MS020115 (gene) Bitter gourd (TR) v1

Overview
NameMS020115
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein kinase domain-containing protein
Locationscaffold22: 1807706 .. 1807818 (-)
RNA-Seq ExpressionMS020115
SyntenyMS020115
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAATCCATTATTCTCTTTTCTCCCTACCTGCGATCCAGTACCTCAACCTATGTAATAACCAATTAAGTGGGATACTCTTGTTTACAACACAACTTGCAACAAAAACCTCAAA

mRNA sequence

CCAATCCATTATTCTCTTTTCTCCCTACCTGCGATCCAGTACCTCAACCTATGTAATAACCAATTAAGTGGGCTTGTTTACAACACAACTTGCAACAAAAACCTCAAA

Coding sequence (CDS)

CCAATCCATTATTCTCTTTTCTCCCTACCTGCGATCCAGTACCTCAACCTATGTAATAACCAATTAAGTGGGCTTGTTTACAACACAACTTGCAACAAAAACCTCAAA

Protein sequence

PIHYSLFSLPAIQYLNLCNNQLSGLVYNTTCNKNLK
Homology
[Close]
BLAST of MS020115 vs. NCBI nr
Match: XP_022945377.1 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X1 [Cucurbita moschata])

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. NCBI nr
Match: XP_022945378.1 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X2 [Cucurbita moschata])

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. NCBI nr
Match: XP_022968032.1 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Cucurbita maxima])

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. NCBI nr
Match: KAG7013159.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 290 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 326

[Close]
BLAST of MS020115 vs. NCBI nr
Match: XP_038892101.1 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Benincasa hispida])

HSP 1 Score: 56.2 bits (134), Expect = 6.6e-05
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPA+QYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHASLFSLPAVQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. ExPASy TrEMBL
Match: A0A6J1HSD9 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Cucurbita maxima OX=3661 GN=LOC111467399 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. ExPASy TrEMBL
Match: A0A6J1G0N3 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449630 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. ExPASy TrEMBL
Match: A0A6J1G0R3 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449630 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-05
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPAIQYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHSSLFSLPAIQYLNLAYNQLSGALSVNTTCNRNLK 290

[Close]
BLAST of MS020115 vs. ExPASy TrEMBL
Match: A0A5A7SWZ7 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004020 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-05
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPA+QYLNL  NQLSG L  NTTCN+NLK
Sbjct: 281 PIHASLFSLPAVQYLNLAYNQLSGALSVNTTCNRNLK 317

[Close]
BLAST of MS020115 vs. ExPASy TrEMBL
Match: A0A1S3BES8 (probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Cucumis melo OX=3656 GN=LOC103489094 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-05
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1   PIHYSLFSLPAIQYLNLCNNQLSG-LVYNTTCNKNLK 37
           PIH SLFSLPA+QYLNL  NQLSG L  NTTCN+NLK
Sbjct: 254 PIHASLFSLPAVQYLNLAYNQLSGALSVNTTCNRNLK 290

The following BLAST results are available for this feature:
BLAST of MS020115 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945377.15.1e-0581.08probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X1 ... [more]
XP_022945378.15.1e-0581.08probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X2 ... [more]
XP_022968032.15.1e-0581.08probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Cucurbita ... [more]
KAG7013159.15.1e-0581.08putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita a... [more]
XP_038892101.16.6e-0578.38probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Benincasa ... [more]
BLAST of MS020115 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS020115 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HSD92.5e-0581.08probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Cucurbit... [more]
A0A6J1G0N32.5e-0581.08probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X2 ... [more]
A0A6J1G0R32.5e-0581.08probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X1 ... [more]
A0A5A7SWZ73.2e-0578.38Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. ... [more]
A0A1S3BES83.2e-0578.38probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Cucumis ... [more]
BLAST of MS020115 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020115.1MS020115.1mRNA