGAILIGKQGSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAV 175
              +    +IGK G  V SI+  + C I +   E+LP  A  DD +VE++G + AV KA+
Sbjct: 165 TESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKAL 222


HSP 2 Score: 47.4 bits (111), Expect = 3.7e-04
Identity = 32/111 (28.83%), Postives = 48/111 (43.24%), Query Frame = 0

Query: 222 QGPDQYWKYISPPDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYAD 281
           + P + W   SPP       S            H      + ++VT   + +++P +   
Sbjct: 731 EAPSRLW--ASPPPAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMS 790

Query: 282 SVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLI 333
            V G  G N+  +R+ SGA V I E      +  I I+GTP Q QAAQ L+
Sbjct: 791 FVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLL 839

BLAST of MS020302 vs. ExPASy TrEMBL
Match: A0A6J1CWV1 (flowering locus K homology domain-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015305 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.5e-185
Identity = 331/340 (97.35%), Postives = 332/340 (97.65%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKIL+GPPGTLVRAVIVS
Sbjct: 53  KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILNGPPGTLVRAVIVS 112

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG
Sbjct: 113 AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 172

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH
Sbjct: 173 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 232

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SIVSVFETQ       QNIFPQTKDLCP WLPTYNDFIPGFEPHTQYDQGPDQYWKYISP
Sbjct: 233 SIVSVFETQMQMLQSKQNIFPQTKDLCPVWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 292

Query: 241 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 300
           PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY
Sbjct: 293 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 352

Query: 301 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Sbjct: 353 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 392

BLAST of MS020302 vs. ExPASy TrEMBL
Match: A0A6J1CY13 (flowering locus K homology domain-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015305 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.5e-185
Identity = 331/340 (97.35%), Postives = 332/340 (97.65%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKIL+GPPGTLVRAVIVS
Sbjct: 36  KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILNGPPGTLVRAVIVS 95

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG
Sbjct: 96  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 155

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH
Sbjct: 156 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 215

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SIVSVFETQ       QNIFPQTKDLCP WLPTYNDFIPGFEPHTQYDQGPDQYWKYISP
Sbjct: 216 SIVSVFETQMQMLQSKQNIFPQTKDLCPVWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 275

Query: 241 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 300
           PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY
Sbjct: 276 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 335

Query: 301 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Sbjct: 336 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 375

BLAST of MS020302 vs. ExPASy TrEMBL
Match: A0A6J1CXE2 (flowering locus K homology domain-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111015305 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.4e-163
Identity = 302/340 (88.82%), Postives = 303/340 (89.12%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKIL+GPPGTLVRAVIVS
Sbjct: 53  KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILNGPPGTLVRAVIVS 112

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKEDLELPVSPAMDALLRVHQK                             GAILIGKQG
Sbjct: 113 AKEDLELPVSPAMDALLRVHQK-----------------------------GAILIGKQG 172

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH
Sbjct: 173 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 232

Query: 181 SIVSVFETQ-------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 240
           SIVSVFETQ       QNIFPQTKDLCP WLPTYNDFIPGFEPHTQYDQGPDQYWKYISP
Sbjct: 233 SIVSVFETQMQMLQSKQNIFPQTKDLCPVWLPTYNDFIPGFEPHTQYDQGPDQYWKYISP 292

Query: 241 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 300
           PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY
Sbjct: 293 PDLCLDKQSHQGPVFGRDAGVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMSGVNISY 352

Query: 301 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ
Sbjct: 353 IRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 363

BLAST of MS020302 vs. ExPASy TrEMBL
Match: A0A2N9I9I8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48686 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 8.7e-113
Identity = 224/346 (64.74%), Postives = 262/346 (75.72%), Query Frame = 0

Query: 2   KWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGP--PGTLVRAVIV 61
           KWPGWPGENVFRMLVP+ KVG IIGRKGE+IKKI +ET+ARI+IL  P  PGTL RAV+V
Sbjct: 25  KWPGWPGENVFRMLVPVHKVGGIIGRKGEFIKKITQETKARIQILHAPPGPGTLERAVMV 84

Query: 62  SAKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQ 121
           SAKE+L+LPVSPAMDAL+RVH++++D+D + + ATS A G VITR+LVA  Q   LIGKQ
Sbjct: 85  SAKEELDLPVSPAMDALMRVHKRIIDVDTDSAPATSGAVGTVITRILVADTQAGSLIGKQ 144

Query: 122 GSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVD 181
           GSTVKSIQDASNC+IRVL AEHLP+F LQDDS+VE+QGE A VHKAVELI +HLRKFLVD
Sbjct: 145 GSTVKSIQDASNCTIRVLSAEHLPNFVLQDDSVVEVQGEPAGVHKAVELILNHLRKFLVD 204

Query: 182 HSIVSVFETQ---------QNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKY 241
            SIV VFE Q         QNI P  +   P   P      PGF  + QY Q P QY  Y
Sbjct: 205 RSIVGVFEMQMQMPKVQANQNI-PPHQSWGPQGFPINAGAGPGFATNPQYMQHPRQYDNY 264

Query: 242 ISPPDL-CLDKQSHQGPVFGRDA--GVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGMS 301
            SP ++  LD Q  QGP++GRDA  G H +S+QP+Q + TKV   MQIPL YAD+VIG+S
Sbjct: 265 YSPAEMPPLDNQHRQGPMYGRDASVGAHLSSVQPQQLVATKVTHHMQIPLLYADAVIGIS 324

Query: 302 GVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           G NISYIRR SGA++AIQET GVP EMTIEI G+  QVQ A+QLIQ
Sbjct: 325 GANISYIRRVSGATIAIQETMGVPEEMTIEINGSASQVQTAEQLIQ 369

BLAST of MS020302 vs. ExPASy TrEMBL
Match: A0A5N6QEK2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_002343 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 9.6e-112
Identity = 225/347 (64.84%), Postives = 264/347 (76.08%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           K WPGWPGENVFRMLVPI KVG IIGRKGE+IKKI EET+ARIKILDGPPGT  RAV+VS
Sbjct: 36  KTWPGWPGENVFRMLVPILKVGGIIGRKGEFIKKITEETKARIKILDGPPGTSERAVMVS 95

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQG 120
           AKE+ +L +SPAM+ALL+VH+++VD+D +   ATS + G VITR+LVA  Q   LIGKQG
Sbjct: 96  AKEEPDLHISPAMEALLKVHKRLVDVDADTGHATSGSVGTVITRILVADTQAGSLIGKQG 155

Query: 121 STVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDH 180
           ST+KSIQDASNC+IRVLG+EHLP+FALQDDS+VEIQGESA VHKAVELI +HLRKFLVD 
Sbjct: 156 STIKSIQDASNCTIRVLGSEHLPTFALQDDSVVEIQGESAGVHKAVELILNHLRKFLVDR 215

Query: 181 SIVSVFETQQ---NIFP-QTKDLCPDWLPTYNDFI------PGFEPHTQYDQGPDQYWKY 240
           SIV VFETQ    N+ P Q       W P    F       PGF P+ QY Q   QY  Y
Sbjct: 216 SIVGVFETQMQMPNVRPNQNMTSHQSWGPPPQGFPINAGAGPGFAPNPQYLQPSRQYDNY 275

Query: 241 ISPPDL-CLDKQSHQG-PVFGRDA--GVHFTSLQPRQSLVTKVELCMQIPLSYADSVIGM 300
             P ++  L+ Q  QG P++GRDA  G+  +S QP+Q +VTKV   MQIPL YAD+VIG 
Sbjct: 276 YQPAEMPPLNNQHMQGPPMYGRDASVGLRSSSAQPQQPVVTKVTNHMQIPLLYADAVIGT 335

Query: 301 SGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           SG NISYIRR SGAS+AIQET+G+PGEMT+EI G+  Q+Q AQQLIQ
Sbjct: 336 SGANISYIRRASGASIAIQETRGMPGEMTVEINGSSSQIQTAQQLIQ 382

BLAST of MS020302 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 339.0 bits (868), Expect = 4.4e-93
Identity = 197/352 (55.97%), Postives = 238/352 (67.61%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           K+WPGWPGE VFRMLVP QKVGSIIGRKG+ IKKI EETRARIKILDGPPGT  RAV+VS
Sbjct: 178 KRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVS 237

Query: 61  AKEDLELPVSPAMDALLRVHQKVVD-IDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQ 120
            KE+ E  + P+MD LLRVH ++VD +D   SQA   +  KV TRLLV  +Q   LIGKQ
Sbjct: 238 GKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS--KVSTRLLVPASQAGSLIGKQ 297

Query: 121 GSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVD 180
           G TVK+IQ+AS C +RVLG+E LP FALQDD +VE+ GE  +VH+A+ELI SHLRKFLVD
Sbjct: 298 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVD 357

Query: 181 HSIVSVFETQQNIFPQTKDLCPDWLPTYNDFIP--GFEPHT----------QYDQGPDQY 240
            SI+  FE Q     +  D  P   P +  + P  G  P             Y Q P ++
Sbjct: 358 RSIIPFFENQMQKPTRQMDHMP---PPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRH 417

Query: 241 WKYISPPDL---CLDKQSHQG-PVFGRD--AGVHFTSLQPRQSLVTKVELCMQIPLSYAD 300
             Y  PP++    ++KQ HQG   +GR+    VH +S  P   +  +V   MQIPLSYAD
Sbjct: 418 DSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPP--MVAQQVTQQMQIPLSYAD 477

Query: 301 SVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           +VIG SG NISY RR SGA+V IQET+GVPGEMT+E++GT  QVQ A QLIQ
Sbjct: 478 AVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQ 522

BLAST of MS020302 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 255.8 bits (652), Expect = 4.9e-68
Identity = 156/358 (43.58%), Postives = 212/358 (59.22%), Query Frame = 0

Query: 1   KKWPGWPGENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVS 60
           ++WPGWPG+ VFRM+VP+ KVG+IIGRKG++IKK+ EETRARIK+LDGP  T  R V++S
Sbjct: 65  ERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLIS 124

Query: 61  AKEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVIT-RLLVAHAQGAILIGKQ 120
            KE+ E  +SPAMDA+LRV ++V  + +N      NAG    + RLLVA  Q   LIGKQ
Sbjct: 125 GKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQ 184

Query: 121 GSTVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVD 180
           GS +KSI + S  S+R+L  E  P +A QD+ IV++QGE+  + KA+E I  HLR+FLVD
Sbjct: 185 GSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVD 244

Query: 181 HSIVSVFETQQNI-FPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISPPDLCL 240
           H++V +FE Q      QT+                 EP  +           +  PD  L
Sbjct: 245 HTVVPLFEKQYLARVSQTRQ---------------EEPLAESKSSLHTISSNLMEPDFSL 304

Query: 241 DKQSHQGPVF-GRD---------AGVHFTSLQP-------------RQSLVTKVELCMQI 300
              + + P+F  RD         +GV   S  P               + VT+V   MQI
Sbjct: 305 --LARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQI 364

Query: 301 PLSYADSVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLIQ 334
           P SYA+ +IG+ G NI+YIRR SGA++ I+E+   P ++T+EI GT  QVQ A+QLIQ
Sbjct: 365 PFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQ 404

BLAST of MS020302 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-27
Identity = 98/359 (27.30%), Postives = 156/359 (43.45%), Query Frame = 0

Query: 9   ENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIVSAKEDLELP 68
           E  FR+L P  KVGS+IG+ G  ++ +  E+ A IK+ D    +  R +++SA+E+LE  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 69  VSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQGSTVKSIQD 128
            S A D ++RVH ++V+I    S A       V+ RLLV       L+GK G  +  ++ 
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAA-------VVARLLVHSPYIGRLLGKGGHLISEMRR 394

Query: 129 ASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRKFLVDHSIVSVFET 188
           A+  SIRV   +    +  Q D IV++ G    V  A+  I   LR+ +    +      
Sbjct: 395 ATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLP----- 454

Query: 189 QQNIFPQTKDLCPDWLPTYNDFIPGFEPHTQYDQGPDQYWKYISPPDLCLDKQSHQGPVF 248
               F       P ++  Y +  P F P  QY   PD+Y   + P      ++   GP F
Sbjct: 455 ----FQGMGGPPPPFMGPYPEPPPPFGPR-QYPASPDRYHSPVGP----FHERHCHGPGF 514

Query: 249 GRDAGVHFT--------SLQP---------------------------RQSLVTKVELCM 308
            R  G  F         + QP                              ++T   + +
Sbjct: 515 DRPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSENPVMTSANVEI 574

Query: 309 QIPLSYADSVIGMSGVNISYIRRTSGASVAIQETKGVPGEMTIEITGTPLQVQAAQQLI 333
            IP +Y   V G +  N++YI++ SGA+V + + K    E  + ++GT  Q   AQ L+
Sbjct: 575 VIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLL 612

BLAST of MS020302 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-22
Identity = 59/174 (33.91%), Postives = 100/174 (57.47%), Query Frame = 0

Query: 9   ENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIV-------SA 68
           + VFR L P++K+GS+IGR G+ +K++  +TR++I+I +  PG   R + +       +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 69  KEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQGS 128
             D E  +SPA DAL R+H +VV  D+  S+ +     +V  +LLV   Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVV-ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 129 TVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRK 176
            V++I+  +   IR++   ++P  AL  D +++I GE   V KA+  I S L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

BLAST of MS020302 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-22
Identity = 59/174 (33.91%), Postives = 100/174 (57.47%), Query Frame = 0

Query: 9   ENVFRMLVPIQKVGSIIGRKGEYIKKINEETRARIKILDGPPGTLVRAVIV-------SA 68
           + VFR L P++K+GS+IGR G+ +K++  +TR++I+I +  PG   R + +       +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 69  KEDLELPVSPAMDALLRVHQKVVDIDNNYSQATSNAGGKVITRLLVAHAQGAILIGKQGS 128
             D E  +SPA DAL R+H +VV  D+  S+ +     +V  +LLV   Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVV-ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 129 TVKSIQDASNCSIRVLGAEHLPSFALQDDSIVEIQGESAAVHKAVELITSHLRK 176
            V++I+  +   IR++   ++P  AL  D +++I GE   V KA+  I S L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145988.11.8e-18497.35flowering locus K homology domain-like isoform X1 [Momordica charantia] >XP_0221... [more]
XP_022145990.11.8e-18497.35flowering locus K homology domain-like isoform X2 [Momordica charantia] >XP_0221... [more]
XP_022145993.12.9e-16388.82flowering locus K homology domain-like isoform X3 [Momordica charantia][more]
XP_030967387.15.0e-11564.62flowering locus K homology domain-like isoform X2 [Quercus lobata][more]
XP_030967386.18.6e-11564.24flowering locus K homology domain-like isoform X1 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Q9SR136.2e-9255.97Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... [more]
Q9SZH46.9e-6743.58RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ... [more]
P582237.0e-1928.87KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18... [more]
Q8W4B15.6e-1625.53RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN... [more]
F4KDN08.0e-1530.32KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1CWV18.5e-18597.35flowering locus K homology domain-like isoform X1 OS=Momordica charantia OX=3673... [more]
A0A6J1CY138.5e-18597.35flowering locus K homology domain-like isoform X2 OS=Momordica charantia OX=3673... [more]
A0A6J1CXE21.4e-16388.82flowering locus K homology domain-like isoform X3 OS=Momordica charantia OX=3673... [more]
A0A2N9I9I88.7e-11364.74Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48686 PE=4 SV=1[more]
A0A5N6QEK29.6e-11264.84Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_002343 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G04610.14.4e-9355.97RNA-binding KH domain-containing protein [more]
AT4G26000.14.9e-6843.58RNA-binding KH domain-containing protein [more]
AT1G51580.13.2e-2727.30RNA-binding KH domain-containing protein [more]
AT5G15270.21.4e-2233.91RNA-binding KH domain-containing protein [more]
AT5G15270.11.4e-2233.91RNA-binding KH domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 8..81
e-value: 1.0E-8
score: 45.0
coord: 99..174
e-value: 3.0E-12
score: 56.7
coord: 267..333
e-value: 0.0087
score: 25.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 266..333
e-value: 3.0E-13
score: 51.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 95..180
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 5..63
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 261..333
NoneNo IPR availableGENE3D3.30.310.210coord: 9..180
e-value: 6.0E-32
score: 112.6
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 1..333
NoneNo IPR availablePANTHERPTHR10288:SF259POLY(RC)-BINDING-LIKE PROTEINcoord: 1..333
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 268..332
score: 14.256646
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 9..76
score: 13.585823
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 100..169
score: 13.606787
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 104..170
e-value: 1.70094E-14
score: 65.1903
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 11..80
e-value: 1.81596E-15
score: 67.8867
NoneNo IPR availableCDDcd00105KH-Icoord: 270..333
e-value: 2.10683E-12
score: 59.4959
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 12..59
e-value: 1.2E-10
score: 41.0
coord: 273..333
e-value: 1.9E-11
score: 43.6
coord: 103..170
e-value: 1.3E-12
score: 47.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020302.1MS020302.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding