MS020183 (gene) Bitter gourd (TR) v1

Overview


Name	MS020183
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein cornichon homolog 1-like isoform X1
Location	scaffold735: 165440 .. 170382 (+)
RNA-Seq Expression	MS020183
Synteny	MS020183

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCTTCAACTTTTACCAGGTACCCTCCTTTCTAATCTTCGGAGATCAACCAATTCTATGTTTTTTATATGCTTTCTCTTTGGTTTCCGAGAAAGTTCGAATGCGTCTGCTGAACCCTACCTTGAAGGTTGTTGTCGTGTCTGTCTTGTTATAATCCTGTGGAACTCAGCATTTGGACCCCAATTTGATTGTCCATCTAGATGTGACCTAGATTTTGATTGATGCCATACTGTTTCTGTTGGAGGAAGTTTTTATTGGTTTCTTTGCTTGCTGATGCTGGCTAATAATGGAAGTGGAACCTTCTTACACTCTGATTTCACCGTTTTCTCTCTGGGTTTCTTAAACAAGCTGTAGAACCATCAAATTTATGTCGACGGATTTGGTATTTTGTTAAATTGTGCACTGATTAGCTGTAAGAAATGCATTCGCAAAATGACAACGCCTAGGCATCTGTTGTATATTGAATAGCCAGCCATGTCCAGTGAACGGAATGATCATTTCATTTTCATCTGAGTCAACGATGCCCTTTTACTTGTTAAGTAGCCTTTAGAGAATGGCTACCCGTATAAGGGTAGCGCAGTTGCCAAGGACTTGGGGTCTCTTGGTCGTATTGGCTTAAAGTCTCAAGTTCGAACATTCTGACGAGCTTAATACCAAATATCTTTGATGTCTCTTGGGCCGTGCCCCTGGATATAGGAAGTAAAGCTCCAACTTCAAATTAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAAAAAAAAGGGAAAAGGTAGCCCTCAGAGAATGTGTGGACAAATGATGTGAAAATGGATTTCAACTTATGTCCCCGCTGGTTATTTGTGGGGTAATGAACTATGATAATGTCTTGTCTCTATTGCTGTTTACATTTGTATGGACATGGTGAATATTTAGAGTTCCTATTTAGGTCAATATCACTGGCCATTTGAAAGAGTAGTATTGATTGCCTAGATACATTTGTGCTTTTCAAGTTTGAAGCATCTAATGGATATGGTTGATCTTTCTGTAGCTTTTGGTATTGACGGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAGCTTGTCATTCCAGAGTTTATAGTGCAAGGAGTATTTTGCTCGCTTTTCCTCTTGACTGGCCATTGGTTCATGTTTCTTATTACCGTTCCTGTCAGCTGCTATCACATAAGATTGTAAGTATTTCTTGAAATTGATACAAAGCATGATGTATATTTTTCTTTTACTGCGTGTTATGGATGAGGCATATTGGTGGAGTTTCTTCGTTGACTTTCTCCTTTTGCTGTTGGAAATGTCATGGATGAGGCTTCTGGCGTTTGTAAAATGAATCAAGCCTGCACTCATATTGTGTATATGTATATATTTTTGTTTGGATATATTCATATTGATCCGGGCCCTTTTTATTTTACAATAAAAAATATTTGGATTGTAGTTTTTTCTCTTAAAAAACTGCATTCATTCTTAACTTTTCAGTCTGTCAATGAAAAGTTACGGAAATGGTTATTATATACTTCTTACAGTTTTATTGTTACTATTATCCTTTTACAGTTTTATTATGTTGTTCTGCTATCAAGCACAATATCTTTTAAGATGCGCATATGTAGTGAAAGCTGCTTGGAAGGGTTAGGAACTTTGCATGTTTTCACTCTGAAGTTGAGATGGTCATTTGTAAAACGAGTGAACTGTAGATTCCTGTAATTGTCAAGTTGCTGGGTGTCATTTAAGTTGTTGGAACATTTTTTATTTACCCCTCAAGATTGAGTCTGTTTCTGCATGATTAAGTGCTTTAGGAGTTTGCTGGTGCTTTTTTGAAAAGTATGATAACTAATGGGTACTTATTATTTTAGATATTCAATGGTTAGTGTTTCTGACACCATAATGAGCTCATAAGCTTAGATTTACAGTTTATAATTTCTATTTTAAGTTTTTAATGGGTCTGTTCCCTTCTGGCATGCTTTCAGATTGATTTGATTTGTTCCCCTTTTTTGGGTCGATTCCAGGTTTTCTTTTCAATGAAAAAATGAGGAAAAGAAGTTGGTTAGATTCCAAGAAAATGTAAATTATTTTTTCAGAATACTCTTTATAGTAGATGTTCTCTCTGTATTTACTATTTATCTACTTTGTTTTGAAGTTATTCATTTAGTTTTAATCTTGTATTTATAAAGTTGAGTACATTATCATCCAGTTCTCTCAAAAAATGAAAGGTATCTTATCATCCGGTATTTGATTTTTTCAGTTTGTCAGATAAGCATAGGAATCTGAATATCTTTGCCCTAAATAATAATATTAGGACATTGGGAATCTGTTAAGAAAAATTTCAGCTTGTTGAAATGGTATAGAATTAAAGATATGAAATATATAAAAGGCAAACCAAAATCCAAATCAAAATTATAGAAACAATCTAATCAGCATTAACTAAATAAGAGGAAGAATTATGAAGAGCCTGGTAGGACTGTAGGAGCACTACCATCTAAAAGTATGAGATTCCACAACTCTCAAAATTCCTTTTTATTGCTTGGAAGACTCTTCTATTTCTTTTCAACAAAATTTCCGGGAGGGTGGCCTTGATTGCATCAAGCCACTGGGTTTTCTTGCCTTGTCCTTTTTGAAGGATGACCACAGAACAATATTATGGTCTTTAATCCTCCTAGGAAAAGGGAATTGCAGCCAAACATTGCTAAGTTTAAACCAACGAGCAAAAGGCATAGGATACTATTTGGAGATGTAACGATAACTTCACCATTTGCTTGATCAACCAGGTGAGCGGACTCTACTGTGTGCCTCTGAACCTCATCATGTGTACTGATGCCCCAAAGAAATAGAGTCAAATCAAAGATGGCAACCTTTTTTGAGCATTGGAACTTTCAGATCATCTTGCACGACTTGGGTTGAATTGCCACCTCTTTGGCAGTAACTCAGTAAGATTGTGAAATAAAGATTTGCGAGAGAAATGTCCTGAAATATTGAACAACCAGAATTAGAATTATGGGATTTATTAAGCTAAAAGTTACCCAACTTGGATAAAGAGACAACCATTCGGTCTATAAATCTATCATGATAATTCCTTCTGAAATTATCTCTGCCTTCAAACCAGTAATCCTAAATGGTTTTGCCTTTCAGCCAAGGAAAGAAGTCCTTTAATCAAAAGACATAGTGGCAATAGAATCCTGAAGGCCCCTTGGGATATATACCAGAAATGACGTTTGTGCCGCCTTTTATTAGAGATCTTCAAATCCACTTAGCTAATAAGTGTCCATTCCCCATTCTAATATTTCCAATGTATACTCCACCTATATCCAGAGGACGATGCCCAACATATCAATTTACACGATGGCTGCCGCACGCTGTATCCATCCCTCGTCATGGGCATATTAATCATCTTCATCTTTTCAGATGATAAAACAGTCCTTTTCTAATAACATGCTGTCAGAATGAGTTGATGCTTGCGGATGAAACATGTCTTTTATTTATTTATATCCTTCAGTATCCGAGCTAGCTTGTGCTCACCTCAAATAATCTCATGGGACAATCACTTGATATTACATTTGATCGTCAAGGTAACATAGAGGATATTATATCCTAGGTAGGTGGTTACCATAGTTTGAACTTATTCCTTCCAAGTCCTTTACTATTTACATTGGTCCTTATTAGCCACTAAGTCAAAGCATGATAGTTCATGGAACCGTTCTTGTTGACTGACGCATTGGAACTAAAAATTTGTGTAACCAAATAATCTTTCAAATATTTTTATTTTTTTACATATATAACTTTCTCATTGATATATATTGGAGATAAAAACTTTTTTTCTAGTCTTAAAAGATAAAAGAGATAAAAAAAGAAGCAGATTTATAAAAAGTAGAAATTCAACCAAGTATCACTCTTTAAGGTTGGGAGCATCACAATGAAAATTGTGTTGTACCTAACAGACGTAAGAAAAATTATAATTATAAATGGACTATTGATAATTATTGTAATCTCATTCTGCTTTAGGGAGATTTGCAAGCTTTTAATAATACCACTGTAGATGTTGGATACTTTATCGTAATTAATAATACTACCAAAGGTACTCTATCATGTAAAGACAGTAACCCTTATCCTTTCTTTTGTAAAAAGTTAAAAACTTTTAGGCAATAACTAAGTGCTCATTGAATCTTTGGAAATAAAAGCATCAAAGAATTATTCCTTTCTTCATTCTCTATTCCGTCTTACTCTATGGAGCTATTCCAGTATTATACTGAAATTTTTAGAGGCGCCCTCCATCAATTGAAGCATGCCAACTTATTGTTTGAACCTCAGATTCCACATATATGTCTTTAATAGATTTTCAGTGATGGATAGCCATCTACTGCTGGTCTATTTTAGGAATAAAACCAATATTTTCTAATGAGAAGATGGTAAACGGGAAGGAAAAAAAAAGAAAAGAAAAGAAAAGAAGAAAAGAAAAGAAAAAGAAATGCAATTGTATTCCACTAGTTGGACTGTGAATTTCCTTCAAGTATTTCTCCTTATTTGTATGCTTATGACATGTAATATCCTATTACAATGTCCCAGGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGTTCTCAAACGTGAGAAGTATTTTCGTTTGGGCAAGCTTATCTTCTATTTGCTTATGTTCCTCATAGTAATCTTCAGGTTAGATTGCACATTTTCACTCTCTCATTATGCTTTTTCTCTAAACTATTTAGAAGGTAGAATCTTCCTGATTGAAGTTTTCCTTGCTGTTTCTGTATAGAATTATAGTGGCCGCAGGAATGAATTCTGTTTTTGACTCTGCGCCCGAGGATATAGACATTCGCTCCACTGTTCTCGAATTC

mRNA sequence

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCTTCAACTTTTACCAGCTTTTGGTATTGACGGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAGCTTGTCATTCCAGAGTTTATAGTGCAAGGAGTATTTTGCTCGCTTTTCCTCTTGACTGGCCATTGGTTCATGTTTCTTATTACCGTTCCTGTCAGCTGCTATCACATAAGATTGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGTTCTCAAACGTGAGAAGTATTTTCGTTTGGGCAAGCTTATCTTCTATTTGCTTATGTTCCTCATAGTAATCTTCAGAATTATAGTGGCCGCAGGAATGAATTCTGTTTTTGACTCTGCGCCCGAGGATATAGACATTCGCTCCACTGTTCTCGAATTC

Coding sequence (CDS)

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCTTCAACTTTTACCAGCTTTTGGTATTGACGGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAGCTTGTCATTCCAGAGTTTATAGTGCAAGGAGTATTTTGCTCGCTTTTCCTCTTGACTGGCCATTGGTTCATGTTTCTTATTACCGTTCCTGTCAGCTGCTATCACATAAGATTGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGTTCTCAAACGTGAGAAGTATTTTCGTTTGGGCAAGCTTATCTTCTATTTGCTTATGTTCCTCATAGTAATCTTCAGAATTATAGTGGCCGCAGGAATGAATTCTGTTTTTGACTCTGCGCCCGAGGATATAGACATTCGCTCCACTGTTCTCGAATTC

Protein sequence

MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF

Homology

[Close]

BLAST of MS020183 vs. NCBI nr
Match: XP_022151664.1 (protein cornichon homolog 1-like isoform X1 [Momordica charantia] >XP_022151665.1 protein cornichon homolog 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM
Sbjct: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF
Sbjct: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. NCBI nr
Match: XP_022928680.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-70
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLV NFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLK+EHLIDVTEVFR LKREKYFRL KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. NCBI nr
Match: XP_022967916.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLV NFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLK+EHLIDVTEVFR LKREKYFRL KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. NCBI nr
Match: KAG7033543.1 (Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLV NFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF++QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLK+EHLIDVTEVFR LKREKYFRL KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. NCBI nr
Match: XP_023543605.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 3.9e-70
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAW+LIFWFISFCINVALLV NFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWDLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLK+EHLIDVTEVFR LKREKYFRL KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-33
Identity = 73/132 (55.30%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEFI+QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           C LFLLT HW  FL+ VPV+ YH  L+ +R +LIDVTEVFR +  EK  R  KL FY+ +
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLIVIFRIIVAA 133
           F++V+FR+ ++A
Sbjct: 121 FIMVVFRLTLSA 132

[Close]

BLAST of MS020183 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 8   WFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLT 67
           W ISF   +AL+    YQL+ L DLE DY+N YDS+SRIN +V+PEFIVQGV C  +LLT
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFR 127
           GHWFM L+ +P   Y+  L+ KR+HL+DVTE+F +L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIVAA 133
           +I +A
Sbjct: 127 MIYSA 131

[Close]

BLAST of MS020183 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 62/122 (50.82%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   WFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLT 67
           W ISF I + LL    YQL+ L DLE DY+N YDS+SRIN +V+PE I+QG  C  +L+T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFR 127
           GHWFM L+ VP   Y+  L+ +++HLIDVTE+F +L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

[Close]

BLAST of MS020183 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 19  LVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEFIVQGV C  +LLTGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFRIIVAA 133
              Y+  L+ KR+HL+DVTE+F +L  EK  RL KL + +L   + IF +I +A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of MS020183 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 4   NLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSL 63
           +L+ W ISF     L++   YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLI 123
           ++LTGHWFM ++++P   Y+IRL++KREHL DVTE++   K E+  R+ K+    L   I
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRIIVAA 133
             + +I +A
Sbjct: 123 TTYWLIHSA 131

[Close]

BLAST of MS020183 vs. ExPASy TrEMBL
Match: A0A6J1DBU0 (protein cornichon homolog 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019577 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.0e-76
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM
Sbjct: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF
Sbjct: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. ExPASy TrEMBL
Match: A0A6J1ESA6 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.0e-71
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLV NFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLK+EHLIDVTEVFR LKREKYFRL KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. ExPASy TrEMBL
Match: A0A6J1HTE7 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.5e-71
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAWNLIFWFISFCINVALLV NFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLK+EHLIDVTEVFR LKREKYFRL KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. ExPASy TrEMBL
Match: A0A6J1HRR4 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 136/154 (88.31%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAW+LIFWF+SFCIN+ALLV NFYQLLVLTDLEADYLNIYDSSSRINKLV+PEF+VQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLKREHLIDVTEVF+ LKREKYFR  KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAPEDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. ExPASy TrEMBL
Match: A0A6J1EB17 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 136/154 (88.31%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAW+LIFWF+SFCIN+ALLV NFYQLLVLTDLEADYLNIYDSSSRINKLV+PEF+VQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           CSLFL TGHWFMFLITVPVSCYHI LFLKREHLIDVTEVF+ LKREKYFR  KLIFYLL+
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRIIVAAGMNSVFDSAPEDIDIRSTVLEF 155
           FL+VIFRII+ AGM SVFDSAPEDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of MS020183 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 73/132 (55.30%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEFI+QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLM 120
           C LFLLT HW  FL+ VPV+ YH  L+ +R +LIDVTEVFR +  EK  R  KL FY+ +
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLIVIFRIIVAA 133
           F++V+FR+ ++A
Sbjct: 121 FIMVVFRLTLSA 132

[Close]

BLAST of MS020183 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.1e-28
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 8   WFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLT 67
           W ISF   +AL+    YQL+ L DLE DY+N YDS+SRIN +V+PEFIVQGV C  +LLT
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFR 127
           GHWFM L+ +P   Y+  L+ KR+HL+DVTE+F +L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIVAA 133
           +I +A
Sbjct: 127 MIYSA 131

[Close]

BLAST of MS020183 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 62/122 (50.82%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   WFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLT 67
           W ISF I + LL    YQL+ L DLE DY+N YDS+SRIN +V+PE I+QG  C  +L+T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFR 127
           GHWFM L+ VP   Y+  L+ +++HLIDVTE+F +L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

[Close]

BLAST of MS020183 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 111.3 bits (277), Expect = 6.9e-25
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 19  LVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSLFLLTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEFIVQGV C  +LLTGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLIVIFRIIVAA 133
              Y+  L+ KR+HL+DVTE+F +L  EK  RL KL + +L   + IF +I +A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of MS020183 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 4   NLIFWFISFCINVALLVFNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFIVQGVFCSL 63
           +L+ W ISF     L++   YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLLTGHWFMFLITVPVSCYHIRLFLKREHLIDVTEVFRVLKREKYFRLGKLIFYLLMFLI 123
           ++LTGHWFM ++++P   Y+IRL++KREHL DVTE++   K E+  R+ K+    L   I
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRIIVAA 133
             + +I +A
Sbjct: 123 TTYWLIHSA 131

The following BLAST results are available for this feature:

BLAST of MS020183 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151664.1	2.1e-76	100.00	protein cornichon homolog 1-like isoform X1 [Momordica charantia] >XP_022151665....	[more]
XP_022928680.1	1.0e-70	91.56	protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 P...	[more]
XP_022967916.1	1.3e-70	91.56	protein cornichon homolog 1-like isoform X1 [Cucurbita maxima]	[more]
KAG7033543.1	1.7e-70	90.91	Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023543605.1	3.9e-70	90.91	protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS020183 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7D7	1.8e-33	55.30	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]
Q84W04	7.2e-27	52.80	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	2.6e-24	50.82	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	9.8e-24	51.75	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	2.7e-21	44.96	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]

BLAST of MS020183 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBU0	1.0e-76	100.00	protein cornichon homolog 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1ESA6	5.0e-71	91.56	protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HTE7	6.5e-71	91.56	protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HRR4	1.6e-69	88.31	protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EB17	1.6e-69	88.31	protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MS020183 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12180.1	1.3e-34	55.30	Cornichon family protein	[more]
AT1G12390.1	5.1e-28	52.80	Cornichon family protein	[more]
AT1G62880.1	1.8e-25	50.82	Cornichon family protein	[more]
AT1G12340.1	6.9e-25	51.75	Cornichon family protein	[more]
AT4G12090.1	1.9e-22	44.96	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 5..126 e-value: 3.0E-52 score: 189.6
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..126 e-value: 9.3E-39 score: 132.5
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..131
None	No IPR available	PANTHER	PTHR12290:SF11	PROTEIN CORNICHON	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020183.1	MS020183.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport