MS019758 (gene) Bitter gourd (TR) v1

Overview
NameMS019758
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger, C2H2-like protein
Locationscaffold729: 1995316 .. 1996041 (-)
RNA-Seq ExpressionMS019758
SyntenyMS019758
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACTAAGCAGAGACATGATTTTGATTTCGATGATTCTTCTGCAACCAAAACCAAAAGCAGTTTTGAATATAATGAGTCGTGGGAAGAGCAAGCTTTTGCAGAAGATGCCGCCGCCGCTGGCCGCCTTGGGGGCTGCGTTTGGCCGCCGAGATCTTATTCTTGCAGTTTCTGTAGAAGAGAATTCCGGTCAGCTCAAGCCCTGGGAGGCCATATGAATGTCCATAGGAGAGATAGGGCTAGATTAAAACAATCCCCAAACCCTCAAAATTTTCCTAATTTCACACCCACTTTGCCTTTTCAATTCTCCCCTTCTCATCACCAACTTATTTATACTTCATCTTCAACAACTCATCCATCGTGTTCCGGGTTTCGTTCCGATGAGCTCGATCCCCACCCGACCCGATCCGATTCGAGAATTTCTTGCCCTAGGGTTATGGATAAAGATCATGTAATCGAAGCTGCTGGGTTTTCAGATGAGGGCCAGTTGAATTTCGGTCTTCGTCAACCTCGGCCGAAGGAGGAGGAGGACGACGACGACAACGGCGGTCGGGATGAGACCGGGGCGGCTACCGGTTGCAAGAGGAGGAAAACTGATGATGAAAAATCAATACAATTTTACCATCTTCATCATCACCATATCCAATCAGAGGTAATTGGAATTAGCTCTAGCCAATTGCATGATGTGGATCTTGAGCTCAGGCTTGGGGGTCTCTCTAAAGGT

mRNA sequence

ATGTGGACTAAGCAGAGACATGATTTTGATTTCGATGATTCTTCTGCAACCAAAACCAAAAGCAGTTTTGAATATAATGAGTCGTGGGAAGAGCAAGCTTTTGCAGAAGATGCCGCCGCCGCTGGCCGCCTTGGGGGCTGCGTTTGGCCGCCGAGATCTTATTCTTGCAGTTTCTGTAGAAGAGAATTCCGGTCAGCTCAAGCCCTGGGAGGCCATATGAATGTCCATAGGAGAGATAGGGCTAGATTAAAACAATCCCCAAACCCTCAAAATTTTCCTAATTTCACACCCACTTTGCCTTTTCAATTCTCCCCTTCTCATCACCAACTTATTTATACTTCATCTTCAACAACTCATCCATCGTGTTCCGGGTTTCGTTCCGATGAGCTCGATCCCCACCCGACCCGATCCGATTCGAGAATTTCTTGCCCTAGGGTTATGGATAAAGATCATGTAATCGAAGCTGCTGGGTTTTCAGATGAGGGCCAGTTGAATTTCGGTCTTCGTCAACCTCGGCCGAAGGAGGAGGAGGACGACGACGACAACGGCGGTCGGGATGAGACCGGGGCGGCTACCGGTTGCAAGAGGAGGAAAACTGATGATGAAAAATCAATACAATTTTACCATCTTCATCATCACCATATCCAATCAGAGGTAATTGGAATTAGCTCTAGCCAATTGCATGATGTGGATCTTGAGCTCAGGCTTGGGGGTCTCTCTAAAGGT

Coding sequence (CDS)

ATGTGGACTAAGCAGAGACATGATTTTGATTTCGATGATTCTTCTGCAACCAAAACCAAAAGCAGTTTTGAATATAATGAGTCGTGGGAAGAGCAAGCTTTTGCAGAAGATGCCGCCGCCGCTGGCCGCCTTGGGGGCTGCGTTTGGCCGCCGAGATCTTATTCTTGCAGTTTCTGTAGAAGAGAATTCCGGTCAGCTCAAGCCCTGGGAGGCCATATGAATGTCCATAGGAGAGATAGGGCTAGATTAAAACAATCCCCAAACCCTCAAAATTTTCCTAATTTCACACCCACTTTGCCTTTTCAATTCTCCCCTTCTCATCACCAACTTATTTATACTTCATCTTCAACAACTCATCCATCGTGTTCCGGGTTTCGTTCCGATGAGCTCGATCCCCACCCGACCCGATCCGATTCGAGAATTTCTTGCCCTAGGGTTATGGATAAAGATCATGTAATCGAAGCTGCTGGGTTTTCAGATGAGGGCCAGTTGAATTTCGGTCTTCGTCAACCTCGGCCGAAGGAGGAGGAGGACGACGACGACAACGGCGGTCGGGATGAGACCGGGGCGGCTACCGGTTGCAAGAGGAGGAAAACTGATGATGAAAAATCAATACAATTTTACCATCTTCATCATCACCATATCCAATCAGAGGTAATTGGAATTAGCTCTAGCCAATTGCATGATGTGGATCTTGAGCTCAGGCTTGGGGGTCTCTCTAAAGGT

Protein sequence

MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLIYTSSSTTHPSCSGFRSDELDPHPTRSDSRISCPRVMDKDHVIEAAGFSDEGQLNFGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLSKG
Homology
BLAST of MS019758 vs. NCBI nr
Match: XP_022145654.1 (transcriptional regulator SUPERMAN-like [Momordica charantia])

HSP 1 Score: 485.0 bits (1247), Expect = 3.9e-133
Identity = 236/242 (97.52%), Postives = 239/242 (98.76%), Query Frame = 0

Query: 1   MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCR 60
           MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCR
Sbjct: 1   MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCR 60

Query: 61  REFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLIYTSSSTTHP 120
           REFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLI TSSSTTHP
Sbjct: 61  REFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLISTSSSTTHP 120

Query: 121 SCSGFRSDELDPHPTRSDSRISCPRVMDKDHVIEAAGFSDEGQLNFGLRQPRPKEEEDDD 180
           SCSGF SDELDP PTRSDSRISCPRVMDKDHVIEAAGFS+EGQLNFGLRQPRP+EEEDDD
Sbjct: 121 SCSGFCSDELDPRPTRSDSRISCPRVMDKDHVIEAAGFSNEGQLNFGLRQPRPEEEEDDD 180

Query: 181 DNGGRDETGAATGCKRRKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLS 240
           DNGGRDETGAATGCK+RKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLS
Sbjct: 181 DNGGRDETGAATGCKKRKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLS 240

Query: 241 KG 243
           KG
Sbjct: 241 KG 242

BLAST of MS019758 vs. NCBI nr
Match: XP_038905404.1 (zinc finger protein 11-like [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 5.7e-60
Identity = 158/276 (57.25%), Postives = 177/276 (64.13%), Query Frame = 0

Query: 1   MWTKQ-------RHDFDFDDSSATKTKSSFEYNE--SWEEQAFAEDAAAAGRLGGCVWPP 60
           MW KQ       R DFD D+   +KTK+ F+Y E  SWEEQAFAED   AGRLG CVWPP
Sbjct: 1   MWRKQEEEEERERDDFD-DNFEGSKTKTCFQYEESLSWEEQAFAED---AGRLGACVWPP 60

Query: 61  RSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLI 120
            SYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPN  N PNFT T    +S +   L 
Sbjct: 61  TSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNNNNNPNFTTT---DYSLT---LF 120

Query: 121 YTSSSTTHPSCSGFRSDEL-DPHPT-----RSDSRI--------SCPRVMDKDHVIEAAG 180
            + SS++H   S      L +P+P+     RSDS+         SC RV DKDHV    G
Sbjct: 121 QSRSSSSHHHLSSLPDYHLPNPNPSLPDGGRSDSKAGKDEELINSCSRVRDKDHV--GIG 180

Query: 181 FSDEGQLNFGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDEKS--IQFY------- 240
             DEG LNFG  + RP     DDD  GRD+ GA TGCKRRKTDD  +  IQFY       
Sbjct: 181 VPDEG-LNFGFGRSRPTSGLFDDD--GRDDAGAVTGCKRRKTDDATTSPIQFYVKSSSLV 240

Query: 241 --HLHHHHIQSEVIGISSSQLHDVDLELRLGGLSKG 243
             H  HHHIQSEVIG+ S+ LHD+DLELRLGGLSKG
Sbjct: 241 ENHHQHHHIQSEVIGLRSTSLHDLDLELRLGGLSKG 261

BLAST of MS019758 vs. NCBI nr
Match: KAG6580524.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.9 bits (551), Expect = 2.0e-52
Identity = 149/275 (54.18%), Postives = 160/275 (58.18%), Query Frame = 0

Query: 1   MWTKQ---RHDFDFDD-----SSATKTKSSFEYNE--SWEEQAFAEDAAAAGRLGGCVWP 60
           MW KQ   R   D DD     SS TKTK+ F Y +  SWEEQAFAED  AAG LGGCVWP
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFAYEDPFSWEEQAFAED--AAGGLGGCVWP 60

Query: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQL 120
           PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPN  N   FT + PFQ SPS    
Sbjct: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQ-SPSSSTF 120

Query: 121 IY----TSSSTTHPSCSGFRSDELDPHPTRSDSRI--------SCPRVMDKDHVIEAAGF 180
            Y          HP           P P R  S+         SC RV D DHV    G 
Sbjct: 121 SYHLPTPKPYLVHP-----------PPPNRLTSKAGKDENLTNSCSRVRDNDHV--GIGI 180

Query: 181 SDEGQLNFGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDE-KSIQFY-------HL 240
            D+G LNF    P P     DDD GGR+E G  T CK+RKTDDE  SIQ Y         
Sbjct: 181 LDDG-LNFSFGPPWPTSGLFDDD-GGREEAGTDTSCKKRKTDDETSSIQLYVNSNNSVEN 240

BLAST of MS019758 vs. NCBI nr
Match: XP_022934167.1 (probable transcriptional regulator RABBIT EARS [Cucurbita moschata])

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-52
Identity = 149/275 (54.18%), Postives = 160/275 (58.18%), Query Frame = 0

Query: 1   MWTKQ---RHDFDFDD-----SSATKTKSSFEYNE--SWEEQAFAEDAAAAGRLGGCVWP 60
           MW KQ   R   D DD     SS TKTK+ F Y +  SWEEQAFAED  AAG LGGCVWP
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFGYEDPFSWEEQAFAED--AAGGLGGCVWP 60

Query: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQL 120
           PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPN  N   FT + PFQ SPS    
Sbjct: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQ-SPSSSTF 120

Query: 121 IY----TSSSTTHPSCSGFRSDELDPHPTRSDSRI--------SCPRVMDKDHVIEAAGF 180
            Y          HP           P P R  S+         SC RV D DHV    G 
Sbjct: 121 SYHLPTPKPYLVHP-----------PPPNRLTSKAGKDENLTNSCSRVRDNDHV--GIGI 180

Query: 181 SDEGQLNFGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDE-KSIQFY-------HL 240
            D+G LNF    P P     DDD GGR+E G  T CK+RKTDDE  SIQ Y         
Sbjct: 181 LDDG-LNFSFGPPWPASGLFDDD-GGREEAGTDTSCKKRKTDDETSSIQLYVKSNNSVEN 240

BLAST of MS019758 vs. NCBI nr
Match: KAG7017274.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-52
Identity = 149/275 (54.18%), Postives = 160/275 (58.18%), Query Frame = 0

Query: 1   MWTKQ---RHDFDFDD-----SSATKTKSSFEYNE--SWEEQAFAEDAAAAGRLGGCVWP 60
           MW KQ   R   D DD     SS TKTK+ F Y +  SWEEQAFAED  AAG LGGCVWP
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFGYEDPFSWEEQAFAED--AAGGLGGCVWP 60

Query: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQL 120
           PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPN  N   FT + PFQ SPS    
Sbjct: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQ-SPSSSTF 120

Query: 121 IY----TSSSTTHPSCSGFRSDELDPHPTRSDSRI--------SCPRVMDKDHVIEAAGF 180
            Y          HP           P P R  S+         SC RV D DHV    G 
Sbjct: 121 SYHLPTPKPYLVHP-----------PPPNRLTSKAGKDENSTNSCTRVRDNDHV--GIGI 180

Query: 181 SDEGQLNFGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDE-KSIQFY-------HL 240
            D+G LNF    P P     DDD GGR+E G  T CK+RKTDDE  SIQ Y         
Sbjct: 181 LDDG-LNFSFGPPWPASGLFDDD-GGREEAGTDTSCKKRKTDDETSSIQLYVKSNNSVEN 240

BLAST of MS019758 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-20
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0

Query: 28  SWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSP 87
           SWEE AFAED AA     G +WPPRSY+CSFCRREF+SAQALGGHMNVHRRDRARLKQ+ 
Sbjct: 18  SWEELAFAEDDAA-----GSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQAD 77

Query: 88  NPQNFPNFTPTLPFQFSPSH 108
           +   FP  + +  +   PSH
Sbjct: 78  DQYLFPKSSSSPEY---PSH 89

BLAST of MS019758 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-18
Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 30 EEQAFAEDAAAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLK-QSPN 89
          EE+AFA  A   G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS +
Sbjct: 32 EERAFA-SAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS 91

Query: 90 PQNFPNFTP 98
          P +    TP
Sbjct: 92 PSSTDQATP 99

BLAST of MS019758 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 46  GCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLK--QSPN-------PQNFPNFT 105
           G  WPPRSY+CSFC+REFRSAQALGGHMNVHRRDRARL+  QSP+       P   PN++
Sbjct: 39  GFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYS 98

Query: 106 PTLPFQFSPSHHQLIYTSSSTTHPSCSGFRS 128
            +      P HH  +    + + PS   +R+
Sbjct: 99  YSTMANSPPPHHSPLTLFPTLSPPSSPRYRA 129

BLAST of MS019758 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-14
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 0

Query: 49  WPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHH 108
           WPP++Y+CSFCRREFRSAQALGGHMNVHRRDRA+L+Q P+            + F P HH
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS------------WLFEPHHH 103

Query: 109 QLIYT-SSSTTHPSCSGFRSDELDPHPTRSDSR 141
             I   + + +  S S   +  L+P  T   S+
Sbjct: 104 TPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSK 124

BLAST of MS019758 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.1e-08
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0

Query: 52 RSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQ 86
          RSY CSFC R F +AQALGGHMN+HRRDRA+L+Q
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ 66

BLAST of MS019758 vs. ExPASy TrEMBL
Match: A0A6J1CVW0 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015051 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133
Identity = 236/242 (97.52%), Postives = 239/242 (98.76%), Query Frame = 0

Query: 1   MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCR 60
           MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCR
Sbjct: 1   MWTKQRHDFDFDDSSATKTKSSFEYNESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCR 60

Query: 61  REFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLIYTSSSTTHP 120
           REFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLI TSSSTTHP
Sbjct: 61  REFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLISTSSSTTHP 120

Query: 121 SCSGFRSDELDPHPTRSDSRISCPRVMDKDHVIEAAGFSDEGQLNFGLRQPRPKEEEDDD 180
           SCSGF SDELDP PTRSDSRISCPRVMDKDHVIEAAGFS+EGQLNFGLRQPRP+EEEDDD
Sbjct: 121 SCSGFCSDELDPRPTRSDSRISCPRVMDKDHVIEAAGFSNEGQLNFGLRQPRPEEEEDDD 180

Query: 181 DNGGRDETGAATGCKRRKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLS 240
           DNGGRDETGAATGCK+RKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLS
Sbjct: 181 DNGGRDETGAATGCKKRKTDDEKSIQFYHLHHHHIQSEVIGISSSQLHDVDLELRLGGLS 240

Query: 241 KG 243
           KG
Sbjct: 241 KG 242

BLAST of MS019758 vs. ExPASy TrEMBL
Match: A0A6J1F1X7 (probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=LOC111441415 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 149/275 (54.18%), Postives = 160/275 (58.18%), Query Frame = 0

Query: 1   MWTKQ---RHDFDFDD-----SSATKTKSSFEYNE--SWEEQAFAEDAAAAGRLGGCVWP 60
           MW KQ   R   D DD     SS TKTK+ F Y +  SWEEQAFAED  AAG LGGCVWP
Sbjct: 1   MWRKQQEERQTHDCDDSVDSQSSKTKTKTPFGYEDPFSWEEQAFAED--AAGGLGGCVWP 60

Query: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQL 120
           PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPN  N   FT + PFQ SPS    
Sbjct: 61  PRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNTPNHNPFTNSFPFQ-SPSSSTF 120

Query: 121 IY----TSSSTTHPSCSGFRSDELDPHPTRSDSRI--------SCPRVMDKDHVIEAAGF 180
            Y          HP           P P R  S+         SC RV D DHV    G 
Sbjct: 121 SYHLPTPKPYLVHP-----------PPPNRLTSKAGKDENLTNSCSRVRDNDHV--GIGI 180

Query: 181 SDEGQLNFGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDE-KSIQFY-------HL 240
            D+G LNF    P P     DDD GGR+E G  T CK+RKTDDE  SIQ Y         
Sbjct: 181 LDDG-LNFSFGPPWPASGLFDDD-GGREEAGTDTSCKKRKTDDETSSIQLYVKSNNSVEN 240

BLAST of MS019758 vs. ExPASy TrEMBL
Match: A0A5A7TLB0 (Putative nucleic acid binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001450 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 145/268 (54.10%), Postives = 163/268 (60.82%), Query Frame = 0

Query: 4   KQRHDFDFDDSSATKTKSSFEYNE----SWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFC 63
           +++ DFD  +   +KTK+SF+Y +    SWEEQAFAEDAA   RLG CVWPP SYSCSFC
Sbjct: 16  REKDDFDDINVEVSKTKTSFQYEDHSLLSWEEQAFAEDAA---RLGPCVWPPTSYSCSFC 75

Query: 64  RREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPT--LPFQFSPSHHQLIYTSSST 123
           RREFRSAQALGGHMNVHRRDRA L QS    N PNF  T  L    SPS     +  S+ 
Sbjct: 76  RREFRSAQALGGHMNVHRRDRAMLNQSSINNNNPNFASTNCLSLFQSPSSSSSHHYLSTL 135

Query: 124 THP--------SCSGFRSDELDPHPTRSDSRISCPRVMDKDHVIEAAGFSDEGQLNFGLR 183
            +P        SC G RS +L       D R SC RV DK  V    G  DEG LNFG  
Sbjct: 136 PNPNPSFGVTASCGG-RSKDLG-----KDVRSSCSRVRDKHQV--GIGVFDEG-LNFGFG 195

Query: 184 QPRPKEE----EDDDDNGGRDETGAATGCKRRKTDDEKS-IQFY----------HLHHHH 243
           + R         DDD    +D+ G   GCKRRKTDDE S IQFY          H HHHH
Sbjct: 196 RSRTTTSGLFYHDDD----QDDPGVVAGCKRRKTDDETSPIQFYVKSSNLVENQHHHHHH 255

BLAST of MS019758 vs. ExPASy TrEMBL
Match: A0A1S4DV71 (uncharacterized protein LOC103487126 OS=Cucumis melo OX=3656 GN=LOC103487126 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 145/268 (54.10%), Postives = 163/268 (60.82%), Query Frame = 0

Query: 4   KQRHDFDFDDSSATKTKSSFEYNE----SWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFC 63
           +++ DFD  +   +KTK+SF+Y +    SWEEQAFAEDAA   RLG CVWPP SYSCSFC
Sbjct: 16  REKDDFDDINVEVSKTKTSFQYEDHSLLSWEEQAFAEDAA---RLGPCVWPPTSYSCSFC 75

Query: 64  RREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPT--LPFQFSPSHHQLIYTSSST 123
           RREFRSAQALGGHMNVHRRDRA L QS    N PNF  T  L    SPS     +  S+ 
Sbjct: 76  RREFRSAQALGGHMNVHRRDRAMLNQSSINNNNPNFASTNCLSLFQSPSSSSSHHYLSTL 135

Query: 124 THP--------SCSGFRSDELDPHPTRSDSRISCPRVMDKDHVIEAAGFSDEGQLNFGLR 183
            +P        SC G RS +L       D R SC RV DK  V    G  DEG LNFG  
Sbjct: 136 PNPNPSFGVTASCGG-RSKDLG-----KDVRSSCSRVRDKHQV--GIGVFDEG-LNFGFG 195

Query: 184 QPRPKEE----EDDDDNGGRDETGAATGCKRRKTDDEKS-IQFY----------HLHHHH 243
           + R         DDD    +D+ G   GCKRRKTDDE S IQFY          H HHHH
Sbjct: 196 RSRTTTSGLFYHDDD----QDDPGVVAGCKRRKTDDETSPIQFYVKSSNLVENQHHHHHH 255

BLAST of MS019758 vs. ExPASy TrEMBL
Match: A0A0A0LD32 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733980 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.1e-52
Identity = 146/275 (53.09%), Postives = 162/275 (58.91%), Query Frame = 0

Query: 4   KQRHDFDFDDSSATKTKSSFEYNE----SWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFC 63
           +++ D D  +   +KTK+SF+Y +    SWEEQAFAEDAA   RLG CVWPP SYSCSFC
Sbjct: 16  REKDDLDDVNFEGSKTKTSFQYEDYSLLSWEEQAFAEDAA---RLGPCVWPPTSYSCSFC 75

Query: 64  RREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTL--------PFQFSPSHHQLI 123
           RREFRSAQALGGHMNVHRRDRA L QS N  N PNFT T         P   S SHH L 
Sbjct: 76  RREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQSPSSSSSSHHNLS 135

Query: 124 Y----TSSSTTHPSCSGFRSDELDPHPTRSDSRI--------SCPRVMDKDHVIEAAGFS 183
                  SS    SC G           RSDS+         SC RV DK HV    G  
Sbjct: 136 TLPNPNPSSAVTASCGG-----------RSDSKALGKDVIGSSCSRVRDKHHV--GIGVL 195

Query: 184 DEGQLN---FGLRQPRPKEEEDDDDNGGRDETGAATGCKRRKTDDEKS-IQFY------- 243
           DEG LN   FG  QP        DD+  +D+ G   GCKRRKTDDE S IQFY       
Sbjct: 196 DEG-LNFGGFGPSQPTTSSLFYHDDD--QDDPGVVAGCKRRKTDDETSTIQFYVKSSNLV 255

BLAST of MS019758 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-21
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0

Query: 28  SWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSP 87
           SWEE AFAED AA     G +WPPRSY+CSFCRREF+SAQALGGHMNVHRRDRARLKQ+ 
Sbjct: 18  SWEELAFAEDDAA-----GSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQAD 77

Query: 88  NPQNFPNFTPTLPFQFSPSH 108
           +   FP  + +  +   PSH
Sbjct: 78  DQYLFPKSSSSPEY---PSH 89

BLAST of MS019758 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-19
Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 30 EEQAFAEDAAAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLK-QSPN 89
          EE+AFA  A   G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS +
Sbjct: 32 EERAFA-SAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS 91

Query: 90 PQNFPNFTP 98
          P +    TP
Sbjct: 92 PSSTDQATP 99

BLAST of MS019758 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.8e-18
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0

Query: 26 NESWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRA 82
          +ESWE +AF +D    G + G  WPPRSY+C+FCRREFRSAQALGGHMNVHRRDRA
Sbjct: 20 DESWEVKAFEQD--TKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

BLAST of MS019758 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 46  GCVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLK--QSPN-------PQNFPNFT 105
           G  WPPRSY+CSFC+REFRSAQALGGHMNVHRRDRARL+  QSP+       P   PN++
Sbjct: 39  GFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYS 98

Query: 106 PTLPFQFSPSHHQLIYTSSSTTHPSCSGFRS 128
            +      P HH  +    + + PS   +R+
Sbjct: 99  YSTMANSPPPHHSPLTLFPTLSPPSSPRYRA 129

BLAST of MS019758 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-15
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 0

Query: 49  WPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHH 108
           WPP++Y+CSFCRREFRSAQALGGHMNVHRRDRA+L+Q P+            + F P HH
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS------------WLFEPHHH 103

Query: 109 QLIYT-SSSTTHPSCSGFRSDELDPHPTRSDSR 141
             I   + + +  S S   +  L+P  T   S+
Sbjct: 104 TPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSK 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145654.13.9e-13397.52transcriptional regulator SUPERMAN-like [Momordica charantia][more]
XP_038905404.15.7e-6057.25zinc finger protein 11-like [Benincasa hispida][more]
KAG6580524.12.0e-5254.18Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022934167.12.6e-5254.18probable transcriptional regulator RABBIT EARS [Cucurbita moschata][more]
KAG7017274.12.6e-5254.18Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
O809424.6e-2065.00Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
Q9LHS94.3e-1871.01Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G... [more]
Q388951.5e-1550.55Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
Q9SLB82.9e-1447.31Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
Q9SR344.1e-0876.47Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CVW01.9e-13397.52transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1F1X71.3e-5254.18probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=... [more]
A0A5A7TLB02.1e-5254.10Putative nucleic acid binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S4DV712.1e-5254.10uncharacterized protein LOC103487126 OS=Cucumis melo OX=3656 GN=LOC103487126 PE=... [more]
A0A0A0LD328.1e-5253.09C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733980 P... [more]
Match NameE-valueIdentityDescription
AT2G37740.13.3e-2165.00zinc-finger protein 10 [more]
AT5G06070.13.1e-1971.01C2H2 and C2HC zinc fingers superfamily protein [more]
AT4G17810.15.8e-1871.43C2H2 and C2HC zinc fingers superfamily protein [more]
AT3G23130.11.1e-1650.55C2H2 and C2HC zinc fingers superfamily protein [more]
AT2G42410.12.1e-1547.31zinc finger protein 11 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 54..76
e-value: 0.0098
score: 25.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 56..76
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 54..81
score: 11.219034
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 50..94
e-value: 1.4E-5
score: 26.8
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 54..78
e-value: 9.5E-6
score: 25.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR45801OS07G0101800 PROTEINcoord: 11..238
NoneNo IPR availablePANTHERPTHR45801:SF68CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEINcoord: 11..238
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 51..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS019758.1MS019758.1mRNA