MS019971 (gene) Bitter gourd (TR) v1

Overview


Name	MS019971
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA-(apurinic or apyrimidinic site) endonuclease
Location	scaffold22: 858251 .. 868247 (-)
RNA-Seq Expression	MS019971
Synteny	MS019971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGCTTCTTCAAGCCAATAGAGAAGGAGGGCTCTTCGAAGAAAGCGGCTCTCTCACCTTCGCTGAAAGATGGTGATGATTCTGAAGCATCGGCGCCGGACAAGAAAGAGCCTCTTAAATTTATAACTTGGAATGCCAATAGCTTACTTCTCCGAGTTAAGAACGACTGGCCGGAATTCACCAAGCTCGTCTCTAATCTTGATCCAGATGTCATCGCCATACAAGTAACTAGATTTCTGCCTCACTCTTTGCTTCACCTTGTGCGAAGTTGATAATAGACGCTGATATTTTGTTCTATTTTCCCTTGGTTTTGGTTGTCTTATGAATTTTCATGAATGTGTGTTTTGGGTATGTACTATTTGGGGATCATGCAAGATTTTTCACTAGTAAATGCGAGTTTCTTTTTCCCTTTTGTAGCTGCGAGGAATTGATGATTCCTGGAATGTGCTGGTGGCATGTTTTATACTGGTTTTTTGTTTTTCTGGCTGCAAGGAATTAGTTACTGGATGTGTTGGTTTAGTTGCTTAATTTGACACGTTTATCTTCCATCTTTCTCTCTCTCTTTTTTTCTTTAAGAAAGTTCATGCAATAGCTCTTTGAAATTTAATAAATCGCAAATCCTGTCAATGGTTTCTTTTAAGATGGGTGTGGATGCATGTGCACCTGATGATGTCATTTTTGACGTTTCTATCTCAGTGGGATATATGCTATAAGTTTTGTTATGCTGTGTTTTCAGTCATTAGATAAGCTTTATGGGGACGATGTCTTGATTTCACTTTTTCATAGTCTAGTATTTAACAATCATATGGCCGTGGTCCTGTATGGATTGAAGTCGATCAAATCAGTTATTTATTTGATTAATCCATCTCATACAGACTTCTTTATTCTAGTAGTCATCTGATACATTATCTTGTAGAACTACATAAGATGCAAATTATTCCCTTACATGGGCTATGACCTTATCATTGATTACTTCCACACTAGGAAGTAAGGATTCCTGCAGCAGGTTCAAAAGGTGCACCTAAAAACCAAGGAGAGTTGAAAGATGACACAAGCACATCACGTGAAGAGAAGCAGGTAAGATTGTTTTTTTTTTTTTTTTTTTTCTGTTACTAAAGGTTTCTGGATGAGCAAGAAAGTTGGATGTGTCGGGCAGGAAAGCGTGTGCACGCACTTTGAATTTAGTCTTGTTCTGTGCTGTTATTTAATTTTTGCATGAATAAACTTGTTAAGTAAAGCATGTGAAGATTGGTTCAAAAATTTATTTGATGAAGTTGGTGAATAATAATAGTCCGAATTCCAATGGATGAAAATAAGAGCTAAGATTGATTTATTTTTGTAACCAAAGCAACTTGCCAAATTCACAAGTTGAGAATTAAGAATTTATGGTACTTCTCTTGGACTCTTTTGCCGTTTACCGGAGGCCGTCGAATCATTCTGATTCCGGCTGGTTCTGATAAGCTAGGATGGAGGGACTTTTGGACTATGCTTAGAAATTTTTCGGCAAAAAATGCAGAGAATCAGATGCTGGAAGCGGCAAATCTTAGAAAATCAAAAATCGAAGAAACCATTGAACCGGTTAAAAAAGATGTTAGGTTTAAGAAGGTGTGCAATATTCCTTCTTTTGCAGAAGTAGTTAAGCGAAAAGCAGTTTCATCACTCGATTGTGCGATTATTCAACCCATCTCTGAAGGAAGCAGACTTAAGGCCGTACCCGATGAGAATAGATACCGTGAGTCTCACTCCCCTCGCCGGAATGATCAGAAGATGAGTGATAACAAGAAAAGGGTACCTGAACTTTGGATTCAGAAGGAAACAAAAGTTATTCATGTGGATTGGAACAACTTAATGATTGTTTCTAAGAGTTGTGCTCATGACGATTGGTATAAAGTAGCTTTAGCCTTGAAGGAAAAGTATTCTCAGCCTTGTGTGCTCAATCCGTTTATGGCTGATAAAGCTTTGCTCAAGTTTAGCAATTACAGAGTATTAAATTCAAAAGAGTTAACTGGCAATTGGATTCCAGTGGTGAGTTTCGTATTAAGATTGAAATATGGAATGAGGATCGTCATTGCAGACCCGAATTTATTAGAAGTTATGGGGGTTGGATTAAAATCATTGATCTTCCTTTGTCTCTATGGGATCGGAGATGTTTCGAAGCAATCGGGAAATATTGTGGTGGGTTAGTAGGAATCTCAACAAAGACATTGAACCTTCTGGATGCCTCTGAAGCTTTCATCCAAGTTGCACCGAACAAATGTGGATTCTTACCAGCAGCCGTTAAGATAAGCCATAAGAAGCTTGGTCCAATTACAGTACGTATTTTGGACTGCAATCAATCTAATTTCTCAAAGCCAACCGGTTCATTGAACGATGTTCAGAATTCACCTAATCCTTTGGACTTAGCCAGATTCCAAACGGTTATGGATATTGAAAGGTCCATTACGGATGGCTTTGATATCTATTCCAATATGAAACAGTTTTTTCAGGACCAAGAATTTTTTGAAACGGTTGATCTTCCCAAAGTAGACATTAATGTCGAAACTTTAAAAAGGAAAGAGCAAGAGGCAGTTTCACCTAAATGGTTGGAATTTATTGGTAGGGATTCAAGGGTTTCTAGTATTAATGAACCTCCTGTTTGCAGCCCAAGGAAAATTAAGGGATCATCATTCCCTATTGAAGAAAGGAAGGCAAACGGTCGTGTGGCTTCTCTCCAGTTTTTTTATTCAAGAAAAAGGGGTAAAATGATGGCCAATAAAGATACTAAGGAATTAGCTACGGTTGAGAGTTTTAAATCAAATTTATTGGCAGCTTTTTCAATGAGGAAAGAGATAACACTTCCCTAGATACTATACCGTTTGAGAAACCAGCCATGGTTGAAGGTTTAAAGTCAGATACATGCATGGCATTAATTGAAGAAAGAGTAAGCCCTCCTATTATTACATCGGGTCTATCAGCAACTCTTCATGTCCGTTTGCCTCCCTCTTTATCACAAGGTGTAATCAATTCTAATAAGGATCCAGCCCCTTCGCCTCCTTCTTCTAAGATTTCTATTGGAGAAGATTTTGACTCGGAGTTTAGCGTTAGTAGTCCGGATTATTCTCCGGTTGCCAACTCATTTGAAATTCCAGATGAAGTGTTATGCGAACAATCAATGGAGACAGATTTGCAGAAGTTGTTTCGTGAGTCATCAGAAGGCGAAAAGTCAGAGTTAATCCCTCCATTCTTCGAAAAAGCAGGCATTAATCTGGTTCCAATCTCTGGCTCACAATGAAAGCTATCGCGTGGAAAGGAAGAGGTCTGTGTTAAGATGAAAATGATTGAAGTTCACGAAGCTTTTCCAAAATCAATGTCCAGATTTAGTATTCCTTCAAGAAACAAAGATGGAGCAGGTTGATCCTTCAGCAATCAAATCCTTATGGAGTTTTAAAGATACTGGCTGGTTGTCTATTGATGCACTTGGAAAATCGGGAGTCACCCTATTAATGTGGGCTGAAGGGTGAATCAGTGTGAAAGATGTGATGAAAGGGGGTATTCTTTATTGGTCCTAACCTCTTTTTCTGATTTTGATAATGATCGGCTTTAATCTGTTTATGGTCCAACAGATTATAAGCAAAGGAAATTCTTTCTTTCAAGAACTTCGAGATTTTTCAACACTCTCTAAAGTTGTTGGTGCATAGGTGGAGACTCTAATGTTATTCTGTGGCCTTTCGAAAGATTTTCTTGTTTTCGCTCAGCAATAGCCATGAATAGTCATTTTCCCATCATTCTGGAGGCGGGAGATTTTAAATGGGGCCTTGGTCCCTTCAGATTCTTCAATTCGTGGTTGCAAGATAAGGAGTGCATTGGTATTATTGAGTCTAAGCCTGCGAACGATTACTCTTGGAAGACCTAACGCATTATGGCGCAAAGTGATAGCAAGTTTATATGAGGAGTCTGATTTGGGTTGGTCTTCGGGTATCATGTTGATTGGCTGTCTTAGAGGATCTTGGACCAATATTTCTCGGTAAAGGCAGCAAGACTTGATTCAGGTACATCTTATTTGTTTTGGCTGCACTAATGGGCTGGAGATCGGTCTCCTCCGGATTGCTTCCAAAGTTCTTCAGGCTTTCCCTCCACTCTAGGGTCTGCGGCAGATTCTTGGGCTTCTCATACATTATCTAGGGGAATTTTTTCTTATGCTCTTATGCCTTTATGCAAGTCTGTGCTGGAGTCTTTTGTTAGAAGAATTTAATCTGGTTTGGTTTTTGACCAAAAGATGGCAGATAACTTGTTTCAGCTTCTATCGGGGCCTATTTTGAATCCTAAAGAGTTTATCCCTCGATTAAATGAAGTTAAGGCACTAGTGCATGAGTTGTGGTATGAAAGAAACTTGAGGTTTTTGTTGAAAAGAAGCAGCCTCCTTCAGTACGCTTGGTTCCAGCTAAATTCAAGGCTTCCCTTTGGAGTTCTTTATCTTCTCTATTTAAATCTTTTTCCCCAAGTTTGATTAGTGTGATTATCTTGTTTTGGGTTGCTTTTATTACAATTTTATGAGTTTTGGATTTATTTGTAATTTATGCTTTTTCACTCTTTCGAGAGTTTGTATCTTTGAACAATTTTGTTCTTTTTCATTATTTCAATGAGAAGTTCTTATCTTGTTCACAAAAAAAAAGATTGATTTATTTTTGTTATTTTGATGTATAGGGTTATTTTTAATAAATTTCATAACGCAATTCTTTGATTAAATAGTCAGTTGGAAGTCTATTGGGTGTCTTGAAGTTTGAATCTAATTGAATTTTTAGTTGTAGCTCAAGTCTTGGAGGATTTGTAATTGAGTTATGGCTATCTCCATTTATGCAGAAGAATCAGTGTTCTTGGTGCAAAATAGCAATTATTACTTATAATACAAACCTAAAATCATGCAGATGTTGATGCGTGCACTTTCCAGTCCTCCCTTTGCAAATTATCGTGTTTGGTGGTCTCTTTCAGATTCCAAGTATGCTGGGACTGCATTGTTTATGAAAAAGTGTTTACAACCAAAAAAGGTTTTCTTCAACCTAGACAGAATAGGTATCTTCTCTTCTTGATGTATTGGGGCATTTGATGTTGTGCTATTTCATTATGCATTCTTGTGTTCTTTTATTGAGGTATTGATGCATGCAGTGTCGTGATGTCTTATAATCATCTTATGCTATTTCCTTACCATGAACTTTATCATTAATTAGTACTGTTAATTCTTATATGTTTTTTGTTTAGCAAACTTTTAAATGTTGGAGTAGTTTGTCAGTGCTGAGGTCATCCAATGTGTATCCTCCATGCATTCGGTTACTTCTGGGAACGTTCTTTTTCGAGATTTACTCTTATTATGCCCACATTTGGGTCCCTTCGGGGACATCTGATTATGCACACGTTTGGTCAATATACTATATGGATTCTTGTTTCATTTCCAAATGGACTTGATGCTTTATAGAAATATTTTTTTGTATTCAACAGGTCTACGTGAGAGGAAATTTCAGTTTCCTTCTCCTTCTTCTCCTTCTTTCATTTTTATATCCTTCTATTTTTGCATTATAATTTTATTTTTTTATAAAAATAAACAAGTATCTTGCCAAAAGAAGGAATATAATAGGTATAAATCCAATAACGAAGAAGTTATGAATTCCTTCTCCAAGTAGCACAAATAGAAGTAAGACCATAGTTACAAAAATCTTTATGAAGTGAGGTCAAAGAGTGAAAAAAAATTAAATTATTGTACTCCCAATTCCTCAATGAAGTCCCGTAACCCTATTAATCCATCCGCTTAAAGTTTCTTCTACTCCTTTCTAGCTCCCAGAAGGTAGCCTTGTACTATTAAACAACAGAGGTCTTTTTTTTTTTGTTAAATCTTTATTTAAAATGTGAAACTGCAGATACGTGAAGGAAGCTGACAACTCCATTTCTCAGCTAAATTTTCAAATCTCTCTCTGCTGTAAATCTGCTTACTGTTTAGTATTGCTGAGCCGACTTTAGACCATATAAAATTAGTGTTGATAATCAAGACATGCCTGGTTTCTTGATCTTCATTTTTATGTTAATTAATTATGGGACAAATAAATCGGTCTAGTCATGTTCTGAAGTTCAAGGGATATTTTATCTATTATTTCACATGTCCGTGAGGAAGAGCTATTAAATCATACAGGTGTCCCTGTTTGTAGCTTCAAAGCATGAAGTGGACGGCCGTGTAATTTTAGCTGAATTTGAGACATTTCGTTTATTGAATACATATGCACCAAATAATGGATGGAAAGATGAGGAGAATTCTTTTAAAAGGAGAAGAAAATGGGATAAGAGGATTATGGAGTTTGTTCATCAATCTTCTGATAAGCCTCTTATATGGTGTGGTGACCTGAATGTTAGGTAAGCATTCTTGATTAATTTTTGAAGGTTGGTCCATTCCGTGATCTTTCAATTTCTTTCATTTATATTGTAATCAACGTGGACTATGTTCTATCCACTATTTGAGTGCTTCTAGGTAGGTGCTTGAAGTTTTCGGACACAAAATATTGTTTTGCCTTCATGGATCTAACTCAAGTAACTTTTAAAGTTGGTTAATCATCTTGCATAGTAATTCATATGTAATCATTAAAAATGCCTGTAGATCCGAATTTGTCTTGAAAGGATAGAAAACATCTAAGAACTCATATTATGCAAAAATCTTTAATAATTCTCTTTGCTCCCCGCCCCCCTCTTCCTTTAAGAGAACCTGTTCAAATTAAGACTTCTTTACAAGAGTACACATCTAAGTATTGGTAATAAAAATAAGTAGAATATTTCAAATGAATTGTGTTTAAATTTACTCAATTTGATTTTTGTTGCATTAATTTTATTGTGCAGTCATGAAGAGATTGATGTGAGCCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGCTATATACCCCCAAATAAGGAGGTAGTGAAGCTTGCCGTATAGAGCTCTGGCATATTCATTTCCCCTAGAATTTACATAAATGGTTGTCTTTGTTTCTCTATTAATACCAACGAGGTTTTATTTTTTTATATTTTTTTTATTTTTTTTAAGATTATTATTCGGTTATCTATGTGGACTTGCATTCATTTAGAAGTATTTACGTTTTGAAACTTGGTTGTATTAATATTCATGGGGTTCCATCTCAAAACCAATTGGTTAGGAGAGGAGTAGCCTCTTTTCAATTTGGTATTCTTAACATGCCCCCTCAAGATCGTGGCTCTTTTGGCTCATCGGTCTTGGCCGGATCCTATTTGTTTTGGATCGGATGCTCGTTTGAGCGTTTTGGGCTCTGATACCATATTAATATTCATGGGTTCCATCTCAAAACCAATTGGTTAGGAGAGGAGTAGTCCATGTCTATTATAAACCATTGTTAGGTCCCCTCTCTTTTCAATGTGGGATCCTTAACATGCCCCCTCAAGATCGTGGCTTTTTGGTCATAACATAGAGTATTGAAAAGATAGTCATCCCATCAATTGAAGTCATTGACTGAGGGATAGAATAGAATTTTATGTAAAATTCTGCTTTTTACAGGAAAAGAGGGATTACTTAGTACCATTTCCTTTTATGCCTTTTTTCATGTTTATTTTTGTTTGTGTCCGTCCAATACAGAGTGTGTGTGTGTGTGGGTATTTATTGAGAATGAAGACAAGATCAGGAACAACACCAAAAGTTTCCTCAGATAGCATTCTTTTTCCAATACAGTATTTATTTTTATAGAAAAGAACAGAAAAAAGATCGAGAATTCCTTCTAGTATTTTATTCCCAGAATATAAAATAATCAGACGACTACTCAATTAGTTTCTTTATGGTGCAGGATTGTGGGCAGCCTGGATTTACGTTGGCTGAAAGGAAGCGCTTCGGTGCTATATTGAAAGAGTATGCAATTTTTTGTAGAAATGACCTTCTGTTGATTTTTGCTTGCATGCTCGTAGTGACACTTTAATCTGCTCCTTTTAATTATTTTGTTGCTGGGGGTACAAAGTCCATTTAAAAAGTTAGCTGTTTCAGGTTGTTATAATAAGTCTTCAGTTATCCTTTGCAACTTTCACTTCACCCGACTACATCTCTTCTCTTAATACCTCCTGATTTCTAATAAACACAACTACTGGTTTCATAAAATTCTTATCTAATCCAAAGGGAGAAAAATATGTAGTGGTTTCCCTTGTTATCTTGGTATAAAACTGGTTATCTTTTGCCTTCTGCGTGTATTATGTTCCAGGGGAAAACTGATAGATGCATATAGATTCCTGCACAAGGAGAAAGACATGGAGCGTGGCTTCTCATGGTCTGGACACCCCATTGGAAAGTAAGAAAGATATACATTATTTGATGACTCTAATTTACTACTTATTTAACCTGAATTACTTATCTGCTATTTTACTACTCCCTGTATTCTTTGGCTTACCATGTAGTGATATCTTCATTGTTAAAAGCTGTTAGTTATGTTAACTAAATAATTACTGAGTAGGATCTGCGTCTACAACCTATACAAGTTCAGATTTGGAAATGTTTGTTTTTTTTTAATGAAATAAAGAAACTGTTATATCAAATGATATAAGCATCTATGCCTCCATCCTGTCCCGTTGACACCTCTAATATCATTGAGACGGGCGTCTGTTACATTCTTTTGGAGAGGTTTTCGCAGTATGATGTTCAATCTACTCATACCATTATGGAGGACTCCTAGAGTTTACTTTGGTTAAGAAAACTAAAACCTGTTCCTATCCATGTCTAAATCAGATCCCATCTCCACTGAAACTGAACCGTTATGTCCAGTATTTTTCTTTGAAAGAGTTAGGAAACAGTAGTCCTTCCTTTTTCCAGTCTGGCTGTAGTTATCAAGTTGGAGCAGTATGATGTTCAATCTTCTCATACCATTTTCGTCATGTTTACTTGAAAGGAATGGAAATGAGGAAATAAAATTACCATCCCGTTGTTTACTAGTTTCATCTAAGAATGGAGAATGGTTTCCAATTTTCTGGAATTCACACCAAAAATGGAAATCATGCTCCTCAGCTTGTAAGCTGTTTTCTTCTCACCTCAATAAAGTTTCTGTTTCTTTCTTACCAAGAAAAAATGATTATATATATTTCCAGGTATCGAGGCAAAAGGATGAGAATTGACTATTTTGTAGTTTCCGAGAGTCTTGTAGGTAGGATTGTTTCATGTGAAATGCACGGCCAAGGGATTGAATTAAAAGGTGCACTTCGCTTCTTTTCCATTATTTATGTTTCTTCATATGCATCTTAAGAATTACTCATGCATAGTATAACAGCAAAATTTGGAATCACAAAACAATACCGATGGTTAATTGGTTTGACATAGTCTCTATTCTTATCTAAAGCTGGCTAAAGTGCACTCCATTATTCTCAGAAATCTGACTTATGAAATTTTAACCATACTTCAATTCCCTTCTGGGTTTGGGTTTTGGGCTCATGGGTTCTGTCTTTCGCTAGTCAAGTCTACTTTTGATACAGATTTGCTAATCCTACGAATTGAAACAATAAAATCACACTACTAAATTCACTTCTAACCTACGCTCTACAAATACATAGTTTGCAAAATAAAAAACAAGAAAAATTCAGACTTTTGAAACTCACGACCATCACAGGTTGTCCTAGTAGTCTAAAGGAGTCGAAGTAAATTTTAAAGAATTTGGAGGAAATGTGTTCAAACCACAGTTGTCTGGCCATCCACCTGGGATTTAGTATCCGACAAATTTTTTTGACAACTAAATGTAGTCAGGTTTGACGGTTGTTTCGGAATTTTCTTTTTTTATACAAAGCTTCAAACTAATGAACCAACTAACATCCTCCGCGAAGACTTACAATACGGCTACTATTTTATCTCTTAATATGACTGCGAAAGCGATGTTACTTTGACAGTGATCTTGAATTCATGTAGGTTTTTACGGAAGTGATCATTGCCCTGTTTCTCTTGAGCTGTCAGAAGCTAGTTCCTGTCCTGAGTCTCAAGAAAAC

mRNA sequence

ATGAAACGCTTCTTCAAGCCAATAGAGAAGGAGGGCTCTTCGAAGAAAGCGGCTCTCTCACCTTCGCTGAAAGATGGTGATGATTCTGAAGCATCGGCGCCGGACAAGAAAGAGCCTCTTAAATTTATAACTTGGAATGCCAATAGCTTACTTCTCCGAGTTAAGAACGACTGGCCGGAATTCACCAAGCTCGTCTCTAATCTTGATCCAGATGTCATCGCCATACAAGAAGTAAGGATTCCTGCAGCAGGTTCAAAAGGTGCACCTAAAAACCAAGGAGAGTTGAAAGATGACACAAGCACATCACGTGAAGAGAAGCAGATGTTGATGCGTGCACTTTCCAGTCCTCCCTTTGCAAATTATCGTGTTTGGTGGTCTCTTTCAGATTCCAAGTATGCTGGGACTGCATTGTTTATGAAAAAGTGTTTACAACCAAAAAAGGTTTTCTTCAACCTAGACAGAATAGCTTCAAAGCATGAAGTGGACGGCCGTGTAATTTTAGCTGAATTTGAGACATTTCGTTTATTGAATACATATGCACCAAATAATGGATGGAAAGATGAGGAGAATTCTTTTAAAAGGAGAAGAAAATGGGATAAGAGGATTATGGAGTTTGTTCATCAATCTTCTGATAAGCCTCTTATATGGTGTGGTGACCTGAATGTTAGTCATGAAGAGATTGATGTGAGCCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGCTATATACCCCCAAATAAGGAGGATTGTGGGCAGCCTGGATTTACGTTGGCTGAAAGGAAGCGCTTCGGTGCTATATTGAAAGAGGGAAAACTGATAGATGCATATAGATTCCTGCACAAGGAGAAAGACATGGAGCGTGGCTTCTCATGGTCTGGACACCCCATTGGAAAGTATCGAGGCAAAAGGATGAGAATTGACTATTTTGTAGTTTCCGAGAGTCTTGTAGGTAGGATTGTTTCATGTGAAATGCACGGCCAAGGGATTGAATTAAAAGGTTTTTACGGAAGTGATCATTGCCCTGTTTCTCTTGAGCTGTCAGAAGCTAGTTCCTGTCCTGAGTCTCAAGAAAAC

Coding sequence (CDS)

ATGAAACGCTTCTTCAAGCCAATAGAGAAGGAGGGCTCTTCGAAGAAAGCGGCTCTCTCACCTTCGCTGAAAGATGGTGATGATTCTGAAGCATCGGCGCCGGACAAGAAAGAGCCTCTTAAATTTATAACTTGGAATGCCAATAGCTTACTTCTCCGAGTTAAGAACGACTGGCCGGAATTCACCAAGCTCGTCTCTAATCTTGATCCAGATGTCATCGCCATACAAGAAGTAAGGATTCCTGCAGCAGGTTCAAAAGGTGCACCTAAAAACCAAGGAGAGTTGAAAGATGACACAAGCACATCACGTGAAGAGAAGCAGATGTTGATGCGTGCACTTTCCAGTCCTCCCTTTGCAAATTATCGTGTTTGGTGGTCTCTTTCAGATTCCAAGTATGCTGGGACTGCATTGTTTATGAAAAAGTGTTTACAACCAAAAAAGGTTTTCTTCAACCTAGACAGAATAGCTTCAAAGCATGAAGTGGACGGCCGTGTAATTTTAGCTGAATTTGAGACATTTCGTTTATTGAATACATATGCACCAAATAATGGATGGAAAGATGAGGAGAATTCTTTTAAAAGGAGAAGAAAATGGGATAAGAGGATTATGGAGTTTGTTCATCAATCTTCTGATAAGCCTCTTATATGGTGTGGTGACCTGAATGTTAGTCATGAAGAGATTGATGTGAGCCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGCTATATACCCCCAAATAAGGAGGATTGTGGGCAGCCTGGATTTACGTTGGCTGAAAGGAAGCGCTTCGGTGCTATATTGAAAGAGGGAAAACTGATAGATGCATATAGATTCCTGCACAAGGAGAAAGACATGGAGCGTGGCTTCTCATGGTCTGGACACCCCATTGGAAAGTATCGAGGCAAAAGGATGAGAATTGACTATTTTGTAGTTTCCGAGAGTCTTGTAGGTAGGATTGTTTCATGTGAAATGCACGGCCAAGGGATTGAATTAAAAGGTTTTTACGGAAGTGATCATTGCCCTGTTTCTCTTGAGCTGTCAGAAGCTAGTTCCTGTCCTGAGTCTCAAGAAAAC

Protein sequence

MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN

Homology

[Close]

BLAST of MS019971 vs. NCBI nr
Match: XP_022137368.1 (DNA-(apurinic or apyrimidinic site) lyase [Momordica charantia])

HSP 1 Score: 736.5 bits (1900), Expect = 1.1e-208
Identity = 356/359 (99.16%), Postives = 357/359 (99.44%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEAS PDKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALFMK+CLQPKKVFFNLDRIA KHEVDGRVILAEFETFRLLNTYA
Sbjct: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL
Sbjct: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN
Sbjct: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 359

[Close]

BLAST of MS019971 vs. NCBI nr
Match: XP_004152506.1 (DNA-(apurinic or apyrimidinic site) lyase [Cucumis sativus] >XP_011651906.1 DNA-(apurinic or apyrimidinic site) lyase [Cucumis sativus])

HSP 1 Score: 698.0 bits (1800), Expect = 4.3e-197
Identity = 337/361 (93.35%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGD--DSEASAPDKKEPLKFITWNANSLLLRVKNDW 60
           MKRFFKPIEKEGSSKK ALSPSLKDGD  DSEAS PDKKEPLKF+TWNANSLLLRVKNDW
Sbjct: 1   MKRFFKPIEKEGSSKKVALSPSLKDGDDGDSEASVPDKKEPLKFVTWNANSLLLRVKNDW 60

Query: 61  PEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPF 120
            EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+TSREEKQMLMRALSSPPF
Sbjct: 61  SEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSPPF 120

Query: 121 ANYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT 180
           ANYRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT
Sbjct: 121 ANYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT 180

Query: 181 YAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240
           Y+PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA
Sbjct: 181 YSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240

Query: 241 KLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIG 300
           KLNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDA+RFLHKEKDMERGFSWSGHPIG
Sbjct: 241 KLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHPIG 300

Query: 301 KYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQE 360
           KYRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+
Sbjct: 301 KYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQK 360

[Close]

BLAST of MS019971 vs. NCBI nr
Match: XP_008439197.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo] >XP_008439208.1 PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo] >XP_008439217.1 PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo])

HSP 1 Score: 697.6 bits (1799), Expect = 5.7e-197
Identity = 336/360 (93.33%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDG-DDSEASAPDKKEPLKFITWNANSLLLRVKNDWP 60
           MKRFFKPIEKEGSSKK ALSPSLKD  DDSE SAPDKKEPLKF+TWNANSLLLRVKNDWP
Sbjct: 1   MKRFFKPIEKEGSSKKPALSPSLKDNDDDSELSAPDKKEPLKFVTWNANSLLLRVKNDWP 60

Query: 61  EFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFA 120
           EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+ SREEKQMLMRALSSPPFA
Sbjct: 61  EFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNISREEKQMLMRALSSPPFA 120

Query: 121 NYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY 180
           NYRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY
Sbjct: 121 NYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY 180

Query: 181 APNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240
           +PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK
Sbjct: 181 SPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240

Query: 241 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 300
           LNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDAYR+LHKEKDMERGFSWSGHPIGK
Sbjct: 241 LNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAYRYLHKEKDMERGFSWSGHPIGK 300

Query: 301 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           YRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+N
Sbjct: 301 YRGKRMRIDYFIVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQKN 360

[Close]

BLAST of MS019971 vs. NCBI nr
Match: XP_038893653.1 (DNA-(apurinic or apyrimidinic site) endonuclease [Benincasa hispida] >XP_038893654.1 DNA-(apurinic or apyrimidinic site) endonuclease [Benincasa hispida])

HSP 1 Score: 695.3 bits (1793), Expect = 2.8e-196
Identity = 334/359 (93.04%), Postives = 346/359 (96.38%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALS SLKD DDSEASAPDKKEPLKF+TWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSASLKDDDDSEASAPDKKEPLKFVTWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+NLDPDVIAIQEVRIPAAGSK A KNQGELKDDTSTSREEKQ+LMRALSSPPFAN
Sbjct: 61  FTKFVTNLDPDVIAIQEVRIPAAGSKSASKNQGELKDDTSTSREEKQILMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+KKC QPKKV FNLDRIASKHEVDGRVILAEFETFRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVSFNLDRIASKHEVDGRVILAEFETFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFNAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+VSESL+GRI SCEMHGQGIEL+ FYGSDHCPVSLELSEASSCP  Q+N
Sbjct: 301 RGKRMRIDYFLVSESLIGRIASCEMHGQGIELQDFYGSDHCPVSLELSEASSCPSPQKN 359

[Close]

BLAST of MS019971 vs. NCBI nr
Match: XP_023519158.1 (DNA-(apurinic or apyrimidinic site) lyase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 694.1 bits (1790), Expect = 6.3e-196
Identity = 332/359 (92.48%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAAL+PSLKDGDDSEAS  DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALTPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPD+IAIQEVRIPAAGSKGA KNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDIIAIQEVRIPAAGSKGASKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEAFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDMERGFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMERGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESL  RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEASSCPESQ++
Sbjct: 301 RGKRMRIDYFLASESLADRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASSCPESQKS 359

[Close]

BLAST of MS019971 vs. ExPASy Swiss-Prot
Match: Q5XF07 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Arabidopsis thaliana OX=3702 GN=APE1L PE=1 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 5.6e-163
Identity = 271/362 (74.86%), Postives = 316/362 (87.29%), Query Frame = 0


Query: 1   MKRFFKPIEKEGS--SKKAALSPSLKDGD-DSEASAPDKKEPLKFITWNANSLLLRVKND 60
           MKRFFKPIEKE S  +KK  LSP  +DGD D      ++ EP KF+TWNANS LLRVKND
Sbjct: 1   MKRFFKPIEKENSPAAKKPCLSPEKRDGDGDGVEEEKNQNEPSKFMTWNANSFLLRVKND 60

Query: 61  WPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPP 120
           W +F+K VS+ DPDVIAIQEVR+PAAG KG PKN  EL DDT   REEKQ+L RALSSPP
Sbjct: 61  WSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTKVLREEKQILTRALSSPP 120

Query: 121 FANYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLN 180
           F NY VWWSL+DSKYAGTAL +KKC +P+KV+FNLD++ASKHE DGRVILAEFETFRLLN
Sbjct: 121 FGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHEPDGRVILAEFETFRLLN 180

Query: 181 TYAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSA 240
           TY+PNNGWKDEEN+F+RRRKWDKRI+EF++++SDKPLIWCGDLNVSHEEIDVSHP+FF+ 
Sbjct: 181 TYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTSDKPLIWCGDLNVSHEEIDVSHPEFFAT 240

Query: 241 AKLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPI 300
           AKLNGY+PPNKEDCGQPGFT +ER RFGA +KEG+L+DAYR+LHKE++ME GFSWSG+PI
Sbjct: 241 AKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPI 300

Query: 301 GKYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ 360
           GKYRGKRMRIDYF+VSE L  RIVSC+MHG+GIEL+GF+GSDHCPV+LELS+ SS  E +
Sbjct: 301 GKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFHGSDHCPVTLELSKPSS--EME 360

[Close]

BLAST of MS019971 vs. ExPASy Swiss-Prot
Match: P43138 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30
Identity = 102/348 (29.31%), Postives = 163/348 (46.84%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKN---DWPEFT 65
           K  EKE + +   L    +D  D + SA  K   LK  +WN + L   +K    DW    
Sbjct: 30  KKTEKEAAGEGPVL---YEDPPDQKTSASGKSATLKICSWNVDGLRAWIKKKGLDW---- 89

Query: 66  KLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANYR 125
             V    PD++ +QE +                          +  L   L   P   ++
Sbjct: 90  --VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLTHQ 149

Query: 126 VWWSLSDSK-YAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYAP 185
            W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEFE+F L+  Y P
Sbjct: 150 YWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFESFILVTAYVP 209

Query: 186 NNGWKDEENSFKRRRKWDKRIMEFVHQ-SSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 245
           N G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P        
Sbjct: 210 NAGRGLVRLEY--RQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNP-------- 269

Query: 246 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 305
                 NK++    GFT  ER+ FG +L+   L D++R L+        F W+     + 
Sbjct: 270 ----KGNKKNA---GFTPQERQGFGEMLQAVPLADSFRHLYPNTAYAYTF-WTYMMNARS 316

Query: 306 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
           +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 330 KNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 316

[Close]

BLAST of MS019971 vs. ExPASy Swiss-Prot
Match: P28352 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-30
Identity = 101/348 (29.02%), Postives = 162/348 (46.55%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKN---DWPEFT 65
           K  EKE + +   L    +D  D + S   K   LK  +WN + L   +K    DW    
Sbjct: 30  KKTEKEAAGEGPVL---YEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDW---- 89

Query: 66  KLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANYR 125
             V    PD++ +QE +                          +  L   L   P   ++
Sbjct: 90  --VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLTHQ 149

Query: 126 VWWSLSDSK-YAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYAP 185
            W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEFE+F L+  Y P
Sbjct: 150 YWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFESFVLVTAYVP 209

Query: 186 NNGWKDEENSFKRRRKWDKRIMEFVHQ-SSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 245
           N G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P        
Sbjct: 210 NAGRGLVRLEY--RQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNP-------- 269

Query: 246 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 305
                 NK++    GFT  ER+ FG +L+   L D++R L+        F W+     + 
Sbjct: 270 ----KGNKKNA---GFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTF-WTYMMNARS 316

Query: 306 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
           +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 330 KNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 316

[Close]

BLAST of MS019971 vs. ExPASy Swiss-Prot
Match: A1YFZ3 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan paniscus OX=9597 GN=APEX1 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.5e-30
Identity = 100/349 (28.65%), Postives = 164/349 (46.99%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSL-KDGDDSEASAPDKKEPLKFITWNANSLLLRVKN---DWPEF 65
           K   K+   + A   P+L +D  D + S   K   LK  +WN + L   +K    DW   
Sbjct: 27  KTAAKKNDKEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDW--- 86

Query: 66  TKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANY 125
              V    PD++ +QE +                          +  L   L   P  ++
Sbjct: 87  ---VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLSH 146

Query: 126 RVWWSLSDSK-YAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 185
           + W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEF++F L+  Y 
Sbjct: 147 QYWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFDSFVLVTAYV 206

Query: 186 PNNGWKDEENSFKRRRKWDKRIMEFVH-QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 245
           PN G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P       
Sbjct: 207 PNAGRGLVRLEY--RQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNP------- 266

Query: 246 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 305
                  NK++    GFT  ER+ FG +L+   L D++R L+        F W+     +
Sbjct: 267 -----KGNKKNA---GFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTF-WTYMMNAR 317

Query: 306 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
            +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 327 SKNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 317

[Close]

BLAST of MS019971 vs. ExPASy Swiss-Prot
Match: A2T6Y4 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan troglodytes OX=9598 GN=APEX1 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.5e-30
Identity = 100/349 (28.65%), Postives = 164/349 (46.99%), Query Frame = 0


Query: 6   KPIEKEGSSKKAALSPSL-KDGDDSEASAPDKKEPLKFITWNANSLLLRVKN---DWPEF 65
           K   K+   + A   P+L +D  D + S   K   LK  +WN + L   +K    DW   
Sbjct: 27  KTAAKKNDKEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDW--- 86

Query: 66  TKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFANY 125
              V    PD++ +QE +                          +  L   L   P  ++
Sbjct: 87  ---VKEEAPDILCLQETKC------------------------SENKLPAELQELPGLSH 146

Query: 126 RVWWSLSDSK-YAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 185
           + W + SD + Y+G  L  ++C  P KV + +     +H+ +GRVI+AEF++F L+  Y 
Sbjct: 147 QYWSAPSDKEGYSGVGLLSRQC--PLKVSYGIGE--EEHDQEGRVIVAEFDSFVLVTAYV 206

Query: 186 PNNGWKDEENSFKRRRKWDKRIMEFVH-QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 245
           PN G       +  R++WD+   +F+   +S KPL+ CGDLNV+HEEID+ +P       
Sbjct: 207 PNAGRGLVRLEY--RQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNP------- 266

Query: 246 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 305
                  NK++    GFT  ER+ FG +L+   L D++R L+        F W+     +
Sbjct: 267 -----KGNKKNA---GFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTF-WTYMMNAR 317

Query: 306 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELS 349
            +    R+DYF++S SL+  +   ++  + +      GSDHCP++L L+
Sbjct: 327 SKNVGWRLDYFLLSHSLLPALCDSKIRSKAL------GSDHCPITLYLA 317

[Close]

BLAST of MS019971 vs. ExPASy TrEMBL
Match: A0A6J1CA58 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 GN=LOC111008839 PE=3 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.3e-209
Identity = 356/359 (99.16%), Postives = 357/359 (99.44%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEAS PDKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVPDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALFMK+CLQPKKVFFNLDRIA KHEVDGRVILAEFETFRLLNTYA
Sbjct: 121 YRVWWSLSDSKYAGTALFMKRCLQPKKVFFNLDRIALKHEVDGRVILAEFETFRLLNTYA 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL
Sbjct: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN
Sbjct: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 359

[Close]

BLAST of MS019971 vs. ExPASy TrEMBL
Match: A0A0A0LR25 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=Csa_1G050040 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.1e-197
Identity = 337/361 (93.35%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGD--DSEASAPDKKEPLKFITWNANSLLLRVKNDW 60
           MKRFFKPIEKEGSSKK ALSPSLKDGD  DSEAS PDKKEPLKF+TWNANSLLLRVKNDW
Sbjct: 1   MKRFFKPIEKEGSSKKVALSPSLKDGDDGDSEASVPDKKEPLKFVTWNANSLLLRVKNDW 60

Query: 61  PEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPF 120
            EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+TSREEKQMLMRALSSPPF
Sbjct: 61  SEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSPPF 120

Query: 121 ANYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT 180
           ANYRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT
Sbjct: 121 ANYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNT 180

Query: 181 YAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240
           Y+PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA
Sbjct: 181 YSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAA 240

Query: 241 KLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIG 300
           KLNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDA+RFLHKEKDMERGFSWSGHPIG
Sbjct: 241 KLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHPIG 300

Query: 301 KYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQE 360
           KYRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+
Sbjct: 301 KYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQK 360

[Close]

BLAST of MS019971 vs. ExPASy TrEMBL
Match: A0A1S3AY74 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103484065 PE=3 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 2.7e-197
Identity = 336/360 (93.33%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDG-DDSEASAPDKKEPLKFITWNANSLLLRVKNDWP 60
           MKRFFKPIEKEGSSKK ALSPSLKD  DDSE SAPDKKEPLKF+TWNANSLLLRVKNDWP
Sbjct: 1   MKRFFKPIEKEGSSKKPALSPSLKDNDDDSELSAPDKKEPLKFVTWNANSLLLRVKNDWP 60

Query: 61  EFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFA 120
           EFTK V+NLDPD IAIQEVRIPAAGSKGA KNQGELKDDT+ SREEKQMLMRALSSPPFA
Sbjct: 61  EFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNISREEKQMLMRALSSPPFA 120

Query: 121 NYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY 180
           NYRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY
Sbjct: 121 NYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTY 180

Query: 181 APNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240
           +PNNGWK+EE SFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK
Sbjct: 181 SPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 240

Query: 241 LNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGK 300
           LNGYIPPNKEDCGQPGFTLAER RF AILKEGKLIDAYR+LHKEKDMERGFSWSGHPIGK
Sbjct: 241 LNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAYRYLHKEKDMERGFSWSGHPIGK 300

Query: 301 YRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           YRGKRMRIDYF+VSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ+N
Sbjct: 301 YRGKRMRIDYFIVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQKN 360

[Close]

BLAST of MS019971 vs. ExPASy TrEMBL
Match: A0A6J1E7C5 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 GN=LOC111431300 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.0e-196
Identity = 333/359 (92.76%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEAS  DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPD+IAIQEVRIPAAGSKGA KNQGELKDDTSTSREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDIIAIQEVRIPAAGSKGASKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEEFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKEDCGQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDMERGFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDCGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMERGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESLV RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEAS CPESQ++
Sbjct: 301 RGKRMRIDYFLASESLVDRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASFCPESQKS 359

[Close]

BLAST of MS019971 vs. ExPASy TrEMBL
Match: A0A6J1KMJ1 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita maxima OX=3661 GN=LOC111495528 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.4e-193
Identity = 330/359 (91.92%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASAPDKKEPLKFITWNANSLLLRVKNDWPE 60
           MKRFFKPIEKEGSSKKAALSPSLKDGDDSEAS  DKKEPLKFITWNANSLLLRVKNDWPE
Sbjct: 1   MKRFFKPIEKEGSSKKAALSPSLKDGDDSEASVSDKKEPLKFITWNANSLLLRVKNDWPE 60

Query: 61  FTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPPFAN 120
           FTK V+N DPDVIAIQEVRIPAAGSKG  KNQGELKDDTS SREEKQMLMRALSSPPFAN
Sbjct: 61  FTKFVTNFDPDVIAIQEVRIPAAGSKGVSKNQGELKDDTSASREEKQMLMRALSSPPFAN 120

Query: 121 YRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYA 180
           YRVWWSLSDSKYAGTALF+KKC QPKKVFFNLDRIASKHEVDGRVILAEFE FRLLNTY+
Sbjct: 121 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFEEFRLLNTYS 180

Query: 181 PNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAKL 240
           PNNGWK+EENSFKRRRKWDKR++EFV QSSDKPLIWCGDLNVSHE+IDVSHP+FFSAAKL
Sbjct: 181 PNNGWKEEENSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKL 240

Query: 241 NGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPIGKY 300
           NGYIPPNKED GQPGFTLAERKRF AILKEGKLIDAYRFLHKEKDME GFSWSG+PIGKY
Sbjct: 241 NGYIPPNKEDYGQPGFTLAERKRFSAILKEGKLIDAYRFLHKEKDMECGFSWSGNPIGKY 300

Query: 301 RGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQEN 360
           RGKRMRIDYF+ SESL  RIVSCEMHGQGIEL+GFYGSDHCPVSLELSEASSCPESQ++
Sbjct: 301 RGKRMRIDYFLASESLADRIVSCEMHGQGIELQGFYGSDHCPVSLELSEASSCPESQKS 359

[Close]

BLAST of MS019971 vs. TAIR 10
Match: AT3G48425.1 (DNAse I-like superfamily protein )

HSP 1 Score: 575.1 bits (1481), Expect = 4.0e-164
Identity = 271/362 (74.86%), Postives = 316/362 (87.29%), Query Frame = 0


Query: 1   MKRFFKPIEKEGS--SKKAALSPSLKDGD-DSEASAPDKKEPLKFITWNANSLLLRVKND 60
           MKRFFKPIEKE S  +KK  LSP  +DGD D      ++ EP KF+TWNANS LLRVKND
Sbjct: 1   MKRFFKPIEKENSPAAKKPCLSPEKRDGDGDGVEEEKNQNEPSKFMTWNANSFLLRVKND 60

Query: 61  WPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQGELKDDTSTSREEKQMLMRALSSPP 120
           W +F+K VS+ DPDVIAIQEVR+PAAG KG PKN  EL DDT   REEKQ+L RALSSPP
Sbjct: 61  WSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTKVLREEKQILTRALSSPP 120

Query: 121 FANYRVWWSLSDSKYAGTALFMKKCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLN 180
           F NY VWWSL+DSKYAGTAL +KKC +P+KV+FNLD++ASKHE DGRVILAEFETFRLLN
Sbjct: 121 FGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHEPDGRVILAEFETFRLLN 180

Query: 181 TYAPNNGWKDEENSFKRRRKWDKRIMEFVHQSSDKPLIWCGDLNVSHEEIDVSHPDFFSA 240
           TY+PNNGWKDEEN+F+RRRKWDKRI+EF++++SDKPLIWCGDLNVSHEEIDVSHP+FF+ 
Sbjct: 181 TYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTSDKPLIWCGDLNVSHEEIDVSHPEFFAT 240

Query: 241 AKLNGYIPPNKEDCGQPGFTLAERKRFGAILKEGKLIDAYRFLHKEKDMERGFSWSGHPI 300
           AKLNGY+PPNKEDCGQPGFT +ER RFGA +KEG+L+DAYR+LHKE++ME GFSWSG+PI
Sbjct: 241 AKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPI 300

Query: 301 GKYRGKRMRIDYFVVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLELSEASSCPESQ 360
           GKYRGKRMRIDYF+VSE L  RIVSC+MHG+GIEL+GF+GSDHCPV+LELS+ SS  E +
Sbjct: 301 GKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFHGSDHCPVTLELSKPSS--EME 360

[Close]

BLAST of MS019971 vs. TAIR 10
Match: AT2G41460.1 (apurinic endonuclease-redox protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-28
Identity = 95/318 (29.87%), Postives = 155/318 (48.74%), Query Frame = 0


Query: 34  PDKKEPLKFITWNANSLLLRVKNDWPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQG 93
           P+  + +K +TWN N L   +K +     +L    + D++ +QE ++             
Sbjct: 270 PEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKL------------- 329

Query: 94  ELKDDTSTSREEKQMLMRALSSPPFANYRVWWSLSDSK--YAGTALFMKKCLQPKKVFFN 153
           ++KD      E K+ L+             +WS S SK  Y+GTA+  +  ++P  V + 
Sbjct: 330 QVKD----VEEIKKTLIDGYD-------HSFWSCSVSKLGYSGTAIISR--IKPLSVRYG 389

Query: 154 LDRIASKHEVDGRVILAEFETFRLLNTYAPNNGWKDEENSFKRRRKWDKRIMEFVHQ-SS 213
                S H+ +GR++ AEF++F L+NTY PN+G   +  S+ R  +WD+ +   + +   
Sbjct: 390 TG--LSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSY-RIEEWDRTLSNHIKELEK 449

Query: 214 DKPLIWCGDLNVSHEEIDVSHPDFFSAAKLNGYIPPNKEDCGQPGFTLAERKRFGAILKE 273
            KP++  GDLN +HEEID+ +P              NK      GFT+ ER+ FGA L +
Sbjct: 450 SKPVVLTGDLNCAHEEIDIFNP------------AGNKRSA---GFTIEERQSFGANLLD 509

Query: 274 GKLIDAYRFLHKEKDMERGFS-WSGHPIGKYRGKRMRIDYFVVSESLVGRIVSCEMHGQG 333
              +D +R   K+     G++ W     G+   K  R+DYF+VS+S     ++  +H   
Sbjct: 510 KGFVDTFR---KQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS-----IAANVHDSY 534

Query: 334 IELKGFYGSDHCPVSLEL 348
           I L    GSDHCP+ L L
Sbjct: 570 I-LPDINGSDHCPIGLIL 534

[Close]

BLAST of MS019971 vs. TAIR 10
Match: AT3G60950.1 (C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase )

HSP 1 Score: 62.8 bits (151), Expect = 6.6e-10
Identity = 33/99 (33.33%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 141 KCLQPKKVFFNLDRIASKHEVDGRVILAEFETFRLLNTYAPN--NGWKD----EENSFKR 200
           K ++P +V +      S H+++GR++ AEF++F L++TY PN  +G K     + N+ + 
Sbjct: 500 KNIKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIE- 559

Query: 201 RRKWDKRIMEFVHQ-SSDKPLIWCGDLNVSHEEIDVSHP 233
              WD+ +   +      KP++  GDLN +HEEID+ +P
Sbjct: 560 --DWDRTLSNHIKDLEKSKPVVLTGDLNCAHEEIDIFNP 595

[Close]

BLAST of MS019971 vs. TAIR 10
Match: AT2G41460.2 (apurinic endonuclease-redox protein )

HSP 1 Score: 58.9 bits (141), Expect = 9.5e-09
Identity = 43/153 (28.10%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 34  PDKKEPLKFITWNANSLLLRVKNDWPEFTKLVSNLDPDVIAIQEVRIPAAGSKGAPKNQG 93
           P+  + +K +TWN N L   +K +     +L    + D++ +QE ++             
Sbjct: 270 PEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKL------------- 329

Query: 94  ELKDDTSTSREEKQMLMRALSSPPFANYRVWWSLSDSK--YAGTALFMKKCLQPKKVFFN 153
           ++KD      E K+ L+             +WS S SK  Y+GTA+  +  ++P  V + 
Sbjct: 330 QVKD----VEEIKKTLIDGYD-------HSFWSCSVSKLGYSGTAIISR--IKPLSVRYG 389

Query: 154 LDRIASKHEVDGRVILAEFETFRLLNTYAPNNG 185
                S H+ +GR++ AEF++F L+NTY PN+G
Sbjct: 390 TG--LSGHDTEGRIVTAEFDSFYLINTYVPNSG 394

The following BLAST results are available for this feature:

BLAST of MS019971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137368.1	1.1e-208	99.16	DNA-(apurinic or apyrimidinic site) lyase [Momordica charantia]	[more]
XP_004152506.1	4.3e-197	93.35	DNA-(apurinic or apyrimidinic site) lyase [Cucumis sativus] >XP_011651906.1 DNA-...	[more]
XP_008439197.1	5.7e-197	93.33	PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo] >XP_00843920...	[more]
XP_038893653.1	2.8e-196	93.04	DNA-(apurinic or apyrimidinic site) endonuclease [Benincasa hispida] >XP_0388936...	[more]
XP_023519158.1	6.3e-196	92.48	DNA-(apurinic or apyrimidinic site) lyase [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS019971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF07	5.6e-163	74.86	DNA-(apurinic or apyrimidinic site) endonuclease OS=Arabidopsis thaliana OX=3702...	[more]
P43138	1.5e-30	29.31	DNA-(apurinic or apyrimidinic site) endonuclease OS=Rattus norvegicus OX=10116 G...	[more]
P28352	4.3e-30	29.02	DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Ape...	[more]
A1YFZ3	9.5e-30	28.65	DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan paniscus OX=9597 GN=APEX...	[more]
A2T6Y4	9.5e-30	28.65	DNA-(apurinic or apyrimidinic site) endonuclease OS=Pan troglodytes OX=9598 GN=A...	[more]

BLAST of MS019971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CA58	5.3e-209	99.16	DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LR25	2.1e-197	93.35	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S3AY74	2.7e-197	93.33	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1E7C5	3.0e-196	92.76	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KMJ1	2.4e-193	91.92	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of MS019971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48425.1	4.0e-164	74.86	DNAse I-like superfamily protein	[more]
AT2G41460.1	1.8e-28	29.87	apurinic endonuclease-redox protein	[more]
AT3G60950.1	6.6e-10	33.33	C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase	[more]
AT2G41460.2	9.5e-09	28.10	apurinic endonuclease-redox protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 44..340 e-value: 1.3E-9 score: 38.1
IPR004808	AP endonuclease 1	TIGRFAM	TIGR00633	TIGR00633	coord: 40..347 e-value: 4.6E-46 score: 155.3
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 30..351
IPR004808	AP endonuclease 1	PROSITE	PS51435	AP_NUCLEASE_F1_4	coord: 40..349 score: 41.221409
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 6..349 e-value: 4.1E-71 score: 242.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 40..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR22748:SF10	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE	coord: 30..351
None	No IPR available	CDD	cd09087	Ape1-like_AP-endo	coord: 40..347 e-value: 3.46307E-101 score: 297.156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019971.1	MS019971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004518	nuclease activity