MS019968 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGTTGCAGCAGGACAGGGGTCGTCCACTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCGGAAGGATTTACAGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACCACTGGAACTGCTGCCAGCACGGTTTCACCTCAGAGAAATGAGTCTATCTATAACAATGAAACTTTCCCTCAATATCATCCACCGAAGGTCTGTTTAATAGAAGGCGTGAGAATAAATTTGTTATGAACATCTTCAAGTCTAATCTTTTCTTGGTATTTGGATGCAGAAGAGGTGGTTTTGCTGTGGT TTGTTGCAGCAGGACAGGGGTCGTCCACTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCGGAAGGATTTACAGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACCACTGGAACTGCTGCCAGCACGGTTTCACCTCAGAGAAATGAGTCTATCTATAACAATGAAACTTTCCCTCAATATCATCCACCGAAGAAGAGGTGGTTTTGCTGTGGT TTGTTGCAGCAGGACAGGGGTCGTCCACTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCGGAAGGATTTACAGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACCACTGGAACTGCTGCCAGCACGGTTTCACCTCAGAGAAATGAGTCTATCTATAACAATGAAACTTTCCCTCAATATCATCCACCGAAGAAGAGGTGGTTTTGCTGTGGT LLQQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAASTVSPQRNESIYNNETFPQYHPPKKRWFCCG Homology
BLAST of MS019968 vs. NCBI nr
Match: XP_022137179.1 (uncharacterized protein LOC111008714 isoform X1 [Momordica charantia]) HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of MS019968 vs. NCBI nr
Match: XP_022137180.1 (uncharacterized protein LOC111008714 isoform X2 [Momordica charantia]) HSP 1 Score: 160.6 bits (405), Expect = 5.3e-36 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS019968 vs. NCBI nr
Match: XP_008439256.1 (PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 138.7 bits (348), Expect = 2.1e-29 Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of MS019968 vs. NCBI nr
Match: XP_008439265.1 (PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo]) HSP 1 Score: 136.7 bits (343), Expect = 8.2e-29 Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of MS019968 vs. NCBI nr
Match: XP_022954832.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_023542808.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo] >KAG6573102.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012289.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28 Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of MS019968 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 6.3e-16 Identity = 42/71 (59.15%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of MS019968 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of MS019968 vs. ExPASy TrEMBL
Match: A0A6J1C6I4 (uncharacterized protein LOC111008714 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008714 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 6.7e-37 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of MS019968 vs. ExPASy TrEMBL
Match: A0A6J1C5Z3 (uncharacterized protein LOC111008714 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008714 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS019968 vs. ExPASy TrEMBL
Match: A0A1S3AZ04 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.0e-29 Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of MS019968 vs. ExPASy TrEMBL
Match: A0A1S3AYE6 (RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.0e-29 Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of MS019968 vs. ExPASy TrEMBL
Match: A0A6J1GRZ4 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111456977 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 6.7e-29 Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of MS019968 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 89.7 bits (221), Expect = 1.1e-18 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of MS019968 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 86.7 bits (213), Expect = 9.0e-18 Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of MS019968 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 84.7 bits (208), Expect = 3.4e-17 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of MS019968 vs. TAIR 10
Match: AT3G48450.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.9e-16 Identity = 46/83 (55.42%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of MS019968 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.1e-15 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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