MS020127 (gene) Bitter gourd (TR) v1

Overview
NameMS020127
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc-finger homeodomain protein 10-like
Locationscaffold22: 1897957 .. 1898430 (-)
RNA-Seq ExpressionMS020127
SyntenyMS020127
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCGAACTACCATTACAGAGAATGCCTTCGAAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACGACGCCTCCTCTCCGCCCAACCACCTCCACTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAACTCACCTACATCGTCGCCCCACGCGCCTCCGCCTCCGACGACGCCCTCAACATCGACTACGACCGCCACGCCGTCGTCGAGTACTCCCCCGCCGCCGACACCGGAAAGAAGCGCTTCCGCACAAAGTTCACGCCCGATCAGAAGGACAAGATGCTCGCATTTGCCGAGAAATTGGGCTGGAAGCTGCAGAGGAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAAAATGCCTTCTCTTCTACTTCTGCAGCTTCCACT

mRNA sequence

AACTCGAACTACCATTACAGAGAATGCCTTCGAAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACGACGCCTCCTCTCCGCCCAACCACCTCCACTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAACTCACCTACATCGTCGCCCCACGCGCCTCCGCCTCCGACGACGCCCTCAACATCGACTACGACCGCCACGCCGTCGTCGAGTACTCCCCCGCCGCCGACACCGGAAAGAAGCGCTTCCGCACAAAGTTCACGCCCGATCAGAAGGACAAGATGCTCGCATTTGCCGAGAAATTGGGCTGGAAGCTGCAGAGGAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAAAATGCCTTCTCTTCTACTTCTGCAGCTTCCACT

Coding sequence (CDS)

AACTCGAACTACCATTACAGAGAATGCCTTCGAAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACGACGCCTCCTCTCCGCCCAACCACCTCCACTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAACTCACCTACATCGTCGCCCCACGCGCCTCCGCCTCCGACGACGCCCTCAACATCGACTACGACCGCCACGCCGTCGTCGAGTACTCCCCCGCCGCCGACACCGGAAAGAAGCGCTTCCGCACAAAGTTCACGCCCGATCAGAAGGACAAGATGCTCGCATTTGCCGAGAAATTGGGCTGGAAGCTGCAGAGGAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAAAATGCCTTCTCTTCTACTTCTGCAGCTTCCACT

Protein sequence

NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVAPRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST
Homology
BLAST of MS020127 vs. NCBI nr
Match: XP_022137470.1 (zinc-finger homeodomain protein 10-like [Momordica charantia])

HSP 1 Score: 334.0 bits (855), Expect = 7.2e-88
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 64

Query: 61  PRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKD 120
           PRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKD
Sbjct: 65  PRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKD 124

Query: 121 LDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 159
           LDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST
Sbjct: 125 LDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 162

BLAST of MS020127 vs. NCBI nr
Match: XP_038895089.1 (zinc-finger homeodomain protein 9-like [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 2.9e-68
Identity = 136/169 (80.47%), Postives = 146/169 (86.39%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIV- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSP N LHCAACGCHRNFHRK+TYI  
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  ---APRASASDDALNIDYDRHAVVEYSPAADT--------GKKRFRTKFTPDQKDKMLAF 120
              +  A+A+DD L +DYDRHAVVEY+ AADT         KKRFRTKFT DQK+KMLAF
Sbjct: 65  GGRSSAATATDDDL-MDYDRHAVVEYA-AADTERSGGGGGSKKRFRTKFTADQKEKMLAF 124

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAST 171

BLAST of MS020127 vs. NCBI nr
Match: XP_004137520.1 (zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical protein Csa_014376 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 3.7e-68
Identity = 135/167 (80.84%), Postives = 146/167 (87.43%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIV- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+TYI  
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  ---APRASASDDALNIDYDRHAVVEYSPAADT------GKKRFRTKFTPDQKDKMLAFAE 120
              +  A+A+DD L +DYDRHAVVEY+ AADT       KKRFRTKFT DQK+KMLAFAE
Sbjct: 65  GGRSSAATATDDDL-MDYDRHAVVEYA-AADTERSGGGSKKRFRTKFTADQKEKMLAFAE 124

Query: 121 KLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           KLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 KLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAST 169

BLAST of MS020127 vs. NCBI nr
Match: XP_008467173.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 8.3e-68
Identity = 135/169 (79.88%), Postives = 146/169 (86.39%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIV- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+TYI  
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  ----APRASASDDALNIDYDRHAVVEYSPAADT-------GKKRFRTKFTPDQKDKMLAF 120
               +  A+A+DD L +DYDRHAVVEY+ AADT        KKRFRTKFT DQK+KMLAF
Sbjct: 65  GGGRSSAATATDDDL-MDYDRHAVVEYA-AADTERSGGGGSKKRFRTKFTVDQKEKMLAF 124

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAST 171

BLAST of MS020127 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 127/162 (78.40%), Postives = 143/162 (88.27%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 60
           NS+YHYRECLRNHAA+LGSYATDGCGEFTLDD SSP N L+CAAC CHRNFHRK+TYI  
Sbjct: 5   NSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACSCHRNFHRKVTYIGG 64

Query: 61  PR--ASASDDALNI-DYDRHAVVEYSPAADTG--KKRFRTKFTPDQKDKMLAFAEKLGWK 120
               +SA+  A N+ DYDRHA+VEY+ AADTG  KKRFRTKFT DQK+KMLAFAE+LGWK
Sbjct: 65  GGRFSSAAPTADNLMDYDRHAIVEYA-AADTGGSKKRFRTKFTTDQKEKMLAFAERLGWK 124

Query: 121 LQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           LQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 LQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSAST 165

BLAST of MS020127 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-33
Identity = 79/168 (47.02%), Postives = 96/168 (57.14%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVAPRASA 65
           YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  +  RA  
Sbjct: 49  YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHR 108

Query: 66  SDDALNIDYDRHAVVEY----SPAA------------DTGK--------KRFRTKFTPDQ 125
                N     H    Y    SPAA            DT          KRFRTKFT +Q
Sbjct: 109 VPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTKFTAEQ 168

Query: 126 KDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNA 150
           K+KMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KN+
Sbjct: 169 KEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

BLAST of MS020127 vs. ExPASy Swiss-Prot
Match: A2XLF4 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32
Identity = 79/172 (45.93%), Postives = 96/172 (55.81%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           YREC+RNHAA LG+YA DGC E+T DD    P  L CAACGCHRNFHRK           
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDDGH--PAGLLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 66  -----LTYIVAPRASASDDALNIDYDRHAVVEYS---------PAADTGKKRFRTKFTPD 125
                    VAP   A        Y   A +  +              G++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 126 QKDKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHK 148
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHK 181

BLAST of MS020127 vs. ExPASy Swiss-Prot
Match: Q10DV5 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32
Identity = 79/172 (45.93%), Postives = 96/172 (55.81%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           YREC+RNHAA LG+YA DGC E+T DD    P  L CAACGCHRNFHRK           
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDDGH--PAGLLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 66  -----LTYIVAPRASASDDALNIDYDRHAVVEYS---------PAADTGKKRFRTKFTPD 125
                    VAP   A        Y   A +  +              G++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 126 QKDKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHK 148
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHK 181

BLAST of MS020127 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-31
Identity = 78/214 (36.45%), Postives = 109/214 (50.93%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSP--PNHLHCAACGCHRNFHRKLT-- 60
           N+   Y+ECL+NHAA++G +A DGCGEF    +S+P  P  L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 61  -YIVAPRA--SASDDALNIDYDRH------------------------------------ 120
              V P +   +S     I+Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 121 -------------AVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDE 159
                        A   +  A    +KRFRTKF+ +QK+KM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

BLAST of MS020127 vs. ExPASy Swiss-Prot
Match: B8AX53 (Zinc-finger homeodomain protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD6 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-31
Identity = 75/199 (37.69%), Postives = 102/199 (51.26%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           Y ECLRNHAA++G +  DGCGEF +       + L CAACGCHR+FHRK           
Sbjct: 45  YHECLRNHAAAMGGHVVDGCGEF-MPMPGDAADALKCAACGCHRSFHRKDDGQQQQQLRL 104

Query: 66  -----------------------------------LTYIVAPRASASDDALNIDYDRHAV 125
                                                Y   P  S      +   +R   
Sbjct: 105 LIPSPPTPRVPLLMPPPQPQPHPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGPP 164

Query: 126 VEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVF 159
              + AA   +KRFRTKFTP+QK++MLAFAE++GW++Q++D +  +E+FC  VGV RQVF
Sbjct: 165 SSSAAAAQGRRKRFRTKFTPEQKEQMLAFAERVGWRMQKQD-EALVEQFCAQVGVRRQVF 224

BLAST of MS020127 vs. ExPASy TrEMBL
Match: A0A6J1C6R0 (zinc-finger homeodomain protein 10-like OS=Momordica charantia OX=3673 GN=LOC111008907 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.5e-88
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 64

Query: 61  PRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKD 120
           PRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKD
Sbjct: 65  PRASASDDALNIDYDRHAVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKD 124

Query: 121 LDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 159
           LDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST
Sbjct: 125 LDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 162

BLAST of MS020127 vs. ExPASy TrEMBL
Match: A0A0A0LQK4 (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 135/167 (80.84%), Postives = 146/167 (87.43%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIV- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+TYI  
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  ---APRASASDDALNIDYDRHAVVEYSPAADT------GKKRFRTKFTPDQKDKMLAFAE 120
              +  A+A+DD L +DYDRHAVVEY+ AADT       KKRFRTKFT DQK+KMLAFAE
Sbjct: 65  GGRSSAATATDDDL-MDYDRHAVVEYA-AADTERSGGGSKKRFRTKFTADQKEKMLAFAE 124

Query: 121 KLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           KLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 KLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAST 169

BLAST of MS020127 vs. ExPASy TrEMBL
Match: A0A1S3CU70 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 135/169 (79.88%), Postives = 146/169 (86.39%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIV- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+TYI  
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  ----APRASASDDALNIDYDRHAVVEYSPAADT-------GKKRFRTKFTPDQKDKMLAF 120
               +  A+A+DD L +DYDRHAVVEY+ AADT        KKRFRTKFT DQK+KMLAF
Sbjct: 65  GGGRSSAATATDDDL-MDYDRHAVVEYA-AADTERSGGGGSKKRFRTKFTVDQKEKMLAF 124

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAST 171

BLAST of MS020127 vs. ExPASy TrEMBL
Match: A0A6J1K6H9 (zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490534 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 126/162 (77.78%), Postives = 142/162 (87.65%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 60
           NS+YHYRECLRNHAA+LGSYATDGCGEFTLDD SSP N L+CAAC CHRNFHRK+TYI  
Sbjct: 5   NSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVTYIGG 64

Query: 61  PR--ASASDDALNI-DYDRHAVVEYSPAADTG--KKRFRTKFTPDQKDKMLAFAEKLGWK 120
               +SA+  A N+ DYDRHA+VEY+ A DTG  KKRFRTKFT DQK+KMLAFAE+LGWK
Sbjct: 65  SGRFSSAAPTADNLMDYDRHAIVEYA-ATDTGGSKKRFRTKFTTDQKEKMLAFAERLGWK 124

Query: 121 LQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           LQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 LQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSAST 165

BLAST of MS020127 vs. ExPASy TrEMBL
Match: A0A6J1GRQ0 (zinc-finger homeodomain protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111456901 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.5e-64
Identity = 126/164 (76.83%), Postives = 143/164 (87.20%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 60
           NS+YHYRECLRNHAA+LGSYATDGCGEFTLDD SSP N L+CAAC CHRNFHRK+TYI  
Sbjct: 5   NSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPGNQLYCAACSCHRNFHRKVTYIGG 64

Query: 61  PR----ASASDDALNI-DYDRHAVVEYSPAADTG--KKRFRTKFTPDQKDKMLAFAEKLG 120
                 +SA+  A N+ DY+RHA+VEY+ AADTG  KKRFRTKFT DQK+KMLAFAE+LG
Sbjct: 65  GGGGRFSSAAPTADNLMDYERHAIVEYA-AADTGGSKKRFRTKFTTDQKEKMLAFAERLG 124

Query: 121 WKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAS 158
           WKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKN+FSS SA++
Sbjct: 125 WKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSAST 167

BLAST of MS020127 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 79/168 (47.02%), Postives = 96/168 (57.14%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVAPRASA 65
           YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  +  RA  
Sbjct: 49  YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHR 108

Query: 66  SDDALNIDYDRHAVVEY----SPAA------------DTGK--------KRFRTKFTPDQ 125
                N     H    Y    SPAA            DT          KRFRTKFT +Q
Sbjct: 109 VPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTKFTAEQ 168

Query: 126 KDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNA 150
           K+KMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KN+
Sbjct: 169 KEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

BLAST of MS020127 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 78/214 (36.45%), Postives = 109/214 (50.93%), Query Frame = 0

Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSP--PNHLHCAACGCHRNFHRKLT-- 60
           N+   Y+ECL+NHAA++G +A DGCGEF    +S+P  P  L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 61  -YIVAPRA--SASDDALNIDYDRH------------------------------------ 120
              V P +   +S     I+Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 121 -------------AVVEYSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDE 159
                        A   +  A    +KRFRTKF+ +QK+KM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

BLAST of MS020127 vs. TAIR 10
Match: AT1G14440.1 (homeobox protein 31 )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 76/190 (40.00%), Postives = 95/190 (50.00%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           Y+ECL+NHAA++G  ATDGCGEF           L C+AC CHRNFHRK           
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 66  ---------------------------------LTYIVAPRASASDDALNIDYDRHAVVE 125
                                              Y      S S+D +  D    A   
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 126 YSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKV 152
                   KKRFRTKFTP+QK+KML+FAEK+GWK+QR++ D  ++RFC  +GV R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

BLAST of MS020127 vs. TAIR 10
Match: AT1G14440.2 (homeobox protein 31 )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 76/190 (40.00%), Postives = 95/190 (50.00%), Query Frame = 0

Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           Y+ECL+NHAA++G  ATDGCGEF           L C+AC CHRNFHRK           
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 66  ---------------------------------LTYIVAPRASASDDALNIDYDRHAVVE 125
                                              Y      S S+D +  D    A   
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 126 YSPAADTGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKV 152
                   KKRFRTKFTP+QK+KML+FAEK+GWK+QR++ D  ++RFC  +GV R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

BLAST of MS020127 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 75/184 (40.76%), Postives = 100/184 (54.35%), Query Frame = 0

Query: 2   SNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK-LTYI-V 61
           S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK L Y   
Sbjct: 71  SRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHH 130

Query: 62  APRASASDDALNIDYDRHAVVEYSP---------------------------AADTG--- 121
           AP            Y   A V Y P                           +A+ G   
Sbjct: 131 APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAGGGI 190

Query: 122 KKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNA 154
           +KR RTKFT +QK++MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+K+ 
Sbjct: 191 RKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNNKHT 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022137470.17.2e-88100.00zinc-finger homeodomain protein 10-like [Momordica charantia][more]
XP_038895089.12.9e-6880.47zinc-finger homeodomain protein 9-like [Benincasa hispida][more]
XP_004137520.13.7e-6880.84zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical pro... [more]
XP_008467173.18.3e-6879.88PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo][more]
XP_023542338.11.1e-6478.40zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9SB611.8e-3347.02Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S... [more]
A2XLF41.5e-3245.93Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD... [more]
Q10DV51.5e-3245.93Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Z... [more]
Q9LHF01.7e-3136.45Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S... [more]
B8AX536.5e-3137.69Zinc-finger homeodomain protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD6... [more]
Match NameE-valueIdentityDescription
A0A6J1C6R03.5e-88100.00zinc-finger homeodomain protein 10-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A0A0LQK41.8e-6880.84Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430... [more]
A0A1S3CU704.0e-6879.88zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P... [more]
A0A6J1K6H91.2e-6477.78zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490... [more]
A0A6J1GRQ03.5e-6476.83zinc-finger homeodomain protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
Match NameE-valueIdentityDescription
AT4G24660.11.3e-3447.02homeobox protein 22 [more]
AT3G28920.11.2e-3236.45homeobox protein 34 [more]
AT1G14440.11.3e-3140.00homeobox protein 31 [more]
AT1G14440.21.3e-3140.00homeobox protein 31 [more]
AT5G65410.11.1e-3040.76homeobox protein 25 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 5..54
e-value: 8.1E-23
score: 78.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 4..55
e-value: 1.3E-24
score: 86.3
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 6..55
score: 23.218397
IPR006455Homeodomain, ZF-HD classTIGRFAMTIGR01565TIGR01565coord: 90..148
e-value: 4.9E-28
score: 94.8
NoneNo IPR availableGENE3D1.10.10.60coord: 79..154
e-value: 3.0E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR31948:SF16ZINC-FINGER HOMEODOMAIN PROTEIN 11coord: 3..153
NoneNo IPR availablePANTHERPTHR31948ZINC-FINGER HOMEODOMAIN PROTEIN 2coord: 3..153
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 83..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020127.1MS020127.1mRNA