MS020120 (gene) Bitter gourd (TR) v1

Overview


Name	MS020120
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LysM domain-containing protein
Location	scaffold22: 1853114 .. 1856144 (-)
RNA-Seq Expression	MS020120
Synteny	MS020120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCCGTCGAATAGTTCGGCAAGTGGAATTAGTGGGCATGGAGGACCGAATTACATAGAGCATCAAATTTCCAGAATGGATACTCTCGCCGGCATCGCCATTAAGTACGGAGTCGAGGTAAACCTTTCACTTTCTTTTCTTTTTTTTCTTTTTTTTTTTTTGTTTATTGTTCAGCCGGTGTAGTTTTTATGTTCTCTTTGATTGTGTTTTTCCGAAGTGCTGGCGATTCTTTCTATTGTGATGCCAGACCAGACCAATGGTTGGCGGCACATCTAATTTGATTTTGTGAGCTCTGGAAAATCGGTGTTTAAGTTTATTGTTATCTCTGCACGCAAATGGAATTGAAGTGCATCTCGATTTTCTGGACATTTCGAAATCTTCGAATTTAGAATCCGATGAGAAGGTGATTTCAGCACGTCTTATTGCAGAAATATTTATCAACTATCAAACGCTATTTCAATTTTCGCACATGTATATTGTGAACATAATAGTTCAATTGCAAGGATTCAATTGAATCATGTGTTTAATTTCGTTTGGAAACATAAAAAGGCTAACATTATGACGAAATATTTGCGTGTTTTTGTGATTCCAATCCTATAAGCTGTGCTACTCTACTAGACGTAATTTAACTATGTTCTGTTGCCCCACTTCAGCTCTGAACTTCATTGGTTTGGAGGTGACTTTTGGTCGGTTGCATTTGGCTGAGTGGCAAAGATGATCAAGCGAAACAGTGGAAAGTTCGTATTAGATTTTATTTGCTCACAATCTCGTTAACTAAAATGCCAGGGTGTCCGTATGAATAAATAAATCTTTTTTTTGTAATTTTCCATTATCGTCTTGCTTGCTGAAGTTTCCCTCATATTCTTTTAAACTGTAATGTATCTTGAATATATAAAATTCTAGCGAGGTTGTTAGCAAGGTCATGCTTACTGAGAAGTTAGTTTGAATAATCATCCCCAAATGGTTGATCCTAGATTCACTTGTCAATCTATTTGTCACTGTTATGCTTTCTTCTTGTGATGTAATATTTGTTTATCCCACCCTAATGCTCTTAATTTCATTACTCGTTGACTCTCTAAAATATATAGGTGGCTGACATCAAGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAACTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCAAGCTTGTCTGATGCTTCTGTCATTACAGGGTATTATTTGCTGGGAATTTCTACTAGAATTTATTTCTATTTGTGATTTGTGATTAAGCTTTCAGTTTGCCTATGTTTACTGCTCATATCTCATGTGCTAAAGCCTGACTTAGTCAAGTCAATTGGCGGAATCCTAAAGTAAATTTAGGATATACACATTGAAGCTTGGGTTGGGGGTGGGAAATGGGAACCTTGAGAATCTTATTGTTGCTCCACTGCATATTTTTAGGAATCAAGGAACTACTCGTGTGCTTAGTTAATTTCAAATGACAGATCTGTTGAGTAGGATTATGACACTGTCCGAGCCACCCTAACAACTTAAGGTGCAACAAATACCTTTACTAGTTTGTAAATTTAAGGCAGCGGTGATAATAAGATTTGCCATCAAATACCTTTCATTCCTAGAGGATGTAATATCCGTTTGAAGTATAGTGTTTCACTACTTTCTTTTTTAATGGTCGAACTTTCCGTCATAAAGATTCAACACATCATGTTGTTTCATTTAAAGCAGATATTTGACATTTGAGAATTTTGATCATTTCCAATTTCTTGGAGATTTCAACCGACTTACCTTCCTTTATTTGAAAATTTTCTTGATAGATAAGTCCTATTTGTTCTGGAAGTAGTAATGTTAGTTGAACATAGGTTAGACTGCAGTAGTTGTTTAAGAAACTAATTATCGTTCGACTTCCTAGAGATATTGTAGTTATTGATTTGAGTCAGATTATTTTACAGGACTTGTATAAATCATTATGCATAATTTGAGCATCTACCATGTTGATATTCGTTGCACAAAGTTAGTAATTATTGGATAGCACCACGGTAACAATTTCCCTTTATAAAGAAGGGAGGCAATATTCCTTTCTTTTTTCTTGTTTTGTTATTCATATATCTGCACTTTTGGGATGGTATAATCTGTTCACCATGGACCATAGATTGAACATTTCCCAGAAAATCTATAATTCAGGTTTATCTGATCTATTTTGCCAAATGTATTGCAGAAGTGGACCTGTAAATGAAGAACCTCTACATTTAGGCCAACCTACTAGTATGCTGAACTCCTTGCAATCTCTGAGATTGAAACCACCTAACCAGAAAGCCTCCTCTGCCATGAGCACATTACAAAAATACTATGGCCTAAAATCTCAAACTCTCGAGCGTGCATCTGAAGGTATGGAGATGGCAGTATATAGAACTGAAAACTCAAATGGCAATGATGATGGGTTGTTTCTCAGAACCTCTGTGCTTTCTATGCCACCTCCGAACATTCACCCAAAGAACAGGAAATATGCTGGTAGTTTCTTTCCTGAGAATGACTCAATAACCGAACACCTACTACTTGCAGAACCTGGAGATGGAGAGAGTGAGAAATCTGATGAGAAGTTAGTTCGAAGGCGTCAAAAGACTGAAGTTGACAATGGGATTGGTACCCCAGAGAGATTGTTGAAGGGCGAAAATAGCGGTGGAGGCTATTTTTCCGCTGCTTCAAATGGAAAGGGTTTAGCCATGAGGCCAAAATCAGTTAGCAGATCCATGCTGCTACCAGATACAGATCCGGTATGGATAAATTCCATTCCAGTAGGATTAGGAGATGCTATAATTACCGATGGCATTTCAGAAGTTCATAAATCATCAAGTACATCAAACCTGAGAGACCAAGATAGCAATAATTCAGCATCCGTGTGGCCAACTACAAAGTGGAGTTTGAAGCCAGATTTGCAAGCTCTCTCAAGTGTTGCAATCTCAAAACCCCTATTTGATGGTCTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGAT

mRNA sequence

ATGTCCCCGTCGAATAGTTCGGCAAGTGGAATTAGTGGGCATGGAGGACCGAATTACATAGAGCATCAAATTTCCAGAATGGATACTCTCGCCGGCATCGCCATTAAGTACGGAGTCGAGGTGGCTGACATCAAGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAACTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCAAGCTTGTCTGATGCTTCTGTCATTACAGGAAGTGGACCTGTAAATGAAGAACCTCTACATTTAGGCCAACCTACTAGTATGCTGAACTCCTTGCAATCTCTGAGATTGAAACCACCTAACCAGAAAGCCTCCTCTGCCATGAGCACATTACAAAAATACTATGGCCTAAAATCTCAAACTCTCGAGCGTGCATCTGAAGGTATGGAGATGGCAGTATATAGAACTGAAAACTCAAATGGCAATGATGATGGGTTGTTTCTCAGAACCTCTGTGCTTTCTATGCCACCTCCGAACATTCACCCAAAGAACAGGAAATATGCTGGTAGTTTCTTTCCTGAGAATGACTCAATAACCGAACACCTACTACTTGCAGAACCTGGAGATGGAGAGAGTGAGAAATCTGATGAGAAGTTAGTTCGAAGGCGTCAAAAGACTGAAGTTGACAATGGGATTGGTACCCCAGAGAGATTGTTGAAGGGCGAAAATAGCGGTGGAGGCTATTTTTCCGCTGCTTCAAATGGAAAGGGTTTAGCCATGAGGCCAAAATCAGTTAGCAGATCCATGCTGCTACCAGATACAGATCCGGTATGGATAAATTCCATTCCAGTAGGATTAGGAGATGCTATAATTACCGATGGCATTTCAGAAGTTCATAAATCATCAAGTACATCAAACCTGAGAGACCAAGATAGCAATAATTCAGCATCCGTGTGGCCAACTACAAAGTGGAGTTTGAAGCCAGATTTGCAAGCTCTCTCAAGTGTTGCAATCTCAAAACCCCTATTTGATGGTCTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGAT

Coding sequence (CDS)

ATGTCCCCGTCGAATAGTTCGGCAAGTGGAATTAGTGGGCATGGAGGACCGAATTACATAGAGCATCAAATTTCCAGAATGGATACTCTCGCCGGCATCGCCATTAAGTACGGAGTCGAGGTGGCTGACATCAAGAGGTTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAACTGAGAATTCCTCTACCAGGAAGACATCCACCATCACCAAGCTTGTCTGATGCTTCTGTCATTACAGGAAGTGGACCTGTAAATGAAGAACCTCTACATTTAGGCCAACCTACTAGTATGCTGAACTCCTTGCAATCTCTGAGATTGAAACCACCTAACCAGAAAGCCTCCTCTGCCATGAGCACATTACAAAAATACTATGGCCTAAAATCTCAAACTCTCGAGCGTGCATCTGAAGGTATGGAGATGGCAGTATATAGAACTGAAAACTCAAATGGCAATGATGATGGGTTGTTTCTCAGAACCTCTGTGCTTTCTATGCCACCTCCGAACATTCACCCAAAGAACAGGAAATATGCTGGTAGTTTCTTTCCTGAGAATGACTCAATAACCGAACACCTACTACTTGCAGAACCTGGAGATGGAGAGAGTGAGAAATCTGATGAGAAGTTAGTTCGAAGGCGTCAAAAGACTGAAGTTGACAATGGGATTGGTACCCCAGAGAGATTGTTGAAGGGCGAAAATAGCGGTGGAGGCTATTTTTCCGCTGCTTCAAATGGAAAGGGTTTAGCCATGAGGCCAAAATCAGTTAGCAGATCCATGCTGCTACCAGATACAGATCCGGTATGGATAAATTCCATTCCAGTAGGATTAGGAGATGCTATAATTACCGATGGCATTTCAGAAGTTCATAAATCATCAAGTACATCAAACCTGAGAGACCAAGATAGCAATAATTCAGCATCCGTGTGGCCAACTACAAAGTGGAGTTTGAAGCCAGATTTGCAAGCTCTCTCAAGTGTTGCAATCTCAAAACCCCTATTTGATGGTCTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGAT

Protein sequence

MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD

Homology

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BLAST of MS020120 vs. NCBI nr
Match: XP_022137657.1 (uncharacterized protein LOC111009048 isoform X1 [Momordica charantia])

HSP 1 Score: 687.6 bits (1773), Expect = 5.8e-194
Identity = 352/353 (99.72%), Postives = 352/353 (99.72%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRH PSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA
Sbjct: 61  KLRIPLPGRHLPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY
Sbjct: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG
Sbjct: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL
Sbjct: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300

Query: 301 RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353

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BLAST of MS020120 vs. NCBI nr
Match: XP_022137658.1 (uncharacterized protein LOC111009048 isoform X2 [Momordica charantia] >XP_022137659.1 uncharacterized protein LOC111009048 isoform X2 [Momordica charantia] >XP_022137660.1 uncharacterized protein LOC111009048 isoform X2 [Momordica charantia] >XP_022137661.1 uncharacterized protein LOC111009048 isoform X2 [Momordica charantia])

HSP 1 Score: 582.4 bits (1500), Expect = 2.6e-162
Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 56  MFALKKLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQ 115
           MFALKKLRIPLPGRH PSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQ
Sbjct: 1   MFALKKLRIPLPGRHLPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQ 60

Query: 116 KASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHP 175
           KASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHP
Sbjct: 61  KASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHP 120

Query: 176 KNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGE 235
           KNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGE
Sbjct: 121 KNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGE 180

Query: 236 NSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSS 295
           NSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSS
Sbjct: 181 NSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSS 240

Query: 296 STSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           STSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 241 STSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 298

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BLAST of MS020120 vs. NCBI nr
Match: XP_038894003.1 (uncharacterized protein LOC120082771 isoform X1 [Benincasa hispida])

HSP 1 Score: 576.6 bits (1485), Expect = 1.4e-160
Identity = 303/354 (85.59%), Postives = 322/354 (90.96%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSN+S++G+SGHGG NYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK
Sbjct: 1   MSPSNTSSTGVSGHGGTNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDA-SVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASS 120
           KLRIPLPGRHPPSPSLSDA SVITG+G VNEEPLHLGQPTSMLNSLQ+ RLK P+QKAS 
Sbjct: 61  KLRIPLPGRHPPSPSLSDASSVITGNGSVNEEPLHLGQPTSMLNSLQTWRLKSPSQKASP 120

Query: 121 AMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRK 180
           AMSTLQKYYGL SQT E A   MEM+VYRTENSN   DGLF RTSVLS PPPNI+PK RK
Sbjct: 121 AMSTLQKYYGLSSQTPESAPVDMEMSVYRTENSNSIGDGLFSRTSVLSTPPPNIYPKTRK 180

Query: 181 YAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGG 240
           YAGSF+ ENDSITEHLL AEPGDGE+EKSDEKLVRRRQK EVDNG+ TPER LKGENS G
Sbjct: 181 YAGSFWTENDSITEHLLRAEPGDGENEKSDEKLVRRRQKAEVDNGVTTPERPLKGENSSG 240

Query: 241 GYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSN 300
            YFS +SNGK LAMR KSVSR+M+L D+DPV INSIPVGLGDA+ITDGISEVHKS STSN
Sbjct: 241 SYFS-SSNGKSLAMRLKSVSRTMMLSDSDPVRINSIPVGLGDAVITDGISEVHKSLSTSN 300

Query: 301 LRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           LRDQDS+NSASVW TTKWSLKPDLQALSSVAI+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 LRDQDSSNSASVWSTTKWSLKPDLQALSSVAITKPLFDGLPNPITGRRNKAALD 353

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BLAST of MS020120 vs. NCBI nr
Match: KAG6572989.1 (LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 567.0 bits (1460), Expect = 1.1e-157
Identity = 299/356 (83.99%), Postives = 318/356 (89.33%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSS+SG+SGHGGPNYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRHPPSPSLSDAS +TGSG VNEEPLHLGQPT MLNSLQS RLK PN KAS A
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGL S+T+E A EGMEMA+YRTENSN  DDGLF +TS LS PP NIH K RKY
Sbjct: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFVDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGSF+PENDSITEHLL  EPGDGE+EKSDEKLVRRRQK E  NG+GTPER  KGENSGG 
Sbjct: 181 AGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTPERSSKGENSGGS 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           +FS  SNGK LAMR KSVSRSMLL D+DPV INSIPVGLGDAIITDGISEVHKS STSNL
Sbjct: 241 FFS-GSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300

Query: 301 RDQD---SNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQD   S++SASVW TT+WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDSSGSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 353

[Close]

BLAST of MS020120 vs. NCBI nr
Match: XP_022994944.1 (uncharacterized protein LOC111490532 [Cucurbita maxima])

HSP 1 Score: 562.0 bits (1447), Expect = 3.7e-156
Identity = 296/355 (83.38%), Postives = 316/355 (89.01%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSS+SG+SGHGGPNYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRHPPSPSLSDAS +TGSG VNEEPLHLGQPT MLNSLQS RLK PN KAS A
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGL S+T+E A +GMEMA+Y+TENSN  DDGLF +TS LS PP NIH K RKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGS +PENDSITEHLL  EPGDGESEKSDEKLVRRRQK E  NG+G PER  KGENSGG 
Sbjct: 181 AGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAE--NGVGAPERSSKGENSGGS 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           +FS  SNGK LAMR KSVSRSMLL D+DPV INSIPVGLGDAIITDGISEVHKS STSNL
Sbjct: 241 FFS-GSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300

Query: 301 RDQD--SNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQD  S++SASVW TT+WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of MS020120 vs. ExPASy Swiss-Prot
Match: Q6P606 (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rerio OX=7955 GN=lysmd4 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.4e-06
Identity = 51/183 (27.87%), Postives = 84/183 (45.90%), Query Frame = 0


Query: 5   NSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRI 64
           +SS+    G G    +E  IS  D L+ +A++YG +VADIKR+N L  +  M+ALK ++I
Sbjct: 55  DSSSKEKEGVGEMLLLERDISHEDNLSKLALQYGCKVADIKRVNNLFQEQDMYALKSIKI 114

Query: 65  PLPGR------------------HPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQ 124
           P+                     H  +PS S  + ++G   V E   +L +   + N ++
Sbjct: 115 PVRKHGLLTEAISELRTPQQRPSHDAAPSNSAMASVSGRPQVQEYTNYLKE---VDNDIE 174

Query: 125 SLRLKPPN-QKASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSV 169
            L     N ++  SA S + + +G +SQ L                SNG D G+    +V
Sbjct: 175 RLIQNTDNVEEVFSASSRVSRGWGWRSQRL---------------RSNGADWGIQWWNAV 219

[Close]

BLAST of MS020120 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.0e-04
Identity = 35/100 (35.00%), Postives = 48/100 (48.00%), Query Frame = 0


Query: 4   SNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLR 63
           S  S + ++      YIEH++S  DTL GIA+KYGV +  IKR N L +   +F  K L 
Sbjct: 45  SYGSTASVAAPLSERYIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLN 104

Query: 64  IPLPGRHPPSPSLSDASVITGSG----PVNEEPLHLGQPT 100
           IP+  +          S+  G G    P NE   +   PT
Sbjct: 105 IPVISK--------KGSLFNGLGSLDSPENETQDNCNSPT 136

[Close]

BLAST of MS020120 vs. ExPASy Swiss-Prot
Match: A0JNI1 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos taurus OX=9913 GN=LYSMD1 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 20 IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRIPL 67
          +EHQ++  DTLAG+A+KYGV +  IKR N L  +  +F  K L IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIPI 86

[Close]

BLAST of MS020120 vs. ExPASy Swiss-Prot
Match: Q99LE3 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Lysmd3 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 28/83 (33.73%), Postives = 41/83 (49.40%), Query Frame = 0


Query: 24  ISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRI-------------PLPGRH 83
           I   DTL  +A++Y   VADIKR+N L +D   FAL+ ++I             PL GRH
Sbjct: 69  IQEGDTLNAVALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKRFSSLTETLHPLKGRH 128

Query: 84  ----PPSPSLSDASVITGSGPVN 90
               PP P   +  ++   G ++
Sbjct: 129 ILHPPPVPYFQEQDIVPADGSLS 151

[Close]

BLAST of MS020120 vs. ExPASy Swiss-Prot
Match: Q96S90 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LYSMD1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 20 IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRIPL 67
          +EHQ+   DTLAG+A+KYGV +  IKR N L  +  +F  K L IP+
Sbjct: 40 LEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86

[Close]

BLAST of MS020120 vs. ExPASy TrEMBL
Match: A0A6J1C8W2 (uncharacterized protein LOC111009048 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009048 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 2.8e-194
Identity = 352/353 (99.72%), Postives = 352/353 (99.72%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK
Sbjct: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRH PSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA
Sbjct: 61  KLRIPLPGRHLPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY
Sbjct: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG
Sbjct: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL
Sbjct: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300

Query: 301 RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 353

[Close]

BLAST of MS020120 vs. ExPASy TrEMBL
Match: A0A6J1C797 (uncharacterized protein LOC111009048 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009048 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.3e-162
Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 56  MFALKKLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQ 115
           MFALKKLRIPLPGRH PSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQ
Sbjct: 1   MFALKKLRIPLPGRHLPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQ 60

Query: 116 KASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHP 175
           KASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHP
Sbjct: 61  KASSAMSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHP 120

Query: 176 KNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGE 235
           KNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGE
Sbjct: 121 KNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGE 180

Query: 236 NSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSS 295
           NSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSS
Sbjct: 181 NSGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSS 240

Query: 296 STSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           STSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 241 STSNLRDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 298

[Close]

BLAST of MS020120 vs. ExPASy TrEMBL
Match: A0A6J1K4A2 (uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.8e-156
Identity = 296/355 (83.38%), Postives = 316/355 (89.01%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSS+SG+SGHGGPNYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRHPPSPSLSDAS +TGSG VNEEPLHLGQPT MLNSLQS RLK PN KAS A
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGL S+T+E A +GMEMA+Y+TENSN  DDGLF +TS LS PP NIH K RKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGS +PENDSITEHLL  EPGDGESEKSDEKLVRRRQK E  NG+G PER  KGENSGG 
Sbjct: 181 AGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAE--NGVGAPERSSKGENSGGS 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           +FS  SNGK LAMR KSVSRSMLL D+DPV INSIPVGLGDAIITDGISEVHKS STSNL
Sbjct: 241 FFS-GSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300

Query: 301 RDQD--SNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQD  S++SASVW TT+WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of MS020120 vs. ExPASy TrEMBL
Match: A0A6J1GR40 (uncharacterized protein LOC111456756 OS=Cucurbita moschata OX=3662 GN=LOC111456756 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.8e-156
Identity = 295/355 (83.10%), Postives = 316/355 (89.01%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSS+SG+SGHGGPNYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRHPPSPSLSDAS +TGSG VNEEPLHLGQPT MLNS  S RLK PN KAS A
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSSPSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGL S+T+E A EGMEMA+YRTE+SN  DDGLF +TS LS PP NIH K RKY
Sbjct: 121 MSTLQKYYGLVSRTVENAPEGMEMALYRTEDSNFIDDGLFPKTSELSTPPSNIHSKTRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGSF+PEN+SITEHLL  EPGDGE+EKSDEKLVRRRQK E  NG+GTPER  KGENS GG
Sbjct: 181 AGSFWPENESITEHLLCTEPGDGENEKSDEKLVRRRQKAE--NGVGTPERSSKGENSSGG 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           +FS  SNGK LAMR KSVSRSMLL D+DPV INSIPVGLGDAIITDGISEVHKS STSNL
Sbjct: 241 FFS-GSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNL 300

Query: 301 RDQD--SNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQD  S++SASVW TT+WSLKPDLQALSS +I+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of MS020120 vs. ExPASy TrEMBL
Match: A0A0A0LQZ4 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.3e-155
Identity = 292/353 (82.72%), Postives = 309/353 (87.54%), Query Frame = 0


Query: 1   MSPSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 60
           MSPSNSS SG++GHGG NYIEHQISRMDTLAGIAIKYGVEVADI+RLNGLAADLQMFALK
Sbjct: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KLRIPLPGRHPPSPSLSDASVITGSGPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 120
           KLRIPLPGRHPPSPSLSD S +TG+G VNEEPLHLGQPT+MLNSLQS RLK PNQKAS A
Sbjct: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 180
           MSTLQKYYGL SQTLE +S  MEM+VYRTENSN   DGLF RTSVLS PP NI+ K RKY
Sbjct: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIYSKTRKY 180

Query: 181 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGENSGGG 240
           AGSF+ +NDSITEHLL  + GD ESEKSDEKLVRRRQK EVDNG+ T ER LKGENS G 
Sbjct: 181 AGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGN 240

Query: 241 YFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSNL 300
           YFS  SNGK LAMR KS SR+ LL D+DPVWINSIPVGLGD IITDG SEVHKS STSNL
Sbjct: 241 YFS-PSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSNL 300

Query: 301 RDQDSNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           RDQD++NS SVW T KWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD
Sbjct: 301 RDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of MS020120 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-71
Identity = 172/365 (47.12%), Postives = 222/365 (60.82%), Query Frame = 0


Query: 3   PSNSSASGISGHGGPN--YIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALK 62
           P +SS+    G   P+  YIEH+IS+ DTLAG+AIKYGVEVAD+K++N L  DLQMFALK
Sbjct: 59  PPSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALK 118

Query: 63  KLRIPLPGRHPPSPSLSDASVITGSG---PVNEEPLHLGQPTSMLNSLQSLRLKPPNQKA 122
            L+IPLPGRHPPSP LS+ S+  G G      E P H  Q   + +S QSLRLK   +K 
Sbjct: 119 SLQIPLPGRHPPSPCLSNGSLNHGEGCSCHEPESPNHSEQ--EVFDSFQSLRLKSSEKKV 178

Query: 123 SSAMSTLQKYYGLKSQTLERASEG-MEMAVYRTENSN---GNDDGLFLRTSVLSMPPPNI 182
           S AM +LQ YYGLK      +  G  EM  Y+TE S+    N D  +LR    +  P N 
Sbjct: 179 SPAMYSLQGYYGLKPADRTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPLNH 238

Query: 183 HPKNRKYAGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLK 242
           H K+R    +   E +          P +   E + +K +RRRQK+E D    TPE +LK
Sbjct: 239 HRKSRSLVNALIEEVNQ--------SPDNNTQEPTSDKFMRRRQKSEADFSSRTPELVLK 298

Query: 243 GEN--SGGGYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEV 302
            EN  S GG+ S A  GKGLA+R K+ SR+ L  +++    N + + L DA ++D  S V
Sbjct: 299 EENGSSNGGFLSIA--GKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSFSSV 358

Query: 303 HKSSSTSNLRDQD---SNNSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRN 354
            KSSS S+L+D D   +N S S+WPT+KWSLKPDL  L+  AI+  +FDGLP P+TGRRN
Sbjct: 359 RKSSSASSLQDPDGNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKPLTGRRN 409

[Close]

BLAST of MS020120 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 259.6 bits (662), Expect = 3.6e-69
Identity = 169/355 (47.61%), Postives = 221/355 (62.25%), Query Frame = 0


Query: 3   PSNSSASGISGHGGPNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKL 62
           P++S  S  S   G  YIEH++S+ DTLAGIAIKYGVEVADI +LNGL  DLQMFAL+ L
Sbjct: 55  PTSSPPSSASTCAG--YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESL 114

Query: 63  RIPLPGRHPPSPSLSDASVITGS--GPVNEEPLHLGQPTSMLNSLQSLRLKPPNQKASSA 122
           RIPLPGRHPPSP LS+ S+  G             G    + +S QSLRL    +K S A
Sbjct: 115 RIPLPGRHPPSPCLSNGSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKKISPA 174

Query: 123 MSTLQKYYGLKSQTLERASEGMEMAVYRTENSNGNDDGLFLRTSVLSMPPPNIHPKNRKY 182
           M++LQ YYGLK +   RASEG  MAVY+ E S   D+  +L     +  P + H K+R  
Sbjct: 175 MNSLQGYYGLKPKN-RRASEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSL 234

Query: 183 AGSFFPENDSITEHLLLAEPGDGESEKSDEKLVRRRQKTEVDNGIGTPERLLKGEN-SGG 242
             +   E   + +    ++ G GE   +D K +RRRQK+E D     PE LLK EN S  
Sbjct: 235 VDAVIAE---VNQSPNPSKAGGGEVNSTD-KPMRRRQKSEADFSSRAPELLLKEENRSSS 294

Query: 243 GYFSAASNGKGLAMRPKSVSRSMLLPDTDPVWINSIPVGLGDAIITDGISEVHKSSSTSN 302
           G FSA + GK LA+R K+ SR+ L  +T    +NSIP+ L DA + D  S V KS S S+
Sbjct: 295 GAFSAIA-GKNLALRSKASSRANLSAETR--HLNSIPINLMDAPVGDSFSSVRKSVSASS 354

Query: 303 LRDQDSN-NSASVWPTTKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 354
           L++ + N N +S+WPT+KW+LKP+L  L+ VA++  +FDGLP P+TGRRNK A+D
Sbjct: 355 LQEPNCNSNGSSLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNKKAVD 397

[Close]

BLAST of MS020120 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05
Identity = 20/47 (42.55%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRIPL 67
           I H+I R D++  +A+KY V+V DIKRLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of MS020120 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05
Identity = 20/47 (42.55%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRIPL 67
           I H+I R D++  +A+KY V+V DIKRLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of MS020120 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05
Identity = 20/47 (42.55%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQMFALKKLRIPL 67
           I H+I R D++  +A+KY V+V DIKRLN + +D  +++  +L IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

The following BLAST results are available for this feature:

BLAST of MS020120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137657.1	5.8e-194	99.72	uncharacterized protein LOC111009048 isoform X1 [Momordica charantia]	[more]
XP_022137658.1	2.6e-162	99.66	uncharacterized protein LOC111009048 isoform X2 [Momordica charantia] >XP_022137...	[more]
XP_038894003.1	1.4e-160	85.59	uncharacterized protein LOC120082771 isoform X1 [Benincasa hispida]	[more]
KAG6572989.1	1.1e-157	83.99	LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cu...	[more]
XP_022994944.1	3.7e-156	83.38	uncharacterized protein LOC111490532 [Cucurbita maxima]	[more]

BLAST of MS020120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P606	9.4e-06	27.87	LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rer...	[more]
Q3B7I8	1.0e-04	35.00	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus t...	[more]
A0JNI1	1.4e-04	48.94	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos tauru...	[more]
Q99LE3	2.3e-04	33.73	LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus muscu...	[more]
Q96S90	3.0e-04	48.94	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Homo sapi...	[more]

BLAST of MS020120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8W2	2.8e-194	99.72	uncharacterized protein LOC111009048 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C797	1.3e-162	99.66	uncharacterized protein LOC111009048 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K4A2	1.8e-156	83.38	uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532...	[more]
A0A6J1GR40	8.8e-156	83.10	uncharacterized protein LOC111456756 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A0A0LQZ4	3.3e-155	82.72	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 S...	[more]

BLAST of MS020120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08200.1	1.3e-71	47.12	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	3.6e-69	47.61	Peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.1	3.7e-05	42.55	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	3.7e-05	42.55	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	3.7e-05	42.55	peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 21..65 e-value: 6.4E-4 score: 29.0
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 28..65 e-value: 1.4E-4 score: 21.8
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 20..64 score: 10.652882
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 20..64 e-value: 7.92234E-8 score: 46.3245
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 11..72 e-value: 3.5E-13 score: 50.9
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 20..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..220
None	No IPR available	PANTHER	PTHR20932:SF36	PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN	coord: 6..353
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 6..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020120.1	MS020120.1	mRNA