MS020043 (gene) Bitter gourd (TR) v1

Overview


Name	MS020043
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Polysacc_synt_4 domain-containing protein
Location	scaffold22: 1365737 .. 1366164 (-)
RNA-Seq Expression	MS020043
Synteny	MS020043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCCTCTCTCCGCCAACACCAAGCTTATCTTCCACCACCCCTCCATCCGCAAGAAAGGCCTCTCCGCCCCTCGCCGCTGCCTCTTCTCTTTCCTCACCTTCTTCACTCTCGCCTTCACCCTCACCCTCATCAACTCCGCCTTCTCCTCCACTACGCCGCCGCCGACACGAACTCCATCAAGCCCCACATGAGATCCGGCGAGCTTTCCTCCATCGCCGCCGCCCTCGCCCCGTGCTCCCCGACCTGTAATTTCCTTATCTTCGGCCTCAATCACGAATCCCTCCTCTGGCGCGCCTCAACCACCGTCTTCCTCGACGGGAACGAGTTCCAGGTCTCCAAATTCGAGCAATCGAATCCCGACTCCGAAGCCTACGATGTCCAATACACGACCAAAGTCAGCCAGATGAAGGAGCTCCTGATTCAGGCC

mRNA sequence

TTGCCTCTCTCCGCCAACACCAAGCTTATCTTCCACCACCCCTCCATCCGCAAGAAAGGCCTCTCCGCCCCTCGCCGCTGCCTCTTCTCTTTCCTCACCTTCTTCACTCTCGCCTTCACCCTCACCCTCATCAACTCCGCCTTCCTCCACTACGCCGCCGCCGACACGAACTCCATCAAGCCCCACATGAGATCCGGCGAGCTTTCCTCCATCGCCGCCGCCCTCGCCCCGTGCTCCCCGACCTGTAATTTCCTTATCTTCGGCCTCAATCACGAATCCCTCCTCTGGCGCGCCTCAACCACCGTCTTCCTCGACGGGAACGAGTTCCAGGTCTCCAAATTCGAGCAATCGAATCCCGACTCCGAAGCCTACGATGTCCAATACACGACCAAAGTCAGCCAGATGAAGGAGCTCCTGATTCAGGCC

Coding sequence (CDS)

TTGCCTCTCTCCGCCAACACCAAGCTTATCTTCCACCACCCCTCCATCCGCAAGAAAGGCCTCTCCGCCCCTCGCCGCTGCCTCTTCTCTTTCCTCACCTTCTTCACTCTCGCCTTCACCCTCACCCTCATCAACTCCGCCTTCCTCCACTACGCCGCCGCCGACACGAACTCCATCAAGCCCCACATGAGATCCGGCGAGCTTTCCTCCATCGCCGCCGCCCTCGCCCCGTGCTCCCCGACCTGTAATTTCCTTATCTTCGGCCTCAATCACGAATCCCTCCTCTGGCGCGCCTCAACCACCGTCTTCCTCGACGGGAACGAGTTCCAGGTCTCCAAATTCGAGCAATCGAATCCCGACTCCGAAGCCTACGATGTCCAATACACGACCAAAGTCAGCCAGATGAAGGAGCTCCTGATTCAGGCC

Protein sequence

LPLSANTKLIFHHPSIRKKGLSAPRRCLFSFLTFFTLAFTLTLINSAFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIFGLNHESLLWRASTTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA

Homology

[Close]

BLAST of MS020043 vs. NCBI nr
Match: XP_022155585.1 (protein IRX15-LIKE-like [Momordica charantia])

HSP 1 Score: 218.4 bits (555), Expect = 4.0e-53
Identity = 125/179 (69.83%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLS-------APRRCLFSFLTFFTLAFTLTLINSAF-------- 63
           SAN KLI  HPSI K+GLS       APRRCLFSFLTFFTLAFTLTLINS F        
Sbjct: 4   SANAKLILLHPSIHKQGLSTPTAAAAAPRRCLFSFLTFFTLAFTLTLINSTFSSSSSSSS 63

Query: 64  ---------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIF 123
                                LHYAAADTNS KPHM SGELSSIAAALAPCSP CNFLIF
Sbjct: 64  AAARRTSSAASPLPIPISAALLHYAAADTNSTKPHMTSGELSSIAAALAPCSPACNFLIF 123

Query: 124 GLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           GLNHESLLWRA      TVFLD NEFQVSKFEQSNP SEAYDVQYTTKVSQMKELL+QA
Sbjct: 124 GLNHESLLWRALNHRGATVFLDENEFQVSKFEQSNPGSEAYDVQYTTKVSQMKELLVQA 182

[Close]

BLAST of MS020043 vs. NCBI nr
Match: XP_022972516.1 (protein IRX15-LIKE-like [Cucurbita maxima])

HSP 1 Score: 198.4 bits (503), Expect = 4.3e-47
Identity = 115/180 (63.89%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSA-----------PRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+GL+A           PRR LFSFLTFFTLAFTLTLINS F    
Sbjct: 4   AANAKLILLHPSIHKQGLAAPTAATGGAALTPRRWLFSFLTFFTLAFTLTLINSTFSAAD 63

Query: 64  ----------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLI 123
                                 +HYAA DTNS KPHM + ELSSIAAAL+PCSP CNFLI
Sbjct: 64  RRRSVGGPADSPVLPQPISVALIHYAAVDTNSTKPHMTTAELSSIAAALSPCSPACNFLI 123

Query: 124 FGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           FGL HESLLWRA      TVFLD NEF VSKFEQSNP  EAYDVQYTTKVSQMKELLIQA
Sbjct: 124 FGLTHESLLWRALNHGGVTVFLDENEFHVSKFEQSNPGIEAYDVQYTTKVSQMKELLIQA 183

[Close]

BLAST of MS020043 vs. NCBI nr
Match: KAG6571959.1 (Protein IRX15-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197.2 bits (500), Expect = 9.5e-47
Identity = 114/180 (63.33%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSA-----------PRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+GL+A           PRR LFSFLTFFTL FTLTLINS F    
Sbjct: 4   AANAKLILLHPSIHKQGLAAPTAATGGAALTPRRWLFSFLTFFTLVFTLTLINSTFSAAD 63

Query: 64  ----------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLI 123
                                 +HYAA DTNS KPHM + ELSSIAAAL+PCSP+CNFLI
Sbjct: 64  RRRSVGSPADSPVLPQPISAALIHYAAVDTNSTKPHMTTAELSSIAAALSPCSPSCNFLI 123

Query: 124 FGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           FGL HESLLWRA      TVFLD NEF VSKFEQSNP  EAYDVQYTTKVSQMKELLIQA
Sbjct: 124 FGLTHESLLWRALNHGGVTVFLDENEFHVSKFEQSNPGIEAYDVQYTTKVSQMKELLIQA 183

[Close]

BLAST of MS020043 vs. NCBI nr
Match: KAG7011645.1 (Protein IRX15-LIKE protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 114/180 (63.33%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSA-----------PRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+GL+A           PRR LFSFLTFFTL FTLTLINS F    
Sbjct: 4   AANAKLILLHPSIHKQGLAAPTAATGGAALTPRRWLFSFLTFFTLVFTLTLINSTFSAAD 63

Query: 64  ----------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLI 123
                                 +HYAA DTNS KPHM + ELSSIAAAL+PCSP CNFLI
Sbjct: 64  RRRSVGSPADSPVLPQPISAALIHYAAVDTNSTKPHMTTAELSSIAAALSPCSPACNFLI 123

Query: 124 FGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           FGL HESLLWRA      TVFLD NEF VSKFEQSNP  EAYDVQYTTKVSQMKELLIQA
Sbjct: 124 FGLTHESLLWRALNHGGVTVFLDENEFHVSKFEQSNPGIEAYDVQYTTKVSQMKELLIQA 183

[Close]

BLAST of MS020043 vs. NCBI nr
Match: XP_023553830.1 (protein IRX15-LIKE-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 114/180 (63.33%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSA-----------PRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+GL+A           PRR LFSFLTFFTL FTLTLINS F    
Sbjct: 4   AANAKLILLHPSIHKQGLAAPTAATGGAALTPRRWLFSFLTFFTLVFTLTLINSTFSAAD 63

Query: 64  ----------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLI 123
                                 +HYAA DTNS KPHM + ELSSIAAAL+PCSP CNFLI
Sbjct: 64  RRRSVGGPADSPVLPQPISAALIHYAAVDTNSTKPHMTTAELSSIAAALSPCSPACNFLI 123

Query: 124 FGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           FGL HESLLWRA      TVFLD NEF VSKFEQSNP  EAYDVQYTTKVSQMKELLIQA
Sbjct: 124 FGLTHESLLWRALNHGGVTVFLDENEFHVSKFEQSNPGIEAYDVQYTTKVSQMKELLIQA 183

[Close]

BLAST of MS020043 vs. ExPASy Swiss-Prot
Match: Q9FH92 (Protein IRX15-LIKE OS=Arabidopsis thaliana OX=3702 GN=IRX15-L PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSAPRRCLFSFLTFFTLAFTLTL-------------------- 63
           + NTKLI  HP I+K+  S  R  L +F++FFT+AF LTL                    
Sbjct: 6   NTNTKLILVHPYIQKQ-TSTNRLWLLAFVSFFTIAFLLTLLYTTDSIISSKNNSATVSSA 65

Query: 64  INS----------------AFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIF 123
           +NS                A LHYA+   +S   HM  GE+ SI+  L  CSP CN L+F
Sbjct: 66  VNSAVTTATISQLPTTAINAMLHYASRSNDSY--HMSYGEMKSISDVLRRCSPPCNLLVF 125

Query: 124 GLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
           GL HE+LLW++      TVF++ N +  + FE+ +P+ E +DVQYTTK  + +EL+
Sbjct: 126 GLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREARELV 178

[Close]

BLAST of MS020043 vs. ExPASy Swiss-Prot
Match: Q9SNE5 (Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana OX=3702 GN=IRX15 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 63/185 (34.05%), Postives = 92/185 (49.73%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSAPRRCLFSFLTFFTLAFTLTLIN------------------ 63
           + NTKLI  HP I+K+  S  R  L +F++FFT+ F LTL+                   
Sbjct: 7   NTNTKLILLHPYIQKQ-TSTTRLWLLAFVSFFTIVFLLTLLYTRDTIPSKNTSVAAAVAA 66

Query: 64  ------------------------SAFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPT 123
                                   +A LHYA+   +S   HM  GE+ SI+  L  C+P 
Sbjct: 67  VVTGGSTPSASSPISNSNLPTSAINALLHYASRSNDSF--HMSYGEMKSISDVLRRCAPP 126

Query: 124 CNFLIFGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKE 143
           CN L+FGL HE+LLW++      TVF++ N +  + FE+ +P+ + +DVQYTTK  +  E
Sbjct: 127 CNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDVFDVQYTTKAHEAGE 186

[Close]

BLAST of MS020043 vs. ExPASy Swiss-Prot
Match: Q6NMK1 (Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GXM1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.9e-08
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 47  AFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIFGLNHESLLWRA----STTV 106
           A +HY+   T+ I P     E++  +  L   SP CNFL+FGL H+SL+W +      TV
Sbjct: 63  ALIHYS---TSVITPQQTLKEIAVSSRVLGKKSP-CNFLVFGLGHDSLMWSSLNYGGRTV 122

Query: 107 FLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
           FL+ +E  + + ++  P  E+Y V Y +KV+Q   L+
Sbjct: 123 FLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLI 155

[Close]

BLAST of MS020043 vs. ExPASy Swiss-Prot
Match: Q9T0F7 (Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GXM2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.9e-08
Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 42  TLINSAFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIFGLNHESLLW----R 101
           T ++ A +HY    T+ I P     E+S     L   SP CNFL+FGL H+SL+W     
Sbjct: 63  TSLSDALVHYV---TSEITPQQTFDEVSVSKRVLDKKSP-CNFLVFGLGHDSLMWASLNH 122

Query: 102 ASTTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
              T+FL+ +E  +    +  P+ E+Y V Y TKV    +L+
Sbjct: 123 GGRTLFLEEDEAWIETVTKKFPNLESYHVVYDTKVKDSNKLM 160

[Close]

BLAST of MS020043 vs. ExPASy Swiss-Prot
Match: Q9LQ32 (Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GXM3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.7e-07
Identity = 32/100 (32.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 44  INSAFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIFGLNHESLLW----RAS 103
           ++ A +HY    T+++ P     E+S     L   SP CNFL+FGL H+SL+W       
Sbjct: 73  LSDALVHYV---TSNVTPQQTFDEVSVSKRVLDKKSP-CNFLVFGLGHDSLMWASLNHGG 132

Query: 104 TTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
            T+F++ ++  ++   +  P+ E+Y V Y TKV    +L+
Sbjct: 133 RTLFIEEDQAWIAIVTKKFPNLESYHVVYDTKVKDSDKLM 168

[Close]

BLAST of MS020043 vs. ExPASy TrEMBL
Match: A0A6J1DMU5 (protein IRX15-LIKE-like OS=Momordica charantia OX=3673 GN=LOC111022684 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 125/179 (69.83%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLS-------APRRCLFSFLTFFTLAFTLTLINSAF-------- 63
           SAN KLI  HPSI K+GLS       APRRCLFSFLTFFTLAFTLTLINS F        
Sbjct: 4   SANAKLILLHPSIHKQGLSTPTAAAAAPRRCLFSFLTFFTLAFTLTLINSTFSSSSSSSS 63

Query: 64  ---------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIF 123
                                LHYAAADTNS KPHM SGELSSIAAALAPCSP CNFLIF
Sbjct: 64  AAARRTSSAASPLPIPISAALLHYAAADTNSTKPHMTSGELSSIAAALAPCSPACNFLIF 123

Query: 124 GLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           GLNHESLLWRA      TVFLD NEFQVSKFEQSNP SEAYDVQYTTKVSQMKELL+QA
Sbjct: 124 GLNHESLLWRALNHRGATVFLDENEFQVSKFEQSNPGSEAYDVQYTTKVSQMKELLVQA 182

[Close]

BLAST of MS020043 vs. ExPASy TrEMBL
Match: A0A6J1I666 (protein IRX15-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111471061 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.1e-47
Identity = 115/180 (63.89%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSA-----------PRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+GL+A           PRR LFSFLTFFTLAFTLTLINS F    
Sbjct: 4   AANAKLILLHPSIHKQGLAAPTAATGGAALTPRRWLFSFLTFFTLAFTLTLINSTFSAAD 63

Query: 64  ----------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLI 123
                                 +HYAA DTNS KPHM + ELSSIAAAL+PCSP CNFLI
Sbjct: 64  RRRSVGGPADSPVLPQPISVALIHYAAVDTNSTKPHMTTAELSSIAAALSPCSPACNFLI 123

Query: 124 FGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           FGL HESLLWRA      TVFLD NEF VSKFEQSNP  EAYDVQYTTKVSQMKELLIQA
Sbjct: 124 FGLTHESLLWRALNHGGVTVFLDENEFHVSKFEQSNPGIEAYDVQYTTKVSQMKELLIQA 183

[Close]

BLAST of MS020043 vs. ExPASy TrEMBL
Match: A0A6J1GJE6 (protein IRX15-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111454825 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.0e-47
Identity = 114/180 (63.33%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSA-----------PRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+GL+A           PRR LFSFLTFFTL FTLTLINS F    
Sbjct: 4   AANAKLILLHPSIHKQGLAAPTAATGGAALTPRRWLFSFLTFFTLVFTLTLINSTFSAAD 63

Query: 64  ----------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLI 123
                                 +HYAA DTNS KPHM + ELSSIAAAL+PCSP CNFLI
Sbjct: 64  RRRSVGSPADSPVLPQPISAALIHYAAVDTNSTKPHMTTAELSSIAAALSPCSPACNFLI 123

Query: 124 FGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELLIQA 143
           FGL HESLLWRA      TVFLD NEF VSKFEQSNP  EAYDVQYTTKVSQMKELLIQA
Sbjct: 124 FGLTHESLLWRALNHGGVTVFLDENEFHVSKFEQSNPGIEAYDVQYTTKVSQMKELLIQA 183

[Close]

BLAST of MS020043 vs. ExPASy TrEMBL
Match: A0A5A7SPS3 (Protein IRX15-LIKE-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00720 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.7e-46
Identity = 113/185 (61.08%), Postives = 121/185 (65.41%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLS-----------APRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+ L            +PRR LFSFLTFFTLAFTLTLINS F    
Sbjct: 4   TANAKLILLHPSIHKQPLPTSTPATGAPTLSPRRWLFSFLTFFTLAFTLTLINSTFSTST 63

Query: 64  ---------------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPT 123
                                      LHYAAADTNS KPHM + ELSSIAAAL+PC+P 
Sbjct: 64  ASRRSLAGHGPNVAASTALPHSISSALLHYAAADTNSTKPHMSTAELSSIAAALSPCAPA 123

Query: 124 CNFLIFGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKE 143
           CNFLIFGL HESLLWRA      TVFLD NEFQVSKFEQSNP +EAYDVQYTTKVS+MKE
Sbjct: 124 CNFLIFGLTHESLLWRALNHGGATVFLDENEFQVSKFEQSNPGTEAYDVQYTTKVSEMKE 183

[Close]

BLAST of MS020043 vs. ExPASy TrEMBL
Match: A0A1S3C105 (protein IRX15-LIKE-like OS=Cucumis melo OX=3656 GN=LOC103495257 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.7e-46
Identity = 113/185 (61.08%), Postives = 121/185 (65.41%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLS-----------APRRCLFSFLTFFTLAFTLTLINSAF---- 63
           +AN KLI  HPSI K+ L            +PRR LFSFLTFFTLAFTLTLINS F    
Sbjct: 4   TANAKLILLHPSIHKQPLPTSTPATGAPTLSPRRWLFSFLTFFTLAFTLTLINSTFSTST 63

Query: 64  ---------------------------LHYAAADTNSIKPHMRSGELSSIAAALAPCSPT 123
                                      LHYAAADTNS KPHM + ELSSIAAAL+PC+P 
Sbjct: 64  ASRRSLAGHGPNVAASTALPHSISSALLHYAAADTNSTKPHMSTAELSSIAAALSPCAPA 123

Query: 124 CNFLIFGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKE 143
           CNFLIFGL HESLLWRA      TVFLD NEFQVSKFEQSNP +EAYDVQYTTKVS+MKE
Sbjct: 124 CNFLIFGLTHESLLWRALNHGGATVFLDENEFQVSKFEQSNPGTEAYDVQYTTKVSEMKE 183

[Close]

BLAST of MS020043 vs. TAIR 10
Match: AT5G67210.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23
Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSAPRRCLFSFLTFFTLAFTLTL-------------------- 63
           + NTKLI  HP I+K+  S  R  L +F++FFT+AF LTL                    
Sbjct: 6   NTNTKLILVHPYIQKQ-TSTNRLWLLAFVSFFTIAFLLTLLYTTDSIISSKNNSATVSSA 65

Query: 64  INS----------------AFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIF 123
           +NS                A LHYA+   +S   HM  GE+ SI+  L  CSP CN L+F
Sbjct: 66  VNSAVTTATISQLPTTAINAMLHYASRSNDSY--HMSYGEMKSISDVLRRCSPPCNLLVF 125

Query: 124 GLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
           GL HE+LLW++      TVF++ N +  + FE+ +P+ E +DVQYTTK  + +EL+
Sbjct: 126 GLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREARELV 178

[Close]

BLAST of MS020043 vs. TAIR 10
Match: AT3G50220.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-21
Identity = 63/185 (34.05%), Postives = 92/185 (49.73%), Query Frame = 0


Query: 4   SANTKLIFHHPSIRKKGLSAPRRCLFSFLTFFTLAFTLTLIN------------------ 63
           + NTKLI  HP I+K+  S  R  L +F++FFT+ F LTL+                   
Sbjct: 7   NTNTKLILLHPYIQKQ-TSTTRLWLLAFVSFFTIVFLLTLLYTRDTIPSKNTSVAAAVAA 66

Query: 64  ------------------------SAFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPT 123
                                   +A LHYA+   +S   HM  GE+ SI+  L  C+P 
Sbjct: 67  VVTGGSTPSASSPISNSNLPTSAINALLHYASRSNDSF--HMSYGEMKSISDVLRRCAPP 126

Query: 124 CNFLIFGLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKE 143
           CN L+FGL HE+LLW++      TVF++ N +  + FE+ +P+ + +DVQYTTK  +  E
Sbjct: 127 CNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDVFDVQYTTKAHEAGE 186

[Close]

BLAST of MS020043 vs. TAIR 10
Match: AT2G15440.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 95.5 bits (236), Expect = 3.6e-20
Identity = 74/176 (42.05%), Postives = 92/176 (52.27%), Query Frame = 0


Query: 4   SANTKLIF--HHPSIRKKGLSA-----PRRCLF-SFLTFFTLAFTLTLINS--------- 63
           + NT LI   HH  +  K  SA       R LF  FL+FFTL F+ +L +S         
Sbjct: 4   NTNTNLILFHHHSPLTSKSPSAVAAANHHRFLFIFFLSFFTLLFSFSLFSSSIHSTTSSH 63

Query: 64  -----------------AFLHYAAADTNSIKPH--MRSGELSSIAAALAPCSPTCNFLIF 123
                            A LHY    T+S  P+  M   ELS+I+  +    P CN LIF
Sbjct: 64  SLSSSPSSSSLPPPVLAALLHY----TSSSPPNTSMSFLELSTISNIIHSHGPACNLLIF 123

Query: 124 GLNHESLLWRA----STTVFLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
           GL HESLLWR+      TVF+D + + VSKFEQSNP  EAY+V Y+TKVSQ K+LL
Sbjct: 124 GLTHESLLWRSINFQGRTVFVDESPYSVSKFEQSNPGVEAYEVVYSTKVSQAKKLL 175

[Close]

BLAST of MS020043 vs. TAIR 10
Match: AT1G71690.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 61.2 bits (147), Expect = 7.6e-10
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 47  AFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIFGLNHESLLW----RASTTV 106
           A +HYA   ++++ P     E+S     L   SP CNFL+FGL H+SL+W        T+
Sbjct: 75  ALVHYA---SSNVTPQQTLSEISVTKKELEKKSP-CNFLVFGLGHDSLMWATLNHGGRTI 134

Query: 107 FLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
           FLD +E  + +  +  P  E+Y V+Y TKV   + L+
Sbjct: 135 FLDEDESWIHQIAEKFPSLESYHVRYKTKVRDAEALM 167

[Close]

BLAST of MS020043 vs. TAIR 10
Match: AT1G09610.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-09
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 47  AFLHYAAADTNSIKPHMRSGELSSIAAALAPCSPTCNFLIFGLNHESLLWRA----STTV 106
           A +HY+   T+ I P     E++  +  L   SP CNFL+FGL H+SL+W +      TV
Sbjct: 63  ALIHYS---TSVITPQQTLKEIAVSSRVLGKKSP-CNFLVFGLGHDSLMWSSLNYGGRTV 122

Query: 107 FLDGNEFQVSKFEQSNPDSEAYDVQYTTKVSQMKELL 140
           FL+ +E  + + ++  P  E+Y V Y +KV+Q   L+
Sbjct: 123 FLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLI 155

The following BLAST results are available for this feature:

BLAST of MS020043 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155585.1	4.0e-53	69.83	protein IRX15-LIKE-like [Momordica charantia]	[more]
XP_022972516.1	4.3e-47	63.89	protein IRX15-LIKE-like [Cucurbita maxima]	[more]
KAG6571959.1	9.5e-47	63.33	Protein IRX15-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7011645.1	1.2e-46	63.33	Protein IRX15-LIKE protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023553830.1	1.2e-46	63.33	protein IRX15-LIKE-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS020043 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH92	1.1e-21	38.07	Protein IRX15-LIKE OS=Arabidopsis thaliana OX=3702 GN=IRX15-L PE=2 SV=1	[more]
Q9SNE5	1.0e-19	34.05	Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana OX=3702 GN=IRX15 PE=2 SV=1	[more]
Q6NMK1	6.9e-08	36.08	Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GXM1 P...	[more]
Q9T0F7	6.9e-08	35.29	Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GXM2 P...	[more]
Q9LQ32	7.7e-07	32.00	Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GXM3 P...	[more]

BLAST of MS020043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMU5	1.9e-53	69.83	protein IRX15-LIKE-like OS=Momordica charantia OX=3673 GN=LOC111022684 PE=4 SV=1	[more]
A0A6J1I666	2.1e-47	63.89	protein IRX15-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111471061 PE=4 SV=1	[more]
A0A6J1GJE6	6.0e-47	63.33	protein IRX15-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111454825 PE=4 SV=1	[more]
A0A5A7SPS3	8.7e-46	61.08	Protein IRX15-LIKE-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C105	8.7e-46	61.08	protein IRX15-LIKE-like OS=Cucumis melo OX=3656 GN=LOC103495257 PE=4 SV=1	[more]

BLAST of MS020043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67210.1	7.8e-23	38.07	Protein of unknown function (DUF579)	[more]
AT3G50220.1	7.3e-21	34.05	Protein of unknown function (DUF579)	[more]
AT2G15440.1	3.6e-20	42.05	Protein of unknown function (DUF579)	[more]
AT1G71690.1	7.6e-10	36.08	Protein of unknown function (DUF579)	[more]
AT1G09610.1	4.9e-09	36.08	Protein of unknown function (DUF579)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021148	Polysaccharide biosynthesis domain	PFAM	PF04669	Polysacc_synt_4	coord: 67..139 e-value: 1.3E-16 score: 60.8
IPR006514	IRX15/IRX15L/IGXM	PANTHER	PTHR31444	OS11G0490100 PROTEIN	coord: 6..140
None	No IPR available	PANTHER	PTHR31444:SF0	CDC2 PROTEIN KINASES-LIKE	coord: 6..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020043.1	MS020043.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045492	xylan biosynthetic process