MS020181 (gene) Bitter gourd (TR) v1

Overview
NameMS020181
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Locationscaffold735: 125303 .. 125938 (-)
RNA-Seq ExpressionMS020181
SyntenyMS020181
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTCGATACTTCCTCCACCGTCCGCTTCTGTCTCCACGGCGGCGCCGCCGCGGTTTCCTCCGGCGATCAGCCGCATCAGGTCCTGGAAGTCCGATTGAAGCGTCTGAGCCGTCTGATATCGCGATCTCCAGCGGCGGGGGTTCCGCACCAGATCCTCCAGGAAACTCCGCCGTCTCCGGTGGCGGACGCCGCGTTCGTTCTCCCTCTGCGCGATCCGCTGTTTCTCGAGGCCTACGTCCGGCAGTTGCTGTGCTCGCTGAATCTCCCCGCCGGCGCCTGCGGAGCCATCGGCCGGAGGATCGCGTCGTTCGTCGTCGAATTGGCGGGCGGAAACAGTGCGGCGAGCCTCCACATTGTGGCGTTGGTGAATTACATTGAGGAGTTTTGGCTGGATCCGATCCCGGCGCCGGTGCCACCGAGCGGAGGGGCGGCAGAATCGGCGATCTCGAGGCTGAAGAAGGAGAAGGTTGAAGAAGGAGTAGAATTGGGAGATTGCAGCGTTTGTTTGAATGAGATGAATGGCGGGAGGCAGGTGATTAGGATTCCGTGCGGTCATGTGTATCATGAATCCTGCATCCTCACATGGCTGAGGAAGAGCAATTCTTGCCCATTGTGTAGAACAAAGTTGGAA

mRNA sequence

ATGCCTTTCGATACTTCCTCCACCGTCCGCTTCTGTCTCCACGGCGGCGCCGCCGCGGTTTCCTCCGGCGATCAGCCGCATCAGGTCCTGGAAGTCCGATTGAAGCGTCTGAGCCGTCTGATATCGCGATCTCCAGCGGCGGGGGTTCCGCACCAGATCCTCCAGGAAACTCCGCCGTCTCCGGTGGCGGACGCCGCGTTCGTTCTCCCTCTGCGCGATCCGCTGTTTCTCGAGGCCTACGTCCGGCAGTTGCTGTGCTCGCTGAATCTCCCCGCCGGCGCCTGCGGAGCCATCGGCCGGAGGATCGCGTCGTTCGTCGTCGAATTGGCGGGCGGAAACAGTGCGGCGAGCCTCCACATTGTGGCGTTGGTGAATTACATTGAGGAGTTTTGGCTGGATCCGATCCCGGCGCCGGTGCCACCGAGCGGAGGGGCGGCAGAATCGGCGATCTCGAGGCTGAAGAAGGAGAAGGTTGAAGAAGGAGTAGAATTGGGAGATTGCAGCGTTTGTTTGAATGAGATGAATGGCGGGAGGCAGGTGATTAGGATTCCGTGCGGTCATGTGTATCATGAATCCTGCATCCTCACATGGCTGAGGAAGAGCAATTCTTGCCCATTGTGTAGAACAAAGTTGGAA

Coding sequence (CDS)

ATGCCTTTCGATACTTCCTCCACCGTCCGCTTCTGTCTCCACGGCGGCGCCGCCGCGGTTTCCTCCGGCGATCAGCCGCATCAGGTCCTGGAAGTCCGATTGAAGCGTCTGAGCCGTCTGATATCGCGATCTCCAGCGGCGGGGGTTCCGCACCAGATCCTCCAGGAAACTCCGCCGTCTCCGGTGGCGGACGCCGCGTTCGTTCTCCCTCTGCGCGATCCGCTGTTTCTCGAGGCCTACGTCCGGCAGTTGCTGTGCTCGCTGAATCTCCCCGCCGGCGCCTGCGGAGCCATCGGCCGGAGGATCGCGTCGTTCGTCGTCGAATTGGCGGGCGGAAACAGTGCGGCGAGCCTCCACATTGTGGCGTTGGTGAATTACATTGAGGAGTTTTGGCTGGATCCGATCCCGGCGCCGGTGCCACCGAGCGGAGGGGCGGCAGAATCGGCGATCTCGAGGCTGAAGAAGGAGAAGGTTGAAGAAGGAGTAGAATTGGGAGATTGCAGCGTTTGTTTGAATGAGATGAATGGCGGGAGGCAGGTGATTAGGATTCCGTGCGGTCATGTGTATCATGAATCCTGCATCCTCACATGGCTGAGGAAGAGCAATTCTTGCCCATTGTGTAGAACAAAGTTGGAA

Protein sequence

MPFDTSSTVRFCLHGGAAAVSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLRDPLFLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNGGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKLE
Homology
BLAST of MS020181 vs. NCBI nr
Match: XP_022151640.1 (E3 ubiquitin-protein ligase RNF181-like [Momordica charantia])

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-71
Identity = 149/216 (68.98%), Postives = 171/216 (79.17%), Query Frame = 0

Query: 1   MPFDTSSTVRFCLHGGAAAVSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPS 60
           M   TS +VR+CLHG  + VSSGDQPHQVL+VRL+  SR+ISRSPAA     ILQET  +
Sbjct: 1   MSSSTSFSVRYCLHGHRSVVSSGDQPHQVLQVRLRSQSRMISRSPAA-----ILQETSWT 60

Query: 61  PVADAAFVLP---LRDPLFLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNS-AA 120
           P+A+A F LP   L   LFLEAY+RQLLCSL+LP GAC  I R+IASFVVELAGGNS   
Sbjct: 61  PMANAVFPLPLSALNGLLFLEAYIRQLLCSLDLPEGACEVIARKIASFVVELAGGNSDQV 120

Query: 121 SLHIVALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNG 180
           +LH+VALV+YIEE  +    AP     GAA+SAISRLKKEKVEE VELGDCSVCLNEMNG
Sbjct: 121 NLHVVALVDYIEEMAIVAEEAP----AGAAKSAISRLKKEKVEEEVELGDCSVCLNEMNG 180

Query: 181 GRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKLE 213
           G +VI++PCGHVYHESCIL+WL K+NSCPLCRTKLE
Sbjct: 181 GSEVIKMPCGHVYHESCILSWLNKNNSCPLCRTKLE 207

BLAST of MS020181 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 9.2e-46
Identity = 106/211 (50.24%), Postives = 140/211 (66.35%), Query Frame = 0

Query: 24  DQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLR---DPLFLEAY 83
           D P Q+L++R+   SRL++ SP +G P  I+ ET P+ +ADA F LPLR   DPLF +AY
Sbjct: 17  DGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQFPLPLRELEDPLFCQAY 76

Query: 84  VRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPIPAPVP 143
           +++ L S NL A    AI RRIASFVV++A GN   + +IVA ++YI+ FW+D       
Sbjct: 77  IKEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEIDYIQMFWMDDSATAAE 136

Query: 144 P--------------SG--GAAESAISRLKKEKVE--EGVELGDCSVCLNEM-NGGRQVI 203
                          SG  GA E+AI RLKKEK +   G +LG+CSVC +EM +GG +V 
Sbjct: 137 EEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLGNCSVCYDEMKDGGEEVS 196

Query: 204 RIPCGHVYHESCILTWLRKSNSCPLCRTKLE 213
           RIPCGHVYH+SC+LTWL+++NSCPLCR KLE
Sbjct: 197 RIPCGHVYHKSCVLTWLQRNNSCPLCRNKLE 227

BLAST of MS020181 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-44
Identity = 106/223 (47.53%), Postives = 140/223 (62.78%), Query Frame = 0

Query: 24  DQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLR---DPLFLEAY 83
           D P Q+L++R++  +RL++ SP +G P  I+ ET P+ +ADA F LPLR   DPLF +AY
Sbjct: 17  DDPDQLLQIRIRHSTRLLTGSPFSGYPFNIVHETLPTTMADAQFPLPLRELEDPLFCQAY 76

Query: 84  VRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPIPAPVP 143
           + + L S NL A    AI RRIASFVV++A GN   + +IVA ++YI+ FWLD       
Sbjct: 77  IEEFLSSYNLGATIKNAIARRIASFVVQMACGNYEMTFYIVAEIDYIQMFWLDQSAIAAE 136

Query: 144 P--------------------------SG--GAAESAISRLKKEKVE--EGVELGDCSVC 203
                                      SG  GA E+AI RLKKEK +   G +LG+CSVC
Sbjct: 137 EEEEEEEDEEEEEDEEEEEEEVIFDNFSGRRGAPETAIERLKKEKFDGFGGEDLGNCSVC 196

Query: 204 LNEM-NGGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKLE 213
            +EM +GG +V RIPCGHVYH+SC+LTWL+++NSCPLCR KLE
Sbjct: 197 YDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRKKLE 239

BLAST of MS020181 vs. NCBI nr
Match: KAG6596836.1 (hypothetical protein SDJN03_10016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-40
Identity = 100/222 (45.05%), Postives = 129/222 (58.11%), Query Frame = 0

Query: 24  DQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLR---DPLFLEAY 83
           D P Q+L++R+    RL   SP  G P  I+ ET  +   DA F LPLR   DPLF  AY
Sbjct: 17  DGPDQLLQIRIGHSRRLFIGSPLPGYPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAY 76

Query: 84  VRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPIPAPVP 143
           + + L S NL A    AI +RIASFVV++A GN   + +IVA ++YI+ FWLD       
Sbjct: 77  IEEFLSSYNLDATINNAIAQRIASFVVQMACGNYEMTFYIVAEIDYIQMFWLDQSAIAAE 136

Query: 144 PS---------------------------GGAAESAISRLKKEKVE--EGVELGDCSVCL 203
                                         GA E+AI RLKKEK +   G +LG+CSVC 
Sbjct: 137 EEEEEEEEEDEEEEEEEEEEVIFDNFSERRGAPETAIERLKKEKFDGFGGEDLGNCSVCY 196

Query: 204 NEM-NGGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKLE 213
           +EM  GG ++IRIPCGHVYH+SC+LTWL+++NSCPLCR K+E
Sbjct: 197 DEMKEGGEELIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIE 238

BLAST of MS020181 vs. NCBI nr
Match: XP_023006826.1 (E3 ubiquitin-protein ligase RNF126-like [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 6.4e-39
Identity = 98/205 (47.80%), Postives = 121/205 (59.02%), Query Frame = 0

Query: 20  VSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLRD----PL 79
           V+SG QP Q+LE+RL   + LISRS       QILQ+TP +P+ DA F   LRD    P 
Sbjct: 23  VASGQQPIQLLELRLGHSTHLISRS-----SRQILQQTPSTPIGDALFPFVLRDLQHPPF 82

Query: 80  FLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPI 139
               YV Q L S ++P  AC  I   I+SF ++LA GN   + HIV  V+  E  W+D  
Sbjct: 83  LSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNMDLNFHIVVEVDVNEMIWVDLD 142

Query: 140 PAPV-----PPSGGAAESAISRLKKEK---VEEGVELGDCSVCLNEMNGGRQVIRIPCGH 199
           P  V         GA  SAI RL+++K   + E  E GDCSVC   + G  +V RIPCGH
Sbjct: 143 PFLVEEYSPAEMNGAPASAIERLQRQKFDGLREEEEEGDCSVCCEALKGEEEVSRIPCGH 202

Query: 200 VYHESCILTWLRKSNSCPLCRTKLE 213
           VYH+ CIL WL+ SNSCPLCRTKLE
Sbjct: 203 VYHKFCILKWLQMSNSCPLCRTKLE 222

BLAST of MS020181 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 133 DPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNGGRQVIRIPCGHVYHES 192
           DP     PP+  +A  A+  +K  K     E+  C+VC++E   G  V ++PC HV+H+ 
Sbjct: 182 DPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQD 241

Query: 193 CILTWLRKSNSCPLCRTKL 212
           C+L WL   NSCP+CR +L
Sbjct: 242 CLLPWLELHNSCPVCRFEL 260

BLAST of MS020181 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-11
Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 0

Query: 133 DPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNGGRQVIRIPCGHVYHES 192
           DP     PP+  +A  A+  +   K     E   C+VC+++   G +  ++PC H+YH+ 
Sbjct: 190 DPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKD 249

Query: 193 CILTWLRKSNSCPLCRTKL 212
           C+L WL   NSCP+CR +L
Sbjct: 250 CLLPWLELHNSCPVCRHEL 268

BLAST of MS020181 vs. ExPASy Swiss-Prot
Match: Q9VE61 (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN=CG7694 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-11
Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0

Query: 118 LHIVALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKVEEGVELGD--CSVCLNEMN 177
           L ++A++N I+      +   VP    A++ AI  L   ++ +  E GD  CSVC     
Sbjct: 28  LQVLAIMNGID------MEIEVPE---ASKRAILELPVHEIVKSDEGGDLECSVCKEPAE 87

Query: 178 GGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKLE 213
            G++   +PC H +HE CIL WL+K+NSCPLCR +LE
Sbjct: 88  EGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELE 115

BLAST of MS020181 vs. ExPASy Swiss-Prot
Match: Q5M974 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 35/83 (42.17%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 131 WLDPIPAPVPPSGGAAESAISRLKKEKV--EEGVELGDCSVCLNEMNGGRQVIRIPCGHV 190
           W   +P P      AA+  +  L K  V  E+      C VCL E   G  V ++PC H+
Sbjct: 47  WDQRLPPP------AAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHL 106

Query: 191 YHESCILTWLRKSNSCPLCRTKL 212
           +H SCIL WL K+NSCPLCR +L
Sbjct: 107 FHSSCILPWLGKTNSCPLCRHEL 123

BLAST of MS020181 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 133 DPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNGGRQVIRIPCGHVYHES 192
           DP     PP   A + A+  L   K+EE V    CSVCL+++  G Q  ++PC H +H S
Sbjct: 171 DPSRNGTPP---AKKEAVEALPTVKIEEVV---SCSVCLDDLEVGSQAKQMPCEHKFHSS 230

Query: 193 CILTWLRKSNSCPLCRTKL 212
           CIL WL   +SCP+CR +L
Sbjct: 231 CILPWLELHSSCPVCRFEL 243

BLAST of MS020181 vs. ExPASy TrEMBL
Match: A0A6J1DBR5 (E3 ubiquitin-protein ligase RNF181-like OS=Momordica charantia OX=3673 GN=LOC111019547 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.2e-72
Identity = 149/216 (68.98%), Postives = 171/216 (79.17%), Query Frame = 0

Query: 1   MPFDTSSTVRFCLHGGAAAVSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPS 60
           M   TS +VR+CLHG  + VSSGDQPHQVL+VRL+  SR+ISRSPAA     ILQET  +
Sbjct: 1   MSSSTSFSVRYCLHGHRSVVSSGDQPHQVLQVRLRSQSRMISRSPAA-----ILQETSWT 60

Query: 61  PVADAAFVLP---LRDPLFLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNS-AA 120
           P+A+A F LP   L   LFLEAY+RQLLCSL+LP GAC  I R+IASFVVELAGGNS   
Sbjct: 61  PMANAVFPLPLSALNGLLFLEAYIRQLLCSLDLPEGACEVIARKIASFVVELAGGNSDQV 120

Query: 121 SLHIVALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNG 180
           +LH+VALV+YIEE  +    AP     GAA+SAISRLKKEKVEE VELGDCSVCLNEMNG
Sbjct: 121 NLHVVALVDYIEEMAIVAEEAP----AGAAKSAISRLKKEKVEEEVELGDCSVCLNEMNG 180

Query: 181 GRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKLE 213
           G +VI++PCGHVYHESCIL+WL K+NSCPLCRTKLE
Sbjct: 181 GSEVIKMPCGHVYHESCILSWLNKNNSCPLCRTKLE 207

BLAST of MS020181 vs. ExPASy TrEMBL
Match: A0A6J1KYV1 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499496 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.1e-39
Identity = 98/205 (47.80%), Postives = 121/205 (59.02%), Query Frame = 0

Query: 20  VSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLRD----PL 79
           V+SG QP Q+LE+RL   + LISRS       QILQ+TP +P+ DA F   LRD    P 
Sbjct: 23  VASGQQPIQLLELRLGHSTHLISRS-----SRQILQQTPSTPIGDALFPFVLRDLQHPPF 82

Query: 80  FLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPI 139
               YV Q L S ++P  AC  I   I+SF ++LA GN   + HIV  V+  E  W+D  
Sbjct: 83  LSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNMDLNFHIVVEVDVNEMIWVDLD 142

Query: 140 PAPV-----PPSGGAAESAISRLKKEK---VEEGVELGDCSVCLNEMNGGRQVIRIPCGH 199
           P  V         GA  SAI RL+++K   + E  E GDCSVC   + G  +V RIPCGH
Sbjct: 143 PFLVEEYSPAEMNGAPASAIERLQRQKFDGLREEEEEGDCSVCCEALKGEEEVSRIPCGH 202

Query: 200 VYHESCILTWLRKSNSCPLCRTKLE 213
           VYH+ CIL WL+ SNSCPLCRTKLE
Sbjct: 203 VYHKFCILKWLQMSNSCPLCRTKLE 222

BLAST of MS020181 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.0e-39
Identity = 98/222 (44.14%), Postives = 135/222 (60.81%), Query Frame = 0

Query: 1   MPFDTSSTVRFCLHGGAAAVSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPS 60
           MP   +ST+R+ L     A        Q L  RL   SRLISRSP+AG+P+ IL+ETP +
Sbjct: 1   MPLANASTLRYSLRRNHGA-------DQFLRFRLCYSSRLISRSPSAGLPYDILEETPST 60

Query: 61  PVADAAFVLPLR---DPLFLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAAS 120
           P+ADA F LPLR   DPLF  AY+ +L+ SLNL + +C  I ++I S V + A  +  A 
Sbjct: 61  PMADALFPLPLRELEDPLFCHAYLIELVSSLNLDSMSCNPIVQKITSLVTQWAAVDYDAK 120

Query: 121 LHIVALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKV----EEGVELGDCSVCLN- 180
             +VA ++YI+ FW++  P  V       E  +  LK+ +V    ++G+   +CSVC   
Sbjct: 121 FQLVADIDYIQMFWMEKRPGSVGRGVMVEEKVV--LKEAEVAAAEKQGIGGEECSVCYES 180

Query: 181 ---EMNGGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKL 212
              E  G R+V +IPCGHV+H+SCILTW ++SNSCPLCR KL
Sbjct: 181 YEAEKGGEREVAKIPCGHVFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of MS020181 vs. ExPASy TrEMBL
Match: A0A6J1G7Z5 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC111451666 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 97/205 (47.32%), Postives = 121/205 (59.02%), Query Frame = 0

Query: 20  VSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPSPVADAAFVLPLRD----PL 79
           V+S  QP Q+LE+RL   + LISRS       QILQ+TP +P+ DA F   LRD    P 
Sbjct: 23  VASDQQPMQLLELRLGNSTHLISRS-----SRQILQQTPTTPMGDALFPFVLRDLQHPPF 82

Query: 80  FLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPI 139
               YV Q L S ++P  AC  I   I+SF ++LA GN   + HIV  V+ IE  W+D  
Sbjct: 83  LSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHIVVEVDVIEMIWVDLD 142

Query: 140 PAPV-----PPSGGAAESAISRLKKEK---VEEGVELGDCSVCLNEMNGGRQVIRIPCGH 199
           P  V         GA  SAI RL++++   + E  E GDCSVC   + G  +V RIPCGH
Sbjct: 143 PFLVEEYSPAEMNGAPASAIERLQRQEFDGLREEEEEGDCSVCCEALKGEEEVSRIPCGH 202

Query: 200 VYHESCILTWLRKSNSCPLCRTKLE 213
           VYH+ CIL WL+ SNSCPLCRTKLE
Sbjct: 203 VYHKCCILKWLQMSNSCPLCRTKLE 222

BLAST of MS020181 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36
Identity = 94/222 (42.34%), Postives = 134/222 (60.36%), Query Frame = 0

Query: 1   MPFDTSSTVRFCLHGGAAAVSSGDQPHQVLEVRLKRLSRLISRSPAAGVPHQILQETPPS 60
           MPF  +ST+R+ L     A        Q+L++RL   SRLISRSP+AG+P+ IL+ETP +
Sbjct: 1   MPFANASTLRYSLRRNHGA-------DQLLQLRLGYSSRLISRSPSAGLPYDILEETPST 60

Query: 61  PVADAAFVLPLR---DPLFLEAYVRQLLCSLNLPAGACGAIGRRIASFVVELAGGNSAAS 120
           P+ADA F LPLR   DPLF  AY+ +L+ S NL +     I ++I SFV + A  +  A 
Sbjct: 61  PMADALFPLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQWAAVDYDAK 120

Query: 121 LHIVALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKV----EEGVELGDCSVCLN- 180
             +VA ++YI+ FW++     V       E  +  L++  V    ++G+   +CSVC   
Sbjct: 121 FQLVADIDYIQMFWMEKHRGSVGRGVMVEERVV--LEETGVAAAEKQGIGGEECSVCYES 180

Query: 181 ---EMNGGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTKL 212
              E  G ++V +IPCGH +H+SCILTW ++SNSCPLCR KL
Sbjct: 181 YEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of MS020181 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-13
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 133 DPIPAPVPPSGGAAESAISRLKKEKVEEGVELGDCSVCLNEMNGGRQVIRIPCGHVYHES 192
           DP     PP+  +A  A+  +K  K     E+  C+VC++E   G  V ++PC HV+H+ 
Sbjct: 182 DPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQD 241

Query: 193 CILTWLRKSNSCPLCRTKL 212
           C+L WL   NSCP+CR +L
Sbjct: 242 CLLPWLELHNSCPVCRFEL 260

BLAST of MS020181 vs. TAIR 10
Match: AT5G54990.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-13
Identity = 24/45 (53.33%), Postives = 35/45 (77.78%), Query Frame = 0

Query: 166 DCSVCLNEMNGGRQVIRIPCGHVYHESCILTWLRKSNSCPLCRTK 211
           DC +CL E++ G   +++PC HV+H  CI+TWL+K+ SCP+CRTK
Sbjct: 173 DCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTK 217

BLAST of MS020181 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0

Query: 122 ALVNYIEEFWLDPIPAPVPPSGGAAESAISRLKKEKVEE---GVELGDCSVCLNEMNGGR 181
           +L   IE+   D  P P P    A+E  I+ L   K+       ++  C+VC+ E   G 
Sbjct: 180 SLEQLIEQLTQDDRPGPPP----ASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGG 239

Query: 182 QVIRIPCGHVYHESCILTWLRKSNSCPLCRTKL 212
               +PC H+YH+ CI+ WLR +NSCP+CR  L
Sbjct: 240 DATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

BLAST of MS020181 vs. TAIR 10
Match: AT4G05350.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.2e-12
Identity = 51/199 (25.63%), Postives = 92/199 (46.23%), Query Frame = 0

Query: 22  SGDQPHQVLEVRLKRLS-RLISRSPAAGVPHQILQETPPSPVADAAFVLPLRDPLFLEAY 81
           S  +P+ V+ +RLK  S  +I  +   G  ++  Q +PP       F++ +        +
Sbjct: 20  SPSEPNSVI-IRLKTKSVEIIIENQTTGRQNRRTQVSPP-------FLIDINLRSSSHDH 79

Query: 82  VRQL----LCSLNLPAGACGAIGRRIASFVVELAGGNSAASLHIVALVNYIEEFWLDPIP 141
           +R L    L      +  C  +  +I++  ++L  G++  +L + A V Y        + 
Sbjct: 80  IRTLLHDRLVGYPFESYLCDDLAPKISTAAIDLGFGHNGFTLTMAATVTY------RTVS 139

Query: 142 APVPPSGGAAESAISRLKKEKVEE-GVELGDCSVCLNEMNGG---RQVIRIPCGHVYHES 201
                        + R+K E+ +   +E   CS+CL  +  G   R V R+ C HV+H  
Sbjct: 140 VMSNDEKSLRMVLLGRMKAEEFKSLKMETEPCSICLESLVSGPKPRDVTRMTCSHVFHNG 199

Query: 202 CILTWLRKSNSCPLCRTKL 212
           C+L WL++ N+CPLCRT++
Sbjct: 200 CLLEWLKRKNTCPLCRTEI 204

BLAST of MS020181 vs. TAIR 10
Match: AT4G12190.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 0

Query: 150 ISRLKKEKVEE-GVELGDCSVCLNEMNGG---RQVIRIPCGHVYHESCILTWLRKSNSCP 209
           + R+K E+++   +E   CS+CL  +  G   R + R+ C HV+H  C+L WL++ N+CP
Sbjct: 4   LGRIKTEELKSLKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCP 63

Query: 210 LCRTKL 212
           LCRT+L
Sbjct: 64  LCRTEL 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151640.11.3e-7168.98E3 ubiquitin-protein ligase RNF181-like [Momordica charantia][more]
XP_023539480.19.2e-4650.24E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo][more]
XP_023539471.11.7e-4447.53uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo][more]
KAG6596836.12.0e-4045.05hypothetical protein SDJN03_10016, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023006826.16.4e-3947.80E3 ubiquitin-protein ligase RNF126-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q8LPN75.3e-1239.24E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
P0CH307.7e-1135.44E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
Q9VE617.7e-1139.18E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN... [more]
Q5M9741.0e-1042.17E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 ... [more]
Q6AVN21.0e-1043.04E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI... [more]
Match NameE-valueIdentityDescription
A0A6J1DBR56.2e-7268.98E3 ubiquitin-protein ligase RNF181-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1KYV13.1e-3947.80E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499... [more]
A0A6J1L1864.0e-3944.14NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4... [more]
A0A6J1G7Z51.2e-3847.32E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1G7L11.4e-3642.34NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE... [more]
Match NameE-valueIdentityDescription
AT3G19950.13.8e-1339.24RING/U-box superfamily protein [more]
AT5G54990.16.4e-1353.33RING/U-box superfamily protein [more]
AT1G60360.11.4e-1236.56RING/U-box superfamily protein [more]
AT4G05350.14.2e-1225.63RING/U-box superfamily protein [more]
AT4G12190.11.6e-1140.91RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 167..207
e-value: 1.0E-8
score: 44.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 166..208
e-value: 2.6E-15
score: 56.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 167..208
score: 13.374458
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 141..212
e-value: 1.3E-20
score: 74.8
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 81..212
NoneNo IPR availablePANTHERPTHR45931:SF9E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKEcoord: 81..212
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 166..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020181.1MS020181.1mRNA