Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTTTGGTTCCCATTTTTGAGTTCTCAACTAAGATAAAACCATACAAAATGGGTGTTAATATTATCAACAACAATATCATTCGTAGCTTCCTCCTCAGTTTTCTTACAGCTCTGGTTTCTGGGATCTTCTTTTTCATCTCCTTCTGGATTCTTCCATTTCTGCAGTCTTCTTCTTCCACTCCCACGGCCTCCGTTTTCCTCCTCGGAAACCTAATCGTCGCCGTCCTCGTCGGAGAATCCAAAATGTTTTCCCCAAAAACTTGCGATTCTGCAGTCGATGATGATGATGACTGTTTATTCGATGGGAGTTTTGGGGAGTGTTCGATCGGAGAAATGGAAGATGATTGTGATGAGGGTGAAAGGATTGATGAGTGGGAAATGAGTAATTTGGGTGATCGTGAGGAATTGAGTAGAAGGGCTGATGATTTTATTGCCAGAGTCAATATGCAGAGGAAGATTGAAGCTACGATACTTTCATATGGTTGCGAATGGACGACGATGAACAAAAAATATAGAAGAAGAAGAATC
mRNA sequence
TTTTCTTTGGTTCCCATTTTTGAGTTCTCAACTAAGATAAAACCATACAAAATGGGTGTTAATATTATCAACAACAATATCATTCGTAGCTTCCTCCTCAGTTTTCTTACAGCTCTGGTTTCTGGGATCTTCTTTTTCATCTCCTTCTGGATTCTTCCATTTCTGCAGTCTTCTTCTTCCACTCCCACGGCCTCCGTTTTCCTCCTCGGAAACCTAATCGTCGCCGTCCTCGTCGGAGAATCCAAAATGTTTTCCCCAAAAACTTGCGATTCTGCAGTCGATGATGATGATGACTGTTTATTCGATGGGAGTTTTGGGGAGTGTTCGATCGGAGAAATGGAAGATGATTGTGATGAGGGTGAAAGGATTGATGAGTGGGAAATGAGTAATTTGGGTGATCGTGAGGAATTGAGTAGAAGGGCTGATGATTTTATTGCCAGAGTCAATATGCAGAGGAAGATTGAAGCTACGATACTTTCATATGGTTGCGAATGGACGACGATGAACAAAAAATATAGAAGAAGAAGAATC
Coding sequence (CDS)
TTTTCTTTGGTTCCCATTTTTGAGTTCTCAACTAAGATAAAACCATACAAAATGGGTGTTAATATTATCAACAACAATATCATTCGTAGCTTCCTCCTCAGTTTTCTTACAGCTCTGGTTTCTGGGATCTTCTTTTTCATCTCCTTCTGGATTCTTCCATTTCTGCAGTCTTCTTCTTCCACTCCCACGGCCTCCGTTTTCCTCCTCGGAAACCTAATCGTCGCCGTCCTCGTCGGAGAATCCAAAATGTTTTCCCCAAAAACTTGCGATTCTGCAGTCGATGATGATGATGACTGTTTATTCGATGGGAGTTTTGGGGAGTGTTCGATCGGAGAAATGGAAGATGATTGTGATGAGGGTGAAAGGATTGATGAGTGGGAAATGAGTAATTTGGGTGATCGTGAGGAATTGAGTAGAAGGGCTGATGATTTTATTGCCAGAGTCAATATGCAGAGGAAGATTGAAGCTACGATACTTTCATATGGTTGCGAATGGACGACGATGAACAAAAAATATAGAAGAAGAAGAATC
Protein sequence
FSLVPIFEFSTKIKPYKMGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
Homology
BLAST of MS019913 vs. NCBI nr
Match:
XP_022137313.1 (uncharacterized protein LOC111008810 [Momordica charantia])
HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0
Query: 18 MGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVL 77
MGVNIINNNII SFLLSFLTALVSGIFFFISFWILPFLQSSS+TPTASVFLLGNLIVAVL
Sbjct: 1 MGVNIINNNIIHSFLLSFLTALVSGIFFFISFWILPFLQSSSNTPTASVFLLGNLIVAVL 60
Query: 78 VGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREEL 137
VGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREEL
Sbjct: 61 VGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREEL 120
Query: 138 SRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI 178
SRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
Sbjct: 121 SRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI 160
BLAST of MS019913 vs. NCBI nr
Match:
XP_008446247.1 (PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo] >KAA0055346.1 Protoheme IX farnesyltransferase [Cucumis melo var. makuwa] >TYJ99272.1 Protoheme IX farnesyltransferase [Cucumis melo var. makuwa])
HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20
Identity = 79/175 (45.14%), Postives = 103/175 (58.86%), Query Frame = 0
Query: 23 INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TP 82
+NN II LLSFLTAL S + WI+P L SSS TP
Sbjct: 21 VNNIIINILLLSFLTALFSTL-----LWIIPLLLPSSSLLSLFLSSLSHSFNYPINFPTP 80
Query: 83 TASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSI--GEMEDDCDEG 142
T VF+LGNLIV +L+GESK+FS T D D C + GSF E S+ G+ + +
Sbjct: 81 T-FVFILGNLIVVLLIGESKIFSSTTPDPF--GFDICFYGGSFLETSVSEGDQKRASESF 140
Query: 143 ERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR 176
+ DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+ T K+YR++
Sbjct: 141 DEEDEWEIESV-NSEELSKRADDFIARVNMQRKIEAMMVVYCCDMMTTKKRYRKK 186
BLAST of MS019913 vs. NCBI nr
Match:
XP_011660360.1 (uncharacterized protein LOC105436383 [Cucumis sativus])
HSP 1 Score: 101.7 bits (252), Expect = 6.8e-18
Identity = 78/167 (46.71%), Postives = 100/167 (59.88%), Query Frame = 0
Query: 23 INNNIIRSFLL-SFLTALVSGIFFFISFWILPFLQSSS-----------STPTASVFLLG 82
+NN II LL FLTAL+ WILP SSS TPT VF+LG
Sbjct: 19 VNNIIINILLLCCFLTALL---------WILP---SSSLFHPSNYPINFPTPT-FVFILG 78
Query: 83 NLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGE--CSIGEMEDDCDEGERIDEWEM 142
NLIV +L+GESK+FS T D D C +DGSF E S G+ + + + DEWE+
Sbjct: 79 NLIVVLLIGESKVFSSTTPDPF--GFDICFYDGSFRETLVSEGDHKRTSESFDEEDEWEI 138
Query: 143 SNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR 176
++ + EELS+RADDFIARVNMQRKIEA ++ Y C+ TM K+Y ++
Sbjct: 139 ESV-NSEELSKRADDFIARVNMQRKIEAMMVMYCCDMMTMKKRYTKK 169
BLAST of MS019913 vs. NCBI nr
Match:
KAG6573141.1 (hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 97.8 bits (242), Expect = 9.8e-17
Identity = 75/173 (43.35%), Postives = 102/173 (58.96%), Query Frame = 0
Query: 10 STKIKPYKMGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPT-ASVFL 69
S+KI NI + + + +L FL AL FFI LP S + PT SVF+
Sbjct: 5 SSKIPLTMALTNIKTRSSMITNILCFLVAL-----FFILLLFLPLSNYSINFPTPISVFI 64
Query: 70 LGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERI----D 129
+GNLIV VL+GESK+F+ K+ D D+ C +DG+ + D + G +I D
Sbjct: 65 IGNLIVVVLIGESKVFASKSSDFFA--DNLCFYDGTL------IVGGDENRGLKICHDDD 124
Query: 130 EWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI 178
EWEM L + E+LS+RADDFIARVNMQR+IEA+IL + CE T KYR++ +
Sbjct: 125 EWEM-GLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKAL 163
BLAST of MS019913 vs. NCBI nr
Match:
KAG7012326.1 (hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 96.7 bits (239), Expect = 2.2e-16
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 0
Query: 21 NIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPT-ASVFLLGNLIVAVLVG 80
NI + + + +L FL AL FFI LP S + PT SVF++GNLIV VL+G
Sbjct: 5 NIKTRSSMITNILCFLVAL-----FFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIG 64
Query: 81 ESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERI----DEWEMSNLGDRE 140
ESK+F+ K+ D D+ C +DG+ + D + G +I DEWEM L + E
Sbjct: 65 ESKVFASKSSDFFA--DNLCFYDGTL------IVGGDENRGLKICHDDDEWEM-GLENCE 124
Query: 141 ELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI 178
+LS+RADDFIARVNMQR+IEA+IL + CE T KYR++ +
Sbjct: 125 DLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKAL 152
BLAST of MS019913 vs. ExPASy TrEMBL
Match:
A0A6J1CA01 (uncharacterized protein LOC111008810 OS=Momordica charantia OX=3673 GN=LOC111008810 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0
Query: 18 MGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVL 77
MGVNIINNNII SFLLSFLTALVSGIFFFISFWILPFLQSSS+TPTASVFLLGNLIVAVL
Sbjct: 1 MGVNIINNNIIHSFLLSFLTALVSGIFFFISFWILPFLQSSSNTPTASVFLLGNLIVAVL 60
Query: 78 VGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREEL 137
VGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREEL
Sbjct: 61 VGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDEGERIDEWEMSNLGDREEL 120
Query: 138 SRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI 178
SRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
Sbjct: 121 SRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI 160
BLAST of MS019913 vs. ExPASy TrEMBL
Match:
A0A5A7UM42 (Protoheme IX farnesyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004840 PE=4 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 9.2e-21
Identity = 79/175 (45.14%), Postives = 103/175 (58.86%), Query Frame = 0
Query: 23 INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TP 82
+NN II LLSFLTAL S + WI+P L SSS TP
Sbjct: 21 VNNIIINILLLSFLTALFSTL-----LWIIPLLLPSSSLLSLFLSSLSHSFNYPINFPTP 80
Query: 83 TASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSI--GEMEDDCDEG 142
T VF+LGNLIV +L+GESK+FS T D D C + GSF E S+ G+ + +
Sbjct: 81 T-FVFILGNLIVVLLIGESKIFSSTTPDPF--GFDICFYGGSFLETSVSEGDQKRASESF 140
Query: 143 ERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR 176
+ DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+ T K+YR++
Sbjct: 141 DEEDEWEIESV-NSEELSKRADDFIARVNMQRKIEAMMVVYCCDMMTTKKRYRKK 186
BLAST of MS019913 vs. ExPASy TrEMBL
Match:
A0A1S3BFF3 (uncharacterized protein LOC103489033 OS=Cucumis melo OX=3656 GN=LOC103489033 PE=4 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 9.2e-21
Identity = 79/175 (45.14%), Postives = 103/175 (58.86%), Query Frame = 0
Query: 23 INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TP 82
+NN II LLSFLTAL S + WI+P L SSS TP
Sbjct: 21 VNNIIINILLLSFLTALFSTL-----LWIIPLLLPSSSLLSLFLSSLSHSFNYPINFPTP 80
Query: 83 TASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSI--GEMEDDCDEG 142
T VF+LGNLIV +L+GESK+FS T D D C + GSF E S+ G+ + +
Sbjct: 81 T-FVFILGNLIVVLLIGESKIFSSTTPDPF--GFDICFYGGSFLETSVSEGDQKRASESF 140
Query: 143 ERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR 176
+ DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+ T K+YR++
Sbjct: 141 DEEDEWEIESV-NSEELSKRADDFIARVNMQRKIEAMMVVYCCDMMTTKKRYRKK 186
BLAST of MS019913 vs. ExPASy TrEMBL
Match:
A0A0A0LWQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051640 PE=4 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 3.3e-18
Identity = 78/167 (46.71%), Postives = 100/167 (59.88%), Query Frame = 0
Query: 23 INNNIIRSFLL-SFLTALVSGIFFFISFWILPFLQSSS-----------STPTASVFLLG 82
+NN II LL FLTAL+ WILP SSS TPT VF+LG
Sbjct: 19 VNNIIINILLLCCFLTALL---------WILP---SSSLFHPSNYPINFPTPT-FVFILG 78
Query: 83 NLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGE--CSIGEMEDDCDEGERIDEWEM 142
NLIV +L+GESK+FS T D D C +DGSF E S G+ + + + DEWE+
Sbjct: 79 NLIVVLLIGESKVFSSTTPDPF--GFDICFYDGSFRETLVSEGDHKRTSESFDEEDEWEI 138
Query: 143 SNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR 176
++ + EELS+RADDFIARVNMQRKIEA ++ Y C+ TM K+Y ++
Sbjct: 139 ESV-NSEELSKRADDFIARVNMQRKIEAMMVMYCCDMMTMKKRYTKK 169
BLAST of MS019913 vs. ExPASy TrEMBL
Match:
A0A540KLX5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_039234 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 5.4e-05
Identity = 60/183 (32.79%), Postives = 82/183 (44.81%), Query Frame = 0
Query: 28 IRSFLLSFLTALVSGIFFFISFWILPFLQSSS-----STPTAS--------VFLLGNLIV 87
+ +F L FLTAL +F F S W+ P S+ S P S VF+LGNLIV
Sbjct: 23 LSNFFLYFLTALTCSLFCFSSLWLPPVSSSTKVFVFVSVPKISSVFLSSKFVFILGNLIV 82
Query: 88 AVLVGESKMFSPKTCDSAVDD--------------------DDDCLFDGSFGE------- 147
LVG+ K+FS TC S + D +D+ L E
Sbjct: 83 VALVGQCKIFSTWTCPSNIGDQYESMKRVQSHHSSSVHQEREDNTLNTRLVEERVVQKRI 142
Query: 148 CS--------------IGEMEDDCDEGERIDEWEMSNLGDREE-LSRRADDFIARVNMQR 156
CS +G E+ + E +DE + NL D ++ L++RADDFIARVN +R
Sbjct: 143 CSPCGDLLEAVEEKGLVGGSEEVVEVKEDMDEDDELNLPDEDQKLNQRADDFIARVNERR 202
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022137313.1 | 1.3e-80 | 98.75 | uncharacterized protein LOC111008810 [Momordica charantia] | [more] |
XP_008446247.1 | 1.9e-20 | 45.14 | PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo] >KAA0055346.1 Pro... | [more] |
XP_011660360.1 | 6.8e-18 | 46.71 | uncharacterized protein LOC105436383 [Cucumis sativus] | [more] |
KAG6573141.1 | 9.8e-17 | 43.35 | hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7012326.1 | 2.2e-16 | 44.44 | hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CA01 | 6.1e-81 | 98.75 | uncharacterized protein LOC111008810 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A5A7UM42 | 9.2e-21 | 45.14 | Protoheme IX farnesyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A1S3BFF3 | 9.2e-21 | 45.14 | uncharacterized protein LOC103489033 OS=Cucumis melo OX=3656 GN=LOC103489033 PE=... | [more] |
A0A0A0LWQ9 | 3.3e-18 | 46.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051640 PE=4 SV=1 | [more] |
A0A540KLX5 | 5.4e-05 | 32.79 | Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_039234 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |