MS019701 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCCCTCTGCACGGCGAGCTACTGCATCAGCGACGCCGGCCGTCCGCCGCGGGGCGCGTACATCAACCTCCACAGTTGGACGGATTCGGACGCGGAGATCGCCAAATCGGCGAGTTCGCGAGCGAGGCGGCGAGTTCTGGTGGCCGATGGAGTGTCGTGCAGGCAAATGTACTTGCGGAGCTACAAATTCTCGAGGAAGGAATCGGTGCCGGAGAAAACGAGGCGGTGTTTGGGGAGAGTGAAGGAGAAGATAGGCGAGAGAAAGAGGAGAAGAGGCGTTAAGAGTAGGAATCGGAAGAGGAAGTGTTTGATCTGGAATTGGAGGAAGATGAAGGAATTTTCGTGCAGTTGTATTCTGTTTGGGATTTTTCGGAGGATTTTGTCGTGTGCTGCGAGTGTAGATGTTGTGGAGCACAGCACTGGAAGAAAT ATGAGCTCCCTCTGCACGGCGAGCTACTGCATCAGCGACGCCGGCCGTCCGCCGCGGGGCGCGTACATCAACCTCCACAGTTGGACGGATTCGGACGCGGAGATCGCCAAATCGGCGAGTTCGCGAGCGAGGCGGCGAGTTCTGGTGGCCGATGGAGTGTCGTGCAGGCAAATGTACTTGCGGAGCTACAAATTCTCGAGGAAGGAATCGGTGCCGGAGAAAACGAGGCGGTGTTTGGGGAGAGTGAAGGAGAAGATAGGCGAGAGAAAGAGGAGAAGAGGCGTTAAGAGTAGGAATCGGAAGAGGAAGTGTTTGATCTGGAATTGGAGGAAGATGAAGGAATTTTCGTGCAGTTGTATTCTGTTTGGGATTTTTCGGAGGATTTTGTCGTGTGCTGCGAGTGTAGATGTTGTGGAGCACAGCACTGGAAGAAAT ATGAGCTCCCTCTGCACGGCGAGCTACTGCATCAGCGACGCCGGCCGTCCGCCGCGGGGCGCGTACATCAACCTCCACAGTTGGACGGATTCGGACGCGGAGATCGCCAAATCGGCGAGTTCGCGAGCGAGGCGGCGAGTTCTGGTGGCCGATGGAGTGTCGTGCAGGCAAATGTACTTGCGGAGCTACAAATTCTCGAGGAAGGAATCGGTGCCGGAGAAAACGAGGCGGTGTTTGGGGAGAGTGAAGGAGAAGATAGGCGAGAGAAAGAGGAGAAGAGGCGTTAAGAGTAGGAATCGGAAGAGGAAGTGTTTGATCTGGAATTGGAGGAAGATGAAGGAATTTTCGTGCAGTTGTATTCTGTTTGGGATTTTTCGGAGGATTTTGTCGTGTGCTGCGAGTGTAGATGTTGTGGAGCACAGCACTGGAAGAAAT MSSLCTASYCISDAGRPPRGAYINLHSWTDSDAEIAKSASSRARRRVLVADGVSCRQMYLRSYKFSRKESVPEKTRRCLGRVKEKIGERKRRRGVKSRNRKRKCLIWNWRKMKEFSCSCILFGIFRRILSCAASVDVVEHSTGRN Homology
BLAST of MS019701 vs. NCBI nr
Match: XP_022145680.1 (uncharacterized protein LOC111015072 [Momordica charantia]) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MS019701 vs. NCBI nr
Match: XP_022934190.1 (uncharacterized protein LOC111441435 [Cucurbita moschata]) HSP 1 Score: 197.2 bits (500), Expect = 9.7e-47 Identity = 106/155 (68.39%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of MS019701 vs. NCBI nr
Match: KAG7017326.1 (hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46 Identity = 105/155 (67.74%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of MS019701 vs. NCBI nr
Match: KAG6580574.1 (hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194.9 bits (494), Expect = 4.8e-46 Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of MS019701 vs. NCBI nr
Match: XP_023528009.1 (uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.1 bits (492), Expect = 8.2e-46 Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of MS019701 vs. ExPASy TrEMBL
Match: A0A6J1CV59 (uncharacterized protein LOC111015072 OS=Momordica charantia OX=3673 GN=LOC111015072 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.3e-75 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MS019701 vs. ExPASy TrEMBL
Match: A0A6J1F6Z2 (uncharacterized protein LOC111441435 OS=Cucurbita moschata OX=3662 GN=LOC111441435 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.7e-47 Identity = 106/155 (68.39%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of MS019701 vs. ExPASy TrEMBL
Match: A0A6J1J8Y5 (uncharacterized protein LOC111482393 OS=Cucurbita maxima OX=3661 GN=LOC111482393 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.0e-46 Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of MS019701 vs. ExPASy TrEMBL
Match: A0A0A0LFM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G735550 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 5.0e-41 Identity = 99/163 (60.74%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of MS019701 vs. ExPASy TrEMBL
Match: A0A5D3DNA8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002000 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40 Identity = 103/164 (62.80%), Postives = 121/164 (73.78%), Query Frame = 0
BLAST of MS019701 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17 Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of MS019701 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 6.6e-09 Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 0
BLAST of MS019701 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.9e-04 Identity = 42/123 (34.15%), Postives = 58/123 (47.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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