MS020281 (gene) Bitter gourd (TR) v1

Overview
NameMS020281
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOB domain-containing protein
Locationscaffold665: 709136 .. 710296 (+)
RNA-Seq ExpressionMS020281
SyntenyMS020281
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGGTGTGTTTTTGCACCTTATTTCTGCCATGAACAAGGTGCCACCCATTTTGCTGCCATTCACAAGGTCTTTGGGGCCAGCAATGTCTCTAAGCTTCTGGCCCGTCTTCCACTCACCGAGCGCTGTGAGGCTGCTGTCACAATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCCCATATCTTCGCCCTCCAACAACAGGTGCCCTTCTTCTCCCTTTATTATTATCTTACTTCCGCTTAAGGCGAAGTTGCAAAATTTGAATTTTTAGAGCCCGTTTGGTAATGTTCATGTTTCTTGTTTCTGTTTCAAAATGAATTGCATGCTCTAGTATCCATAAATCGGATAAAATAATTTCTTTTCGTTATATTTTGGAACAAATTGAAAATAAGAAAAAAAAAAGGAGATGTTTTGGTTGTCTCTAAAATTTGTTCACAATTTGCCAGAATGTTCCAAAAAATGAGTAACAAGAAACAAATTTAGTTGCAAAAAGCTTAGATTGTTTAAGAAAATTGAAAACGAGAAACAAGAAACGAAAACGTTACCGACAAACATGTTTAATTTGGATGAGTTGAAAACCCTAATTCAAGATTGAATTTTTGGTAAGTTTAACAGTAATTTAACATGATTGTTCCTCAGGTAGTGAATCTTCAAGCGCAACTCGCTTCTCTCAAAGAGCAAGCGGCGGAAAGCATTATGAACGGTGGCTCCGATAACGGGGGAGGCGGTGTCAATGAAAAGAGTTATTGCAGAAAGGTTCCTTGCCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGGGCATTTGAATAATGTAACACCCGAGTTCAATCCGAATCCGACCCACAACCCATATTGCGATGAGAACTATCGCATTATGGTTAATTCACAATCCAATGGGAATTATGAGCATAATCACTTGGCCAAGATGGAGGAAAGTGGGTCTTATGGAAGCTTTGAAGAAACCTCAGCTAATTATTCTATGTATTCTCTTGATCACATTCAATCAAATGCCCAACAATGGAGTTTCAATGAGTCTGCAGATGACTTACAATCGGTTGCTTTTGGCAATACTCGACATTGG

mRNA sequence

ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGGTGTGTTTTTGCACCTTATTTCTGCCATGAACAAGGTGCCACCCATTTTGCTGCCATTCACAAGGTCTTTGGGGCCAGCAATGTCTCTAAGCTTCTGGCCCGTCTTCCACTCACCGAGCGCTGTGAGGCTGCTGTCACAATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCCCATATCTTCGCCCTCCAACAACAGGTAGTGAATCTTCAAGCGCAACTCGCTTCTCTCAAAGAGCAAGCGGCGGAAAGCATTATGAACGGTGGCTCCGATAACGGGGGAGGCGGTGTCAATGAAAAGAGTTATTGCAGAAAGGTTCCTTGCCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGGGCATTTGAATAATGTAACACCCGAGTTCAATCCGAATCCGACCCACAACCCATATTGCGATGAGAACTATCGCATTATGGTTAATTCACAATCCAATGGGAATTATGAGCATAATCACTTGGCCAAGATGGAGGAAAGTGGGTCTTATGGAAGCTTTGAAGAAACCTCAGCTAATTATTCTATGTATTCTCTTGATCACATTCAATCAAATGCCCAACAATGGAGTTTCAATGAGTCTGCAGATGACTTACAATCGGTTGCTTTTGGCAATACTCGACATTGG

Coding sequence (CDS)

ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGGTGTGTTTTTGCACCTTATTTCTGCCATGAACAAGGTGCCACCCATTTTGCTGCCATTCACAAGGTCTTTGGGGCCAGCAATGTCTCTAAGCTTCTGGCCCGTCTTCCACTCACCGAGCGCTGTGAGGCTGCTGTCACAATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCCCATATCTTCGCCCTCCAACAACAGGTAGTGAATCTTCAAGCGCAACTCGCTTCTCTCAAAGAGCAAGCGGCGGAAAGCATTATGAACGGTGGCTCCGATAACGGGGGAGGCGGTGTCAATGAAAAGAGTTATTGCAGAAAGGTTCCTTGCCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGGGCATTTGAATAATGTAACACCCGAGTTCAATCCGAATCCGACCCACAACCCATATTGCGATGAGAACTATCGCATTATGGTTAATTCACAATCCAATGGGAATTATGAGCATAATCACTTGGCCAAGATGGAGGAAAGTGGGTCTTATGGAAGCTTTGAAGAAACCTCAGCTAATTATTCTATGTATTCTCTTGATCACATTCAATCAAATGCCCAACAATGGAGTTTCAATGAGTCTGCAGATGACTTACAATCGGTTGCTTTTGGCAATACTCGACATTGG

Protein sequence

MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNGGGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRHW
Homology
BLAST of MS020281 vs. NCBI nr
Match: XP_022146034.1 (LOB domain-containing protein 29-like [Momordica charantia])

HSP 1 Score: 500.7 bits (1288), Expect = 6.8e-138
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNG 180
           GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNG
Sbjct: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNG 180

Query: 181 NYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRH 240
           NYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRH
Sbjct: 181 NYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRH 240

Query: 241 W 242
           W
Sbjct: 241 W 241

BLAST of MS020281 vs. NCBI nr
Match: XP_023534779.1 (LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo] >KAG6606383.1 LOB domain-containing protein CRL1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036323.1 LOB domain-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.1 bits (1050), Expect = 2.7e-110
Identity = 209/245 (85.31%), Postives = 224/245 (91.43%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGA+HFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLARLPVTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAES+MNG S+N 
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESMMNGSSNN- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTH----NPYCDENYRIMVNS 180
           GGGVNEK+ CRK+P H QDLH+WFQS H +NVTP FNPNPT     NPY DENYRIM+NS
Sbjct: 121 GGGVNEKN-CRKIPSHFQDLHNWFQSDH-SNVTPGFNPNPTQDSASNPYYDENYRIMINS 180

Query: 181 QSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFG 240
           QSNGNYEH H+AKMEESGSYGSFEETS +YSMY+LDH+ SN QQWSFNES DDLQSVAFG
Sbjct: 181 QSNGNYEH-HMAKMEESGSYGSFEETS-DYSMYTLDHLHSNVQQWSFNESPDDLQSVAFG 240

Query: 241 NTRHW 242
           + R W
Sbjct: 241 HARRW 240

BLAST of MS020281 vs. NCBI nr
Match: XP_022931182.1 (LOB domain-containing protein 29-like [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 7.9e-110
Identity = 208/245 (84.90%), Postives = 223/245 (91.02%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGA+HFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLARLPVTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAES+MNG S+N 
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESMMNGSSNN- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTH----NPYCDENYRIMVNS 180
           GGGVNEK+ CRK+P H QDLH+WFQS H +NVTP FNPNPT     NPY DENYRIM+NS
Sbjct: 121 GGGVNEKN-CRKIPSHFQDLHNWFQSDH-SNVTPGFNPNPTQDSSSNPYYDENYRIMINS 180

Query: 181 QSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFG 240
           QSNGNYEH H+AKMEESGSYGSFEETS +YSMY+LDH+ SN QQW FNES DDLQSVAFG
Sbjct: 181 QSNGNYEH-HMAKMEESGSYGSFEETS-DYSMYTLDHLHSNVQQWGFNESPDDLQSVAFG 240

Query: 241 NTRHW 242
           + R W
Sbjct: 241 HARRW 240

BLAST of MS020281 vs. NCBI nr
Match: XP_022995696.1 (LOB domain-containing protein 29-like [Cucurbita maxima])

HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109
Identity = 208/245 (84.90%), Postives = 223/245 (91.02%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGA+HFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLARLPVTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAES+MN  S+N 
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESMMNSSSNN- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTH----NPYCDENYRIMVNS 180
           GGGVNEK+ CRK+P H QDLH+WFQS H +NVTP FNPNPT     NPY DENYRIM+NS
Sbjct: 121 GGGVNEKN-CRKIPSHFQDLHNWFQSDH-SNVTPGFNPNPTQDSASNPYYDENYRIMINS 180

Query: 181 QSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFG 240
           QSNGNYEH H+AKMEESGSYGSFEETS +YSMY+LDH+ SN QQWSFNES DDLQSVAFG
Sbjct: 181 QSNGNYEH-HMAKMEESGSYGSFEETS-DYSMYTLDHLHSNVQQWSFNESPDDLQSVAFG 240

Query: 241 NTRHW 242
           + R W
Sbjct: 241 HARRW 240

BLAST of MS020281 vs. NCBI nr
Match: XP_008447445.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 208/248 (83.87%), Postives = 218/248 (87.90%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAESIMN  S+  
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN-- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYC-------DENYRIM 180
            GGVNEK   RKVP HPQDLHSWFQS    NVT EFNPNPT N  C       DENYRIM
Sbjct: 121 VGGVNEKINSRKVPSHPQDLHSWFQS-EQPNVTLEFNPNPTPNNNCASNTNYYDENYRIM 180

Query: 181 VNSQSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSV 240
           VNSQSNGNYE++H+AKMEESGSYGSFEETS  YSMY+LD + SN QQWSF++SADDLQSV
Sbjct: 181 VNSQSNGNYENHHIAKMEESGSYGSFEETS-GYSMYTLDQLHSNVQQWSFSDSADDLQSV 240

Query: 241 AFGNTRHW 242
           AFGN RHW
Sbjct: 241 AFGN-RHW 243

BLAST of MS020281 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-50
Identity = 101/124 (81.45%), Postives = 108/124 (87.10%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTG GSPCGACKFLRRKCVRGCVFAPYFCHEQGA HFAAIHKVFGASNVSKLLA LPL +
Sbjct: 1   MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLAD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMN---GGS 120
           R EAAVTISYEAQARL+DPIYGCV+HIFALQQQV+ LQAQLASLK  AA+ I +   G +
Sbjct: 61  RPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGIHHQDVGAT 120

Query: 121 DNGG 122
             GG
Sbjct: 121 TKGG 124

BLAST of MS020281 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-49
Identity = 113/217 (52.07%), Postives = 138/217 (63.59%), Query Frame = 0

Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LP+++R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVVNLQA+L  LK+QAA+S++   S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPTSE 125

Query: 122 GGVNEKSYCRKVPCH--PQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSN 181
              +      K P H   Q+++      HL   T   +    H    + +Y    N  S+
Sbjct: 126 NPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGS-SGTVQHGDATESSYH---NETSS 185

Query: 182 GNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQS 217
           G         M E   Y   E+    ++   L  +QS
Sbjct: 186 G---------MGEFSIYSDLEQHLNTFNQDHLKELQS 209

BLAST of MS020281 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.2e-48
Identity = 91/113 (80.53%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIM 114
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVVNLQ QL  LK+QA +S+M
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

BLAST of MS020281 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-44
Identity = 93/160 (58.13%), Postives = 119/160 (74.38%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVV+LQAQ+  L+E+A+        D+ 
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRF---PQDDP 120

Query: 121 GGGV--NEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNP 159
           G  +   EK   +++   PQDLH+WF  G L++   +F+P
Sbjct: 121 GCNMKQQEKVLAQQM---PQDLHNWFHQGILDS---DFDP 151

BLAST of MS020281 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-40
Identity = 79/107 (73.83%), Postives = 89/107 (83.18%), Query Frame = 0

Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +P+ +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAA 110
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

BLAST of MS020281 vs. ExPASy TrEMBL
Match: A0A6J1CWZ3 (LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC111015342 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.3e-138
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNG 180
           GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNG
Sbjct: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNG 180

Query: 181 NYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRH 240
           NYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRH
Sbjct: 181 NYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRH 240

Query: 241 W 242
           W
Sbjct: 241 W 241

BLAST of MS020281 vs. ExPASy TrEMBL
Match: A0A6J1ESX5 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111437441 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.8e-110
Identity = 208/245 (84.90%), Postives = 223/245 (91.02%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGA+HFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLARLPVTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAES+MNG S+N 
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESMMNGSSNN- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTH----NPYCDENYRIMVNS 180
           GGGVNEK+ CRK+P H QDLH+WFQS H +NVTP FNPNPT     NPY DENYRIM+NS
Sbjct: 121 GGGVNEKN-CRKIPSHFQDLHNWFQSDH-SNVTPGFNPNPTQDSSSNPYYDENYRIMINS 180

Query: 181 QSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFG 240
           QSNGNYEH H+AKMEESGSYGSFEETS +YSMY+LDH+ SN QQW FNES DDLQSVAFG
Sbjct: 181 QSNGNYEH-HMAKMEESGSYGSFEETS-DYSMYTLDHLHSNVQQWGFNESPDDLQSVAFG 240

Query: 241 NTRHW 242
           + R W
Sbjct: 241 HARRW 240

BLAST of MS020281 vs. ExPASy TrEMBL
Match: A0A6J1K2M2 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111491155 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.5e-110
Identity = 208/245 (84.90%), Postives = 223/245 (91.02%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGA+HFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLARLPVTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAES+MN  S+N 
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESMMNSSSNN- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTH----NPYCDENYRIMVNS 180
           GGGVNEK+ CRK+P H QDLH+WFQS H +NVTP FNPNPT     NPY DENYRIM+NS
Sbjct: 121 GGGVNEKN-CRKIPSHFQDLHNWFQSDH-SNVTPGFNPNPTQDSASNPYYDENYRIMINS 180

Query: 181 QSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFG 240
           QSNGNYEH H+AKMEESGSYGSFEETS +YSMY+LDH+ SN QQWSFNES DDLQSVAFG
Sbjct: 181 QSNGNYEH-HMAKMEESGSYGSFEETS-DYSMYTLDHLHSNVQQWSFNESPDDLQSVAFG 240

Query: 241 NTRHW 242
           + R W
Sbjct: 241 HARRW 240

BLAST of MS020281 vs. ExPASy TrEMBL
Match: A0A1S3BHF9 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.8e-107
Identity = 208/248 (83.87%), Postives = 218/248 (87.90%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAESIMN  S+  
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN-- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYC-------DENYRIM 180
            GGVNEK   RKVP HPQDLHSWFQS    NVT EFNPNPT N  C       DENYRIM
Sbjct: 121 VGGVNEKINSRKVPSHPQDLHSWFQS-EQPNVTLEFNPNPTPNNNCASNTNYYDENYRIM 180

Query: 181 VNSQSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSV 240
           VNSQSNGNYE++H+AKMEESGSYGSFEETS  YSMY+LD + SN QQWSF++SADDLQSV
Sbjct: 181 VNSQSNGNYENHHIAKMEESGSYGSFEETS-GYSMYTLDQLHSNVQQWSFSDSADDLQSV 240

Query: 241 AFGNTRHW 242
           AFGN RHW
Sbjct: 241 AFGN-RHW 243

BLAST of MS020281 vs. ExPASy TrEMBL
Match: A0A0A0L817 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.7e-106
Identity = 206/248 (83.06%), Postives = 217/248 (87.50%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+TE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVV+LQAQLASLKEQAAESIMN  S+  
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN-- 120

Query: 121 GGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYC-------DENYRIM 180
            GGVNEK   RKVP HPQDLHSWFQS    NVT EFNPNPT N  C       DENYRIM
Sbjct: 121 VGGVNEKVNSRKVPSHPQDLHSWFQS-EQPNVTLEFNPNPTPNNNCASNANYYDENYRIM 180

Query: 181 VNSQSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSV 240
           VNSQSNGNYE++H+AKMEESGSYGSFEETS  YSMY+LD + SN QQWSF+++ DDLQSV
Sbjct: 181 VNSQSNGNYENHHIAKMEESGSYGSFEETS-GYSMYTLDQLHSNVQQWSFSDTVDDLQSV 240

Query: 241 AFGNTRHW 242
           AFGN RHW
Sbjct: 241 AFGN-RHW 243

BLAST of MS020281 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-50
Identity = 113/217 (52.07%), Postives = 138/217 (63.59%), Query Frame = 0

Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LP+++R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVVNLQA+L  LK+QAA+S++   S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPTSE 125

Query: 122 GGVNEKSYCRKVPCH--PQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSN 181
              +      K P H   Q+++      HL   T   +    H    + +Y    N  S+
Sbjct: 126 NPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGS-SGTVQHGDATESSYH---NETSS 185

Query: 182 GNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQS 217
           G         M E   Y   E+    ++   L  +QS
Sbjct: 186 G---------MGEFSIYSDLEQHLNTFNQDHLKELQS 209

BLAST of MS020281 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-49
Identity = 91/113 (80.53%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIM 114
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVVNLQ QL  LK+QA +S+M
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

BLAST of MS020281 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 179.9 bits (455), Expect = 2.5e-45
Identity = 93/160 (58.13%), Postives = 119/160 (74.38%), Query Frame = 0

Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVV+LQAQ+  L+E+A+        D+ 
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRF---PQDDP 120

Query: 121 GGGV--NEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNP 159
           G  +   EK   +++   PQDLH+WF  G L++   +F+P
Sbjct: 121 GCNMKQQEKVLAQQM---PQDLHNWFHQGILDS---DFDP 151

BLAST of MS020281 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 79/107 (73.83%), Postives = 89/107 (83.18%), Query Frame = 0

Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +P+ +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAA 110
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

BLAST of MS020281 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 162.5 bits (410), Expect = 4.1e-40
Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0

Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERC 62
           G G PCGACKFLRRKCV GC+FAPYF  EQG+ +FAA+HKVFGASNVSKLL  +P+  R 
Sbjct: 33  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRS 92

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAA 110
           +A VTI YEAQAR++DPIYGCV+HIFALQQQVVNLQA+++ L+   A
Sbjct: 93  DAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146034.16.8e-138100.00LOB domain-containing protein 29-like [Momordica charantia][more]
XP_023534779.12.7e-11085.31LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo] >KAG6606383.1... [more]
XP_022931182.17.9e-11084.90LOB domain-containing protein 29-like [Cucurbita moschata][more]
XP_022995696.11.3e-10984.90LOB domain-containing protein 29-like [Cucurbita maxima][more]
XP_008447445.11.8e-10683.87PREDICTED: LOB domain-containing protein 29 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q5UG133.3e-5081.45LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
Q9M2J76.2e-4952.07LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S... [more]
Q9SLB65.2e-4880.53LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S... [more]
Q9SJW53.5e-4458.13LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S... [more]
Q9SLB71.8e-4073.83LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1CWZ33.3e-138100.00LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1ESX53.8e-11084.90LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111437... [more]
A0A6J1K2M26.5e-11084.90LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11149115... [more]
A0A1S3BHF98.8e-10783.87LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV... [more]
A0A0A0L8175.7e-10683.06LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV... [more]
Match NameE-valueIdentityDescription
AT3G58190.14.4e-5052.07lateral organ boundaries-domain 29 [more]
AT2G42440.13.7e-4980.53Lateral organ boundaries (LOB) domain family protein [more]
AT2G31310.12.5e-4558.13LOB domain-containing protein 14 [more]
AT2G42430.11.3e-4173.83lateral organ boundaries-domain 16 [more]
AT2G45420.14.1e-4071.03LOB domain-containing protein 18 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..114
NoneNo IPR availablePANTHERPTHR31529:SF41LOB DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..240
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 1..240
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 7..105
e-value: 9.4E-36
score: 122.4
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 6..108
score: 22.19589

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020281.1MS020281.1mRNA