Homology
BLAST of MS019938 vs. NCBI nr
Match:
XP_022137407.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Momordica charantia])
HSP 1 Score: 945.7 bits (2443), Expect = 1.6e-271
Identity = 468/472 (99.15%), Postives = 469/472 (99.36%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR
Sbjct: 17 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 76
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK
Sbjct: 77 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 136
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH
Sbjct: 137 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 196
Query: 181 NSSLTGLLAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFS 240
SSLTGLLAMS CTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFS
Sbjct: 197 KSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFS 256
Query: 241 GSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWD 300
GSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWD
Sbjct: 257 GSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWD 316
Query: 301 ISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSSTI 360
ISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQP NLL+STI
Sbjct: 317 ISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNSTI 376
Query: 361 PLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQ 420
PLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQ
Sbjct: 377 PLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQ 436
Query: 421 VMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
VMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH
Sbjct: 437 VMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 488
BLAST of MS019938 vs. NCBI nr
Match:
XP_038894085.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Benincasa hispida])
HSP 1 Score: 783.5 bits (2022), Expect = 1.0e-222
Identity = 389/473 (82.24%), Postives = 423/473 (89.43%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MG GE+ LA+CSD+NMGSGITIWDV+TG TLLHIPTCASPPYGLICLRNEFLVASQTR
Sbjct: 1 MGYDGEKMVLAMCSDRNMGSGITIWDVKTGQTLLHIPTCASPPYGLICLRNEFLVASQTR 60
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGGSIFIWSLNKPQPP+ SY LEPIGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGSIFIWSLNKPQPPIMSYTLEPIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLK+WSG RKPIKC+LFSWDDSFLITGSADGMICVWSMI LLDVE +SQPILYCLMEH
Sbjct: 121 LLKIWSGQRKPIKCVLFSWDDSFLITGSADGMICVWSMIGLLDVELVGNSQPILYCLMEH 180
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
NSSLTGLL MSGC+ SIIISSSL+GSLKFWDL+SGMI G+QAHTEGITAIVLHPTEQLLF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLNGSLKFWDLMSGMIRGTQAHTEGITAIVLHPTEQLLF 240
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+ DG+IFAS+L FG+DNCI +K+NQLLAPKGHKGAITALAFS+MDLIS SEDCT+C W
Sbjct: 241 SGTADGRIFASRLAFGLDNCITIKENQLLAPKGHKGAITALAFSQMDLISASEDCTICKW 300
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNL+A+P SLIS SNRKR LN FS+SSLDKYPQP NLL ST
Sbjct: 301 DISGQRIIQKLDHKKGRITNLLAVPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLLKST 360
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLFP L PL EN NSI F+S SLNQQI D KTEGTSAAIQMKVETSLE ++WAS++TK
Sbjct: 361 IPLFPSLQPLRENLNSIGFTSTGSLNQQILDTKTEGTSAAIQMKVETSLERRVWASKMTK 420
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSRLLDMMRIRLF K++S +KK K +RDRVA REK+P SFH
Sbjct: 421 QVMDMNNHLQSRLLDMMRIRLFGPTKISSSSKKRKDERDRVARTREKRPLSFH 473
BLAST of MS019938 vs. NCBI nr
Match:
KAA0055324.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 778.9 bits (2010), Expect = 2.5e-221
Identity = 385/473 (81.40%), Postives = 420/473 (88.79%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 1 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 60
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 180
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 181 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 240
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 241 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 300
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 301 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 360
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 361 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 420
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK+PSSFH
Sbjct: 421 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKRPSSFH 473
BLAST of MS019938 vs. NCBI nr
Match:
XP_016899511.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo])
HSP 1 Score: 777.7 bits (2007), Expect = 5.7e-221
Identity = 385/473 (81.40%), Postives = 419/473 (88.58%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 18 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 77
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 78 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 137
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 138 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 197
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 198 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 257
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 258 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 317
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 318 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 377
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 378 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 437
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK PSSFH
Sbjct: 438 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 490
BLAST of MS019938 vs. NCBI nr
Match:
XP_016899510.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo])
HSP 1 Score: 777.7 bits (2007), Expect = 5.7e-221
Identity = 385/473 (81.40%), Postives = 419/473 (88.58%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 91 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 150
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 151 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 210
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 211 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 270
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 271 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 330
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 331 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 390
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 391 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 450
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 451 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 510
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK PSSFH
Sbjct: 511 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563
BLAST of MS019938 vs. ExPASy Swiss-Prot
Match:
Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 5.2e-60
Identity = 154/444 (34.68%), Postives = 238/444 (53.60%), Query Frame = 0
Query: 10 LAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGS 69
+ V + ++ GI WD++TG L CASP +GL + +FL +SQ + GS
Sbjct: 3 ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--SGS 62
Query: 70 IFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHR 129
IF WS KPQ ++SYP+EPI LA+ +G YL GG +SG+I+LWEV +GKLLK W GH
Sbjct: 63 IFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHY 122
Query: 130 KPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILY--CLMEHNSSLTGL 189
+ + C++FS DDS L++GS DG I VWS+I L D + +R LY EH S+T +
Sbjct: 123 RSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVTDI 182
Query: 190 -LAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQ 249
+ GC ++IISSS D + K W L G ++ + I A+ L P + ++G+ D
Sbjct: 183 VIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD-- 242
Query: 250 IFASKLEFGVDNCIAMKDNQLLAPKGHKG-AITALAFSRMD--LISTSEDCTVCIWDISS 309
SK+ G N + Q+L KG AIT LA+ LIS SED VC+WD S
Sbjct: 243 ---SKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKS 302
Query: 310 QRIIQKLDHKKGR---ITNLVAIPWPSLISMSNRK----RALNHFSVSSLDKYPQP-GNL 369
R ++ L H KG N + I ++++ SN+ ++ L+KY +P +
Sbjct: 303 LRHVRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPVEDT 362
Query: 370 LSSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVE-TSLESQMWA 429
+ + + PP P + F S D +++Q+ +++ +G SAA +M++E LE
Sbjct: 363 MDGIVTVDPP--PFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEMERLKLE----- 422
Query: 430 SRITKQVMEMNNHLQSRLLDMMRI 439
K+ ++MN Q +++++
Sbjct: 423 ---YKRSLQMNEQWQKNYENLLQV 427
BLAST of MS019938 vs. ExPASy Swiss-Prot
Match:
A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 6.9e-36
Identity = 102/328 (31.10%), Postives = 170/328 (51.83%), Query Frame = 0
Query: 23 TIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGSIFIWSL-NKPQPP 82
T+W+ TG LL + GL L ++L+ G +G I +W L + Q
Sbjct: 21 TVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLG------GQLGKNYINVWELQRRDQLQ 80
Query: 83 LRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDD 142
+ P+ L+++ +G+YL G ++ +I+LWEV +G LL + + H + + C+ F+ D
Sbjct: 81 QKIVCPGPVNCLSASPNGLYLVAG-IAESIYLWEVSTGHLLAILNSHYQDVTCLTFTDDS 140
Query: 143 SFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTGL-LAMSGCTSIIISS 202
S +I+G+ D ++ VW + +L VE R +P Y H+ +T + + G + + +S
Sbjct: 141 SHIISGAKDSLVLVWGLYSVLQVETSRGPEP-RYVWSRHSLPITDVQCGIGGPQARVATS 200
Query: 203 SLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNC- 262
SLD ++K WD+ SG ++ S IT++ P E LF G DG I+ L +
Sbjct: 201 SLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFCGGSDGVIYQVDLYTTPEQRE 260
Query: 263 IAMKDNQLLAPKGHKGAITALAFSRMD---LISTSEDCTVCIWDISSQRIIQKLDHKKGR 322
Q + KGH+ +T L+ S +D LIS S D TVC+WDI S++ ++ + H +G
Sbjct: 261 RPFHPEQEMVFKGHRNQVTCLSVS-LDGSMLISGSHDETVCVWDIQSKQSLRSVPH-RGP 320
Query: 323 ITNLVAIPWPSLISMSNRKRA--LNHFS 343
+TN+ I PS + + K + L HFS
Sbjct: 321 VTNVFIIAAPSNMLRAESKPSFPLPHFS 338
BLAST of MS019938 vs. ExPASy Swiss-Prot
Match:
Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 1.5e-30
Identity = 99/343 (28.86%), Postives = 164/343 (47.81%), Query Frame = 0
Query: 10 LAVCSDKNMGS-GITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGG 69
+AVC+D +W++ +G LL + P GL L E+L+A+Q +G
Sbjct: 7 VAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LGKN 66
Query: 70 SIFIWSL-NKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSG 129
I W L K Q + P+ L ++ +G+Y+ G +S NI+LWEV +G LL + S
Sbjct: 67 YICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAG-ISENIYLWEVSTGNLLVILSR 126
Query: 130 HRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTGL 189
H + + C+ F+ D S I+G D ++ WS+ +L + R+ P + H +T L
Sbjct: 127 HYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAP-RHVWSRHTLPITDL 186
Query: 190 -LAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQ 249
G + + ++SLD ++K W++ SG ++ S GI A+ + E +F G DG
Sbjct: 187 HCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGS 246
Query: 250 IFASKL---EFGVDNCIAMKDNQLLAPKGHKGAITALAFSR--MDLISTSEDCTVCIWDI 309
IF L + + +GH+ +T L+ S L+S S D TV +WD+
Sbjct: 247 IFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDV 306
Query: 310 SSQRIIQKLDHKKGRITN--LVAIPWPSLISMSNRKRALNHFS 343
SQ+ ++ + KG +TN ++ P L S L HF+
Sbjct: 307 QSQQCLRTVT-LKGPVTNACIMLAPVSMLSSDFRPGLPLPHFN 340
BLAST of MS019938 vs. ExPASy Swiss-Prot
Match:
Q68EI0 (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 2.5e-30
Identity = 90/324 (27.78%), Postives = 163/324 (50.31%), Query Frame = 0
Query: 24 IWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLR 83
++D TG L + L L E+++ +Q +G I +W + + + L+
Sbjct: 22 VYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQ------LGKNYINVWEIQR-KDQLQ 81
Query: 84 SYPLEP--IGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDD 143
+ P + L ++ DG+Y+ G ++ I+LWEV +G LL + S H + + CI F+ D
Sbjct: 82 QKIVCPGIVTCLCASPDGLYVLAG-IAEAIYLWEVSTGNLLAILSRHFQDLSCIKFTDDS 141
Query: 144 SFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTGL-LAMSGCTSIIISS 203
S ++G D + +W++ ++ ++ R+ +P + L H+ +T + + G + + ++
Sbjct: 142 SHFVSGGKDNLAFIWNLSSVVQLDSSRTPEP-RHILSRHSLPITDIHCGLMGPQARVATA 201
Query: 204 SLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQIFASKL---EFGVD 263
SLD ++K W++ SG ++ S GI ++ P E LF G DG IF L D
Sbjct: 202 SLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIFQVSLCSTSLSRD 261
Query: 264 NCIAMKDNQLLAPKGHKGAITALAFSRMD---LISTSEDCTVCIWDISSQRIIQKLDHKK 323
KGH+ +T L+ S MD L+S S D TV +WD+ S++ I ++H +
Sbjct: 262 KTFQSDSEGNQVFKGHRNLVTCLSVS-MDGTVLLSGSNDETVRMWDVQSKQCIWTINH-R 321
Query: 324 GRITNLVAIPWPSLISMSNRKRAL 339
G +TN IP P+ + +S+ A+
Sbjct: 322 GPVTNAAIIPAPANMFLSDSHPAV 334
BLAST of MS019938 vs. ExPASy Swiss-Prot
Match:
Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)
HSP 1 Score: 131.7 bits (330), Expect = 2.1e-29
Identity = 103/344 (29.94%), Postives = 169/344 (49.13%), Query Frame = 0
Query: 10 LAVCSDK--NMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGG 69
+AVC+D M S I +W++ +G LL + P GL L E+L+A+Q +G
Sbjct: 7 VAVCTDSAAPMWSCI-VWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LGK 66
Query: 70 GSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWS 129
I W L K Q + P+ L ++ +G+Y+ G ++ +IHLWEV +G LL + S
Sbjct: 67 NYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAG-VAESIHLWEVSTGNLLVILS 126
Query: 130 GHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTG 189
H + + C+ F+ D S I+G D ++ VWS+ +L + R P + H +T
Sbjct: 127 RHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAP-RHVWSHHALPITD 186
Query: 190 L-LAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDG 249
L G + + +SSLD ++K W++ SG ++ S I A+ + E +F G +G
Sbjct: 187 LHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEG 246
Query: 250 QIFASKL---EFGVDNCIAMKDNQLLAPKGHKGAITALAFSR--MDLISTSEDCTVCIWD 309
IF L + + + KGH+ +T L+ S L+S S D TV +WD
Sbjct: 247 SIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWD 306
Query: 310 ISSQRIIQKLDHKKGRITNLVAIPWP-SLISMSNR-KRALNHFS 343
+ S++ I+ + KG +TN + P S++S R L HF+
Sbjct: 307 VQSKQCIRTV-ALKGPVTNAAILLAPVSMLSSDFRPSLPLPHFN 340
BLAST of MS019938 vs. ExPASy TrEMBL
Match:
A0A6J1C861 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008865 PE=4 SV=1)
HSP 1 Score: 945.7 bits (2443), Expect = 7.6e-272
Identity = 468/472 (99.15%), Postives = 469/472 (99.36%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR
Sbjct: 17 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 76
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK
Sbjct: 77 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 136
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH
Sbjct: 137 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 196
Query: 181 NSSLTGLLAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFS 240
SSLTGLLAMS CTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFS
Sbjct: 197 KSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFS 256
Query: 241 GSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWD 300
GSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWD
Sbjct: 257 GSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWD 316
Query: 301 ISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSSTI 360
ISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQP NLL+STI
Sbjct: 317 ISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNSTI 376
Query: 361 PLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQ 420
PLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQ
Sbjct: 377 PLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQ 436
Query: 421 VMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
VMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH
Sbjct: 437 VMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 488
BLAST of MS019938 vs. ExPASy TrEMBL
Match:
A0A5A7UJJ9 (Protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001670 PE=4 SV=1)
HSP 1 Score: 778.9 bits (2010), Expect = 1.2e-221
Identity = 385/473 (81.40%), Postives = 420/473 (88.79%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 1 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 60
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 180
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 181 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 240
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 241 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 300
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 301 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 360
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 361 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 420
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK+PSSFH
Sbjct: 421 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKRPSSFH 473
BLAST of MS019938 vs. ExPASy TrEMBL
Match:
A0A5D3BJZ3 (Protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004600 PE=4 SV=1)
HSP 1 Score: 777.7 bits (2007), Expect = 2.7e-221
Identity = 385/473 (81.40%), Postives = 419/473 (88.58%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 1 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 60
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 180
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 181 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 240
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 241 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 300
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 301 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 360
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 361 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 420
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK PSSFH
Sbjct: 421 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 473
BLAST of MS019938 vs. ExPASy TrEMBL
Match:
A0A1S4DUX3 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)
HSP 1 Score: 777.7 bits (2007), Expect = 2.7e-221
Identity = 385/473 (81.40%), Postives = 419/473 (88.58%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 91 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 150
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 151 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 210
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 211 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 270
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 271 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 330
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 331 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 390
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 391 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 450
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 451 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 510
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK PSSFH
Sbjct: 511 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563
BLAST of MS019938 vs. ExPASy TrEMBL
Match:
A0A1S4DU43 (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)
HSP 1 Score: 777.7 bits (2007), Expect = 2.7e-221
Identity = 385/473 (81.40%), Postives = 419/473 (88.58%), Query Frame = 0
Query: 1 MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 60
MGNGGE ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 18 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 77
Query: 61 KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 120
KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG SGNIHLWEVGSGK
Sbjct: 78 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 137
Query: 121 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 180
LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE +SQP++YCLM+H
Sbjct: 138 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 197
Query: 181 NSSLTGLLAMSGCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 240
SSLTGLL MSGC+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 198 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 257
Query: 241 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 300
SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 258 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 317
Query: 301 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPGNLLSST 360
DIS QRIIQKLDHKKGRITNLVAIP SLIS SNRKR LN FS+SSLDKYPQP NL+ ST
Sbjct: 318 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 377
Query: 361 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 420
IPLF L PL+EN NSI F+S SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 378 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 437
Query: 421 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 473
QVM+MNNHLQSR+LDMMRIRLF+ K+NS +KK K +RDRVA EK PSSFH
Sbjct: 438 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 490
BLAST of MS019938 vs. TAIR 10
Match:
AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 233.4 bits (594), Expect = 3.7e-61
Identity = 154/444 (34.68%), Postives = 238/444 (53.60%), Query Frame = 0
Query: 10 LAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGS 69
+ V + ++ GI WD++TG L CASP +GL + +FL +SQ + GS
Sbjct: 3 ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--SGS 62
Query: 70 IFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHR 129
IF WS KPQ ++SYP+EPI LA+ +G YL GG +SG+I+LWEV +GKLLK W GH
Sbjct: 63 IFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHY 122
Query: 130 KPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILY--CLMEHNSSLTGL 189
+ + C++FS DDS L++GS DG I VWS+I L D + +R LY EH S+T +
Sbjct: 123 RSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVTDI 182
Query: 190 -LAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQ 249
+ GC ++IISSS D + K W L G ++ + I A+ L P + ++G+ D
Sbjct: 183 VIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD-- 242
Query: 250 IFASKLEFGVDNCIAMKDNQLLAPKGHKG-AITALAFSRMD--LISTSEDCTVCIWDISS 309
SK+ G N + Q+L KG AIT LA+ LIS SED VC+WD S
Sbjct: 243 ---SKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKS 302
Query: 310 QRIIQKLDHKKGR---ITNLVAIPWPSLISMSNRK----RALNHFSVSSLDKYPQP-GNL 369
R ++ L H KG N + I ++++ SN+ ++ L+KY +P +
Sbjct: 303 LRHVRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPVEDT 362
Query: 370 LSSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVE-TSLESQMWA 429
+ + + PP P + F S D +++Q+ +++ +G SAA +M++E LE
Sbjct: 363 MDGIVTVDPP--PFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEMERLKLE----- 422
Query: 430 SRITKQVMEMNNHLQSRLLDMMRI 439
K+ ++MN Q +++++
Sbjct: 423 ---YKRSLQMNEQWQKNYENLLQV 427
BLAST of MS019938 vs. TAIR 10
Match:
AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 72.0 bits (175), Expect = 1.4e-12
Identity = 56/248 (22.58%), Postives = 112/248 (45.16%), Query Frame = 0
Query: 90 IGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSA 149
I +A + D ++ + + LW+V +G L+K GH C+ F+ + +++GS
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 150 DGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTGLLAMSGCTSIIISSSLDGSLKFW 209
D + +W + ++ L L H+ +T + + S+I+SSS DG + W
Sbjct: 134 DETVRIWDV----------TTGKCLKVLPAHSDPVTA-VDFNRDGSLIVSSSYDGLCRIW 193
Query: 210 DLISGMIMGSQAHTEG--ITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQL 269
D +G + + E ++ + P + + G++D + + L
Sbjct: 194 DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS---------SAKFL 253
Query: 270 LAPKGHKGA--ITALAFSRMD---LISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVA 329
GH A + AFS + ++S SED V +W+++S++++QKL+ + N+
Sbjct: 254 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 301
Query: 330 IPWPSLIS 331
P +LI+
Sbjct: 314 HPTENLIA 301
BLAST of MS019938 vs. TAIR 10
Match:
AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 71.6 bits (174), Expect = 1.9e-12
Identity = 48/177 (27.12%), Postives = 81/177 (45.76%), Query Frame = 0
Query: 72 IWSLNKPQPPLR-SYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRK 131
+WS+ K P+ P+ +A + V + GA SG I LW++ K+++ ++GHR
Sbjct: 42 LWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRS 101
Query: 132 PIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTGL--L 191
+ F FL +GS+D + VW D + C+ + G+ +
Sbjct: 102 NCSAVEFHPFGEFLASGSSDTNLRVW------DTRKKG-------CIQTYKGHTRGISTI 161
Query: 192 AMSGCTSIIISSSLDGSLKFWDLISGMIMGS-QAHTEGITAIVLHPTEQLLFSGSVD 245
S ++S LD +K WDL +G ++ + H I ++ HP E LL +GS D
Sbjct: 162 EFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSAD 205
BLAST of MS019938 vs. TAIR 10
Match:
AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 70.1 bits (170), Expect = 5.4e-12
Identity = 73/330 (22.12%), Postives = 130/330 (39.39%), Query Frame = 0
Query: 52 EFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNI 111
E+ + +G G SL P L +P + + G +A G+ I
Sbjct: 19 EWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHP-SAVYTMKFNPAGTLIASGSHDREI 78
Query: 112 HLWEV-GSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSS 171
LW V G K + GH+ I + ++ D S +++ S D + W DVE +
Sbjct: 79 FLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAW------DVETGKQI 138
Query: 172 QPILYCLMEHNSSLTGLLAMSGCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIV 231
+ + EH+S + +IIS S DG+ K WD+ + + ITA+
Sbjct: 139 KK----MAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS 198
Query: 232 LHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFS--RMDLI 291
+F+G VD + L K + +GH+ IT ++ S L+
Sbjct: 199 FSDAADKIFTGGVDNDVKVWDLR---------KGEATMTLEGHQDTITGMSLSPDGSYLL 258
Query: 292 STSEDCTVCIWDI----SSQRIIQKLD-HKKGRITNLVAIPWP---SLISMSNRKRALNH 351
+ D +C+WD+ R ++ + H+ NL+ W + ++ + R ++
Sbjct: 259 TNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHI 318
Query: 352 FSVSSLDK-YPQPGNLLSSTIPLFPPLHPL 370
+ +S Y PG+ S +F P P+
Sbjct: 319 WDTTSRRTIYKLPGHTGSVNECVFHPTEPI 328
BLAST of MS019938 vs. TAIR 10
Match:
AT5G25150.1 (TBP-associated factor 5 )
HSP 1 Score: 66.2 bits (160), Expect = 7.8e-11
Identity = 42/143 (29.37%), Postives = 74/143 (51.75%), Query Frame = 0
Query: 72 IWSLNKPQP-PLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRK 131
IWS+++ QP + + L + + + Y+A G+ + LW+V +G+ ++++ GHR
Sbjct: 486 IWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 545
Query: 132 PIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHNSSLTGLLAM 191
+ + S D ++ +G DG I +W D+ R P LM HNS + L+
Sbjct: 546 MVLSLAMSPDGRYMASGDEDGTIMMW------DLSTARCITP----LMGHNSCVWS-LSY 605
Query: 192 SGCTSIIISSSLDGSLKFWDLIS 214
SG S++ S S D ++K WD+ S
Sbjct: 606 SGEGSLLASGSADCTVKLWDVTS 617
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022137407.1 | 1.6e-271 | 99.15 | protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Momordica charantia] | [more] |
| XP_038894085.1 | 1.0e-222 | 82.24 | protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Benincasa hispida] | [more] |
| KAA0055324.1 | 2.5e-221 | 81.40 | protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo var. makuwa] | [more] |
| XP_016899511.1 | 5.7e-221 | 81.40 | PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo] | [more] |
| XP_016899510.1 | 5.7e-221 | 81.40 | PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9M3B4 | 5.2e-60 | 34.68 | Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1... | [more] |
| A0A1L8HX76 | 6.9e-36 | 31.10 | WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1 | [more] |
| Q3SZD4 | 1.5e-30 | 28.86 | WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1 | [more] |
| Q68EI0 | 2.5e-30 | 27.78 | WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1 | [more] |
| Q9BV38 | 2.1e-29 | 29.94 | WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C861 | 7.6e-272 | 99.15 | protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Momordica charantia OX=36... | [more] |
| A0A5A7UJJ9 | 1.2e-221 | 81.40 | Protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo var. makuwa ... | [more] |
| A0A5D3BJZ3 | 2.7e-221 | 81.40 | Protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo var. makuwa ... | [more] |
| A0A1S4DUX3 | 2.7e-221 | 81.40 | protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=L... | [more] |
| A0A1S4DU43 | 2.7e-221 | 81.40 | protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=L... | [more] |
